Spg014952 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg014952
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold3: 39155215 .. 39157227 (+)
RNA-Seq Expression	Spg014952
Synteny	Spg014952

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCCTGTGTATGGCAAACTGCAGGCCAAACATCTCGAAGAACGCATCCCAAACCGAACTAGCAAAATCACATCTCGAAGAACGTGTATTTGAGCTCTCTTTTGCATTTTGTGATATTCCATGCTGTGTTGGAGGTGATTTTAACATAACTCATTCAATTCATGAAAGGATACCTTGTGGGAAACAAACAAAGGAGATGCGGCAATTTAACAGATTAATTAAAGAAACGGGTCTTATGGAAATTCCACTTTCCAATGGAAAATTTACATGGTCAAAGCTAGGGGATGATAGTTTCCAATCTTTGTTAGATCGGTTCTTCATTTCTAAAGCATGGGATCAACTTTTTGATACTACGAGGGCTTCAAAAAAGGCTCGATAATAAAGCAGAAGTGGAACCTCTTTCTAATCAAGACATAGTGATTCGTGCTACTGCAGAGGGAGATCTTTTTTTATCCATATTTGAAGGAAGAAAGAAATATGATTCATAAAAATAATTTTGGGTGAACTGCAACATCCCCATTAACATCCATTGGTCAATAGTTTCTGAAGAGGATAACTCAGCTCTTATTGCACCATCTGGACAACACTTAAAGATGACATCTTGCTGTTTTGCAAATATAATGATGCTATGTTTAATGTTTTATCTCAAACTATTGCCTTATTTGAATGGAGCTCGGGTTTGATGGTGAATTGGGGAAAATCTACAATTTGTGGCATAAATATTCAAAATAATGAGGTGGCTCTTATGGCTGAAAAGTTGACTTGCAAGGTGGAAAATCTTCCTTTTAATTACCTTGGACTATCCCTTGGAGGTCATCCTAAATCGCCAACTTTTTGGCAACCAGTTGTAGATAAAATCCTTAGGAAATTGGATAGGTGGAGGAAGGATGACTCTTTGTAATTCGTTGTTGTCCAATACTCCTTTATAAAGGACAATGTGATTCAGCTTATCTTAGCTCCTTCATTGCCATTGAAGCCCTTATGCGATCAAAGCCCTTTTGTTCAAGTTATGGTTGGAGAGGAATTCAAGAACTTTTATAATAAAAGTCTTTCATGGTTCGAGCATTTTGAATCCCCTAGCTTAAAAGTGTCTTCCGGGTGCACACTTTCCAAATCTTTTGCAGCTTATTCTCTTCTTGATATTTATCTCCATAGGGATGTATTTATTTCCTTTTAGTTGCTGTATTTTTGTTATTTTGTTGTTCCTTGTTACTTTTTCACTCCCATGTGGAGTTTGTATCTTTAGCATTAGTCTCTTTTCATTTCCTTAATGAAAAGTTATTTCTTGTTAAAAAAAACAAAAACAAAAAAAAGGCACTTTTCAGGCTCCTACCGAAGACTACTTAAGCATGGCAACAAGGAAAAAAACTTTTGTTTGACAATGACTGGCCACAAGTTGTTGATCATAACAAGAAAGCTAAGCCACCTAAATTTATTAACCTACCAGCACCATGACACACAATTTTCTTCCTCTATAAGCCAACCAATATATTTCAACAATATTGTCTCTCCGGTTTGAAGTTTCTTCTACCGAAAGAAAATAACCATCTGCTCGAATCTATTACTCCTAGGGTCTCTGGTAGGCTTTTTAACACTGCATTCAACCATTGGTAAATGTGGAGGAGAGACCCTTAGAGTCAGAGTCAAAATTGAAGTCCATGAACCGCTAAAAAGGGCAGTCAAGATCAAAGTGGGAACCATGGTAGAGGAGGAATGGATACAAGTCAAATACGAAAAGTTACCAGACTATTGTTATGGGTGCGGGAGGATTGGCCATCATATGAGAGACTGTGAAGAGGTGGAAAAAGAAAGCGATGAAACTATTCAGTTCGGGCCATGGCTAAAATATGATTCACCCATTGAAACAAGGGGTAAAGATAACCAAGAGATAGGAAAAGGAACACCCAGACGGGGTAGGGGACGCGGAGTTAACAGAGGGACGTTTTTTAACAATGGACATGGCAAACATTCTGGAAGCTTCCAGCTGTCAGAAGAACTTGGCTACCATTGA

