Spg014935 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg014935
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H
Location	scaffold3: 31994587 .. 31997985 (-)
RNA-Seq Expression	Spg014935
Synteny	Spg014935

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGCAAAGTACTGAGATGGAGAAAACAAGGAAAGATATTGAGGAGTTACGAGAAAAAATGGATGCCATTCTTGTCGCCTTGGAAAGAGGTAAAATAATACCTGATATTGCTCAGTCCAGCAATACAATGAATGACCCTCCAATCCGGCAATCAATAGAGGGCACTACTCCAAAATATCATCCATTGTACAATATTCCAGTAGAGCAGCACCCATTTCCATTTTTCAAGAATGACCAAGTGCCTGTACACAATCAACCTGGATTTTCACTACCCACAGAGGTACCTCCCAAGGTGACCATTACAGTTCCCAATTTAGATGATCCTGAAATCAGAAAAGAGCTAACGGGAGGTGAGAAAGTCACTTCTAGTGAAAAGCTTGAAGTCCTGGAGGAAAGGTTAAGGGTAGTAGAAGGAACAGACGTCTTCGGAAAATATAGATGCGACCAAGCTATGCTTGGTACCAGATGTAATCCTCCCTCCAAAATTCAAGGTGCCCGAGTTTGAAAAGTATGATGGAGCATCCTGTCCTAAAAACCATCTCATCATGTATTGCAGGAAGATGACAGCATACGTCCAAAATGACAAGTTGTTAATTCACTGCTTCCAGGACGGTCCAGCATCTCGATGGTATATGCAGTTAGACAACACTCATATATGTTCATGGAAGAATCTAGCCGATTCATTTTTAAAGCAATATAAGCACAACATAGATATGACTCCTGACCGCCTAGACCTCCAGAGGATGGAAAAGAAGAGCACAGAAAGCTTTAAAGAGTATGCCCAAAGGTGGAGGGATACTGCTGCTCAGGTGCAACCACCTTTAGCCGATAAGGAGCTGTCGACCATGTTTATTAATACTCTCAAATCTCCTTTCTATGATAAGATGATTGGGAGTGCCTCTACCAATTTCTCTGACATAATGACAATTGGAGAGAGAATCGAGTACGGAATTAAGCATGGAAAGATAACTGATACGACTGGATCATCAACAGCGAAAAAGGCGGTTCCATCGAAGAAAAAAGAGGGAGAAGTTCAGATGATTGGTTTCAATTCAAGACAACCATACCCTAATGCCAGAGTGCCACAATATCACTATCCACCTCCATATGTTTACCCTCAACCCTATATCAATAATACGTCAGCCCAATACTCATCCCCTTACGTCCAAAATCCTCGTCCTATTCAAGGCTACCAGCCTCGGAATCAACAGAACACTCCTTATGTCCAGGGACACCAAAACAATAAAGGCGTCCATAGACAAACTCATTTTGATCCGATTCTGATGACATATACTGAACTTCTACCCCAACTCTTCCAGAATAATCAGCTGGCACTCGTGCCAATGGACCCAGTAAAGCCACCTTACCCAAAGTGGTATGATCCAAATGCCCGTTGCGACTACCATGCAGGAGCAATTGGACATTCCACTGAAAACTGTACTGCACTCAAGCATAGGGTGCAAGCATTGATCAAGGCAGGATGGTTGAACTTTAAGAAAGAAAATGGTCCAGATGTCAACAACAATCCTCTGCCAAACCATCAGAATGCACAAGTAAATGCGATAGAGGTTCATGGAGTTGATTTGAAAAAGAATGCTGAGAGCGTAGTGACTCCCATGGGAGAACTATTCAAAATATTATCCAGTAATGGATACATTGGAGTAGAACGCCTCCAATTAGATTTGGGTGTCAAAGCATACGATGACAGTTTGATGTGTTCCTATCACATTGGGGCAAAAGGGCATTCTATCGACCAATGTCCTCATTTTCGTTTGAAGGTCCAGGAGTTGTTAGATTCACATTTTTTAACAGTTTCTCAAAAGATGGCTCAGCTCCCTCAGTATGGGGAAGTTGATATTATAGAAGAATGTTCAAGGTTTTCTCTCAAGCCAAAACTGTTAACAATTTCTTATCGCGAGAAGCATAGTACCCCAAATTCCAAGCCAAGACCGATTACCATCCAGATTCCGACTCCCTTTGAATATAAAAGTTCAAAAGCAGTACCTTGGAACTATGAATATAAGGTAACTGTTGGTTCTGAACCCCTTCCAATCCATAATATCAGTGGGATAGGAGGTCTAACACGAAGCGGGAAGTGTTATACACCAGAAGACCTATTGAAACCCAAGGGTAAAGAAAAAGGAAAAGCCAAGATCACTGAAGATATCAAGGGAAAAACAGAAGAGCCCATTGCAGTGAAGAACCTGGATGTTAAACAGCCAGCATCTGAAGAGGACATCCAAGAATTTTTAAAGTTGGTTAAGCAAAGTGATTATAAAGTGGTTGAACAGTTAGGTCGAACCCCTGCAAAGATTTCCATACTGGCTTTGTTATTGTCTTCAGATACGCATCGTAAGACCTTGTTAGACATATTGAATCAAACTTATGTTCCGCAGGATATTACGGTGGACAACTTGGATAATATCGTTGGAAACATAACTGCATCCAGTTCAGTAACTTTCACAGATGATGAGTTACCACCAGAAGACACCGGACACACTAAAGCCTTGCACATTACAGTTAAGTGCAAAAATTTTGCTGTGGCAAAAGTTCTAGTTGATAATGGTTCCTCCTTGAACATAATGCCTAAATCCACGTTGGAGAAATTGCCTGTTGACATGTCTCATGTAAGACCCAGCACTATGATCGTACGGGCTTTTGATGGGGCACGTAGTGAAGTTGTTGGAGACATAGAAGTGCCCATCCAGATAGGTCCATGCACCTTCGATATATCCTTTCAGGTTATGAACATTAATTCGGCCTACAGCTTCTTGTTAGGGTGTCCCTGGATTCACTCAGCTGGAGTGGTCCCATCATCATTACACCAAAAACTTAATTTGTGGTCAACCGTAAACTAGTGATCATATCTGGACAGGAGGATATCTTAGTGTCAAGACCCTCCTCAATGCCCTACATAGAAGTAGCAGAAGAGGTTTTTGAGTCATCATTTCAAGCTTTTGAGATTGCAAATGCCACAACTTTATACGGAGAGATAGGGAAAATGGAGCTGCAACTTTCAAAACTCTCCTTAACAGGAAGCAACCAAAGCCTAAAAAATTTGTTGAATATGTCGAAAAATATGAAGAGGTTTGGTTTGGGATATAAACCAAGCAAAAAAGATATGATTAAAGCACACAAGCAGGAGAGAGAAAAACGACTGGCTAGATTGGGGAGCCGTGAGTCAAAGTATCAAATGAATATCATTCCTCATCTTCATGATACCTTCATCTTTGCTGGAATAATTCATCCAGAATCTCAAGACCCTACAGTCATGGCTATAATCGAACAGAAGAAAGAAGCCGGTCCCTTGGTTTATCTGTGCCCAGAAGACTTTGAACTCAATAATTGGACTGTAATGGAGCTACCATCATTTGTTAATGAGATATCAAAGTAA

mRNA sequence

ATGGAAGAGCAAAGTACTGAGATGGAGAAAACAAGGAAAGATATTGAGGAGTTACGAGAAAAAATGGATGCCATTCTTGTCGCCTTGGAAAGAGGTAAAATAATACCTGATATTGCTCAGTCCAGCAATACAATGAATGACCCTCCAATCCGGCAATCAATAGAGGGCACTACTCCAAAATATCATCCATTGTACAATATTCCAGTAGAGCAGCACCCATTTCCATTTTTCAAGAATGACCAAGTGCCTGTACACAATCAACCTGGATTTTCACTACCCACAGAGAGCGTAGTGACTCCCATGGGAGAACTATTCAAAATATTATCCAGTAATGGATACATTGGAGTAGAACGCCTCCAATTAGATTTGGGTGTCAAAGCATACGATGACAGTTTGATGTGTTCCTATCACATTGGGGCAAAAGGGCATTCTATCGACCAATGTCCTCATTTTCGTTTGAAGGTCCAGGAGTTGTTAGATTCACATTTTTTAACAGTTTCTCAAAAGATGGCTCAGCTCCCTCAGTATGGGGAAGTTGATATTATAGAAGAATGTTCAAGCAAAAAAGATATGATTAAAGCACACAAGCAGGAGAGAGAAAAACGACTGGCTAGATTGGGGAGCCGTGAGTCAAAGTATCAAATGAATATCATTCCTCATCTTCATGATACCTTCATCTTTGCTGGAATAATTCATCCAGAATCTCAAGACCCTACAGTCATGGCTATAATCGAACAGAAGAAAGAAGCCGGTCCCTTGGTTTATCTGTGCCCAGAAGACTTTGAACTCAATAATTGGACTGTAATGGAGCTACCATCATTTGTTAATGAGATATCAAAGTAA

Coding sequence (CDS)

ATGGAAGAGCAAAGTACTGAGATGGAGAAAACAAGGAAAGATATTGAGGAGTTACGAGAAAAAATGGATGCCATTCTTGTCGCCTTGGAAAGAGGTAAAATAATACCTGATATTGCTCAGTCCAGCAATACAATGAATGACCCTCCAATCCGGCAATCAATAGAGGGCACTACTCCAAAATATCATCCATTGTACAATATTCCAGTAGAGCAGCACCCATTTCCATTTTTCAAGAATGACCAAGTGCCTGTACACAATCAACCTGGATTTTCACTACCCACAGAGAGCGTAGTGACTCCCATGGGAGAACTATTCAAAATATTATCCAGTAATGGATACATTGGAGTAGAACGCCTCCAATTAGATTTGGGTGTCAAAGCATACGATGACAGTTTGATGTGTTCCTATCACATTGGGGCAAAAGGGCATTCTATCGACCAATGTCCTCATTTTCGTTTGAAGGTCCAGGAGTTGTTAGATTCACATTTTTTAACAGTTTCTCAAAAGATGGCTCAGCTCCCTCAGTATGGGGAAGTTGATATTATAGAAGAATGTTCAAGCAAAAAAGATATGATTAAAGCACACAAGCAGGAGAGAGAAAAACGACTGGCTAGATTGGGGAGCCGTGAGTCAAAGTATCAAATGAATATCATTCCTCATCTTCATGATACCTTCATCTTTGCTGGAATAATTCATCCAGAATCTCAAGACCCTACAGTCATGGCTATAATCGAACAGAAGAAAGAAGCCGGTCCCTTGGTTTATCTGTGCCCAGAAGACTTTGAACTCAATAATTGGACTGTAATGGAGCTACCATCATTTGTTAATGAGATATCAAAGTAA

Protein sequence

MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIAQSSNTMNDPPIRQSIEGTTPKYHPLYNIPVEQHPFPFFKNDQVPVHNQPGFSLPTESVVTPMGELFKILSSNGYIGVERLQLDLGVKAYDDSLMCSYHIGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMAQLPQYGEVDIIEECSSKKDMIKAHKQEREKRLARLGSRESKYQMNIIPHLHDTFIFAGIIHPESQDPTVMAIIEQKKEAGPLVYLCPEDFELNNWTVMELPSFVNEISK

Homology

[Close]

BLAST of Spg014935 vs. NCBI nr
Match: XP_022158986.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia])

HSP 1 Score: 92.0 bits (227), Expect = 8.5e-15
Identity = 52/120 (43.33%), Postives = 72/120 (60.00%), Query Frame = 0


Query: 69  VEQHPFPFFKNDQVPVHNQPGFSLPTE--SVVTPMGELFKILSSNGYIGVERLQLDLGVK 128
           V ++P P  +N Q+           ++   + TPM ELF+IL  +GY+ VE L  +L  K
Sbjct: 430 VSKNPLPNHQNVQINAIECQEIESKSKVADIRTPMVELFEILLGSGYVSVEYLCPNLKYK 489

Query: 129 AYDDSLMCSYHIGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMAQLPQYGEVDIIEECS 187
            YD+SL C +H GAKGHS++QC  FR+KVQELLDS  LTV    A   Q   ++I+E+ S
Sbjct: 490 GYDESLTCPFHAGAKGHSLEQCNSFRMKVQELLDSKILTV----ANSHQKKGINIVEDVS 545

[Close]

BLAST of Spg014935 vs. NCBI nr
Match: XP_022155744.1 (uncharacterized protein LOC111022791 [Momordica charantia])

HSP 1 Score: 89.7 bits (221), Expect = 4.2e-14
Identity = 43/95 (45.26%), Postives = 63/95 (66.32%), Query Frame = 0


Query: 187 SKKDMIKAHKQEREKRLARLGSRESKYQMNIIPHLHDTFIFAGIIHPESQDPTVM-AIIE 246
           S+ D+I+    E+ KRL+R  + E  Y   I+P L  +F  AG IH E  + +V+ A+ E
Sbjct: 442 SRGDIIRVRSLEKAKRLSRFENEERDYPRRIVPPLTHSFRSAGTIHQEYDESSVVAAVTE 501

Query: 247 QKKEAGPLVYLCPEDFELNNWTVMELPSFVNEISK 281
           ++++ GP VYLCP+ FEL+NW+V+ELPSFVN   K
Sbjct: 502 EREQVGPFVYLCPDGFELSNWSVIELPSFVNNKXK 536

[Close]

BLAST of Spg014935 vs. NCBI nr
Match: XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])

HSP 1 Score: 89.4 bits (220), Expect = 5.5e-14
Identity = 53/133 (39.85%), Postives = 76/133 (57.14%), Query Frame = 0


Query: 69  VEQHPFPFFKNDQVPVHNQPGFSLPTE--SVVTPMGELFKILSSNGYIGVERLQLDLGVK 128
           V ++P    +N Q+      G    ++   + TP  ELF+IL  +GY+ VE L  +L  K
Sbjct: 423 VSKNPLSNHQNVQINAIECQGIESKSKVADIRTPKEELFEILLGSGYVSVEYLCPNLKYK 482

Query: 129 AYDDSLMCSYHIGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMAQLPQYGEVDIIEECS 188
            YD+SL C +H GAKGHS++QC  FR+KVQELLDS  LTV    A   Q   ++++E+ S
Sbjct: 483 EYDESLTCPFHAGAKGHSLEQCNSFRMKVQELLDSKILTV----ANSHQKKGINVVEDVS 542

Query: 189 SKKDMIKAHKQER 200
             +    A K +R
Sbjct: 543 VAEGSSDALKPKR 551

[Close]

BLAST of Spg014935 vs. NCBI nr
Match: XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])

HSP 1 Score: 73.9 bits (180), Expect = 2.4e-09
Identity = 45/101 (44.55%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 1   MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIAQSSNTMND------------P 60
           ME+Q  E EKTRKDIEELREK+D I + LE+GK   D A SSN +++            P
Sbjct: 1   MEDQKAEQEKTRKDIEELREKLDXIXLXLEKGKATADPATSSNPIHEPQETPPYPPGYGP 60

Query: 61  PIRQSIEGTTPK---YHPLYNIPVEQHPFPFFKN-DQVPVH 86
           P+R   EG  P+   Y+PLY++P+ Q+P  F K   Q+P +
Sbjct: 61  PLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTN 101

HSP 2 Score: 89.0 bits (219), Expect = 7.2e-14
Identity = 49/130 (37.69%), Postives = 74/130 (56.92%), Query Frame = 0


Query: 69  VEQHPFPFFKNDQVPVHNQPGFSLPTE--SVVTPMGELFKILSSNGYIGVERLQLDLGVK 128
           V+ +P P  KN Q+      G    ++   + TPM  LF+IL  +GY+ +E L  D+  +
Sbjct: 532 VKNNPLPNHKNVQINAVECQGIESRSKVSEITTPMQXLFEILWXHGYMSMEHLCPDIRCE 591

Query: 129 AYDDSLMCSYHIGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMAQLPQYGEVDIIEECS 188
            YD++L C YH GA+GH ++QC  F+ KVQELLD   LTV+Q      Q   +D++E  S
Sbjct: 592 RYDENLTCPYHAGARGHPLEQCSCFKEKVQELLDLKILTVTQS----HQEQRIDVVEYVS 651

Query: 189 SKKDMIKAHK 197
           + +    A+K
Sbjct: 652 TAESSSAAYK 657

[Close]

BLAST of Spg014935 vs. NCBI nr
Match: XP_022155098.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia])

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-05
Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 2  EEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIAQSSNTMNDPPIRQSIEGTTPKY 61
          +++ +E EKTRKDIEELREK+DAIL+ALE+GK    IA++SN +++PP  Q   G  P +
Sbjct: 3  DDRKSEQEKTRKDIEELREKLDAILLALEKGK---TIAETSNPIHEPPTPQFPPGFEPSF 61

Query: 62 HP 64
           P
Sbjct: 63 RP 61

HSP 2 Score: 88.6 bits (218), Expect = 9.4e-14
Identity = 44/90 (48.89%), Postives = 60/90 (66.67%), Query Frame = 0


Query: 97  VVTPMGELFKILSSNGYIGVERLQLDLGVKAYDDSLMCSYHIGAKGHSIDQCPHFRLKVQ 156
           + TPM ELF+IL  +GY+ VE L  +L  K YD+SL C +H GAKGH+++QC  FR+ VQ
Sbjct: 395 ITTPMEELFEILLGSGYVSVEYLCPNLKYKGYDESLTCPFHAGAKGHALEQCNSFRMIVQ 454

Query: 157 ELLDSHFLTVSQKMAQLPQYGEVDIIEECS 187
           ELLDS  LTV    A   Q   ++++E+ S
Sbjct: 455 ELLDSKILTV----ANSHQKKGINVVEDVS 480

[Close]

BLAST of Spg014935 vs. ExPASy TrEMBL
Match: A0A6J1E2J7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.1e-15
Identity = 52/120 (43.33%), Postives = 72/120 (60.00%), Query Frame = 0


Query: 69  VEQHPFPFFKNDQVPVHNQPGFSLPTE--SVVTPMGELFKILSSNGYIGVERLQLDLGVK 128
           V ++P P  +N Q+           ++   + TPM ELF+IL  +GY+ VE L  +L  K
Sbjct: 430 VSKNPLPNHQNVQINAIECQEIESKSKVADIRTPMVELFEILLGSGYVSVEYLCPNLKYK 489

Query: 129 AYDDSLMCSYHIGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMAQLPQYGEVDIIEECS 187
            YD+SL C +H GAKGHS++QC  FR+KVQELLDS  LTV    A   Q   ++I+E+ S
Sbjct: 490 GYDESLTCPFHAGAKGHSLEQCNSFRMKVQELLDSKILTV----ANSHQKKGINIVEDVS 545

[Close]

BLAST of Spg014935 vs. ExPASy TrEMBL
Match: A0A6J1DR66 (uncharacterized protein LOC111022791 OS=Momordica charantia OX=3673 GN=LOC111022791 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-14
Identity = 43/95 (45.26%), Postives = 63/95 (66.32%), Query Frame = 0


Query: 187 SKKDMIKAHKQEREKRLARLGSRESKYQMNIIPHLHDTFIFAGIIHPESQDPTVM-AIIE 246
           S+ D+I+    E+ KRL+R  + E  Y   I+P L  +F  AG IH E  + +V+ A+ E
Sbjct: 442 SRGDIIRVRSLEKAKRLSRFENEERDYPRRIVPPLTHSFRSAGTIHQEYDESSVVAAVTE 501

Query: 247 QKKEAGPLVYLCPEDFELNNWTVMELPSFVNEISK 281
           ++++ GP VYLCP+ FEL+NW+V+ELPSFVN   K
Sbjct: 502 EREQVGPFVYLCPDGFELSNWSVIELPSFVNNKXK 536

[Close]

BLAST of Spg014935 vs. ExPASy TrEMBL
Match: A0A6J1DZ90 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.7e-14
Identity = 53/133 (39.85%), Postives = 76/133 (57.14%), Query Frame = 0


Query: 69  VEQHPFPFFKNDQVPVHNQPGFSLPTE--SVVTPMGELFKILSSNGYIGVERLQLDLGVK 128
           V ++P    +N Q+      G    ++   + TP  ELF+IL  +GY+ VE L  +L  K
Sbjct: 423 VSKNPLSNHQNVQINAIECQGIESKSKVADIRTPKEELFEILLGSGYVSVEYLCPNLKYK 482

Query: 129 AYDDSLMCSYHIGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMAQLPQYGEVDIIEECS 188
            YD+SL C +H GAKGHS++QC  FR+KVQELLDS  LTV    A   Q   ++++E+ S
Sbjct: 483 EYDESLTCPFHAGAKGHSLEQCNSFRMKVQELLDSKILTV----ANSHQKKGINVVEDVS 542

Query: 189 SKKDMIKAHKQER 200
             +    A K +R
Sbjct: 543 VAEGSSDALKPKR 551

[Close]

BLAST of Spg014935 vs. ExPASy TrEMBL
Match: A0A6J1DZ90 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-09
Identity = 45/101 (44.55%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 1   MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIAQSSNTMND------------P 60
           ME+Q  E EKTRKDIEELREK+D I + LE+GK   D A SSN +++            P
Sbjct: 1   MEDQKAEQEKTRKDIEELREKLDXIXLXLEKGKATADPATSSNPIHEPQETPPYPPGYGP 60

Query: 61  PIRQSIEGTTPK---YHPLYNIPVEQHPFPFFKN-DQVPVH 86
           P+R   EG  P+   Y+PLY++P+ Q+P  F K   Q+P +
Sbjct: 61  PLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTN 101

HSP 2 Score: 89.0 bits (219), Expect = 3.5e-14
Identity = 49/130 (37.69%), Postives = 74/130 (56.92%), Query Frame = 0


Query: 69  VEQHPFPFFKNDQVPVHNQPGFSLPTE--SVVTPMGELFKILSSNGYIGVERLQLDLGVK 128
           V+ +P P  KN Q+      G    ++   + TPM  LF+IL  +GY+ +E L  D+  +
Sbjct: 532 VKNNPLPNHKNVQINAVECQGIESRSKVSEITTPMQXLFEILWXHGYMSMEHLCPDIRCE 591

Query: 129 AYDDSLMCSYHIGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMAQLPQYGEVDIIEECS 188
            YD++L C YH GA+GH ++QC  F+ KVQELLD   LTV+Q      Q   +D++E  S
Sbjct: 592 RYDENLTCPYHAGARGHPLEQCSCFKEKVQELLDLKILTVTQS----HQEQRIDVVEYVS 651

Query: 189 SKKDMIKAHK 197
           + +    A+K
Sbjct: 652 TAESSSAAYK 657

[Close]

BLAST of Spg014935 vs. ExPASy TrEMBL
Match: A0A6J1DM29 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia OX=3673 GN=LOC111022231 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-05
Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 2  EEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIAQSSNTMNDPPIRQSIEGTTPKY 61
          +++ +E EKTRKDIEELREK+DAIL+ALE+GK    IA++SN +++PP  Q   G  P +
Sbjct: 3  DDRKSEQEKTRKDIEELREKLDAILLALEKGK---TIAETSNPIHEPPTPQFPPGFEPSF 61

Query: 62 HP 64
           P
Sbjct: 63 RP 61

HSP 2 Score: 88.6 bits (218), Expect = 4.6e-14
Identity = 44/90 (48.89%), Postives = 60/90 (66.67%), Query Frame = 0


Query: 97  VVTPMGELFKILSSNGYIGVERLQLDLGVKAYDDSLMCSYHIGAKGHSIDQCPHFRLKVQ 156
           + TPM ELF+IL  +GY+ VE L  +L  K YD+SL C +H GAKGH+++QC  FR+ VQ
Sbjct: 395 ITTPMEELFEILLGSGYVSVEYLCPNLKYKGYDESLTCPFHAGAKGHALEQCNSFRMIVQ 454

Query: 157 ELLDSHFLTVSQKMAQLPQYGEVDIIEECS 187
           ELLDS  LTV    A   Q   ++++E+ S
Sbjct: 455 ELLDSKILTV----ANSHQKKGINVVEDVS 480

The following BLAST results are available for this feature:

BLAST of Spg014935 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158986.1	8.5e-15	43.33	LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]	[more]
XP_022155744.1	4.2e-14	45.26	uncharacterized protein LOC111022791 [Momordica charantia]	[more]
XP_022157796.1	5.5e-14	39.85	LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]	[more]
XP_022157796.1	2.4e-09	44.55	LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]	[more]
XP_022155098.1	2.1e-05	53.23	LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica ch...	[more]

BLAST of Spg014935 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg014935 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E2J7	4.1e-15	43.33	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1	[more]
A0A6J1DR66	2.0e-14	45.26	uncharacterized protein LOC111022791 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DZ90	2.7e-14	39.85	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1	[more]
A0A6J1DZ90	1.2e-09	44.55	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1	[more]
A0A6J1DM29	1.0e-05	53.23	LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia...	[more]

BLAST of Spg014935 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..28

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg014935.1	Spg014935.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0140640	catalytic activity, acting on a nucleic acid