Spg014805 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg014805
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold3: 28639058 .. 28640394 (+)
RNA-Seq Expression	Spg014805
Synteny	Spg014805

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAACGAGGGGACAAAAGGAAAGGGATGCTGAGGAAGAAGAGGTGCAGGTTACACCTGAAGCACCGAAAACTAAGGCGAAGAAGAAAAAGACGCCGGAGGAAAAAGAAGCTAAGAGAAGAAGACGACAACAGAGGACTGAAGTGGAAGAGGTAGTGCAAAAAGTAGTGGAGGGTATTGCTGCCGAAGTGGTTGAGGAGGAAAATCCGAAGGATCCAGAGGAACAGATTCCTGGACAGAATGATCCGATAGTCGAGAATCCACAAGAAGTTCAAGAAAAACAAGCAGAGGATGTGCAAGAAAGAGGAAATGAGCAAGAGGTTCAAGAGCAAGAAGCTCAAGTCGAAGTTATTATGCCGGAGGATCCCCGTCGTCGCCGTCGAAAGCAGAAAGCCGACCGCGTCAAGGTAATCCGAACAAATACTCCTTCGCCACCGACACTGATTCTGAGAAAAAGGATGCAGAAAAAGAAGAACAGGAGAAAAAGGAGTCAGAGGACCAAGCGAGAGAAGAAATAGAAAAGAAAGCAGATGAGGAAATTTTGTCCAAGCAGAGGGAAAACAAGGGCAAAGGTATTGCTGAGGCACCGGCTGAAGCTGAGGATATTGATACTGAGGAAACATGGTTGCCGTACAATCGTTTCATCAATAATCTTGCCCGAGCAAAGTACATAGAAATGTTGAAGCGAGACCTTTTGTTTGAGTGAGGATTTGGTGATGACCTGCCACGTTTTTTGAGGACTGGAATAACAAATCATGGGTGGAGTCAGTTCTGTGCAAAGCCGGAGCTGGTCAATTTGAATATTGTCCGCGAATTTTATGCAAATATAGATGATCAAGAAGGATTTCAGGTTATAGTTCGAGGGGTGCCCGTTGACTAGAGCCCAGGAGCAATCAATTCTCTTTTTAACCTCCAAGACTTTCTGCACGCGGGATTCAATGAGATGGTGGTAGCACCATCTAATGATCAGTTAAATGCGGTTGTCAGGGAGGTTGGCATTGAAGGATTGGAATTTCGTAATTCCGTAAAGCGGAAGCGTGATTGGGACCGATTCGTAATTAATTTTGTTTAATCTAAAATACCAATACATTGGCAATAATATTAGAACTATTCTAAATATATATTAAGGCTAAGCATACAAAAATATTAGATCTAAATCTAATTTATAAAGTAACAAATTACTTACTCTCGTTGACGACTCAGATTAAATTCACCAATTGCTTGTGAATTAATCACGAACTAGTGCGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGGAAGCAGGAGACTTGTGGGAACCTTTGGGAGAATTCTCTAA

mRNA sequence

ATGGCGAAAACGAGGGGACAAAAGGAAAGGGATGCTGAGGAAGAAGAGGTGCAGGTTACACCTGAAGCACCGAAAACTAAGGCGAAGAAGAAAAAGACGCCGGAGGAAAAAGAAGCTAAGAGAAGAAGACGACAACAGAGGACTGAAGTGGAAGAGGTAGTGCAAAAAGTAGTGGAGGGTATTGCTGCCGAAGTGGTTGAGGAGGAAAATCCGAAGGATCCAGAGGAACAGATTCCTGGACAGAATGATCCGATAGTCGAGAATCCACAAGAAGTTCAAGAAAAACAAGCAGAGGATGTGCAAGAAAGAGGAAATGAGCAAGAGGTTCAAGAGCAAGAAGCTCAAGTCGAAGTTATTATGCCGGAGGATCCCCGTCGTCGCCGTCGAAAGCAGAAAGCCGACCGCGTCAAGGAGAAAAAGGAGTCAGAGGACCAAGCGAGAGAAGAAATAGAAAAGAAAGCAGATGAGGAAATTTTGTCCAAGCAGAGGGAAAACAAGGGCAAAGGTATTGCTGAGGCACCGGCTGAAGCTGAGGATATTGATACTGAGGAAACATGGTTGCCGTACAATCGTTTCATCAATAATCTTGCCCGAGCAAAGACTGGAATAACAAATCATGGGTGGAGTCAGTTCTGTGCAAAGCCGGAGCTGGTCAATTTGAATATTGTCCGCGAATTTTATGCAAATATAGATGATCAAGAAGGATTTCAGTTAAATGCGGTTGTCAGGGAGGTTGGCATTGAAGGATTGGAATTTCGTAATTCCGTAAAGCGGAAGCGTGATTGGGACCGATTCTGCGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGGAAGCAGGAGACTTGTGGGAACCTTTGGGAGAATTCTCTAA

Coding sequence (CDS)

ATGGCGAAAACGAGGGGACAAAAGGAAAGGGATGCTGAGGAAGAAGAGGTGCAGGTTACACCTGAAGCACCGAAAACTAAGGCGAAGAAGAAAAAGACGCCGGAGGAAAAAGAAGCTAAGAGAAGAAGACGACAACAGAGGACTGAAGTGGAAGAGGTAGTGCAAAAAGTAGTGGAGGGTATTGCTGCCGAAGTGGTTGAGGAGGAAAATCCGAAGGATCCAGAGGAACAGATTCCTGGACAGAATGATCCGATAGTCGAGAATCCACAAGAAGTTCAAGAAAAACAAGCAGAGGATGTGCAAGAAAGAGGAAATGAGCAAGAGGTTCAAGAGCAAGAAGCTCAAGTCGAAGTTATTATGCCGGAGGATCCCCGTCGTCGCCGTCGAAAGCAGAAAGCCGACCGCGTCAAGGAGAAAAAGGAGTCAGAGGACCAAGCGAGAGAAGAAATAGAAAAGAAAGCAGATGAGGAAATTTTGTCCAAGCAGAGGGAAAACAAGGGCAAAGGTATTGCTGAGGCACCGGCTGAAGCTGAGGATATTGATACTGAGGAAACATGGTTGCCGTACAATCGTTTCATCAATAATCTTGCCCGAGCAAAGACTGGAATAACAAATCATGGGTGGAGTCAGTTCTGTGCAAAGCCGGAGCTGGTCAATTTGAATATTGTCCGCGAATTTTATGCAAATATAGATGATCAAGAAGGATTTCAGTTAAATGCGGTTGTCAGGGAGGTTGGCATTGAAGGATTGGAATTTCGTAATTCCGTAAAGCGGAAGCGTGATTGGGACCGATTCTGCGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGGAAGCAGGAGACTTGTGGGAACCTTTGGGAGAATTCTCTAA

Protein sequence

MAKTRGQKERDAEEEEVQVTPEAPKTKAKKKKTPEEKEAKRRRRQQRTEVEEVVQKVVEGIAAEVVEEENPKDPEEQIPGQNDPIVENPQEVQEKQAEDVQERGNEQEVQEQEAQVEVIMPEDPRRRRRKQKADRVKEKKESEDQAREEIEKKADEEILSKQRENKGKGIAEAPAEAEDIDTEETWLPYNRFINNLARAKTGITNHGWSQFCAKPELVNLNIVREFYANIDDQEGFQLNAVVREVGIEGLEFRNSVKRKRDWDRFCEHHHYGYTGMTLRLLGSRRLVGTFGRIL

Homology

The following BLAST results are available for this feature:

BLAST of Spg014805 vs.


Match Name	E-value	Identity	Description

BLAST of Spg014805 vs.


Match Name	E-value	Identity	Description

BLAST of Spg014805 vs.


Match Name	E-value	Identity	Description

BLAST of Spg014805 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 36..56
None	No IPR available	COILS	Coil	Coil	coord: 129..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg014805.1	Spg014805.1	mRNA