mRNA sequence

ATGCTCCTGTGTATGGCAAACTGCAGGCCAAACATCTCGAAGAACGCATCCCAAACCGAACTAGCAAAATCACATCTCGAAGAACGTGTATTTGAGCTCTCTTTTGCATTTTGTGATATTCCATGCTGTGTTGGAGGTGATTTTAACATAACTCATTCAATTCATGAAAGGATACCTTGTGGGAAACAAACAAAGGAGATGCGGCAATTTAACAGATTAATTAAAGAAACGGGTCTTATGGAAATTCCACTTTCCAATGGAAAATTTACATGGTCAAAGCTAGGGGATGATAGTTTCCAATCTTTCTCTTATTGCACCATCTGGACAACACTTAAAGATGACATCTTGCTGTTTTGCAAATATAATGATGCTATGTTTAATGTTTTATCTCAAACTATTGCCTTATTTGAATGGAGCTCGGGTTTGATGGTGAATTGGGGAAAATCTACAATTTGTGGCATAAATATTCAAAATAATGAGGTGGCTCTTATGGCTGAAAAGTTGACTTGCAAGGTGGAAAATCTTCCTTTTAATTACCTTGGACTATCCCTTGGAGGTCATCCTAAATCGCCAACTTTTTGGCAACCAGTTGTAGATAAAATCCTTAGGAAATTGGATAGGTGGAGGAAGGATGACTCTTTCCCTTATGCGATCAAAGCCCTTTTGTTCAAGTTATGGTTGGAGAGGAATTCAAGAACTTTTATAATAAAAGTCTTTCATGGGTCTCTGGTAGGCTTTTTAACACTGCATTCAACCATTGGTAAATGTGGAGGAGAGACCCTTAGAGTCAGAGTCAAAATTGAAGTCCATGAACCGCTAAAAAGGGCAGTCAAGATCAAAGTGGGAACCATGGTAGAGGAGGAATGGATACAAGTCAAATACGAAAAGTTACCAGACTATTGTTATGGGTGCGGGAGGATTGGCCATCATATGAGAGACTGTGAAGAGGTGGAAAAAGAAAGCGATGAAACTATTCAGTTCGGGCCATGGCTAAAATATGATTCACCCATTGAAACAAGGGGTAAAGATAACCAAGAGATAGGAAAAGGAACACCCAGACGGGGTAGGGGACGCGGAGTTAACAGAGGGACGTTTTTTAACAATGGACATGGCAAACATTCTGGAAGCTTCCAGCTGTCAGAAGAACTTGGCTACCATTGA

Coding sequence (CDS)

ATGCTCCTGTGTATGGCAAACTGCAGGCCAAACATCTCGAAGAACGCATCCCAAACCGAACTAGCAAAATCACATCTCGAAGAACGTGTATTTGAGCTCTCTTTTGCATTTTGTGATATTCCATGCTGTGTTGGAGGTGATTTTAACATAACTCATTCAATTCATGAAAGGATACCTTGTGGGAAACAAACAAAGGAGATGCGGCAATTTAACAGATTAATTAAAGAAACGGGTCTTATGGAAATTCCACTTTCCAATGGAAAATTTACATGGTCAAAGCTAGGGGATGATAGTTTCCAATCTTTCTCTTATTGCACCATCTGGACAACACTTAAAGATGACATCTTGCTGTTTTGCAAATATAATGATGCTATGTTTAATGTTTTATCTCAAACTATTGCCTTATTTGAATGGAGCTCGGGTTTGATGGTGAATTGGGGAAAATCTACAATTTGTGGCATAAATATTCAAAATAATGAGGTGGCTCTTATGGCTGAAAAGTTGACTTGCAAGGTGGAAAATCTTCCTTTTAATTACCTTGGACTATCCCTTGGAGGTCATCCTAAATCGCCAACTTTTTGGCAACCAGTTGTAGATAAAATCCTTAGGAAATTGGATAGGTGGAGGAAGGATGACTCTTTCCCTTATGCGATCAAAGCCCTTTTGTTCAAGTTATGGTTGGAGAGGAATTCAAGAACTTTTATAATAAAAGTCTTTCATGGGTCTCTGGTAGGCTTTTTAACACTGCATTCAACCATTGGTAAATGTGGAGGAGAGACCCTTAGAGTCAGAGTCAAAATTGAAGTCCATGAACCGCTAAAAAGGGCAGTCAAGATCAAAGTGGGAACCATGGTAGAGGAGGAATGGATACAAGTCAAATACGAAAAGTTACCAGACTATTGTTATGGGTGCGGGAGGATTGGCCATCATATGAGAGACTGTGAAGAGGTGGAAAAAGAAAGCGATGAAACTATTCAGTTCGGGCCATGGCTAAAATATGATTCACCCATTGAAACAAGGGGTAAAGATAACCAAGAGATAGGAAAAGGAACACCCAGACGGGGTAGGGGACGCGGAGTTAACAGAGGGACGTTTTTTAACAATGGACATGGCAAACATTCTGGAAGCTTCCAGCTGTCAGAAGAACTTGGCTACCATTGA

