Spg014606 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg014606
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold3: 44768024 .. 44768389 (+)
RNA-Seq Expression	Spg014606
Synteny	Spg014606

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTCGGACCAGGAAAAATCAAGCTCCGACCTCAAGCGACCAGACACACCAACCAACAAGAAGCACGTCGAGAACGACGGTGTATCAAGGTTGGTCACATGGGGTGGAGCCTTCGCTTTCGCTTGTTTACTTGTAGCTTCTACATTCAAGAGGAGCAAGAAGATCAAAACTCCTGAAAGGAGTCGAGATGATGTTTCGAATCTCGACGCTGGTGGTTCGAGAGAAAGCATCGGTTGCACTGATGAAGCTCAACAAGTGGAAGGACTGCAACTTCTTCTTCCATCTTCATCAACAACTGATCTCATCAGTCGTTCATGGTTAGAACTGAGTTTCATATTTTTGTTTGTTGTGAAATATGTTTGA

mRNA sequence

ATGCCGTCGGACCAGGAAAAATCAAGCTCCGACCTCAAGCGACCAGACACACCAACCAACAAGAAGCACGTCGAGAACGACGGTGTATCAAGGTTGGTCACATGGGGTGGAGCCTTCGCTTTCGCTTGTTTACTTGTAGCTTCTACATTCAAGAGGAGCAAGAAGATCAAAACTCCTGAAAGGAGTCGAGATGATGTTTCGAATCTCGACGCTGGTGGTTCGAGAGAAAGCATCGGTTGCACTGATGAAGCTCAACAAGTGGAAGGACTGCAACTTCTTCTTCCATCTTCATCAACAACTGATCTCATCAGTCGTTCATGGTTAGAACTGAGTTTCATATTTTTGTTTGTTGTGAAATATGTTTGA

Coding sequence (CDS)

ATGCCGTCGGACCAGGAAAAATCAAGCTCCGACCTCAAGCGACCAGACACACCAACCAACAAGAAGCACGTCGAGAACGACGGTGTATCAAGGTTGGTCACATGGGGTGGAGCCTTCGCTTTCGCTTGTTTACTTGTAGCTTCTACATTCAAGAGGAGCAAGAAGATCAAAACTCCTGAAAGGAGTCGAGATGATGTTTCGAATCTCGACGCTGGTGGTTCGAGAGAAAGCATCGGTTGCACTGATGAAGCTCAACAAGTGGAAGGACTGCAACTTCTTCTTCCATCTTCATCAACAACTGATCTCATCAGTCGTTCATGGTTAGAACTGAGTTTCATATTTTTGTTTGTTGTGAAATATGTTTGA

Protein sequence

MPSDQEKSSSDLKRPDTPTNKKHVENDGVSRLVTWGGAFAFACLLVASTFKRSKKIKTPERSRDDVSNLDAGGSRESIGCTDEAQQVEGLQLLLPSSSTTDLISRSWLELSFIFLFVVKYV

Homology

[Close]

BLAST of Spg014606 vs. NCBI nr
Match: KAA0067974.1 (uncharacterized protein E6C27_scaffold138G001610 [Cucumis melo var. makuwa] >TYK18149.1 uncharacterized protein E5676_scaffold411G00810 [Cucumis melo var. makuwa])

HSP 1 Score: 105.5 bits (262), Expect = 3.2e-19
Identity = 64/110 (58.18%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 1   MPSDQEKSSSDLKRPDTPTNKKH-----VENDGVSRLVTWGGAFAFACLLVASTFKRSKK 60
           MP D EKSS  L+RP+ PTNKK      VEN+GV RLV WGGAF F CLL+ASTFK+SKK
Sbjct: 5   MPPDHEKSSFHLERPNKPTNKKDVELGTVENNGVLRLVMWGGAFVFGCLLIASTFKKSKK 64

Query: 61  IKT-PERSRDDVSNLDAGGSRESIGCTDEAQQVEGLQLLLPSSSTTDLIS 105
           I T P+RSR+  S+LD       +   D+AQ++EGL+LLL  SS+TD+IS
Sbjct: 65  ITTSPKRSREGDSDLD-------VIADDKAQEMEGLRLLL--SSSTDIIS 105

[Close]

BLAST of Spg014606 vs. NCBI nr
Match: XP_008451548.1 (PREDICTED: uncharacterized protein LOC103492795 [Cucumis melo])

HSP 1 Score: 105.1 bits (261), Expect = 4.2e-19
Identity = 63/110 (57.27%), Postives = 80/110 (72.73%), Query Frame = 0


Query: 1   MPSDQEKSSSDLKRPDTPTNKKH-----VENDGVSRLVTWGGAFAFACLLVASTFKRSKK 60
           MP D EKSS  L+RP+ PTNKK+     VEN+GV RLV WGGAF F CLL+ASTFK+SKK
Sbjct: 5   MPPDHEKSSFHLERPNKPTNKKNVELGTVENNGVLRLVMWGGAFVFGCLLIASTFKKSKK 64

Query: 61  IKT-PERSRDDVSNLDAGGSRESIGCTDEAQQVEGLQLLLPSSSTTDLIS 105
           I T P+RSR+  S+LD       +   D+AQ++EGL+L+L  SS+TD+IS
Sbjct: 65  ITTSPKRSREGDSDLD-------VIADDKAQEMEGLRLVL--SSSTDIIS 105

[Close]

BLAST of Spg014606 vs. NCBI nr
Match: XP_031744420.1 (putative uncharacterized protein DDB_G0281733 [Cucumis sativus] >KAE8646347.1 hypothetical protein Csa_016596 [Cucumis sativus])

HSP 1 Score: 99.8 bits (247), Expect = 1.8e-17
Identity = 61/111 (54.95%), Postives = 78/111 (70.27%), Query Frame = 0


Query: 2   PSDQEKSSSDLKRPDTPTNKKH-----VENDGVSRLVTWGGAFAFACLLVASTFKRSKKI 61
           P  + KSS  L+RPD P NKK+     VEN GV RLV WGGAF F CLL+ASTFK+SKK 
Sbjct: 3   PDHKTKSSFHLERPDKPANKKNVELGTVENTGVLRLVMWGGAFVFGCLLIASTFKKSKKS 62

Query: 62  KTPERSRDDVSNLDA-GGSRESI--GCTDEAQQVEGLQLLLPSSSTTDLIS 105
            +P+  R+ VSNLD  GG +ES      D+A+++EGL+L+L  SS+TD+IS
Sbjct: 63  ISPKTCREGVSNLDVIGGFKESSTRDDDDKARKMEGLRLIL--SSSTDIIS 111

[Close]

BLAST of Spg014606 vs. NCBI nr
Match: XP_038899634.1 (uncharacterized G-patch domain protein DDB_G0278987-like [Benincasa hispida])

HSP 1 Score: 99.4 bits (246), Expect = 2.3e-17
Identity = 66/113 (58.41%), Postives = 81/113 (71.68%), Query Frame = 0


Query: 1   MPSDQEKSSSDLKRPDTPTNKKH-----VENDGVSRLVTWGGAFAFAC-LLVASTFKRSK 60
           M SDQEKSS   K P   TNKKH     +ENDGV R+  WGGAFAFAC L++ASTFKRSK
Sbjct: 1   MSSDQEKSSFHPKIP--ATNKKHIITRIIENDGVPRMAAWGGAFAFACSLVLASTFKRSK 60

Query: 61  KIKTPER-SRDDVSNLDAGGSRESIGCTDEAQQVEGLQLLLPSSSTTDLISRS 107
           KI +P+R S+D  S+LD       +G  D+A+++EGLQLLL SSS TD+I+RS
Sbjct: 61  KIISPKRPSQDGDSDLD-------VGDDDKARRMEGLQLLLQSSS-TDIINRS 103

[Close]

BLAST of Spg014606 vs. NCBI nr
Match: XP_022153014.1 (uncharacterized protein LOC111020615 [Momordica charantia])

HSP 1 Score: 84.3 bits (207), Expect = 7.7e-13
Identity = 54/103 (52.43%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 9   SSDLKRPDTPTNKKH------VENDGVSRLVTWGGAFAFACLLVASTFKRSKKIKTPERS 68
           +SD +   T T KK+       +N  V  LV WGGAFAFACLL ASTFKR++KI++ ERS
Sbjct: 2   ASDDETKTTTTTKKNQTQIRIAQNGAVGSLVAWGGAFAFACLLAASTFKRNRKIRSAERS 61

Query: 69  RDDVSNLDAGGSRESIG-CTDEAQQVEGLQLLLPSSSTTDLIS 105
           +DD      GGS +S   C  E  Q+EGL+LLL SSS TD IS
Sbjct: 62  KDD------GGSGQSAARCGGEPPQMEGLRLLLQSSS-TDFIS 97

[Close]

BLAST of Spg014606 vs. ExPASy TrEMBL
Match: A0A5A7VKM4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00810 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.6e-19
Identity = 64/110 (58.18%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 1   MPSDQEKSSSDLKRPDTPTNKKH-----VENDGVSRLVTWGGAFAFACLLVASTFKRSKK 60
           MP D EKSS  L+RP+ PTNKK      VEN+GV RLV WGGAF F CLL+ASTFK+SKK
Sbjct: 5   MPPDHEKSSFHLERPNKPTNKKDVELGTVENNGVLRLVMWGGAFVFGCLLIASTFKKSKK 64

Query: 61  IKT-PERSRDDVSNLDAGGSRESIGCTDEAQQVEGLQLLLPSSSTTDLIS 105
           I T P+RSR+  S+LD       +   D+AQ++EGL+LLL  SS+TD+IS
Sbjct: 65  ITTSPKRSREGDSDLD-------VIADDKAQEMEGLRLLL--SSSTDIIS 105

[Close]

BLAST of Spg014606 vs. ExPASy TrEMBL
Match: A0A1S3BRP4 (uncharacterized protein LOC103492795 OS=Cucumis melo OX=3656 GN=LOC103492795 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.0e-19
Identity = 63/110 (57.27%), Postives = 80/110 (72.73%), Query Frame = 0


Query: 1   MPSDQEKSSSDLKRPDTPTNKKH-----VENDGVSRLVTWGGAFAFACLLVASTFKRSKK 60
           MP D EKSS  L+RP+ PTNKK+     VEN+GV RLV WGGAF F CLL+ASTFK+SKK
Sbjct: 5   MPPDHEKSSFHLERPNKPTNKKNVELGTVENNGVLRLVMWGGAFVFGCLLIASTFKKSKK 64

Query: 61  IKT-PERSRDDVSNLDAGGSRESIGCTDEAQQVEGLQLLLPSSSTTDLIS 105
           I T P+RSR+  S+LD       +   D+AQ++EGL+L+L  SS+TD+IS
Sbjct: 65  ITTSPKRSREGDSDLD-------VIADDKAQEMEGLRLVL--SSSTDIIS 105

[Close]

BLAST of Spg014606 vs. ExPASy TrEMBL
Match: A0A0A0K656 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398200 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 8.5e-18
Identity = 61/111 (54.95%), Postives = 78/111 (70.27%), Query Frame = 0


Query: 2   PSDQEKSSSDLKRPDTPTNKKH-----VENDGVSRLVTWGGAFAFACLLVASTFKRSKKI 61
           P  + KSS  L+RPD P NKK+     VEN GV RLV WGGAF F CLL+ASTFK+SKK 
Sbjct: 3   PDHKTKSSFHLERPDKPANKKNVELGTVENTGVLRLVMWGGAFVFGCLLIASTFKKSKKS 62

Query: 62  KTPERSRDDVSNLDA-GGSRESI--GCTDEAQQVEGLQLLLPSSSTTDLIS 105
            +P+  R+ VSNLD  GG +ES      D+A+++EGL+L+L  SS+TD+IS
Sbjct: 63  ISPKTCREGVSNLDVIGGFKESSTRDDDDKARKMEGLRLIL--SSSTDIIS 111

[Close]

BLAST of Spg014606 vs. ExPASy TrEMBL
Match: A0A6J1DHS3 (uncharacterized protein LOC111020615 OS=Momordica charantia OX=3673 GN=LOC111020615 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.7e-13
Identity = 54/103 (52.43%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 9   SSDLKRPDTPTNKKH------VENDGVSRLVTWGGAFAFACLLVASTFKRSKKIKTPERS 68
           +SD +   T T KK+       +N  V  LV WGGAFAFACLL ASTFKR++KI++ ERS
Sbjct: 2   ASDDETKTTTTTKKNQTQIRIAQNGAVGSLVAWGGAFAFACLLAASTFKRNRKIRSAERS 61

Query: 69  RDDVSNLDAGGSRESIG-CTDEAQQVEGLQLLLPSSSTTDLIS 105
           +DD      GGS +S   C  E  Q+EGL+LLL SSS TD IS
Sbjct: 62  KDD------GGSGQSAARCGGEPPQMEGLRLLLQSSS-TDFIS 97

[Close]

BLAST of Spg014606 vs. ExPASy TrEMBL
Match: A0A6J1JQ73 (uncharacterized protein LOC111487956 OS=Cucurbita maxima OX=3661 GN=LOC111487956 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 5.9e-11
Identity = 52/108 (48.15%), Postives = 60/108 (55.56%), Query Frame = 0


Query: 1   MPSDQEKSSSDLKRPDTPTNKKHVENDGVSRLVTW-GGAFAFACLLVASTFKRSKKIKT- 60
           MP D+EK S              + +D +SR VTW GG F FACLLV STFK SKKI T 
Sbjct: 1   MPFDREKLS--------------LRSDKLSRWVTWGGGVFVFACLLVVSTFKMSKKIITS 60

Query: 61  PERSRDDVSNLDAGGSRESIGCTDEAQQVEGLQLLLPSSSTTDLISRS 107
           P+  RDD SNLD     ES  C DE  + E  +     SS+TDLIS S
Sbjct: 61  PKTGRDDDSNLDVDSFGESTRCVDEETRQEDERQWFRQSSSTDLISHS 94

The following BLAST results are available for this feature:

BLAST of Spg014606 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067974.1	3.2e-19	58.18	uncharacterized protein E6C27_scaffold138G001610 [Cucumis melo var. makuwa] >TYK...	[more]
XP_008451548.1	4.2e-19	57.27	PREDICTED: uncharacterized protein LOC103492795 [Cucumis melo]	[more]
XP_031744420.1	1.8e-17	54.95	putative uncharacterized protein DDB_G0281733 [Cucumis sativus] >KAE8646347.1 hy...	[more]
XP_038899634.1	2.3e-17	58.41	uncharacterized G-patch domain protein DDB_G0278987-like [Benincasa hispida]	[more]
XP_022153014.1	7.7e-13	52.43	uncharacterized protein LOC111020615 [Momordica charantia]	[more]

BLAST of Spg014606 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg014606 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VKM4	1.6e-19	58.18	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BRP4	2.0e-19	57.27	uncharacterized protein LOC103492795 OS=Cucumis melo OX=3656 GN=LOC103492795 PE=...	[more]
A0A0A0K656	8.5e-18	54.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398200 PE=4 SV=1	[more]
A0A6J1DHS3	3.7e-13	52.43	uncharacterized protein LOC111020615 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1JQ73	5.9e-11	48.15	uncharacterized protein LOC111487956 OS=Cucurbita maxima OX=3661 GN=LOC111487956...	[more]

BLAST of Spg014606 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg014606.1	Spg014606.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane