Spg014627 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg014627
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF761 domain-containing protein
Locationscaffold3: 47527670 .. 47527921 (-)
RNA-Seq ExpressionSpg014627
SyntenySpg014627
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGAGCTCTGAAGCAGCTTATTTTGCCGGCGGTGATAACAAGCAGCAGCCACCGCCATCGCCGCCGTCGCCTCGCCGGAGCTGCGGCGGGGAGAGGAGGAAATTGGAGAGGACGAGGACGGTGACGGTGACGGAGGATGTTAATGAAAGTGCTGAAGCTTTCATTAAGAAGTTCAGAAATCAACTCTTGATTCAGAGGCTTCAGTCCATTGAGAATTATGAGAAAATGTTGGCTGGAGATACTTAA

mRNA sequence

ATGAAGAAGAGCTCTGAAGCAGCTTATTTTGCCGGCGGTGATAACAAGCAGCAGCCACCGCCATCGCCGCCGTCGCCTCGCCGGAGCTGCGGCGGGGAGAGGAGGAAATTGGAGAGGACGAGGACGGTGACGGTGACGGAGGATGTTAATGAAAGTGCTGAAGCTTTCATTAAGAAGTTCAGAAATCAACTCTTGATTCAGAGGCTTCAGTCCATTGAGAATTATGAGAAAATGTTGGCTGGAGATACTTAA

Coding sequence (CDS)

ATGAAGAAGAGCTCTGAAGCAGCTTATTTTGCCGGCGGTGATAACAAGCAGCAGCCACCGCCATCGCCGCCGTCGCCTCGCCGGAGCTGCGGCGGGGAGAGGAGGAAATTGGAGAGGACGAGGACGGTGACGGTGACGGAGGATGTTAATGAAAGTGCTGAAGCTTTCATTAAGAAGTTCAGAAATCAACTCTTGATTCAGAGGCTTCAGTCCATTGAGAATTATGAGAAAATGTTGGCTGGAGATACTTAA

Protein sequence

MKKSSEAAYFAGGDNKQQPPPSPPSPRRSCGGERRKLERTRTVTVTEDVNESAEAFIKKFRNQLLIQRLQSIENYEKMLAGDT
Homology
BLAST of Spg014627 vs. NCBI nr
Match: KAA0058765.1 (DUF761 domain-containing protein [Cucumis melo var. makuwa] >TYK10559.1 DUF761 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 126.3 bits (316), Expect = 1.2e-25
Identity = 69/86 (80.23%), Postives = 74/86 (86.05%), Query Frame = 0

Query: 1  MKKSSE---AAYFAGGDNKQQPPPSPPSPRRSCGGERRKLERTRTVTVTEDVNESAEAFI 60
          MKKSSE    +  AGG NK QPPPSP SP R CGGERRKLERT TVTVTEDV+ESAEAFI
Sbjct: 1  MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI 60

Query: 61 KKFRNQLLIQRLQSIENYEKMLAGDT 84
          KKFRNQLLIQRLQSIENYE++LAG+T
Sbjct: 61 KKFRNQLLIQRLQSIENYERILAGET 86

BLAST of Spg014627 vs. NCBI nr
Match: KGN45285.1 (hypothetical protein Csa_016012 [Cucumis sativus])

HSP 1 Score: 120.2 bits (300), Expect = 8.6e-24
Identity = 68/85 (80.00%), Postives = 72/85 (84.71%), Query Frame = 0

Query: 1   MKKSSE--AAYFAGGDNKQQPPPSPPSPRRSCGGERRKLERTRTVTVTEDVNESAEAFIK 60
           MKK+SE  A   AGG NK QPPP P SP R CGGERRKLE  RTVTVTEDVNESAEAFI+
Sbjct: 19  MKKNSELPAVSAAGGINKLQPPPCPSSPLRFCGGERRKLE--RTVTVTEDVNESAEAFIQ 78

Query: 61  KFRNQLLIQRLQSIENYEKMLAGDT 84
           KFRNQLLIQRLQSIENYEK+LAG+T
Sbjct: 79  KFRNQLLIQRLQSIENYEKILAGET 101

BLAST of Spg014627 vs. NCBI nr
Match: KAG6575588.1 (hypothetical protein SDJN03_26227, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014129.1 hypothetical protein SDJN02_24302, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 93.2 bits (230), Expect = 1.1e-15
Identity = 58/89 (65.17%), Postives = 65/89 (73.03%), Query Frame = 0

Query: 1  MKKSSE----AAYFAGGDNKQQPPPSPPSPRRSCGGERRKLERTRTVT--VTEDVNESAE 60
          MK +S+    AA  A G  KQQ PP PP        ER K+E+T TVT  VTEDVNESAE
Sbjct: 1  MKNTSQPPFSAAAAAAGSCKQQQPPPPPRQ------ERTKMEKTPTVTVSVTEDVNESAE 60

Query: 61 AFIKKFRNQLLIQRLQSIENYEKMLAGDT 84
          AFIK+FRNQLLIQRLQSIENYEK+LAG+T
Sbjct: 61 AFIKRFRNQLLIQRLQSIENYEKILAGET 83

BLAST of Spg014627 vs. NCBI nr
Match: KAB2611398.1 (hypothetical protein D8674_019430 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 65.1 bits (157), Expect = 3.3e-07
Identity = 41/80 (51.25%), Postives = 51/80 (63.75%), Query Frame = 0

Query: 2  KKSSEAAYFAGGDNKQQPPPSPPSPRRSCGGERRKLERTRTVTVTEDVNESAEAFIKKFR 61
          +K+  +   A  +NK++  P             +KLER      TED+NESAEAFIKKFR
Sbjct: 31 QKTGASRSHAMANNKEETAP-------------KKLERKS----TEDINESAEAFIKKFR 90

Query: 62 NQLLIQRLQSIENYEKMLAG 82
           QLLIQRL+SIENYE+MLAG
Sbjct: 91 KQLLIQRLESIENYEQMLAG 93

BLAST of Spg014627 vs. NCBI nr
Match: XP_028953155.1 (uncharacterized protein LOC114822603 [Malus domestica])

HSP 1 Score: 64.7 bits (156), Expect = 4.3e-07
Identity = 35/46 (76.09%), Postives = 39/46 (84.78%), Query Frame = 0

Query: 35 RKLERTRTVTVTEDVNESAEAFIKKFRNQLLIQRLQSIENYEKMLA 81
          +KLER      TED+NESAEAFIKKFR QLLIQRL+SIENYE+MLA
Sbjct: 51 KKLERKS----TEDINESAEAFIKKFRKQLLIQRLESIENYEQMLA 92

BLAST of Spg014627 vs. ExPASy TrEMBL
Match: A0A5D3CK25 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002120 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.8e-26
Identity = 69/86 (80.23%), Postives = 74/86 (86.05%), Query Frame = 0

Query: 1  MKKSSE---AAYFAGGDNKQQPPPSPPSPRRSCGGERRKLERTRTVTVTEDVNESAEAFI 60
          MKKSSE    +  AGG NK QPPPSP SP R CGGERRKLERT TVTVTEDV+ESAEAFI
Sbjct: 1  MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI 60

Query: 61 KKFRNQLLIQRLQSIENYEKMLAGDT 84
          KKFRNQLLIQRLQSIENYE++LAG+T
Sbjct: 61 KKFRNQLLIQRLQSIENYERILAGET 86

BLAST of Spg014627 vs. ExPASy TrEMBL
Match: A0A0A0K6D1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433160 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.2e-24
Identity = 68/85 (80.00%), Postives = 72/85 (84.71%), Query Frame = 0

Query: 1   MKKSSE--AAYFAGGDNKQQPPPSPPSPRRSCGGERRKLERTRTVTVTEDVNESAEAFIK 60
           MKK+SE  A   AGG NK QPPP P SP R CGGERRKLE  RTVTVTEDVNESAEAFI+
Sbjct: 19  MKKNSELPAVSAAGGINKLQPPPCPSSPLRFCGGERRKLE--RTVTVTEDVNESAEAFIQ 78

Query: 61  KFRNQLLIQRLQSIENYEKMLAGDT 84
           KFRNQLLIQRLQSIENYEK+LAG+T
Sbjct: 79  KFRNQLLIQRLQSIENYEKILAGET 101

BLAST of Spg014627 vs. ExPASy TrEMBL
Match: A0A5N5G7Z8 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_019430 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.6e-07
Identity = 41/80 (51.25%), Postives = 51/80 (63.75%), Query Frame = 0

Query: 2  KKSSEAAYFAGGDNKQQPPPSPPSPRRSCGGERRKLERTRTVTVTEDVNESAEAFIKKFR 61
          +K+  +   A  +NK++  P             +KLER      TED+NESAEAFIKKFR
Sbjct: 31 QKTGASRSHAMANNKEETAP-------------KKLERKS----TEDINESAEAFIKKFR 90

Query: 62 NQLLIQRLQSIENYEKMLAG 82
           QLLIQRL+SIENYE+MLAG
Sbjct: 91 KQLLIQRLESIENYEQMLAG 93

BLAST of Spg014627 vs. ExPASy TrEMBL
Match: M5WWR7 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G082000 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.7e-07
Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 0

Query: 34 RRKLERTRTVTVTEDVNESAEAFIKKFRNQLLIQRLQSIENYEKMLA 81
          + KLER      TED+NESAEAFIKKFR QLLIQRL+SIENYE+MLA
Sbjct: 49 KNKLERKS----TEDINESAEAFIKKFRKQLLIQRLESIENYEQMLA 91

BLAST of Spg014627 vs. ExPASy TrEMBL
Match: A0A314V316 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_33869 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.7e-07
Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 0

Query: 34 RRKLERTRTVTVTEDVNESAEAFIKKFRNQLLIQRLQSIENYEKMLA 81
          + KLER      TED+NESAEAFIKKFR QLLIQRL+SIENYE+MLA
Sbjct: 48 KNKLERKS----TEDINESAEAFIKKFRKQLLIQRLESIENYEQMLA 90

BLAST of Spg014627 vs. TAIR 10
Match: AT1G15385.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); Has 6 Blast hits to 6 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 8.7e-06
Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 0

Query: 35 RKLERTRTVTVTEDVNESAEAFIKKFRNQLLIQRLQSIEN 75
          +K+ER  ++    DV++SAEAFI KFRNQLL+QRL+SIEN
Sbjct: 32 KKVERKASM----DVDKSAEAFITKFRNQLLLQRLESIEN 67

BLAST of Spg014627 vs. TAIR 10
Match: AT5G54300.1 (Protein of unknown function (DUF761) )

HSP 1 Score: 41.2 bits (95), Expect = 4.8e-04
Identity = 17/37 (45.95%), Postives = 26/37 (70.27%), Query Frame = 0

Query: 47  EDVNESAEAFIKKFRNQLLIQRLQSIENYEKMLAGDT 84
           E++N   EAFIKKF  ++ +QRL+S+  Y +M+ G T
Sbjct: 288 EELNRRVEAFIKKFNEEMRLQRLESLAKYNEMVNGGT 324

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0058765.11.2e-2580.23DUF761 domain-containing protein [Cucumis melo var. makuwa] >TYK10559.1 DUF761 d... [more]
KGN45285.18.6e-2480.00hypothetical protein Csa_016012 [Cucumis sativus][more]
KAG6575588.11.1e-1565.17hypothetical protein SDJN03_26227, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAB2611398.13.3e-0751.25hypothetical protein D8674_019430 [Pyrus ussuriensis x Pyrus communis][more]
XP_028953155.14.3e-0776.09uncharacterized protein LOC114822603 [Malus domestica][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CK255.8e-2680.23DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A0A0K6D14.2e-2480.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433160 PE=4 SV=1[more]
A0A5N5G7Z81.6e-0751.25Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867... [more]
M5WWR72.7e-0774.47Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G082000 PE=4 SV=1[more]
A0A314V3162.7e-0774.47Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_338... [more]
Match NameE-valueIdentityDescription
AT1G15385.18.7e-0662.50unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761,... [more]
AT5G54300.14.8e-0445.95Protein of unknown function (DUF761) [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 47..80
e-value: 1.6E-15
score: 56.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..43
NoneNo IPR availablePANTHERPTHR33098COTTON FIBER (DUF761)coord: 6..82
NoneNo IPR availablePANTHERPTHR33098:SF82DUF761 DOMAIN PROTEINcoord: 6..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg014627.1Spg014627.1mRNA