Protein sequence

MLLCMANCRPNISKNASQTELAKSHLEERVFELSFAFCDIPCCVGGDFNITHSIHERIPCGKQTKEMRQFNRLIKETGLMEIPLSNGKFTWSKLGDDSFQSFSYCTIWTTLKDDILLFCKYNDAMFNVLSQTIALFEWSSGLMVNWGKSTICGINIQNNEVALMAEKLTCKVENLPFNYLGLSLGGHPKSPTFWQPVVDKILRKLDRWRKDDSFPYAIKALLFKLWLERNSRTFIIKVFHGSLVGFLTLHSTIGKCGGETLRVRVKIEVHEPLKRAVKIKVGTMVEEEWIQVKYEKLPDYCYGCGRIGHHMRDCEEVEKESDETIQFGPWLKYDSPIETRGKDNQEIGKGTPRRGRGRGVNRGTFFNNGHGKHSGSFQLSEELGYH

Homology

[Close]

BLAST of Spg014952 vs. NCBI nr
Match: XP_038880332.1 (uncharacterized protein LOC120071973 [Benincasa hispida])

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-24
Identity = 56/97 (57.73%), Postives = 72/97 (74.23%), Query Frame = 0


Query: 114 DILLFCKYNDAMFNVLSQTIALFEWSSGLMVNWGKSTICGINIQNNEVALMAEKLTCKVE 173
           D LLFCKY D M   L +TI +FEW S   VNW KS ICGINI+ N++  +A +L CKV+
Sbjct: 99  DTLLFCKYGDEMIENL-RTIEIFEWCSSQKVNWEKSAICGINIEENKMLSVAAQLNCKVK 158

Query: 174 NLPFNYLGLSLGGHPKSPTFWQPVVDKILRKLDRWRK 211
           +LP  YLGL LGG+PK+ +FWQPV+DK+  KLD+WR+
Sbjct: 159 HLPLMYLGLPLGGYPKNVSFWQPVIDKLQGKLDKWRR 194

[Close]

BLAST of Spg014952 vs. NCBI nr
Match: TYK06397.1 (hypothetical protein E5676_scaffold163G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 117.1 bits (292), Expect = 3.4e-22
Identity = 52/95 (54.74%), Postives = 70/95 (73.68%), Query Frame = 0


Query: 113 DDILLFCKYNDAMFNVLSQTIALFEWSSGLMVNWGKSTICGINIQNNEVALMAEKLTCKV 172
           DD +LFCK +++M   L +TI  FEW SG  VNW KS +  IN+ ++E++LMA KL CK+
Sbjct: 155 DDTILFCKDDESMLIKLKETINRFEWCSGQKVNWKKSALSRINLGDDELSLMAGKLGCKM 214

Query: 173 ENLPFNYLGLSLGGHPKSPTFWQPVVDKILRKLDR 208
           + LPF YLGL LGG+P+   FWQPVVD++ +KLDR
Sbjct: 215 QKLPFLYLGLPLGGYPRQKLFWQPVVDRVYKKLDR 249

[Close]

BLAST of Spg014952 vs. NCBI nr
Match: KAA0044242.1 (Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 114.8 bits (286), Expect = 1.7e-21
Identity = 51/95 (53.68%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 115 ILLFCKYNDAMFNVLSQTIALFEWSSGLMVNWGKSTICGINIQNNEVALMAEKLTCKVEN 174
           ILLF   ++AM   L + I LFEW SG  VNW KST+ G+N+ ++E+  MA KL CKVE 
Sbjct: 11  ILLFVVDDEAMLLKLKEAINLFEWCSGHKVNWDKSTLSGVNMGDDELLHMAGKLCCKVEK 70

Query: 175 LPFNYLGLSLGGHPKSPTFWQPVVDKILRKLDRWR 210
           LPF YLGL LGG+P+   FW+P++D++ +KLDRW+
Sbjct: 71  LPFLYLGLLLGGYPRQKVFWEPMIDRVHKKLDRWK 105

[Close]

BLAST of Spg014952 vs. NCBI nr
Match: XP_038889274.1 (uncharacterized protein LOC120079176 [Benincasa hispida])

HSP 1 Score: 113.6 bits (283), Expect = 3.8e-21
Identity = 49/97 (50.52%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 113 DDILLFCKYNDAMFNVLSQTIALFEWSSGLMVNWGKSTICGINIQNNEVALMAEKLTCKV 172
           D  LLFCKY+  M   L QT+  F+W SG  VNW KS + GIN+  NE+   A  L CK 
Sbjct: 412 DSTLLFCKYDSIMLAKLKQTVEFFKWCSGQKVNWEKSALYGINVDENELISTAASLNCKA 471

Query: 173 ENLPFNYLGLSLGGHPKSPTFWQPVVDKILRKLDRWR 210
           ++LPF+YLGL LGG+ K  +FWQPV++    KLD+W+
Sbjct: 472 DHLPFSYLGLPLGGYLKKLSFWQPVLNNFQAKLDKWK 508

[Close]

BLAST of Spg014952 vs. NCBI nr
Match: TYK01565.1 (hypothetical protein E5676_scaffold451G001420 [Cucumis melo var. makuwa])

HSP 1 Score: 105.9 bits (263), Expect = 7.8e-19
Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 0


Query: 113 DDILLFCKYNDAMFNVLSQTIALFEWSSGLMVNWGKSTICGINIQNNEVALMAEKLTCKV 172
           D  LLFC Y+  M + L QT+  FEW SG  VNW KS +CGIN+  +E+  MA  L  KV
Sbjct: 178 DYTLLFCNYDSNMMDNLRQTLDFFEWCSGQKVNWDKSALCGINVAESELLSMATTLKDKV 237

Query: 173 ENLPFNYLGLSLGGHPKSPTFWQPVVDKILRKLDRWRK 211
           ++LP  YLGL LGG+ K  + WQ V DK+  KLD+W++
Sbjct: 238 DHLPVIYLGLPLGGYLKQISLWQLVSDKVHAKLDKWKR 275

[Close]

BLAST of Spg014952 vs. ExPASy TrEMBL
Match: A0A5D3C3J5 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00940 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.6e-22
Identity = 52/95 (54.74%), Postives = 70/95 (73.68%), Query Frame = 0


Query: 113 DDILLFCKYNDAMFNVLSQTIALFEWSSGLMVNWGKSTICGINIQNNEVALMAEKLTCKV 172
           DD +LFCK +++M   L +TI  FEW SG  VNW KS +  IN+ ++E++LMA KL CK+
Sbjct: 155 DDTILFCKDDESMLIKLKETINRFEWCSGQKVNWKKSALSRINLGDDELSLMAGKLGCKM 214

Query: 173 ENLPFNYLGLSLGGHPKSPTFWQPVVDKILRKLDR 208
           + LPF YLGL LGG+P+   FWQPVVD++ +KLDR
Sbjct: 215 QKLPFLYLGLPLGGYPRQKLFWQPVVDRVYKKLDR 249

[Close]

BLAST of Spg014952 vs. ExPASy TrEMBL
Match: A0A5A7TLN3 (Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G006040 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 8.2e-22
Identity = 51/95 (53.68%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 115 ILLFCKYNDAMFNVLSQTIALFEWSSGLMVNWGKSTICGINIQNNEVALMAEKLTCKVEN 174
           ILLF   ++AM   L + I LFEW SG  VNW KST+ G+N+ ++E+  MA KL CKVE 
Sbjct: 11  ILLFVVDDEAMLLKLKEAINLFEWCSGHKVNWDKSTLSGVNMGDDELLHMAGKLCCKVEK 70

Query: 175 LPFNYLGLSLGGHPKSPTFWQPVVDKILRKLDRWR 210
           LPF YLGL LGG+P+   FW+P++D++ +KLDRW+
Sbjct: 71  LPFLYLGLLLGGYPRQKVFWEPMIDRVHKKLDRWK 105

[Close]

BLAST of Spg014952 vs. ExPASy TrEMBL
Match: A0A5D3BQV1 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001420 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.8e-19
Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 0


Query: 113 DDILLFCKYNDAMFNVLSQTIALFEWSSGLMVNWGKSTICGINIQNNEVALMAEKLTCKV 172
           D  LLFC Y+  M + L QT+  FEW SG  VNW KS +CGIN+  +E+  MA  L  KV
Sbjct: 178 DYTLLFCNYDSNMMDNLRQTLDFFEWCSGQKVNWDKSALCGINVAESELLSMATTLKDKV 237

Query: 173 ENLPFNYLGLSLGGHPKSPTFWQPVVDKILRKLDRWRK 211
           ++LP  YLGL LGG+ K  + WQ V DK+  KLD+W++
Sbjct: 238 DHLPVIYLGLPLGGYLKQISLWQLVSDKVHAKLDKWKR 275

[Close]

BLAST of Spg014952 vs. ExPASy TrEMBL
Match: A0A5D3DC03 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00680 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-17
Identity = 48/108 (44.44%), Postives = 63/108 (58.33%), Query Frame = 0


Query: 113 DDILLFCKYNDAMFNVLSQTIALFEWSSGLMVNWGKSTICGINIQNNEVALMAEKLTCKV 172
           DD LLF KY+++M   L  TIALFEW SG  +NW KS +CG+N++ +E+ LMAEK+ C  
Sbjct: 235 DDTLLFYKYDESMLMKLKDTIALFEWCSGPRINWEKSALCGVNLEEDELKLMAEKMGCSA 294

Query: 173 ENLPFNYLGLSLGG----------HPKSPTFWQPVVDKILRKLDRWRK 211
           EN+PF YLGL LGG                FW+      +  L +W K
Sbjct: 295 ENMPFVYLGLPLGGIQAVNVASSLERMRNCFWEEHTGSKINHLVKWAK 342

[Close]

BLAST of Spg014952 vs. ExPASy TrEMBL
Match: A0A5D3C786 (Putative ribonuclease H protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001010 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.8e-16
Identity = 39/85 (45.88%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 116 LLFCKYNDAMFNVLSQTIALFEWSSGLMVNWGKSTICGINIQNNEVALMAEKLTCKVENL 175
           ++FCK+++ M   L +T+ +FE  SG  + W KS+ICGIN++++++      L CKVE++
Sbjct: 11  IMFCKFDEVMLENLRKTLFVFELCSGQKIGWEKSSICGINVEDSQILSTTNNLNCKVESI 70

Query: 176 PFNYLGLSLGGHPKSPTFWQPVVDK 201
           P  YLGL LGG+PKS  F QP++DK
Sbjct: 71  PLIYLGLPLGGYPKSSLFCQPIIDK 95

The following BLAST results are available for this feature:

BLAST of Spg014952 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880332.1	1.2e-24	57.73	uncharacterized protein LOC120071973 [Benincasa hispida]	[more]
TYK06397.1	3.4e-22	54.74	hypothetical protein E5676_scaffold163G00940 [Cucumis melo var. makuwa]	[more]
KAA0044242.1	1.7e-21	53.68	Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]	[more]
XP_038889274.1	3.8e-21	50.52	uncharacterized protein LOC120079176 [Benincasa hispida]	[more]
TYK01565.1	7.8e-19	50.00	hypothetical protein E5676_scaffold451G001420 [Cucumis melo var. makuwa]	[more]

BLAST of Spg014952 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg014952 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C3J5	1.6e-22	54.74	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7TLN3	8.2e-22	53.68	Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5D3BQV1	3.8e-19	50.00	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3DC03	1.6e-17	44.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C786	1.8e-16	45.88	Putative ribonuclease H protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of Spg014952 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 4..117 e-value: 2.7E-6 score: 29.3
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 38..99
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 268..315 e-value: 5.5E-13 score: 48.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..386
None	No IPR available	PANTHER	PTHR33116:SF47	REVERSE TRANSCRIPTASE DOMAIN, ZINC FINGER, CCHC-TYPE-RELATED	coord: 103..219
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 103..219
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 301..316 score: 10.048306
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 298..319

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg014952.1	Spg014952.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding