Spg014924 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAAAAAAAAATGATTTTTCTCCAAAATTTGAAGTTAAAGAATTGGTCTTCCACTGAAAGTTTCTGATCGTCTCCAGACTTTGCTTCTTCACCCACAGTCGCCGGCGAACACATAGATGCAGTTTCTCAGAGGTGTGAAGAAGCCGGCCACGGCGGTGACGCTGGCGGCAGCGGCAGCGGCGATAATTTTCGTAGCGTCAATGCCGTTGGCTTGGTCAAAGGAACAACTCAGCTCGAGGGAATGTGAGGATCTAGGTTTCACAGGCCTTGCCCTCTGTTCTGATTGCCACACTTTAGCTGAATATATCAAAGATCAAGGTGATGCGTTTGATTCACGGCTCGCTCGGTTTTTCTATACTCATTCTTGATTCGGATTTGAATTTATAGCTCTATTACTGCATTTCTTCCCTTTTCCGTTGCTATTTCTCGTGAATTCGCTGCTTCCTAATGGACTTTCTTCCTTTTTTTCCCCTCAATTCTCCGCTTTTGCTTTTGTTTTTGAACGATTGATTGTTCGCCCTGTGGTCGATTTCGATTATGGATTTTTTCCCCCCTTGATTTGGATTTTGGATTTCCGGATTACTTTGTTATAGTCTGATGTGCAAGTGTTGGTGTTAATTACGATATCTTCAATCGATTTCTTAGTGATTGTGGATAGAGTTTTCTGATGTTAGTTCTTATTTTGTTCGAAAAGGCGGTACTGTGGAGTTGAGAGACCTTTACCTAGTACCTAATTCTGTGATTACCTGGGAATTTGTTAGGGAAGAAAATGGTTCCTGAAATTCTGATGTGATAATTCAACTTTTGTACAAAAGTTTTCAATAGATTATAGAACGGTTTGCAGAGATCAGATTAGTGGAAGAAAAAAGTCCTCAACTTTTTAAAGTGATTTGTTGATTATATTTTTCATAAATCACATATCATGTCTTTCTGAGATTTGAATGCAATTTGTGATTGTTAGTGCTAGTCCTTTTGGTGAATAAGTTTATTTTTAATTCTGGCAATGACTTAAAAAAAAAAAAAAAAAAAAAAATCTGGCAATGGCTTCTTATCTCCATCCCCACTGACCATATAATCTTTTGATTGATTGAAACTTTCTGTGTGGAAAAGGAAACATCCCTGTTTGATTGCCAAGCCCCTGCATAGTTTTAGAGGGCAAAGATCTAAGGGGGGTTTTTTGGAACTATTTTGAGAAAAAAATGTTTATATTTTAGCGCAAATGTTTTGTGAAAACATCTTCAAATGTTTTTAAAAAGTTGTACAGTTGTTTTTTTGTTATGTTTTTACATATCTCTATTTTTTTAGTTAAATTGAAGATGTTCTTTCTTCCAAAATCATGTACTTCTGAGTGTTGATTCCAAGTGCACAATAATGTTAATTGTTACAAGTCATCTGATTGCAACTCGTAAAGAATAGGAAGCTGTTTTTTTAGACCGTGTCTTCTAAGTAGCCATATTTTCTAAACGTAAAAATGCATAGACTGTTGGTTGGAGAAATCATTTTCTAATAAAGGCACTCTATAATCGTACGCCCCACCTCTTCTCCCAATTACAGTTCCTTAAAATAGTTTTACAAACAACTGTAGTAATCTGTTTTTCAAAATAGAACCCGAACAGCAGTTTTTGGCTACAAGAAAATGCTAAGGCAGTTGGCTGGAGGAAATGTTTTTGCATGCATCAAACTAGTTCTATCAATTGAACATTATTCTTTTAAAAGCACCTCCCCCCCCAACCCCCTGTTCCGTGAGCTTCAACCATTTATGCAACTGCTTTTGGAAACAAGAGATAGATTGCGAGATGGTGTATTGCCTTTTAAAATCATAGTTAAAGAATGTGCAAGTTTCTAATAGAGTTCTGAAAAAAAAACGTGGTAAAAAATGTGATAATACAAAATGTTGATTACAGTGATTGTTGCACTGGCAACTGCAACACTGGATCTATGAAGGCAACATGATGACTCCAAATAGTCTTTATCATATTCAACTGATAGTATGCAGAATCTGCAATAATCTCGTGTCGGCTTCAGTAATAGTTTTGAAGTGCATTGTTTTTAATATTACACGTTGTCCTCAATGTCCAAATTTGTATTGCAGAATTAGTGTCAGACTGTTTGAAGTGTTGCTCGGAGGATTCTGATGATGCCACGAGTAAGGTACACAAAATGTTATAAATGTTCTAATTTCTGGAGGCTGGATTTCATCAACTTACTATTCCATTTCTGGATTGTGTATCATGCTTCTAAACCGAATGCTTGTGCATCCATGTGGTAGACATGCCTATTCAAACATGTTGGTTACTACGTCTGAACTTTTATGTCTTTCTTACATGCTACGCAATCGGGAGGTGCCATTTCACAAGATTAACAATTTATGCATGTACGTAATTATCACAACTATGGTCCGAAAAAACCGTCATGGATTAGCCTAGTGGTCAATAAGGGCCATGGAAAAAATAAAGGGTTTAAAGTGAATGAGTTCAATCCATGATGGTCACCTACCTAGGAATAAGATAATATCCAACGTGTTTCCTGACAATCAAATGTAGTAGGGTCAGACGGTTGTCCCGTGACATTAGTCAAAGTGCGTGCAAGTTGGTCCAAAAACTCACGGATAAAAAATTAATAAAATAAAAGGGTCCGAAATAAGGTCTCGGTAAACAAGGGGACTAACTCTTCTGTAGAAAAAGGTGATTCAAGGGATGTGCAACGCATTTATCAATGCATATTACAACTCTGTTGAATATGGGTGGTTAGAAATACTTGGCTTGTCGATGAGCAAGTGTAATCTATTAATGCCCCATCTTTTGTAAATTTATTTTAATATTCTTATATCAGTGTTTCAAACTTCTTTACAGATATTCCTCAAATTACTTATTCACAAGAGCCTAATAGTTCCCCTTTTCCATCTCATCGGAAGGAAAGCCTTTCTTTTTGTTCCACTTAGCCCTATACCCCCCTCTACAATGCTATAGTGATAGGTTCGATTGGAACTAGACGATTCTATTCGGTCAAATACCTAGCATCAAACTACCACCTTCCTTTAATTTCAGTATCTCTAAACAAATTCCTGGTTCCAAAAATTTTGTCCATCATGGTAATAGTTCGATAGAAGTGGCTGATATACATCCAGATTGAGTTTTGAGTTCTGCCCTCCCCCCAATTCAGTACTCTGTTGTTGGTTGTATTTTATGACTATATGTGCATTTGTCTGTCTTTTCATTTATTTGGACAAAGGATGAAAACCAATTAACTAAGTTTTTTTCATTTATTTGGACAAGGGATGAAAGCCAATTAACTAAGTTTGTTAACTGCAGATAACTTATTCTGGTGCTGTGCTGGAGGTCTGCATGAGGAAACTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGATCAATTCCCTTCAGTTAAGGTCCAATATATCTTCAACTCTCCGCCGAAGCTGGTTATGCTAGATGATGAGGGCCAACATAAAGAAAGCATCAGGTAACTTTCTAAATGGCCAAAAACTTCTCACTGTAGTGGTGGAGAGACCCTATTTAGATCGTAAATATTGATGTTTTCTTCTTTCTGAGAACCAATAAACAAAAGAATACAAAAAGAAAAGCTTAAACAAAAAACTGAAACTAGAGTCTCAAAGAAGAGCTCTGACTATTAGAAATAAGAGAAAAGAGATGGTTACAATATACTTTTGGATTAGACACCCAAGGAGGGACGTTAAATCTATTCGAAGGTCGCATCTGCATCTAGGGAAAGTTTATTCAATTAGACTGCTATAATCTAGCTACCTCTTAATCATCGTTGGATGTGAATTCAAAAATTGCAAGTCTCTCAATAATCAATCGATACAAATTCTTGCAGTATTTTTGTAGTTTCTTTTTCATACATTCAACAGTGCAAAACTATCGGTCACAATGTAGCAGCCTCGTTGAATAATTTCTTCCATCCAAGATGGTTCCACTCTATTCCCCTAAAAGTTGTCTTATTTCTATGGTAAATGTTGATGTTTGCTCAACCAAATGGCTTTTTTATATTTGTCTAGAAGAATGCTTACATCCATAACATAGTCTCTCAAAGCAAAATATGCACTATTGCTTTAGCTTTGTGGGTAATGACCATTGATAATTGATATTGCACATAACGTGACAGAAAATTTAACCCTTTTTTTTTGTTTTTGTTTTGTAGGATTGACAATTGGAAACGTGAACATATTTTGCAGTTCCTGCAAGAGAAGGTTAAGCGATCTTCAGCAATTTAAGGCTCTCTCTCTTTTCTTTTCTTAATCTCTGTAAAAAAAAACTTGATGCAGAAGTTGAATGAAACAATTATCAACCAAAAAACTTGAGCCGAACATTAATTTTTGTCAATTTCAAGGATAGTTGGAAAGATAACGGATTTACTTGTCTAAATTTTGAACTCTATAAATCC ATGCAGTTTCTCAGAGGTGTGAAGAAGCCGGCCACGGCGGTGACGCTGGCGGCAGCGGCAGCGGCGATAATTTTCGTAGCGTCAATGCCGTTGGCTTGGTCAAAGGAACAACTCAGCTCGAGGGAATGTGAGGATCTAGGTTTCACAGGCCTTGCCCTCTGTTCTGATTGCCACACTTTAGCTGAATATATCAAAGATCAAGAATTAGTGTCAGACTGTTTGAAGTGTTGCTCGGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCTGTGCTGGAGGTCTGCATGAGGAAACTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGATCAATTCCCTTCAGTTAAGGTCCAATATATCTTCAACTCTCCGCCGAAGCTGGTTATGCTAGATGATGAGGGCCAACATAAAGAAAGCATCAGGATTGACAATTGGAAACGTGAACATATTTTGCAGTTCCTGCAAGAGAAGGTTAAGCGATCTTCAGCAATTTAA ATGCAGTTTCTCAGAGGTGTGAAGAAGCCGGCCACGGCGGTGACGCTGGCGGCAGCGGCAGCGGCGATAATTTTCGTAGCGTCAATGCCGTTGGCTTGGTCAAAGGAACAACTCAGCTCGAGGGAATGTGAGGATCTAGGTTTCACAGGCCTTGCCCTCTGTTCTGATTGCCACACTTTAGCTGAATATATCAAAGATCAAGAATTAGTGTCAGACTGTTTGAAGTGTTGCTCGGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCTGTGCTGGAGGTCTGCATGAGGAAACTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGATCAATTCCCTTCAGTTAAGGTCCAATATATCTTCAACTCTCCGCCGAAGCTGGTTATGCTAGATGATGAGGGCCAACATAAAGAAAGCATCAGGATTGACAATTGGAAACGTGAACATATTTTGCAGTTCCTGCAAGAGAAGGTTAAGCGATCTTCAGCAATTTAA MQFLRGVKKPATAVTLAAAAAAIIFVASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI Homology
BLAST of Spg014924 vs. NCBI nr
Match: XP_038875398.1 (selenoprotein F [Benincasa hispida]) HSP 1 Score: 323.9 bits (829), Expect = 8.1e-85 Identity = 157/171 (91.81%), Postives = 165/171 (96.49%), Query Frame = 0
BLAST of Spg014924 vs. NCBI nr
Match: XP_008460012.1 (PREDICTED: 15 kDa selenoprotein [Cucumis melo]) HSP 1 Score: 317.4 bits (812), Expect = 7.6e-83 Identity = 155/171 (90.64%), Postives = 163/171 (95.32%), Query Frame = 0
BLAST of Spg014924 vs. NCBI nr
Match: XP_022960129.1 (selenoprotein F-like [Cucurbita moschata]) HSP 1 Score: 314.3 bits (804), Expect = 6.4e-82 Identity = 154/171 (90.06%), Postives = 162/171 (94.74%), Query Frame = 0
BLAST of Spg014924 vs. NCBI nr
Match: XP_023004122.1 (selenoprotein F-like [Cucurbita maxima]) HSP 1 Score: 313.9 bits (803), Expect = 8.4e-82 Identity = 154/171 (90.06%), Postives = 161/171 (94.15%), Query Frame = 0
BLAST of Spg014924 vs. NCBI nr
Match: KAG6592972.1 (Selenoprotein F, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 313.2 bits (801), Expect = 1.4e-81 Identity = 153/171 (89.47%), Postives = 162/171 (94.74%), Query Frame = 0
BLAST of Spg014924 vs. ExPASy Swiss-Prot
Match: A8YXY3 (Selenoprotein F OS=Bos taurus OX=9913 GN=SELENOF PE=2 SV=2) HSP 1 Score: 95.9 bits (237), Expect = 4.7e-19 Identity = 48/132 (36.36%), Postives = 77/132 (58.33%), Query Frame = 0
BLAST of Spg014924 vs. ExPASy Swiss-Prot
Match: O60613 (Selenoprotein F OS=Homo sapiens OX=9606 GN=SELENOF PE=1 SV=4) HSP 1 Score: 95.1 bits (235), Expect = 8.0e-19 Identity = 48/132 (36.36%), Postives = 77/132 (58.33%), Query Frame = 0
BLAST of Spg014924 vs. ExPASy Swiss-Prot
Match: Q802F3 (Selenoprotein F OS=Danio rerio OX=7955 GN=selenof PE=2 SV=2) HSP 1 Score: 94.0 bits (232), Expect = 1.8e-18 Identity = 48/132 (36.36%), Postives = 77/132 (58.33%), Query Frame = 0
BLAST of Spg014924 vs. ExPASy Swiss-Prot
Match: A1Z623 (Selenoprotein F OS=Sus scrofa OX=9823 GN=SELENOF PE=2 SV=2) HSP 1 Score: 94.0 bits (232), Expect = 1.8e-18 Identity = 48/132 (36.36%), Postives = 76/132 (57.58%), Query Frame = 0
BLAST of Spg014924 vs. ExPASy Swiss-Prot
Match: Q923V8 (Selenoprotein F OS=Rattus norvegicus OX=10116 GN=Selenof PE=1 SV=3) HSP 1 Score: 88.2 bits (217), Expect = 9.8e-17 Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = 0
BLAST of Spg014924 vs. ExPASy TrEMBL
Match: A0A1S3CC00 (15 kDa selenoprotein OS=Cucumis melo OX=3656 GN=LOC103498956 PE=3 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 3.7e-83 Identity = 155/171 (90.64%), Postives = 163/171 (95.32%), Query Frame = 0
BLAST of Spg014924 vs. ExPASy TrEMBL
Match: A0A6J1HA08 (selenoprotein F-like OS=Cucurbita moschata OX=3662 GN=LOC111460968 PE=3 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 3.1e-82 Identity = 154/171 (90.06%), Postives = 162/171 (94.74%), Query Frame = 0
BLAST of Spg014924 vs. ExPASy TrEMBL
Match: A0A6J1KPJ2 (selenoprotein F-like OS=Cucurbita maxima OX=3661 GN=LOC111497549 PE=3 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 4.1e-82 Identity = 154/171 (90.06%), Postives = 161/171 (94.15%), Query Frame = 0
BLAST of Spg014924 vs. ExPASy TrEMBL
Match: A0A5A7T9G4 (15 kDa selenoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001250 PE=3 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80 Identity = 155/182 (85.16%), Postives = 163/182 (89.56%), Query Frame = 0
BLAST of Spg014924 vs. ExPASy TrEMBL
Match: A0A0A0KA30 (Sep15_SelM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G087180 PE=3 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 3.8e-80 Identity = 150/171 (87.72%), Postives = 159/171 (92.98%), Query Frame = 0
BLAST of Spg014924 vs. TAIR 10
Match: AT1G05720.1 (selenoprotein family protein ) HSP 1 Score: 248.1 bits (632), Expect = 5.3e-66 Identity = 117/164 (71.34%), Postives = 147/164 (89.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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