Spg014831 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg014831
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	trafficking protein particle complex subunit 2-like protein
Location	scaffold3: 31830998 .. 31834088 (-)
RNA-Seq Expression	Spg014831
Synteny	Spg014831

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTGGGATACAATGGTTCACGAGTATTTTTTTTATAATTTAACATTTTTTTTCGAAGGACCTATTTGAAACTTCCTTTTTCTTCTCACCCCTTCGTGGTATCGCAACCGGGAAATTCGCATAGCCCAGCAGAAGAAATCCAACCGGCCACCGTCGAAGATGATCGTCTGCGTCGCCGTCGTCGGCCACCAGGTGCGACCATATTTTCTGGATCCGAAAGAATTTCATATCTGTTTATACGAAAAGATTTGTGATCCTTTTTCAATTCGGGCCGAGCTAACAGAACAACCCCCTCTACATTCAAAGCTTCACGGAGGCCGATGATGCTCTCAAGCTCCACCACATTGTTCACTGTTCGCTGGATGTCGTCGATGAGCGAGGTATAATTCTTGCTTGCCTTGGTGTTTTGTTGCTTGTAATTAGATCTCGTTTTCGTGATGATTTTCAAACTTTGACGATTTTTGTGTCTTGCGGACTTCAATTCTTTCTTCTGATATTGCTTGTGTTGTTGCTACTAGTGAACAATCCGAGAAAATCTGGGCCGACCTTGAACGAGACCTTTCTCGGTCTTCTTTATCCGACTGAAAATTACAAAGTGTGAGTGAGATCGTTTCTGTGGATATTACGAATTAGTCAGGGGTTTTTTCATTTTCATATCAAGTAGGATCAGAATGTTTCTTCCTTTCTATTTCAATTGGAGTGGACCTTTAATGTTCTGTATGATCGAACTCATTTCCAGGTATGGCTATTTGACTAATACCAAAGTGAAGTTTATTATGGTGACCACAGATCTAGATGTCAGAGATGCTGATGTGAGAAATGTGAGTACCATTATGGATTTGCAATTTTCTACAGCAGTATAGATCTTTAGAATTTTCACTTGTGAACTATCACTGTAAGGTAACTCTGAAGATGAAAAATTCTAGGGTGTTGTTTATTAGTGAAGATGTTTGTGATGCAAGCACTTCACGTCTGGCTCCTCTCATTTGTTGTCCTTTAGAAGTTCTCTTTCAACGATAAAGGGTAGCCTTTCTCAAGCTAGCTGTTTTACTAGTGATGTGAACATAATATATTCCTAGAGAGGAGTCCTATCACAATTGTTTATACTTCCTTCACGGCCAGTTAAAACTACAATCGGTGTCTGTTGGTATCTCGAACGACCTTCTTATGCTCGAAATGTACACACCCTTTGATCACTAAGTACGCATCATCTGATCATAGATTATTGTCTATGAAGATGAGACATTTCAGGCTATTGTCTCTATCAAGACGTTGGTGATTTAGGCAAAATAATATCTCCATGTATTCAGTGTCTATGGATTTTATCTTCTAATGACAGAAGTCATCACAGGGTAGCTAGTTTAGTAAGAAACTGATGTGAACATGCGATAAAATTTCTTAGAACACCACATGGCTGTAGGACAACAGAATAGTGTGCAAACGTTGATTCTTTGTTTTCATATAAGAAAGCACCTTCGCCTCTTATCATTTGTACTATAACTTGATAGTTCAAGTTTGCTTGATTGTATATGTGACAACTCTTGCTCTTCGAGGGAGCTTTGGTTCATGAATTTGAAAAGTCTGAGTTTGATAGTTTGGATTAGGAAGTCTAGTATTTTGTAGCTTATATTTGGATTGTAAGGACCTAAGAAGCACAAACACTTTATTTTGGCTAGCGTGTCTGTGTCTGATACATGTCAAACACTTGGACACTCTGATACTTGTTGGAAACGTATCGGACACTTGTTAGTACAATTGATATGTGGCAAACACTAGTTGTAGGTTCATATCGAACACTTGTGAAGTATACTAAATAGACACAATACTTAACGAAGAAAATAACAAATTTTAAGAGTGAAATACGTTAAACTCATTTTTTAAGCATACAAGCATAAACTTATTGATTTTGAATTTTCTTCTTGTATAAAAAAGATATATATTTTTAAAAATGTGTATTTTTCTAAACGTGTCGGTGTCCTAGATTTAAAAAAAAAAAATGACGTGTCACTGTGTCTGTGTCTCGTGACCGTATCTGTGCTTCTTAGGTAAGAGTCATTTGCGCTTTTGTATAGCTTGTGTTTGGTCTGTGGGTTGATATAAGTTTATGTAGTCAATGGAATTTGTAAACTAGTAGTTCGAGATAAGTCACATATTATAGGTAGGTTCAACTTTCTTATTCCAAGTCAATATAAATTCCAGAAATAGTTATTCCACTTTGTTATTGCAATTGATCCACCCTCTTTCTCTTATATATTGTTTACAACTATTTCTTTTCTGAAAAAGTATTGTAAATTCAGCCAACCTTGGTTCCACCTTGCGTATTTATACACTATGTTGCATACACGAAACTTATCAATAATATGACATCTGTTGCATTCTGTTGCATTCTCGAATTTGTGTCCAGTTTTTCCGGAGATTTCATGCTGCATATGTGGATGCAGTTTCAAACCCATTTCATGTACCAGGTAAGAAAATTACTTCCAAAACTTTTGCAGAAAGTGTGAGCACCATTGTCAAGTCGTTTGGGTTCAGTTCAGCTGTTTGAGTAACCAACCTGGCAATCACTGACGTGTAGAAGTGAAACTTGAATACCGAGTCTGAAAGCCATCGACAGCTATGGTTCATGCTGTGTCTACTCATCTTTCTTGTTCTATTGATTTGAAATATTTTTCTCGAATTGTGTTAAGAAGGATGAAACAAACTGTTGATGTCTTTTTTTTAGTTTTTCGTAAAACAATGCAACTTCATTGATTGGCATTTACAGTTTCTAGTTTGTGCTGTCTTACATGACGTTAGGTGCTATTTTCTTCACATTGCAAGATTGAAAGGTGAGAATGAAGAGGTTGGCTCATGTTTTTAGTAAGTTTATTGTTTATCAAGTTTAGAGTTGGTTAGTCTAAATTTGTACCATTTGTGTTTCCTTAAATGAAAGGTGCAAATTTAGATTTTTGGAACTTTTATTTGATCCATTGGTTATAATTTGTAAACTTTTTGTTGAGTTCAACAATATTTAGGGAGGGAGGATTTGAACTCCTGACCTCTTGGTCAAGTGTATATGCCAAACCCGCTGAGCTATGTTCACTCCTATTTG

mRNA sequence

ATGATCGTCTGCGTCGCCGTCGTCGGCCACCAGAACAACCCCCTCTACATTCAAAGCTTCACGGAGGCCGATGATGCTCTCAAGCTCCACCACATTGTTCACTGTTCGCTGGATGTCGTCGATGAGCGAGGTATAATTCTTGCTTGCCTTGGTGTTTTGTTGCTTGTAATTAGATCTCGTTTTCGTGATGATTTTCAAACTTTGACGATTTTTGTGTCTTGCGGACTTCAATTCTTTCTTCTGATATTGCTTGTGTTGTTGCTACTAGTGAACAATCCGAGAAAATCTGGGCCGACCTTGAACGAGACCTTTCTCGGTCTTCTTTATCCGACTGAAAATTACAAAGTGTATGGCTATTTGACTAATACCAAAGTGAAGTTTATTATGGTGACCACAGATCTAGATGTCAGAGATGCTGATGTGAGAAATATTATTGTCTATGAAGATGAGACATTTCAGGCTATTGTCTCTATCAAGACGTTGTTTTTCCGGAGATTTCATGCTGCATATGTGGATGCAGTTTCAAACCCATTTCATGTACCAGGTAAGAAAATTACTTCCAAAACTTTTGCAGAAAGTGTGAGCACCATTGTCAAGTCGTTTGGGTTCAGTTCAGCTGTTTGA

Coding sequence (CDS)

ATGATCGTCTGCGTCGCCGTCGTCGGCCACCAGAACAACCCCCTCTACATTCAAAGCTTCACGGAGGCCGATGATGCTCTCAAGCTCCACCACATTGTTCACTGTTCGCTGGATGTCGTCGATGAGCGAGGTATAATTCTTGCTTGCCTTGGTGTTTTGTTGCTTGTAATTAGATCTCGTTTTCGTGATGATTTTCAAACTTTGACGATTTTTGTGTCTTGCGGACTTCAATTCTTTCTTCTGATATTGCTTGTGTTGTTGCTACTAGTGAACAATCCGAGAAAATCTGGGCCGACCTTGAACGAGACCTTTCTCGGTCTTCTTTATCCGACTGAAAATTACAAAGTGTATGGCTATTTGACTAATACCAAAGTGAAGTTTATTATGGTGACCACAGATCTAGATGTCAGAGATGCTGATGTGAGAAATATTATTGTCTATGAAGATGAGACATTTCAGGCTATTGTCTCTATCAAGACGTTGTTTTTCCGGAGATTTCATGCTGCATATGTGGATGCAGTTTCAAACCCATTTCATGTACCAGGTAAGAAAATTACTTCCAAAACTTTTGCAGAAAGTGTGAGCACCATTGTCAAGTCGTTTGGGTTCAGTTCAGCTGTTTGA

Protein sequence

MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERGIILACLGVLLLVIRSRFRDDFQTLTIFVSCGLQFFLLILLVLLLLVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNIIVYEDETFQAIVSIKTLFFRRFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAV

Homology

[Close]

BLAST of Spg014831 vs. NCBI nr
Match: XP_022928280.1 (trafficking protein particle complex subunit 2-like protein [Cucurbita moschata] >XP_022989273.1 trafficking protein particle complex subunit 2-like protein [Cucurbita maxima] >XP_023529813.1 trafficking protein particle complex subunit 2-like protein [Cucurbita pepo subsp. pepo] >KAG7015283.1 Trafficking protein particle complex subunit 2-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256.5 bits (654), Expect = 1.9e-64
Identity = 142/207 (68.60%), Postives = 143/207 (69.08%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERGIILACLGVLLLVIRSR 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDER                 
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDER----------------- 60

Query: 61  FRDDFQTLTIFVSCGLQFFLLILLVLLLLVNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120
                                        VNNPRKSGPTLNETFLGLLYPTENYKVYGYL
Sbjct: 61  -----------------------------VNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120

Query: 121 TNTKVKFIMVTTDLDVRDADVRNIIVYEDETFQAIVSIKTLFFRRFHAAYVDAVSNPFHV 180
           TNTKVKFIMVTTDLDVRDADVRN                  FFRRFHAAYVDAVSNPFHV
Sbjct: 121 TNTKVKFIMVTTDLDVRDADVRN------------------FFRRFHAAYVDAVSNPFHV 143

Query: 181 PGKKITSKTFAESVSTIVKSFGFSSAV 208
           PGKKITSKTFAESVSTIVKSFGFSSA+
Sbjct: 181 PGKKITSKTFAESVSTIVKSFGFSSAI 143

[Close]

BLAST of Spg014831 vs. NCBI nr
Match: KAG6589019.1 (Transcription factor ABORTED MICROSPORES, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 256.5 bits (654), Expect = 1.9e-64
Identity = 142/207 (68.60%), Postives = 143/207 (69.08%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERGIILACLGVLLLVIRSR 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDER                 
Sbjct: 603 MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDER----------------- 662

Query: 61  FRDDFQTLTIFVSCGLQFFLLILLVLLLLVNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120
                                        VNNPRKSGPTLNETFLGLLYPTENYKVYGYL
Sbjct: 663 -----------------------------VNNPRKSGPTLNETFLGLLYPTENYKVYGYL 722

Query: 121 TNTKVKFIMVTTDLDVRDADVRNIIVYEDETFQAIVSIKTLFFRRFHAAYVDAVSNPFHV 180
           TNTKVKFIMVTTDLDVRDADVRN                  FFRRFHAAYVDAVSNPFHV
Sbjct: 723 TNTKVKFIMVTTDLDVRDADVRN------------------FFRRFHAAYVDAVSNPFHV 745

Query: 181 PGKKITSKTFAESVSTIVKSFGFSSAV 208
           PGKKITSKTFAESVSTIVKSFGFSSA+
Sbjct: 783 PGKKITSKTFAESVSTIVKSFGFSSAI 745

[Close]

BLAST of Spg014831 vs. NCBI nr
Match: XP_004144858.1 (trafficking protein particle complex subunit 2-like protein [Cucumis sativus] >XP_008447943.1 PREDICTED: trafficking protein particle complex subunit 2-like protein [Cucumis melo] >XP_038887443.1 trafficking protein particle complex subunit 2-like protein [Benincasa hispida] >KGN43262.1 hypothetical protein Csa_020365 [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 7.3e-64
Identity = 141/207 (68.12%), Postives = 143/207 (69.08%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERGIILACLGVLLLVIRSR 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDER                 
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDER----------------- 60

Query: 61  FRDDFQTLTIFVSCGLQFFLLILLVLLLLVNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120
                                        VNNPRKSGPTLNETFLGLLYPTENYKVYGYL
Sbjct: 61  -----------------------------VNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120

Query: 121 TNTKVKFIMVTTDLDVRDADVRNIIVYEDETFQAIVSIKTLFFRRFHAAYVDAVSNPFHV 180
           TNTKVKFIMVTTDLDVRDADVR+                  FFRRFHAAYVDAVSNPFHV
Sbjct: 121 TNTKVKFIMVTTDLDVRDADVRS------------------FFRRFHAAYVDAVSNPFHV 143

Query: 181 PGKKITSKTFAESVSTIVKSFGFSSAV 208
           PGKKITSKTFAESVSTIVKSFGFSSA+
Sbjct: 181 PGKKITSKTFAESVSTIVKSFGFSSAI 143

[Close]

BLAST of Spg014831 vs. NCBI nr
Match: XP_022136317.1 (trafficking protein particle complex subunit 2-like protein [Momordica charantia])

HSP 1 Score: 251.5 bits (641), Expect = 6.2e-63
Identity = 139/207 (67.15%), Postives = 143/207 (69.08%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERGIILACLGVLLLVIRSR 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDV++ER                 
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEER----------------- 60

Query: 61  FRDDFQTLTIFVSCGLQFFLLILLVLLLLVNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120
                                        VNNPRKSGPTLNETFLGLLYPTENYKVYGYL
Sbjct: 61  -----------------------------VNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120

Query: 121 TNTKVKFIMVTTDLDVRDADVRNIIVYEDETFQAIVSIKTLFFRRFHAAYVDAVSNPFHV 180
           TNTKVKFI+VTTDLDVRDADVR+                  FFRRFHAAYVDAVSNPFHV
Sbjct: 121 TNTKVKFIVVTTDLDVRDADVRS------------------FFRRFHAAYVDAVSNPFHV 143

Query: 181 PGKKITSKTFAESVSTIVKSFGFSSAV 208
           PGKKITSKTFAESVSTIVKSFGFSSAV
Sbjct: 181 PGKKITSKTFAESVSTIVKSFGFSSAV 143

[Close]

BLAST of Spg014831 vs. NCBI nr
Match: XP_031127945.1 (trafficking protein particle complex subunit 2-like protein [Ipomoea triloba])

HSP 1 Score: 249.6 bits (636), Expect = 2.4e-62
Identity = 138/206 (66.99%), Postives = 141/206 (68.45%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERGIILACLGVLLLVIRSR 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDER                 
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDER----------------- 60

Query: 61  FRDDFQTLTIFVSCGLQFFLLILLVLLLLVNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120
                                        VNNP+KSGPTLNETFLGLLYPTENYKVYGYL
Sbjct: 61  -----------------------------VNNPKKSGPTLNETFLGLLYPTENYKVYGYL 120

Query: 121 TNTKVKFIMVTTDLDVRDADVRNIIVYEDETFQAIVSIKTLFFRRFHAAYVDAVSNPFHV 180
           TNTKVKFI+VTTDLDVRDADVRN                  FFRRFHAAYVDAVSNPFHV
Sbjct: 121 TNTKVKFILVTTDLDVRDADVRN------------------FFRRFHAAYVDAVSNPFHV 142

Query: 181 PGKKITSKTFAESVSTIVKSFGFSSA 207
           PGKKITS+TFAESVSTIVKSFG SSA
Sbjct: 181 PGKKITSRTFAESVSTIVKSFGLSSA 142

[Close]

BLAST of Spg014831 vs. ExPASy Swiss-Prot
Match: Q54CU7 (Trafficking protein particle complex subunit 2-like protein OS=Dictyostelium discoideum OX=44689 GN=trappc2l PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.4e-25
Identity = 69/203 (33.99%), Postives = 102/203 (50.25%), Query Frame = 0


Query: 2   IVCVAVVGHQNNPLYIQSFTEA---DDALKLHHIVHCSLDVVDERGIILACLGVLLLVIR 61
           IVCVA+VG  NNPL+IQ F+ +   ++ LKLH+IVHCSLD+++++               
Sbjct: 4   IVCVAIVGKGNNPLFIQDFSSSITDENKLKLHYIVHCSLDIIEDK--------------- 63

Query: 62  SRFRDDFQTLTIFVSCGLQFFLLILLVLLLLVNNPRKSGPTLNETFLGLLYPTENYKVYG 121
                                             P  +    ++ +LGLLYPTE+YKVYG
Sbjct: 64  ----------------------------------PGSNKKLPSDMYLGLLYPTEDYKVYG 123

Query: 122 YLTNTKVKFIMVTTDL-DVRDADVRNIIVYEDETFQAIVSIKTLFFRRFHAAYVDAVSNP 181
           YLTNTK+KFI+V  D  D++D+D++                  LFF+R    +++  SNP
Sbjct: 124 YLTNTKIKFIIVVLDTSDIKDSDLK------------------LFFKRLQTLFINTTSNP 139

Query: 182 FHVPGKKITSKTFAESVSTIVKS 201
           F+ P  K+ SK F + V+ +V S
Sbjct: 184 FYKPNSKVESKKFLQEVTNLVPS 139

[Close]

BLAST of Spg014831 vs. ExPASy Swiss-Prot
Match: B2RYU6 (Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus OX=10116 GN=Trappc2l PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.0e-21
Identity = 67/200 (33.50%), Postives = 103/200 (51.50%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERGIILACLGVLLLVIRSR 60
           M VC+AV+  +N PLYI+S T  ++ LK H++VH SLDVVDE+   ++ +G  L+  R  
Sbjct: 1   MAVCIAVIAKENYPLYIRS-TPTENELKFHYMVHTSLDVVDEK---ISAMGKALVDQR-- 60

Query: 61  FRDDFQTLTIFVSCGLQFFLLILLVLLLLVNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120
                                                    E +LGLLYPTE+YKVYGY+
Sbjct: 61  -----------------------------------------ELYLGLLYPTEDYKVYGYV 120

Query: 121 TNTKVKFIMV--TTDLDVRDADVRNIIVYEDETFQAIVSIKTLFFRRFHAAYVDAVSNPF 180
           TN+KVKF+MV  +++  +RD ++R++                  FR+ H +Y D + NPF
Sbjct: 121 TNSKVKFVMVVDSSNTALRDNEIRSM------------------FRKLHNSYTDVMCNPF 135

Query: 181 HVPGKKITSKTFAESVSTIV 199
           + PG +I S+ F   V++++
Sbjct: 181 YNPGDRIQSRAFDTMVTSMM 135

[Close]

BLAST of Spg014831 vs. ExPASy Swiss-Prot
Match: Q9JME7 (Trafficking protein particle complex subunit 2-like protein OS=Mus musculus OX=10090 GN=Trappc2l PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.0e-20
Identity = 67/200 (33.50%), Postives = 102/200 (51.00%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERGIILACLGVLLLVIRSR 60
           M VC+AV+  +N PLYI+S T  +  LK H++VH SLDVVDE+   ++ +G  L+  R  
Sbjct: 1   MAVCIAVIAKENYPLYIRS-TPTESELKFHYMVHTSLDVVDEK---ISAMGKALVDQR-- 60

Query: 61  FRDDFQTLTIFVSCGLQFFLLILLVLLLLVNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120
                                                    E +LGLLYPTE+YKVYGY+
Sbjct: 61  -----------------------------------------ELYLGLLYPTEDYKVYGYV 120

Query: 121 TNTKVKFIMV--TTDLDVRDADVRNIIVYEDETFQAIVSIKTLFFRRFHAAYVDAVSNPF 180
           TN+KVKF+MV  +++  +RD ++R++                  FR+ H +Y D + NPF
Sbjct: 121 TNSKVKFVMVVDSSNTALRDNEIRSM------------------FRKLHNSYTDVMCNPF 135

Query: 181 HVPGKKITSKTFAESVSTIV 199
           + PG +I S+ F   V++++
Sbjct: 181 YNPGDRIQSRAFDTMVTSMM 135

[Close]

BLAST of Spg014831 vs. ExPASy Swiss-Prot
Match: Q5M8X5 (Trafficking protein particle complex subunit 2-like protein OS=Xenopus tropicalis OX=8364 GN=trappc2l PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.0e-20
Identity = 67/200 (33.50%), Postives = 102/200 (51.00%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERGIILACLGVLLLVIRSR 60
           M VCVAV+  +N PLYI+S T  ++ LK H+ VH SLDVVDE+   ++ +G  ++  R  
Sbjct: 1   MAVCVAVIAKENYPLYIRS-TPTENQLKFHYTVHTSLDVVDEK---ISAMGKAVMDQR-- 60

Query: 61  FRDDFQTLTIFVSCGLQFFLLILLVLLLLVNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120
                                                    E +LGLLYPTE+YKVYGY+
Sbjct: 61  -----------------------------------------ELYLGLLYPTEDYKVYGYV 120

Query: 121 TNTKVKFIMV--TTDLDVRDADVRNIIVYEDETFQAIVSIKTLFFRRFHAAYVDAVSNPF 180
           TN+KVKF+MV  +++  +RD ++R++                  FR+ H +Y D + NPF
Sbjct: 121 TNSKVKFVMVVDSSNTSLRDNEIRSM------------------FRKLHNSYTDVMCNPF 135

Query: 181 HVPGKKITSKTFAESVSTIV 199
           + PG  I S+ F  +V++++
Sbjct: 181 YNPGDPIQSRAFDNTVTSMM 135

[Close]

BLAST of Spg014831 vs. ExPASy Swiss-Prot
Match: A6H7F7 (Trafficking protein particle complex subunit 2-like protein OS=Bos taurus OX=9913 GN=TRAPPC2L PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.0e-20
Identity = 67/200 (33.50%), Postives = 102/200 (51.00%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERGIILACLGVLLLVIRSR 60
           M VCVAV+  +N PLYI+S    ++ LK H++VH SLDVVDE+   ++ +G  L+  R  
Sbjct: 1   MAVCVAVIAKENYPLYIRSI-PTENELKFHYMVHTSLDVVDEK---ISAMGKALVDQR-- 60

Query: 61  FRDDFQTLTIFVSCGLQFFLLILLVLLLLVNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120
                                                    E +LGLLYPTE+YKVYGY+
Sbjct: 61  -----------------------------------------ELYLGLLYPTEDYKVYGYV 120

Query: 121 TNTKVKFIMV--TTDLDVRDADVRNIIVYEDETFQAIVSIKTLFFRRFHAAYVDAVSNPF 180
           TN+KVKF+MV  +++  +RD ++R++                  FR+ H +Y D + NPF
Sbjct: 121 TNSKVKFVMVVDSSNTALRDNEIRSM------------------FRKLHNSYTDVMCNPF 135

Query: 181 HVPGKKITSKTFAESVSTIV 199
           + PG +I S+ F   V++++
Sbjct: 181 YNPGDRIQSRAFDGMVTSMM 135

[Close]

BLAST of Spg014831 vs. ExPASy TrEMBL
Match: A0A6J1JPT4 (Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111486394 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 9.3e-65
Identity = 142/207 (68.60%), Postives = 143/207 (69.08%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERGIILACLGVLLLVIRSR 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDER                 
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDER----------------- 60

Query: 61  FRDDFQTLTIFVSCGLQFFLLILLVLLLLVNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120
                                        VNNPRKSGPTLNETFLGLLYPTENYKVYGYL
Sbjct: 61  -----------------------------VNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120

Query: 121 TNTKVKFIMVTTDLDVRDADVRNIIVYEDETFQAIVSIKTLFFRRFHAAYVDAVSNPFHV 180
           TNTKVKFIMVTTDLDVRDADVRN                  FFRRFHAAYVDAVSNPFHV
Sbjct: 121 TNTKVKFIMVTTDLDVRDADVRN------------------FFRRFHAAYVDAVSNPFHV 143

Query: 181 PGKKITSKTFAESVSTIVKSFGFSSAV 208
           PGKKITSKTFAESVSTIVKSFGFSSA+
Sbjct: 181 PGKKITSKTFAESVSTIVKSFGFSSAI 143

[Close]

BLAST of Spg014831 vs. ExPASy TrEMBL
Match: A0A6J1ERA2 (Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111435157 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 9.3e-65
Identity = 142/207 (68.60%), Postives = 143/207 (69.08%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERGIILACLGVLLLVIRSR 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDER                 
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDER----------------- 60

Query: 61  FRDDFQTLTIFVSCGLQFFLLILLVLLLLVNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120
                                        VNNPRKSGPTLNETFLGLLYPTENYKVYGYL
Sbjct: 61  -----------------------------VNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120

Query: 121 TNTKVKFIMVTTDLDVRDADVRNIIVYEDETFQAIVSIKTLFFRRFHAAYVDAVSNPFHV 180
           TNTKVKFIMVTTDLDVRDADVRN                  FFRRFHAAYVDAVSNPFHV
Sbjct: 121 TNTKVKFIMVTTDLDVRDADVRN------------------FFRRFHAAYVDAVSNPFHV 143

Query: 181 PGKKITSKTFAESVSTIVKSFGFSSAV 208
           PGKKITSKTFAESVSTIVKSFGFSSA+
Sbjct: 181 PGKKITSKTFAESVSTIVKSFGFSSAI 143

[Close]

BLAST of Spg014831 vs. ExPASy TrEMBL
Match: A0A0A0K4Q0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014480 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 3.5e-64
Identity = 141/207 (68.12%), Postives = 143/207 (69.08%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERGIILACLGVLLLVIRSR 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDER                 
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDER----------------- 60

Query: 61  FRDDFQTLTIFVSCGLQFFLLILLVLLLLVNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120
                                        VNNPRKSGPTLNETFLGLLYPTENYKVYGYL
Sbjct: 61  -----------------------------VNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120

Query: 121 TNTKVKFIMVTTDLDVRDADVRNIIVYEDETFQAIVSIKTLFFRRFHAAYVDAVSNPFHV 180
           TNTKVKFIMVTTDLDVRDADVR+                  FFRRFHAAYVDAVSNPFHV
Sbjct: 121 TNTKVKFIMVTTDLDVRDADVRS------------------FFRRFHAAYVDAVSNPFHV 143

Query: 181 PGKKITSKTFAESVSTIVKSFGFSSAV 208
           PGKKITSKTFAESVSTIVKSFGFSSA+
Sbjct: 181 PGKKITSKTFAESVSTIVKSFGFSSAI 143

[Close]

BLAST of Spg014831 vs. ExPASy TrEMBL
Match: A0A1S3BJH9 (trafficking protein particle complex subunit 2-like protein OS=Cucumis melo OX=3656 GN=LOC103490277 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 3.5e-64
Identity = 141/207 (68.12%), Postives = 143/207 (69.08%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERGIILACLGVLLLVIRSR 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDER                 
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDER----------------- 60

Query: 61  FRDDFQTLTIFVSCGLQFFLLILLVLLLLVNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120
                                        VNNPRKSGPTLNETFLGLLYPTENYKVYGYL
Sbjct: 61  -----------------------------VNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120

Query: 121 TNTKVKFIMVTTDLDVRDADVRNIIVYEDETFQAIVSIKTLFFRRFHAAYVDAVSNPFHV 180
           TNTKVKFIMVTTDLDVRDADVR+                  FFRRFHAAYVDAVSNPFHV
Sbjct: 121 TNTKVKFIMVTTDLDVRDADVRS------------------FFRRFHAAYVDAVSNPFHV 143

Query: 181 PGKKITSKTFAESVSTIVKSFGFSSAV 208
           PGKKITSKTFAESVSTIVKSFGFSSA+
Sbjct: 181 PGKKITSKTFAESVSTIVKSFGFSSAI 143

[Close]

BLAST of Spg014831 vs. ExPASy TrEMBL
Match: A0A6J1C584 (trafficking protein particle complex subunit 2-like protein OS=Momordica charantia OX=3673 GN=LOC111008034 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 3.0e-63
Identity = 139/207 (67.15%), Postives = 143/207 (69.08%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERGIILACLGVLLLVIRSR 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDV++ER                 
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEER----------------- 60

Query: 61  FRDDFQTLTIFVSCGLQFFLLILLVLLLLVNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120
                                        VNNPRKSGPTLNETFLGLLYPTENYKVYGYL
Sbjct: 61  -----------------------------VNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120

Query: 121 TNTKVKFIMVTTDLDVRDADVRNIIVYEDETFQAIVSIKTLFFRRFHAAYVDAVSNPFHV 180
           TNTKVKFI+VTTDLDVRDADVR+                  FFRRFHAAYVDAVSNPFHV
Sbjct: 121 TNTKVKFIVVTTDLDVRDADVRS------------------FFRRFHAAYVDAVSNPFHV 143

Query: 181 PGKKITSKTFAESVSTIVKSFGFSSAV 208
           PGKKITSKTFAESVSTIVKSFGFSSAV
Sbjct: 181 PGKKITSKTFAESVSTIVKSFGFSSAV 143

[Close]

BLAST of Spg014831 vs. TAIR 10
Match: AT2G20930.1 (SNARE-like superfamily protein )

HSP 1 Score: 222.6 bits (566), Expect = 2.9e-58
Identity = 121/204 (59.31%), Postives = 133/204 (65.20%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERGIILACLGVLLLVIRSR 60
           MIVCVAVVGHQNNPLYIQSFT+ADDALKLHHIVHCSLDV++ER                 
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTDADDALKLHHIVHCSLDVIEER----------------- 60

Query: 61  FRDDFQTLTIFVSCGLQFFLLILLVLLLLVNNPRKSGPTLNETFLGLLYPTENYKVYGYL 120
                                        VNNP+KSG TLNE FLGLLYPT NYKVYGYL
Sbjct: 61  -----------------------------VNNPKKSGTTLNEAFLGLLYPTVNYKVYGYL 120

Query: 121 TNTKVKFIMVTTDLDVRDADVRNIIVYEDETFQAIVSIKTLFFRRFHAAYVDAVSNPFHV 180
           TNTKVKFI+VTTDLDVRD DVR+                  FFR+FHAAYVDAVSNPFHV
Sbjct: 121 TNTKVKFILVTTDLDVRDTDVRS------------------FFRKFHAAYVDAVSNPFHV 140

Query: 181 PGKKITSKTFAESVSTIVKSFGFS 205
           PGKKITS+TFA++VS IV S+G +
Sbjct: 181 PGKKITSRTFAQTVSNIVGSYGLN 140

The following BLAST results are available for this feature:

BLAST of Spg014831 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928280.1	1.9e-64	68.60	trafficking protein particle complex subunit 2-like protein [Cucurbita moschata]...	[more]
KAG6589019.1	1.9e-64	68.60	Transcription factor ABORTED MICROSPORES, partial [Cucurbita argyrosperma subsp....	[more]
XP_004144858.1	7.3e-64	68.12	trafficking protein particle complex subunit 2-like protein [Cucumis sativus] >X...	[more]
XP_022136317.1	6.2e-63	67.15	trafficking protein particle complex subunit 2-like protein [Momordica charantia...	[more]
XP_031127945.1	2.4e-62	66.99	trafficking protein particle complex subunit 2-like protein [Ipomoea triloba]	[more]

BLAST of Spg014831 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54CU7	1.4e-25	33.99	Trafficking protein particle complex subunit 2-like protein OS=Dictyostelium dis...	[more]
B2RYU6	8.0e-21	33.50	Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus...	[more]
Q9JME7	1.0e-20	33.50	Trafficking protein particle complex subunit 2-like protein OS=Mus musculus OX=1...	[more]
Q5M8X5	1.0e-20	33.50	Trafficking protein particle complex subunit 2-like protein OS=Xenopus tropicali...	[more]
A6H7F7	3.0e-20	33.50	Trafficking protein particle complex subunit 2-like protein OS=Bos taurus OX=991...	[more]

BLAST of Spg014831 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JPT4	9.3e-65	68.60	Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1ERA2	9.3e-65	68.60	Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A0A0K4Q0	3.5e-64	68.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014480 PE=4 SV=1	[more]
A0A1S3BJH9	3.5e-64	68.12	trafficking protein particle complex subunit 2-like protein OS=Cucumis melo OX=3...	[more]
A0A6J1C584	3.0e-63	67.15	trafficking protein particle complex subunit 2-like protein OS=Momordica charant...	[more]

BLAST of Spg014831 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20930.1	2.9e-58	59.31	SNARE-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.450.70		coord: 1..204 e-value: 1.5E-36 score: 127.0
None	No IPR available	PANTHER	PTHR12403:SF26	BNAA06G40850D PROTEIN	coord: 1..49
None	No IPR available	PANTHER	PTHR12403:SF26	BNAA06G40850D PROTEIN	coord: 92..202
IPR006722	Trafficking protein particle complex subunit 2	PFAM	PF04628	Sedlin_N	coord: 7..199 e-value: 8.6E-27 score: 93.8
IPR006722	Trafficking protein particle complex subunit 2	PANTHER	PTHR12403	TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2	coord: 1..49 coord: 92..202
IPR044760	Trafficking protein particle complex subunit 2-like	CDD	cd14854	TRAPPC2L	coord: 3..198 e-value: 1.47775E-55 score: 171.234
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 2..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg014831.1	Spg014831.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030008	TRAPP complex