Spg015013 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg015013
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold3: 40287285 .. 40292506 (-)
RNA-Seq ExpressionSpg015013
SyntenySpg015013
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGATTACCAAGGCCATGTCTTTGCTGCGAGTGGCTGGAGGATTTCAGAGCTCAGCATCCTCTATCCATGGCGGCCCACTCCACGCCCACTAACCCTCTCCCGCCGGCAATCAACCATCGAAACCCAAAGAATCCCATATTTCTTCGTCAACAACGAGCGACCCCTTCCAAATTCGACTCCCCCGTTCCATCTTCCTCTTCTTCTTCTACAGATGGTAAGCTCATGGAGAGAAGTCCTCATGGAGGACGCATGGACGTGGCAAAGCTGAAGGAAAAGGAAGCGAGCGAGAGAAAGGAGGAGGTCAACAGGAAGATTGCTTCTCAGAAAGCCATTTCGGTGATTTTGCGCAGAGAAGCCACGAAGGCCGTCATTGAGAGGAAGAGAGGCCCCAATAATTCTAAGAAACTGCTTCCGCGGACTGTTCTCGAAGCCCTCCATGAAAGAATCACGGCCTTGCGATGGGAATCTGCGCTCAAGGTCAGTTACTTTTGGTTTTAGGCTGCGTCTCGTCTGACTTTGCTTTTGCTCATATTAGTGTGGAAATTTATAATCGTTTTAGTTACAAGCTCTTGGAAGAAGAAGATATATTGTTTTATTCTTCTCTTGTTTTGGTTATTGCAATTTGTATAGCTAGTGAAATGGCTATATTCGGAATTCAATCAGTTCCTTTCATGTTTGAGTTGAGTGTGATTCATTTAAAGATTTAGTTAGTCTGAAGTTCCGTTCGATTTGACTGCTTTGAGTGCAAAGGAACTGATTGAATCCCAGAAATTGGGTCTTTCTTCATGTAGGAACTAGGAAAGAAGAAGCAAGTTTATCTGATCACGGTTATAAAGATATCTTGGTTTTAATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACAAATAGTAATATATATATATACAAATACTAAACAGAAACCATTTCATTGATATGATAAAATGAGTAGAAACGATAGTCCCATCAGTAAATAATTACCCAAAAAAAAAAAAATACTTCCAATGATAAACGAGAGTAGATAAACTATAATTAAAAAATGAGGAGATAGTTTGCTCCAAGAAATAGCAGAAAGAGAAGTGGATTCAATAAATCAATTGATGTCAAGTTTCTTGTCCGAGAAAATGTGAGCATTGCGTTCCAACCATAAGTTCCAAAAGAAAGCCCAAACATGATAAAAAGTCTTTTTATCCTTTTAAGGGTGATCCATAAGTGATATGGAGATAAGAGAATAAATATTCTCATTCCATGGTTCCTTGAAGAAAGTTCCAGAATTTTGTAGCAAACGTGCTGTTGCTGAAAAGGTGGATTTGTGATTCTGCATCAATCATACACATGGGGCAGCAGCTTGGAGAGATATACAACCAAGAGGATCGCCCTTGTAGCTTGTCAAAAGTGTTGATGCAAGAGTGGCTAAGCTCCCATATAAAAAATTTACCTTTTTGGGATAATGACCCTACCACAACCGGTGATAAAAATCTGTTTTAGAGCCCTGTTCGAATGAGGTAAGAACCTTGGACAAAGACTTTGTAGAGAACTCCAAATTCTAAAGTTAAGCACCATTTTTCCTCACTGACAAAGGTAGCAAAGCGCAAAATAAGCGATGATAAAGAGGCCCAATCCACAATTTCTTCTTCATTAAGGCTTATTCTCAAGAATAAGTTCCAAGAATCTGTAAAGTCATTCCATAATTCACAATAGAGCCTTCCTTTTTGAGAGAGAGATGATATTAACGAGGGAATTGATATTGAAGGCTAGTTCTTCCCAACCAAACATCCTTCCAAAACATATAGTGCAAATACTATTTCCCACCTTGAATCAGTACACATGCGCAACACCAAAAAAGAATAAATATGTATAATAATGGTAAATGTAAAACAAAGACAAGACATGAGAATATCATCTTCAAGGCGTTTGTTGTTTTTATTGTTGTTTTGCTAAATCACCATTGAACCCAAAAGGTTAAATTGATGGGTAACGGTAAATTTAATCTTACATCTGTAGAGTAACATTGATAGGTGAGGGTTGTTGAGGAGGTGCTCTTGCATCCTCCCTTTACGGAGAGAGACAATGTGTTGTGGCAAGCTTGTTTTTTTTTGTTGTGTTTTGGGGTGTTTGACTTGAGAGGAGTAATGGGATCTTTAGGGAAAAAGAGAGATCGGATGAGGAAGTTTGGGAGGTTGTTAGGTTGTTAGGTTTAATACTTCCTTGTGGGCGTCGATCATTAGATCTTTTTGTAATTATGATCCTAGTCTTGTTCTTTTGGATTGGAGGCCCTTTTTGTAGTTATTTTGGACTTCAGTCTTTTAGACTTGTTTTTTGTATGTCTTTGTAGTCTTTCATTTATTCAATGGAAGTTCAGTTTCTTACCAAAAAAAAAACCACTAAGTGGCTTTTCTTGTGCATTAGTAGTCAACTGGAAGAGGACACGTTGGTTTCTCGTCTTTCTGGAGTAGAGTAGCCTTTGTTATTGCTCCCAACAATCTAAAGCTTTGACAGAGATGGGCGAGGGTTGGTGGGGGAGGTGCTCTTGCATTCTCCCTTCTGGGAGAGAGGCAATGTGTTGTGACAAGCTTGTTTTTTTACTGTGTTGTGGGTTTTTTTTTTTTTAAAAAAAAAAAAATAGAAAATAATGTTGTGGGGTGTTTGGCTTGAGAGAAATAATAGGATCTTTAGGTAGGGATAAGGAGAGATCGGTTGAGGAAGTTTGGGAGTTAGTTAGGTTTAACTCTTCCTTATGGGCGTCGGTCACTAGACCTTTTTGTAATTATGATCTTGATCTCGTTCTTTTGGATTGGAGTCCATTTTTGTAGTTTTTTCGGTCTCCTCTTTGGTTTGGGCTTGTTTTTTGTATGCTCTTGTATTCTTTCATTTGTTCAATGAAAGTTCGGTTTCTTATAAAAAAAAAACAATCTAAAACTTTGACTCATAACTTACAACCATGGAATAGATTCGTTCTTTTGTTAATTATAAGCTGCTATTGTCATTTGAGTTTGTTGTTTGTGTCAGAATTTTAGTGAGACGATGATTGTGTAAAGAGTGAATTGTAAGCATGAGAAAACTTAAAACCAGACCACAACATTCTATATTTTAATGATAATGATTGATTTTCTGAAGTACAAGGCCAGAAACTTATGAAAAGCTTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTATGAAAGACTAACACCGTGAGATCTTATAGCTTGTTAAATTAGCATGCAATGTTACATTTAATTCATTGTTAAGAACAAGCAAAATTTAAAACTTTGCCAAGAACTAGCAAATCATCATCTTAGTGAGCAAGTTTTTGTGTATTTCAGGTTTTTGAACTACTACGCGAACAATTGTGGTACAGACCTTACGCTGGGATGTACATTAAGCTAATTGTCATGCTTGGAAAATGTAAGCAACCTGAAAAAGCTTACGAGCTGTTCCAAGAAATGATTGACGAAGGCTGTGAAGTTAGCCATGAGTCATATACTGCTCTCTTGTCGGCCTATAGCAGGAGTGGTCTTCTTGACAAAGCATTTTTGCTCCTCGACGAGATGAAAAACAGTCCTGGTTGCCAACCTGATGTTCACACTTATTCTATCCTCATAAAATCATGCTTGCAGGTGTTTGCATTCAACAAAGCACAAACTCTACTCTCTGACATGGTGACTCGAGGAATAAAACCCAGCACTATTACATATAATACCTTCATTGATGCATATGGCAAAGCAAAAATGTATTCTGACCTGCCTGCCTTTTGAGAACATAATAAATGATTCATCTGGTTGCTGACTGAACTATGCTTAAATTTGAGAACTATAATTAACTTCACTTTTAGATGGATCTTATATCTTTCGAGGCAGCCTAGAACCTACCACAACCAATTCACTTCATTATTTCCCCCATAGTCAACTACTAGAAGTTAAAATTGGTTATAACTAGTGTAAGGGCTTAGGATGTTCAAGAGAAGTTCTTCGAAGTCTTGGGTTCAAGTTTTCAGGTGTAGAGTTTAATGAATGAAATTTTTTGGTCTCTTGGAGCTAGCATGGGGTGTGTGAAGTCTCCTTGTGTAGTAGAGGGGTATTTGGCCCAATACCTCGGCTATTAAAGCAAAATGGCTTCATCTTTTATGCTTGTGCCCTAGTTCTGCTCCTCTATATCCTGGTTGTTATCAATGTCTCTGCAACTAAGATATATCATGGTTTTCTTTCCAGTGCAAGCCAACATTTGTCCCCTTAGTCAAACAAGAAATCAATTCTCTCTCTCTTCATTGCATTCTTCCATCACATTGTTGGCAACCAGATGAATGTTGCTGTTAGCATTGTAGAAAACTGATTTCTTTTTATATGTATATAATTCTGCAGGTTTGCTGAAATGGAGTCCATCCTGGTCAAAATGCTGAGCGAAGATGGTTGTCAGCCGGACGTTTGGACCATGAACTCAACGCTTCGAGCCTTCGGCAGCAGCGGACAACTAGAGACCATGGAGAAGTGTTATGAAAAGTTTCAGGGAGCTGGAATCCAACCAAACATTCAGACCTTCAACATCCTTCTGGATTCATACGGCAAGGCTGGAAGTTATGACAAAATGAGTGCTGTGATGGAGTATATGCAGAAGTACCATTATTCATGGACAATTGTAACCTACAACGTCGTTATCGACGCGTTCGGGAGGGCTGGGAATTTGAAACAAATGGAGTATCTATTTCGACTTATGAGATCAGAGAGGATCAAACCGAGTTGTGTAACACTTTGCTCGCTCGTGAGGGCATATGGGAAAGCGGGAAAACGCGAAAAAATCGACAGTGTACTGCAGATAGTTGAGAATTCCGATACAATGCTGGATACCGTATTTTTCAACTGTCTTGTGGACGCTTACGGGCGGATGGGATGTTTTGCAGAGATGAAGGGGGTGCTCGGGATGATGGAGCAGAGAGGATGCAAGCCTGATAAGACTACTTACAGGACCATGGCTAGAGCCTATTCAGATGGTGGAATGGCTAACCATGCCAGGGAGATCCAAGATCTTATAAGCTCTGTAGAAGCAAGTAAGAGAACTCGACCTGACTTGTGATAGTAATTTTCTCGGTCCACATTTTTTATACTTGTTATATGTTGTCGCTTTGCACCATTTGGTTATTTGTAATTTAATGATTTTAAAGGGAAGAATAAAATAAAATGATGAATGGTTCACAAC

mRNA sequence

ATGGCGGCCCACTCCACGCCCACTAACCCTCTCCCGCCGGCAATCAACCATCGAAACCCAAAGAATCCCATATTTCTTCGTCAACAACGAGCGACCCCTTCCAAATTCGACTCCCCCGTTCCATCTTCCTCTTCTTCTTCTACAGATGGTAAGCTCATGGAGAGAAGTCCTCATGGAGGACGCATGGACGTGGCAAAGCTGAAGGAAAAGGAAGCGAGCGAGAGAAAGGAGGAGGTCAACAGGAAGATTGCTTCTCAGAAAGCCATTTCGGTGATTTTGCGCAGAGAAGCCACGAAGGCCGTCATTGAGAGGAAGAGAGGCCCCAATAATTCTAAGAAACTGCTTCCGCGGACTGTTCTCGAAGCCCTCCATGAAAGAATCACGGCCTTGCGATGGGAATCTGCGCTCAAGGTTTTTGAACTACTACGCGAACAATTGTGGTACAGACCTTACGCTGGGATGTACATTAAGCTAATTGTCATGCTTGGAAAATGTAAGCAACCTGAAAAAGCTTACGAGCTGTTCCAAGAAATGATTGACGAAGGCTGTGAAGTTAGCCATGAGTCATATACTGCTCTCTTGTCGGCCTATAGCAGGAGTGGTCTTCTTGACAAAGCATTTTTGCTCCTCGACGAGATGAAAAACAGTCCTGGTTGCCAACCTGATGTTCACACTTATTCTATCCTCATAAAATCATGCTTGCAGGTGTTTGCATTCAACAAAGCACAAACTCTACTCTCTGACATGGTGACTCGAGGAATAAAACCCAGCACTATTACATATAATACCTTCATTGATGCATATGGCAAAGCAAAAATGTATTCTGACCTGCCTGCCTTTTGA

Coding sequence (CDS)

ATGGCGGCCCACTCCACGCCCACTAACCCTCTCCCGCCGGCAATCAACCATCGAAACCCAAAGAATCCCATATTTCTTCGTCAACAACGAGCGACCCCTTCCAAATTCGACTCCCCCGTTCCATCTTCCTCTTCTTCTTCTACAGATGGTAAGCTCATGGAGAGAAGTCCTCATGGAGGACGCATGGACGTGGCAAAGCTGAAGGAAAAGGAAGCGAGCGAGAGAAAGGAGGAGGTCAACAGGAAGATTGCTTCTCAGAAAGCCATTTCGGTGATTTTGCGCAGAGAAGCCACGAAGGCCGTCATTGAGAGGAAGAGAGGCCCCAATAATTCTAAGAAACTGCTTCCGCGGACTGTTCTCGAAGCCCTCCATGAAAGAATCACGGCCTTGCGATGGGAATCTGCGCTCAAGGTTTTTGAACTACTACGCGAACAATTGTGGTACAGACCTTACGCTGGGATGTACATTAAGCTAATTGTCATGCTTGGAAAATGTAAGCAACCTGAAAAAGCTTACGAGCTGTTCCAAGAAATGATTGACGAAGGCTGTGAAGTTAGCCATGAGTCATATACTGCTCTCTTGTCGGCCTATAGCAGGAGTGGTCTTCTTGACAAAGCATTTTTGCTCCTCGACGAGATGAAAAACAGTCCTGGTTGCCAACCTGATGTTCACACTTATTCTATCCTCATAAAATCATGCTTGCAGGTGTTTGCATTCAACAAAGCACAAACTCTACTCTCTGACATGGTGACTCGAGGAATAAAACCCAGCACTATTACATATAATACCTTCATTGATGCATATGGCAAAGCAAAAATGTATTCTGACCTGCCTGCCTTTTGA

Protein sequence

MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDLPAF
Homology
[Close]
BLAST of Spg015013 vs. NCBI nr
Match: XP_022991692.1 (pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Cucurbita maxima])

HSP 1 Score: 478.0 bits (1229), Expect = 5.5e-131
Identity = 245/277 (88.45%), Postives = 261/277 (94.22%), Query Frame = 0 

Query: 1   MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGG 60
           MAAHSTP+  LPPA++H NPKN +FL QQRA+   F+SP PSSSSSSTDGKLM+RSP  G
Sbjct: 17  MAAHSTPSILLPPAVSHSNPKNRVFLCQQRASHHNFESPAPSSSSSSTDGKLMQRSPREG 76

Query: 61  RMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVL 120
           RMD+AKLK KEA ERKEEVNRKIASQKAISVILRREATKAVIERKRGP NSKKLLPRTVL
Sbjct: 77  RMDIAKLKAKEAGERKEEVNRKIASQKAISVILRREATKAVIERKRGPTNSKKLLPRTVL 136

Query: 121 EALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMID 180
           EALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMI+
Sbjct: 137 EALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIE 196

Query: 181 EGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFN 240
           EGCEVSHESYTALLSAYSRSGLLD+AF LL+EMKNSP CQPDVHTYSILIKSCLQVFAFN
Sbjct: 197 EGCEVSHESYTALLSAYSRSGLLDRAFSLLNEMKNSPDCQPDVHTYSILIKSCLQVFAFN 256

Query: 241 KAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL 278
           KAQTLLSDMVTRGIKP+TITYNTFIDAYGKAKM++++
Sbjct: 257 KAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMFAEM 293

[Close]
BLAST of Spg015013 vs. NCBI nr
Match: XP_038877300.1 (pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Benincasa hispida])

HSP 1 Score: 477.6 bits (1228), Expect = 7.2e-131
Identity = 249/279 (89.25%), Postives = 260/279 (93.19%), Query Frame = 0 

Query: 1   MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSS--TDGKLMERSPH 60
           MAAHSTPTNPLPPAINH NP N +F RQQRAT  KF SP  SSSSSS  +DGKLMERSP 
Sbjct: 1   MAAHSTPTNPLPPAINHPNPNNHVFPRQQRATHPKFQSPSLSSSSSSSTSDGKLMERSPR 60

Query: 61  GGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRT 120
            GRMDVAKLK KEA ERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRT
Sbjct: 61  EGRMDVAKLKAKEAGERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRT 120

Query: 121 VLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEM 180
           VLEALHERITALRWESALKVFELLREQLWYRPY GMYIKLIVMLGKCKQPEKAYELFQEM
Sbjct: 121 VLEALHERITALRWESALKVFELLREQLWYRPYPGMYIKLIVMLGKCKQPEKAYELFQEM 180

Query: 181 IDEGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFA 240
           I+EGCEVSHESYTALLSAYSRSGLLDKAF +L+EMKNSP CQPDVHTYSIL+KSCLQVFA
Sbjct: 181 IEEGCEVSHESYTALLSAYSRSGLLDKAFSILNEMKNSPDCQPDVHTYSILMKSCLQVFA 240

Query: 241 FNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL 278
           FNKAQTLLSDMVTRGIKP+TITYN FIDAYGKAKM++++
Sbjct: 241 FNKAQTLLSDMVTRGIKPNTITYNIFIDAYGKAKMFAEM 279

[Close]
BLAST of Spg015013 vs. NCBI nr
Match: KAG6575982.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 475.7 bits (1223), Expect = 2.7e-130
Identity = 243/277 (87.73%), Postives = 260/277 (93.86%), Query Frame = 0 

Query: 1   MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGG 60
           MAAHSTP+  LPPA++H NPKN +FL QQRA+   F+SP PSSSSSSTDGKLM+RSP  G
Sbjct: 624 MAAHSTPSILLPPAVSHSNPKNRVFLCQQRASHHNFESPAPSSSSSSTDGKLMQRSPREG 683

Query: 61  RMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVL 120
           RMD+ KLK KEA ERKEEVNRKIASQKAISVILRREATKAVIERKRGP NSKKLLPRTVL
Sbjct: 684 RMDITKLKAKEAGERKEEVNRKIASQKAISVILRREATKAVIERKRGPTNSKKLLPRTVL 743

Query: 121 EALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMID 180
           EALHERITALRWESALKVFELLREQ+WYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMI+
Sbjct: 744 EALHERITALRWESALKVFELLREQMWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIE 803

Query: 181 EGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFN 240
           EGCEVSHESYTALLSAYSRSGLLD+AF LL+EMKNSP CQPDVHTYSILIKSCLQVFAFN
Sbjct: 804 EGCEVSHESYTALLSAYSRSGLLDRAFSLLNEMKNSPDCQPDVHTYSILIKSCLQVFAFN 863

Query: 241 KAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL 278
           KAQTLLSDMVTRGIKP+TITYNTFIDAYGKAKM++++
Sbjct: 864 KAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMFAEM 900

[Close]
BLAST of Spg015013 vs. NCBI nr
Match: XP_023549189.1 (pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 474.6 bits (1220), Expect = 6.1e-130
Identity = 243/277 (87.73%), Postives = 261/277 (94.22%), Query Frame = 0 

Query: 1   MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGG 60
           MAAHSTP+  LPPA++H NPKN +FL QQRA+   F+SP PSSSSSSTDGKLM+RSP  G
Sbjct: 17  MAAHSTPSILLPPAVSHSNPKNRVFLCQQRASHPNFESPAPSSSSSSTDGKLMQRSPREG 76

Query: 61  RMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVL 120
           RMD+AKLK KEA ERKEEVNRKIASQKAISVILRREATKAVIERKRGP NSKKLLPRTVL
Sbjct: 77  RMDIAKLKAKEAGERKEEVNRKIASQKAISVILRREATKAVIERKRGPTNSKKLLPRTVL 136

Query: 121 EALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMID 180
           EALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMI+
Sbjct: 137 EALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIE 196

Query: 181 EGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFN 240
           EGCEVSHESYTALLSAYSRSGLLD+AF LL+EMKNSP CQPDVHTYSILIKSCLQVFAF+
Sbjct: 197 EGCEVSHESYTALLSAYSRSGLLDRAFSLLNEMKNSPDCQPDVHTYSILIKSCLQVFAFS 256

Query: 241 KAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL 278
           +AQTLLSDMVTRGIKP+TITYNTFIDAYGKAKM++++
Sbjct: 257 EAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMFAEM 293

[Close]
BLAST of Spg015013 vs. NCBI nr
Match: XP_022954169.1 (pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Cucurbita moschata])

HSP 1 Score: 474.2 bits (1219), Expect = 8.0e-130
Identity = 243/277 (87.73%), Postives = 260/277 (93.86%), Query Frame = 0 

Query: 1   MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGG 60
           MAAHSTP+  LPPA++H NPKN +FL QQRA+    +SP PSSSSSSTDGKL++RSP  G
Sbjct: 17  MAAHSTPSILLPPAVSHSNPKNRVFLCQQRASHHNLESPAPSSSSSSTDGKLVQRSPREG 76

Query: 61  RMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVL 120
           RMD+AKLK KEA ERKEEVNRKIASQKAISVILRREATKAVIERKRGP NSKKLLPRTVL
Sbjct: 77  RMDIAKLKAKEAGERKEEVNRKIASQKAISVILRREATKAVIERKRGPTNSKKLLPRTVL 136

Query: 121 EALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMID 180
           EALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMI+
Sbjct: 137 EALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIE 196

Query: 181 EGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFN 240
           EGCEVSHESYTALLSAYSRSGLLD+AF LL+EMKNSP CQPDVHTYSILIKSCLQVFAFN
Sbjct: 197 EGCEVSHESYTALLSAYSRSGLLDRAFSLLNEMKNSPDCQPDVHTYSILIKSCLQVFAFN 256

Query: 241 KAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL 278
           KAQTLLSDMVTRGIKP+TITYNTFIDAYGKAKM++++
Sbjct: 257 KAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMFAEM 293

[Close]
BLAST of Spg015013 vs. ExPASy Swiss-Prot
Match: Q9FKC3 (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 313.2 bits (801), Expect = 3.1e-84
Identity = 170/278 (61.15%), Postives = 212/278 (76.26%), Query Frame = 0 

Query: 1   MAAHSTPTNPLPP-AINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHG 60
           M + ST T+  PP   N R  +    +R    +P + +  + S  S++T   L E     
Sbjct: 1   MVSLSTSTSHAPPLPTNRRTAERTFTVRCISISPREPNYAITSDKSNNTSLSLRETRQSK 60

Query: 61  GRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTV 120
             ++   + E+++ E KE+ N KIAS+KAIS+ILRREATK++IE+K+G   SKKLLPRTV
Sbjct: 61  WLINAEDVNERDSKEIKEDKNTKIASRKAISIILRREATKSIIEKKKG---SKKLLPRTV 120

Query: 121 LEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMI 180
           LE+LHERITALRWESA++VFELLREQLWY+P  G+Y+KLIVMLGKCKQPEKA+ELFQEMI
Sbjct: 121 LESLHERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMI 180

Query: 181 DEGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAF 240
           +EGC V+HE YTAL+SAYSRSG  D AF LL+ MK+S  CQPDVHTYSILIKS LQVFAF
Sbjct: 181 NEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAF 240

Query: 241 NKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL 278
           +K Q LLSDM  +GI+P+TITYNT IDAYGKAKM+ ++
Sbjct: 241 DKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEM 275

[Close]
BLAST of Spg015013 vs. ExPASy Swiss-Prot
Match: Q9SCP4 (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX=3702 GN=At3g53170 PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 4.2e-41
Identity = 93/215 (43.26%), Postives = 134/215 (62.33%), Query Frame = 0 

Query: 70  KEASERKEEVNRKIAS-------QKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEA 129
           K  +ER E++N  + S       +K +S ILR +A    IERK        L P+ VLEA
Sbjct: 5   KVPNERTEKMNSGLISTRHQVDPKKELSRILRTDAAVKGIERKANSEKYLTLWPKAVLEA 64

Query: 130 LHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEG 189
           L E I   RW+SALK+F LLR+Q WY P    Y KL  +LG CKQP++A  LF+ M+ EG
Sbjct: 65  LDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEG 124

Query: 190 CEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKA 249
            + + + YT+L+S Y +S LLDKAF  L+ MK+   C+PDV T+++LI  C ++  F+  
Sbjct: 125 LKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLV 184

Query: 250 QTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL 278
           ++++ +M   G+  ST+TYNT ID YGKA M+ ++
Sbjct: 185 KSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEM 219

[Close]
BLAST of Spg015013 vs. ExPASy Swiss-Prot
Match: Q9SQU6 (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2750 PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.3e-37
Identity = 83/189 (43.92%), Postives = 119/189 (62.96%), Query Frame = 0 

Query: 98  TKAVIERKRGPNNSKKLLPR---------TVLEALHERITALRWESALKVFELLREQLWY 157
           T+ V +R+    N KK L R         TV E L + I   +W  AL+VF++LREQ +Y
Sbjct: 61  TEPVNQRRTPIKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFY 120

Query: 158 RPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRSGLLDKAFL 217
           +P  G Y+KL+V+LGK  QP +A +LF EM++EG E + E YTALL+AY+RS L+D AF 
Sbjct: 121 QPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFS 180

Query: 218 LLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAY 277
           +LD+MK+ P CQPDV TYS L+K+C+    F+   +L  +M  R I P+T+T N  +  Y
Sbjct: 181 ILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGY 240

[Close]
BLAST of Spg015013 vs. ExPASy Swiss-Prot
Match: Q9SV96 (Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2453 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.2e-19
Identity = 54/153 (35.29%), Postives = 83/153 (54.25%), Query Frame = 0 

Query: 131 RWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESY 190
           +W   L+VF  +++Q WY P  G+Y KLI ++GK  Q   A  LF EM + GC      Y
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171

Query: 191 TALLSAY----SRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLL 250
            AL++A+     ++  L+K    LD+MK    CQP+V TY+IL+++  Q    ++   L 
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231

Query: 251 SDMVTRGIKPSTITYNTFIDAYGKAKMYSDLPA 280
            D+    + P   T+N  +DAYGK  M  ++ A
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264

[Close]
BLAST of Spg015013 vs. ExPASy Swiss-Prot
Match: Q9SFV9 (Pentatricopeptide repeat-containing protein At3g07290, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g07290 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 9.4e-17
Identity = 54/141 (38.30%), Postives = 80/141 (56.74%), Query Frame = 0 

Query: 130 LRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHES 189
           L    ALKVF+++ +++   P +  Y  LI  L +  + E+A+ L  +M ++GC+ S  +
Sbjct: 244 LNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303

Query: 190 YTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDM 249
           YT L+ A    GL+DKAF L DEM    GC+P+VHTY++LI    +     +A  +   M
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEM-IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 363

Query: 250 VTRGIKPSTITYNTFIDAYGK 271
           V   I PS ITYN  I+ Y K
Sbjct: 364 VKDRIFPSVITYNALINGYCK 383

[Close]
BLAST of Spg015013 vs. ExPASy TrEMBL
Match: A0A6J1JMJ6 (pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111488233 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.7e-131
Identity = 245/277 (88.45%), Postives = 261/277 (94.22%), Query Frame = 0 

Query: 1   MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGG 60
           MAAHSTP+  LPPA++H NPKN +FL QQRA+   F+SP PSSSSSSTDGKLM+RSP  G
Sbjct: 17  MAAHSTPSILLPPAVSHSNPKNRVFLCQQRASHHNFESPAPSSSSSSTDGKLMQRSPREG 76

Query: 61  RMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVL 120
           RMD+AKLK KEA ERKEEVNRKIASQKAISVILRREATKAVIERKRGP NSKKLLPRTVL
Sbjct: 77  RMDIAKLKAKEAGERKEEVNRKIASQKAISVILRREATKAVIERKRGPTNSKKLLPRTVL 136

Query: 121 EALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMID 180
           EALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMI+
Sbjct: 137 EALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIE 196

Query: 181 EGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFN 240
           EGCEVSHESYTALLSAYSRSGLLD+AF LL+EMKNSP CQPDVHTYSILIKSCLQVFAFN
Sbjct: 197 EGCEVSHESYTALLSAYSRSGLLDRAFSLLNEMKNSPDCQPDVHTYSILIKSCLQVFAFN 256

Query: 241 KAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL 278
           KAQTLLSDMVTRGIKP+TITYNTFIDAYGKAKM++++
Sbjct: 257 KAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMFAEM 293

[Close]
BLAST of Spg015013 vs. ExPASy TrEMBL
Match: A0A6J1GS58 (pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456511 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 3.8e-130
Identity = 243/277 (87.73%), Postives = 260/277 (93.86%), Query Frame = 0 

Query: 1   MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGG 60
           MAAHSTP+  LPPA++H NPKN +FL QQRA+    +SP PSSSSSSTDGKL++RSP  G
Sbjct: 17  MAAHSTPSILLPPAVSHSNPKNRVFLCQQRASHHNLESPAPSSSSSSTDGKLVQRSPREG 76

Query: 61  RMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVL 120
           RMD+AKLK KEA ERKEEVNRKIASQKAISVILRREATKAVIERKRGP NSKKLLPRTVL
Sbjct: 77  RMDIAKLKAKEAGERKEEVNRKIASQKAISVILRREATKAVIERKRGPTNSKKLLPRTVL 136

Query: 121 EALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMID 180
           EALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMI+
Sbjct: 137 EALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIE 196

Query: 181 EGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFN 240
           EGCEVSHESYTALLSAYSRSGLLD+AF LL+EMKNSP CQPDVHTYSILIKSCLQVFAFN
Sbjct: 197 EGCEVSHESYTALLSAYSRSGLLDRAFSLLNEMKNSPDCQPDVHTYSILIKSCLQVFAFN 256

Query: 241 KAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL 278
           KAQTLLSDMVTRGIKP+TITYNTFIDAYGKAKM++++
Sbjct: 257 KAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMFAEM 293

[Close]
BLAST of Spg015013 vs. ExPASy TrEMBL
Match: A0A5A7SJF3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00160 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 9.8e-126
Identity = 237/272 (87.13%), Postives = 255/272 (93.75%), Query Frame = 0 

Query: 9   NPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSS---TDGKLMERSPHGGRMDVA 68
           NPLPP INHR+P   +FLR+Q+ T  KF SP PSSSSSS   TDGKL++ SPH GRMDVA
Sbjct: 4   NPLPPPINHRDPNRRLFLRRQQPTYPKFQSPAPSSSSSSTTTTDGKLVKISPHEGRMDVA 63

Query: 69  KLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALHE 128
           KLK KEA+ERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALH+
Sbjct: 64  KLKAKEAAERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALHD 123

Query: 129 RITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEV 188
           RITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAY+LFQEMI+EGCEV
Sbjct: 124 RITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYKLFQEMIEEGCEV 183

Query: 189 SHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTL 248
           SHESYTALLSAYSRSGLLDKAF +L+EMKNSP CQPDVHTYSILIKSCLQVFAFNKAQTL
Sbjct: 184 SHESYTALLSAYSRSGLLDKAFSILNEMKNSPNCQPDVHTYSILIKSCLQVFAFNKAQTL 243

Query: 249 LSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL 278
           LSDMVT+GIKP+TITYNTFIDAYGKAKM++++
Sbjct: 244 LSDMVTQGIKPNTITYNTFIDAYGKAKMFAEM 275

[Close]
BLAST of Spg015013 vs. ExPASy TrEMBL
Match: A0A1S3C6D0 (pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497549 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.3e-125
Identity = 237/272 (87.13%), Postives = 255/272 (93.75%), Query Frame = 0 

Query: 9   NPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSS---TDGKLMERSPHGGRMDVA 68
           NPLPP INHR+P   +FLR+Q+ T  KF SP PSSSSSS   TDGKL++ SPH GRMDVA
Sbjct: 4   NPLPPPINHRDPNKRLFLRRQQPTYPKFQSPAPSSSSSSTTTTDGKLVKISPHEGRMDVA 63

Query: 69  KLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALHE 128
           KLK KEA+ERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALH+
Sbjct: 64  KLKAKEAAERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALHD 123

Query: 129 RITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEV 188
           RITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAY+LFQEMI+EGCEV
Sbjct: 124 RITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYKLFQEMIEEGCEV 183

Query: 189 SHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTL 248
           SHESYTALLSAYSRSGLLDKAF +L+EMKNSP CQPDVHTYSILIKSCLQVFAFNKAQTL
Sbjct: 184 SHESYTALLSAYSRSGLLDKAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTL 243

Query: 249 LSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL 278
           LSDMVT+GIKP+TITYNTFIDAYGKAKM++++
Sbjct: 244 LSDMVTQGIKPNTITYNTFIDAYGKAKMFAEM 275

[Close]
BLAST of Spg015013 vs. ExPASy TrEMBL
Match: A0A6J1CRU5 (pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014179 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 4.1e-124
Identity = 233/277 (84.12%), Postives = 252/277 (90.97%), Query Frame = 0 

Query: 1   MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGG 60
           M  HSTPTNPLP AINHRNP+ P+ L++Q+ +PSK DSP      +S++GKLMER PHGG
Sbjct: 1   MDVHSTPTNPLPLAINHRNPRKPVLLQEQQPSPSKADSP------ASSNGKLMERRPHGG 60

Query: 61  RMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVL 120
           RMDVAKLK  EASERKEEVNRKIASQKAISVILRREATKAVIE+KRGP NSKKLLP+TVL
Sbjct: 61  RMDVAKLKASEASERKEEVNRKIASQKAISVILRREATKAVIEKKRGPTNSKKLLPQTVL 120

Query: 121 EALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMID 180
           EALHER++ALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKA ELF EMID
Sbjct: 121 EALHERVSALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKATELFHEMID 180

Query: 181 EGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFN 240
           EGCEVS ESYTALLSAYSRSGLLDKAF LLDEM+NSP CQPDVHTYSILIKSCLQVFAF 
Sbjct: 181 EGCEVSQESYTALLSAYSRSGLLDKAFSLLDEMRNSPDCQPDVHTYSILIKSCLQVFAFK 240

Query: 241 KAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL 278
           KAQ LLSDMV RGIKP+TITYNTFIDAYGKAKM++++
Sbjct: 241 KAQALLSDMVIRGIKPNTITYNTFIDAYGKAKMFAEM 271

[Close]
BLAST of Spg015013 vs. TAIR 10
Match: AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 313.2 bits (801), Expect = 2.2e-85
Identity = 170/278 (61.15%), Postives = 212/278 (76.26%), Query Frame = 0 

Query: 1   MAAHSTPTNPLPP-AINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHG 60
           M + ST T+  PP   N R  +    +R    +P + +  + S  S++T   L E     
Sbjct: 1   MVSLSTSTSHAPPLPTNRRTAERTFTVRCISISPREPNYAITSDKSNNTSLSLRETRQSK 60

Query: 61  GRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTV 120
             ++   + E+++ E KE+ N KIAS+KAIS+ILRREATK++IE+K+G   SKKLLPRTV
Sbjct: 61  WLINAEDVNERDSKEIKEDKNTKIASRKAISIILRREATKSIIEKKKG---SKKLLPRTV 120

Query: 121 LEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMI 180
           LE+LHERITALRWESA++VFELLREQLWY+P  G+Y+KLIVMLGKCKQPEKA+ELFQEMI
Sbjct: 121 LESLHERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMI 180

Query: 181 DEGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAF 240
           +EGC V+HE YTAL+SAYSRSG  D AF LL+ MK+S  CQPDVHTYSILIKS LQVFAF
Sbjct: 181 NEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAF 240

Query: 241 NKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL 278
           +K Q LLSDM  +GI+P+TITYNT IDAYGKAKM+ ++
Sbjct: 241 DKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEM 275

[Close]
BLAST of Spg015013 vs. TAIR 10
Match: AT3G53170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 169.9 bits (429), Expect = 3.0e-42
Identity = 93/215 (43.26%), Postives = 134/215 (62.33%), Query Frame = 0 

Query: 70  KEASERKEEVNRKIAS-------QKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEA 129
           K  +ER E++N  + S       +K +S ILR +A    IERK        L P+ VLEA
Sbjct: 55  KVPNERTEKMNSGLISTRHQVDPKKELSRILRTDAAVKGIERKANSEKYLTLWPKAVLEA 114

Query: 130 LHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEG 189
           L E I   RW+SALK+F LLR+Q WY P    Y KL  +LG CKQP++A  LF+ M+ EG
Sbjct: 115 LDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEG 174

Query: 190 CEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKA 249
            + + + YT+L+S Y +S LLDKAF  L+ MK+   C+PDV T+++LI  C ++  F+  
Sbjct: 175 LKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLV 234

Query: 250 QTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL 278
           ++++ +M   G+  ST+TYNT ID YGKA M+ ++
Sbjct: 235 KSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEM 269

[Close]
BLAST of Spg015013 vs. TAIR 10
Match: AT3G06430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 158.3 bits (399), Expect = 9.0e-39
Identity = 83/189 (43.92%), Postives = 119/189 (62.96%), Query Frame = 0 

Query: 98  TKAVIERKRGPNNSKKLLPR---------TVLEALHERITALRWESALKVFELLREQLWY 157
           T+ V +R+    N KK L R         TV E L + I   +W  AL+VF++LREQ +Y
Sbjct: 61  TEPVNQRRTPIKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFY 120

Query: 158 RPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRSGLLDKAFL 217
           +P  G Y+KL+V+LGK  QP +A +LF EM++EG E + E YTALL+AY+RS L+D AF 
Sbjct: 121 QPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFS 180

Query: 218 LLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAY 277
           +LD+MK+ P CQPDV TYS L+K+C+    F+   +L  +M  R I P+T+T N  +  Y
Sbjct: 181 ILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGY 240

[Close]
BLAST of Spg015013 vs. TAIR 10
Match: AT4G39620.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 98.6 bits (244), Expect = 8.5e-21
Identity = 54/153 (35.29%), Postives = 83/153 (54.25%), Query Frame = 0 

Query: 131 RWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESY 190
           +W   L+VF  +++Q WY P  G+Y KLI ++GK  Q   A  LF EM + GC      Y
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171

Query: 191 TALLSAY----SRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLL 250
            AL++A+     ++  L+K    LD+MK    CQP+V TY+IL+++  Q    ++   L 
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231

Query: 251 SDMVTRGIKPSTITYNTFIDAYGKAKMYSDLPA 280
            D+    + P   T+N  +DAYGK  M  ++ A
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264

[Close]
BLAST of Spg015013 vs. TAIR 10
Match: AT4G39620.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 98.6 bits (244), Expect = 8.5e-21
Identity = 54/153 (35.29%), Postives = 83/153 (54.25%), Query Frame = 0 

Query: 131 RWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESY 190
           +W   L+VF  +++Q WY P  G+Y KLI ++GK  Q   A  LF EM + GC      Y
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171

Query: 191 TALLSAY----SRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLL 250
            AL++A+     ++  L+K    LD+MK    CQP+V TY+IL+++  Q    ++   L 
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231

Query: 251 SDMVTRGIKPSTITYNTFIDAYGKAKMYSDLPA 280
            D+    + P   T+N  +DAYGK  M  ++ A
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264

The following BLAST results are available for this feature:
BLAST of Spg015013 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022991692.15.5e-13188.45pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Cucurbita ... [more]
XP_038877300.17.2e-13189.25pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Benincasa ... [more]
KAG6575982.12.7e-13087.73Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_023549189.16.1e-13087.73pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Cucurbita ... [more]
XP_022954169.18.0e-13087.73pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Cucurbita ... [more]
BLAST of Spg015013 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FKC33.1e-8461.15Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop... [more]
Q9SCP44.2e-4143.26Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX... [more]
Q9SQU61.3e-3743.92Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidop... [more]
Q9SV961.2e-1935.29Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidop... [more]
Q9SFV99.4e-1738.30Pentatricopeptide repeat-containing protein At3g07290, mitochondrial OS=Arabidop... [more]
BLAST of Spg015013 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JMJ62.7e-13188.45pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Cucurbit... [more]
A0A6J1GS583.8e-13087.73pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Cucurbit... [more]
A0A5A7SJF39.8e-12687.13Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3C6D01.3e-12587.13pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Cucumis ... [more]
A0A6J1CRU54.1e-12484.12pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Momordic... [more]
BLAST of Spg015013 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G48730.12.2e-8561.15Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53170.13.0e-4243.26Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G06430.19.0e-3943.92Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G39620.18.5e-2135.29Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G39620.28.5e-2135.29Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 62..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..79
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 1..277
NoneNo IPR availablePANTHERPTHR47932:SF17OS06G0172000 PROTEINcoord: 1..277
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 60..251
e-value: 9.0E-43
score: 148.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 189..233
e-value: 5.8E-14
score: 52.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 189..223
e-value: 1.9E-8
score: 32.0
coord: 155..186
e-value: 3.3E-6
score: 24.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 158..183
e-value: 1.2E-4
score: 22.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 245..272
e-value: 0.0022
score: 18.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 186..216
score: 9.898111
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 151..185
score: 9.141782
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 222..256
score: 10.248873

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg015013.1Spg015013.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding