Spg014893 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg014893
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description39S ribosomal protein L41-A, mitochondrial
Locationscaffold3: 47597466 .. 47600338 (-)
RNA-Seq ExpressionSpg014893
SyntenySpg014893
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGAAATGACATAAGGTAAATATATTTTCAAAATTAATAGAGCGAAGGATAAAAGAAATTGACTTTTTTTTAGAAAAGAATTAACCGAATGAAATACAAAGACTAAAATGAAATGAAACTTATACAAGGATGAAAATGTTTTTTTTTAGTACAACAACATTTGGGGATGAAAAAATTCAAACATCTAACCTCTTGGTCGAGGGTACATGTCATTTACAGCCGATCTATTCTCCTCCCGGCAGGATGAAAATGATATTTAAGCTTAAAAAAAAACCTTATTAGATAAAAAAAATGAAGCATGATAGTTGAGTAAATTGTAATTTAACCTAAAGAGTGGACTAAAAAACAAAAAGACCTAAATAGCGACTCAAAACTCAAAAGACCAATTTCCCGTCTTCTCCCTCCTTCCCTGTTCGATCAACGGCAACACTCAGCGAAGACTCACGGACCCGTCTGATAGCCCCCAGCCGAAGAGATTTCAGGGTTCTGGTATTCTTCTTTTTGTCTTCGAATTCTTGAGATTGGGGCGGGAGAAATGGCGTTGGGACTGATTTTGGGACTCGGGAGAGCAATGCGGAGAAAGCGTACGTCTTCTCTGGACATCCTTTCGTCCAAAAGAGCTCCACGAGATTATTATAAGGGCAAGAATTGCAAACCTACTGGTTTTCATACGCGGAAAGGTATGGATAGCTTTTCTCCTGCACCAATTCTAATATAATTTTAGGTTCTATGTTTATTTCTTTTCAATCTTCGATGATTTTAGTGTATTGTTTTTTTTTTTTTTTTATTTCTCTGTCGAAAGTCAATTATGTTTTGGTGCTATAGTAATTGAGTATGAAGAATTTAGAGTTAGTGCCGCCAGATCCAATTCGATAAGGTAATTTATTGATAACTTAAGAAGATAAATAGTGCTTATAGGAATGTGATTAGTAGGTTGCAGAATGAGTTCTAATTCTAGATTTTACTACTTGTATGGTTCTTGAAACTTTTCCTGACTGCTACTAAAATCGTTCGAGAATAAGGAATGAAATAAAGACTTTAAGTGTAAAAATTGTTCAAGGGTGTGGGTTTAAAATGTAAAAATTTCTTGCAGGTGGATACGTAGTGGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAGGTATTTTTCCTCTACATTATTTATTGTAGAATTTAGAGCTGATTTCTCCCTATCCTACCCCTTACATATAAGTCCTCTGAATATGATTGTGAAGATTAAAATAGGCAACTGATGAAAGAGGGATAATACAGAATCTATTTTGGCTTTGTGTGCTTCCATTGTTCTTGTGTTGCCTTTGGTTCTCCCTTTTAAGTTTTGTTAATTTTAGATGATTTCCTGAATTGTGATTTCTGATTTGTTTTCTTTCCTTATTTCCTTTTAATCTATTATTTCTGGTTAGATACTATGTTTCTCTCCCGATGTCAGTGACACATTTGTTTTGTACTTATTCTAGAGGCCTTATTTTAGTGGATTGAATCATTTTCTCTAATGGGATTCCCTTTTGGGGGCTTGGATTTTGCATGTCCGTGGATTATTTTATTTTTTCTCAATAAAAGTATGGTTCTTTATGAAATATATATATATTTCTCGTTGTGTATTCTCTGTGTGATTTTAGTGCAGAGATTTTATGCAACAATTTTTCTTGATAGTTTCTCTAACGTTGCTTTGAGTTAAATACTTGTGGGGAAAGCAGATCTAGGGCACTTAAGTACGCTAAGGAAATTTGTTTTTGGCTGGTGTGGTGGTAGCAGGCACCTTAACCTTTGAAGCTTTGCTCCTTTTTTGAGAGTTTTATTGTAATTCTGTATAACAAGTCGTGCATCAATTTGAGAAGTCAAGATCGACAGTTTCTAACACCTCACAATTTCTATTCCATCCAACAATTTGGTGTTTATTTGTGTATGTTTCATGTTTGGAACATCAACATGCATAAGTATATCATTGGTTGATAATAGTTCATTATAGGGTGGCCCACAGATCCTGTTTAGAGTGAAACTCGAACTTTTGGAAAAAACCAGACCTTACCCTTGATCCTACTATTCTTGTTAAGTTCTTAGAAAACACTATAGACTTCCGGTAGTGTCAAGTCAGTTACTTTTTATTTCACCTAGAACTATGCACGTTAACTATAGTTATGTTAACTTGAAGGAGTGGACGTCAATTTCGAGTTTTCAATATGCTGCCTAGGTTTGCATATGAGAATTGAAATCTGCCTAAAGATATAATATGTTCTTTGTTTGCAGCTCAAGCCTTATGTATCTCAATGTCCGATAGAAGTCAAGACAAGTGAGGGCAGCGAATCAGCTAAATCATAAGCGAAGAGGCTTGTGGTCTTTTCATTCTATAGCAATTGGCTTCATGTCGATTTTAGGCGATTTGGTCGGAATCAAGGGGGTAAAATGAGAGGTTTCGTACACTTGTAGTGATTCAGTGAAATGATGTATAAACCCCCTGTCCTATATGAATAGAAGAAGCCTTCAATTTTTGCTTCGTTTCTTTTATTCTTCTAAAATACATTGATGTTTTATTTTATTGAGTTAAAAGGAACTGTGAGGGTTAGATTTGAATTTTACTCGCTCAAATCCATAATGTGTTATCTTTTTTTTTTTTTCTTTTTTTTAGTTCAATAACATTTAGAGGTGGAGGAATTCAAACCTCTAATCTTTTGGTTGGGGTACATGTCAATTACCGTTGAACTATGCTCACTTTGGCATGTCTTACCCAATTGAGCTATATTCAAATTGACTCTTCTAAAATACAATTGAGATTGTTGCTTTATTGTTGCTTTCTTTGCTCTGGGTGTAAATCGAACTCTCTTATCTACTCTTATAGT

mRNA sequence

ATGGCGTTGGGACTGATTTTGGGACTCGGGAGAGCAATGCGGAGAAAGCGTACGTCTTCTCTGGACATCCTTTCGTCCAAAAGAGCTCCACGAGATTATTATAAGGGCAAGAATTGCAAACCTACTGGTTTTCATACGCGGAAAGGTGGATACGTAGTGGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAGCTCAAGCCTTATGTATCTCAATGTCCGATAGAAGTCAAGACAAGTGAGGGCAGCGAATCAGCTAAATCATAA

Coding sequence (CDS)

ATGGCGTTGGGACTGATTTTGGGACTCGGGAGAGCAATGCGGAGAAAGCGTACGTCTTCTCTGGACATCCTTTCGTCCAAAAGAGCTCCACGAGATTATTATAAGGGCAAGAATTGCAAACCTACTGGTTTTCATACGCGGAAAGGTGGATACGTAGTGGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAGCTCAAGCCTTATGTATCTCAATGTCCGATAGAAGTCAAGACAAGTGAGGGCAGCGAATCAGCTAAATCATAA

Protein sequence

MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS
Homology
[Close]
BLAST of Spg014893 vs. NCBI nr
Match: XP_038897038.1 (39S ribosomal protein L41-A, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 183.3 bits (464), Expect = 9.3e-43
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0 

Query: 1  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS 94
          YVVPDLTDFKLKPYVSQCPIEVKTS+ +ESAKS
Sbjct: 61 YVVPDLTDFKLKPYVSQCPIEVKTSDNNESAKS 93

[Close]
BLAST of Spg014893 vs. NCBI nr
Match: XP_022143129.1 (39S ribosomal protein L41-A, mitochondrial [Momordica charantia] >XP_022143137.1 39S ribosomal protein L41-A, mitochondrial [Momordica charantia])

HSP 1 Score: 183.3 bits (464), Expect = 9.3e-43
Identity = 90/93 (96.77%), Postives = 91/93 (97.85%), Query Frame = 0 

Query: 1  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS 94
          Y+VPDLTDFKLKPYVSQCP EVKTSE SESAKS
Sbjct: 61 YIVPDLTDFKLKPYVSQCPTEVKTSEASESAKS 93

[Close]
BLAST of Spg014893 vs. NCBI nr
Match: XP_004135839.1 (39S ribosomal protein L41-A, mitochondrial [Cucumis sativus] >XP_031744891.1 39S ribosomal protein L41-A, mitochondrial [Cucumis sativus] >KGN45301.1 hypothetical protein Csa_015853 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 1.8e-41
Identity = 87/93 (93.55%), Postives = 91/93 (97.85%), Query Frame = 0 

Query: 1  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS 94
          YVVPDL+DFKLKPYVSQCPIE+KTS+ +ESAKS
Sbjct: 61 YVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS 93

[Close]
BLAST of Spg014893 vs. NCBI nr
Match: XP_022982189.1 (39S ribosomal protein L41-A, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 177.6 bits (449), Expect = 5.1e-41
Identity = 87/93 (93.55%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 1  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGL R+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS 94
          YVVPDLTDFKLKPYVSQCPIE KTSE  ES KS
Sbjct: 61 YVVPDLTDFKLKPYVSQCPIEAKTSEAGESTKS 93

[Close]
BLAST of Spg014893 vs. NCBI nr
Match: XP_008461075.1 (PREDICTED: 39S ribosomal protein L41-A, mitochondrial-like [Cucumis melo])

HSP 1 Score: 177.2 bits (448), Expect = 6.7e-41
Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 0 

Query: 1  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS 94
          YVVPDL+DFKLKPYVSQCPIE+ TS+ +ESAKS
Sbjct: 61 YVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS 93

[Close]
BLAST of Spg014893 vs. ExPASy Swiss-Prot
Match: Q6DJI4 (39S ribosomal protein L41-A, mitochondrial OS=Xenopus laevis OX=8355 GN=mrpl41-a PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.6e-08
Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = 0 

Query: 3  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYV 62
          +GLI  + R + R      +  +SK+ P  Y KG+  K  G+ T  G +V V E +P +V
Sbjct: 1  MGLISKIARGLVRGADRMAE-CTSKQGPNSYNKGRGAKKIGYLTASGKFVKVREMVPVFV 60

Query: 63 VPDLTDFKLKPYVS 77
          VPDLT FKLKPYVS
Sbjct: 61 VPDLTGFKLKPYVS 73

[Close]
BLAST of Spg014893 vs. ExPASy Swiss-Prot
Match: Q6INF3 (39S ribosomal protein L41-B, mitochondrial OS=Xenopus laevis OX=8355 GN=mrpl41-b PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.7e-08
Identity = 33/74 (44.59%), Postives = 43/74 (58.11%), Query Frame = 0 

Query: 3  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYV 62
          +GLI  + R + R      +  +SK  P  Y KG+  K  G+ T  G +V V E +P +V
Sbjct: 1  MGLITKIARGLVRGADRMAE-CTSKLGPNSYNKGRGAKKIGYLTSSGKFVKVREMVPVFV 60

Query: 63 VPDLTDFKLKPYVS 77
          VPDLT FKLKPYVS
Sbjct: 61 VPDLTGFKLKPYVS 73

[Close]
BLAST of Spg014893 vs. ExPASy Swiss-Prot
Match: Q9CQN7 (39S ribosomal protein L41, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl41 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.5e-08
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0 

Query: 25 SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS 77
          +SKR PR + K +  K TG +T    +V + E +P +VVPDLT FKLKPYV+
Sbjct: 22 TSKRGPRTFTKSRGAKKTGIYTSDRKFVQIKEMVPEFVVPDLTGFKLKPYVN 73

[Close]
BLAST of Spg014893 vs. ExPASy Swiss-Prot
Match: Q5BJX1 (39S ribosomal protein L41, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl41 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.5e-08
Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 0 

Query: 25 SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS 77
          +SKR PR + K +  K TGF+T +  +V + E +P +VVPDLT FKLKPYV+
Sbjct: 22 TSKRGPRTFTKSRGAKKTGFYTNR-KFVQIKEMVPEFVVPDLTGFKLKPYVN 72

[Close]
BLAST of Spg014893 vs. ExPASy Swiss-Prot
Match: Q8IXM3 (39S ribosomal protein L41, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL41 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.5e-07
Identity = 28/54 (51.85%), Postives = 35/54 (64.81%), Query Frame = 0 

Query: 25 SSKRAPRDY--YKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS 77
          +SKR PR +   KG+  K  GF T    +V + E +P +VVPDLT FKLKPYVS
Sbjct: 22 TSKRGPRSFRGRKGRGAKGIGFLTSGWRFVQIKEMVPEFVVPDLTGFKLKPYVS 75

[Close]
BLAST of Spg014893 vs. ExPASy TrEMBL
Match: A0A6J1CNE9 (39S ribosomal protein L41-A, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111013068 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.5e-43
Identity = 90/93 (96.77%), Postives = 91/93 (97.85%), Query Frame = 0 

Query: 1  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS 94
          Y+VPDLTDFKLKPYVSQCP EVKTSE SESAKS
Sbjct: 61 YIVPDLTDFKLKPYVSQCPTEVKTSEASESAKS 93

[Close]
BLAST of Spg014893 vs. ExPASy TrEMBL
Match: A0A0A0KBX4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433300 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.5e-42
Identity = 87/93 (93.55%), Postives = 91/93 (97.85%), Query Frame = 0 

Query: 1  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS 94
          YVVPDL+DFKLKPYVSQCPIE+KTS+ +ESAKS
Sbjct: 61 YVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS 93

[Close]
BLAST of Spg014893 vs. ExPASy TrEMBL
Match: A0A6J1J3V5 (39S ribosomal protein L41-A, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111481090 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.5e-41
Identity = 87/93 (93.55%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 1  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGL R+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS 94
          YVVPDLTDFKLKPYVSQCPIE KTSE  ES KS
Sbjct: 61 YVVPDLTDFKLKPYVSQCPIEAKTSEAGESTKS 93

[Close]
BLAST of Spg014893 vs. ExPASy TrEMBL
Match: A0A1S3CEC5 (39S ribosomal protein L41-A, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103499774 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.2e-41
Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 0 

Query: 1  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEVKTSEGSESAKS 94
          YVVPDL+DFKLKPYVSQCPIE+ TS+ +ESAKS
Sbjct: 61 YVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS 93

[Close]
BLAST of Spg014893 vs. ExPASy TrEMBL
Match: A0A2C9U139 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G063900 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.5e-41
Identity = 85/92 (92.39%), Postives = 89/92 (96.74%), Query Frame = 0 

Query: 1  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          M LGLILG+GRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPN
Sbjct: 1  MPLGLILGIGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVIVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEVKTSEGSESAK 93
          YVVPDLTDFKLKPYVSQCP EVKT+E SE+AK
Sbjct: 61 YVVPDLTDFKLKPYVSQCPREVKTTESSEAAK 92

[Close]
BLAST of Spg014893 vs. TAIR 10
Match: AT5G39800.1 (Mitochondrial ribosomal protein L27 )

HSP 1 Score: 155.6 bits (392), Expect = 1.9e-38
Identity = 71/89 (79.78%), Postives = 83/89 (93.26%), Query Frame = 0 

Query: 4  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVV 63
          GL++G+GR+ RRKR+SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVV
Sbjct: 6  GLLMGIGRSFRRKRSSSLDILSPKRAPRDFYKGKNCKPTGFHTRKGGYVVQPDKLPNYVV 65

Query: 64 PDLTDFKLKPYVSQCPIEVKTSEGSESAK 93
          PDLT FKLKPYVSQCPI+V T+E +E++K
Sbjct: 66 PDLTGFKLKPYVSQCPIQVNTNESTEASK 94

[Close]
BLAST of Spg014893 vs. TAIR 10
Match: AT5G40080.1 (Mitochondrial ribosomal protein L27 )

HSP 1 Score: 154.5 bits (389), Expect = 4.3e-38
Identity = 70/89 (78.65%), Postives = 82/89 (92.13%), Query Frame = 0 

Query: 4  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVV 63
          GL++G+GR+ RRKR SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVV
Sbjct: 6  GLLMGIGRSFRRKRASSLDILSPKRAPRDFYKGKNCKPTGFHTRKGGYVVQPDKLPNYVV 65

Query: 64 PDLTDFKLKPYVSQCPIEVKTSEGSESAK 93
          PDLT FKLKPYVSQCP++V T+E +E++K
Sbjct: 66 PDLTGFKLKPYVSQCPLQVNTNESTEASK 94

[Close]
BLAST of Spg014893 vs. TAIR 10
Match: AT4G09012.1 (Mitochondrial ribosomal protein L27 )

HSP 1 Score: 144.4 bits (363), Expect = 4.5e-35
Identity = 71/93 (76.34%), Postives = 81/93 (87.10%), Query Frame = 0 

Query: 1   MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
           M LGL+ G+GR  RRKR SSLDILS KRAPRD+YKGKNCKP GFHTRK GYVV P+KLPN
Sbjct: 75  MTLGLLFGIGRTFRRKRASSLDILSPKRAPRDFYKGKNCKPPGFHTRK-GYVVQPDKLPN 134

Query: 61  YVVPDLTDFKLKPYVSQCPIEV-KTSEGSESAK 93
           YVVPDLT FKLKPYVSQCP++V KT+E +E++K
Sbjct: 135 YVVPDLTGFKLKPYVSQCPLDVNKTNESTEASK 166

The following BLAST results are available for this feature:
BLAST of Spg014893 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038897038.19.3e-4396.7739S ribosomal protein L41-A, mitochondrial-like [Benincasa hispida][more]
XP_022143129.19.3e-4396.7739S ribosomal protein L41-A, mitochondrial [Momordica charantia] >XP_022143137.1... [more]
XP_004135839.11.8e-4193.5539S ribosomal protein L41-A, mitochondrial [Cucumis sativus] >XP_031744891.1 39S... [more]
XP_022982189.15.1e-4193.5539S ribosomal protein L41-A, mitochondrial-like [Cucurbita maxima][more]
XP_008461075.16.7e-4192.47PREDICTED: 39S ribosomal protein L41-A, mitochondrial-like [Cucumis melo][more]
BLAST of Spg014893 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6DJI41.6e-0844.5939S ribosomal protein L41-A, mitochondrial OS=Xenopus laevis OX=8355 GN=mrpl41-a... [more]
Q6INF32.7e-0844.5939S ribosomal protein L41-B, mitochondrial OS=Xenopus laevis OX=8355 GN=mrpl41-b... [more]
Q9CQN74.5e-0850.0039S ribosomal protein L41, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl41 PE=1... [more]
Q5BJX14.5e-0851.9239S ribosomal protein L41, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl41... [more]
Q8IXM36.5e-0751.8539S ribosomal protein L41, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL41 PE=1 ... [more]
BLAST of Spg014893 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CNE94.5e-4396.7739S ribosomal protein L41-A, mitochondrial OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A0A0KBX48.5e-4293.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433300 PE=3 SV=1[more]
A0A6J1J3V52.5e-4193.5539S ribosomal protein L41-A, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A1S3CEC53.2e-4192.4739S ribosomal protein L41-A, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A2C9U1395.5e-4192.39Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G063900 PE=3 SV=... [more]
BLAST of Spg014893 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G39800.11.9e-3879.78Mitochondrial ribosomal protein L27 [more]
AT5G40080.14.3e-3878.65Mitochondrial ribosomal protein L27 [more]
AT4G09012.14.5e-3576.34Mitochondrial ribosomal protein L27 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019189Ribosomal protein L27/L41, mitochondrialPFAMPF09809MRP-L27coord: 24..85
e-value: 2.3E-18
score: 66.0
IPR019189Ribosomal protein L27/L41, mitochondrialPANTHERPTHR21338MITOCHONDRIAL RIBOSOMAL PROTEIN L41coord: 1..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg014893.1Spg014893.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005762 mitochondrial large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome