Spg014580 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg014580
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncoiled-coil domain-containing protein 12-like
Locationscaffold3: 33695132 .. 33701652 (-)
RNA-Seq ExpressionSpg014580
SyntenySpg014580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGTGTCTGTGCTTCCTAGTCTGTGAGAGTATTGAGAGGTTGATGAGAAACTTTCTCTGGGATAAGGGTAATATAGGAAAAGATACGCACCTCGTGAGTTGGGAGGTTGTTGGAAAACCTTATCACCTTGGTGGTCTAGAGATTGGTAACCTAAGATCCCGTAACAAAGCCCTTTTAGCGAAATGGTTGTGGCGTTTCCCCCTTGAGTCGTCTTCCTTATGGTACAAGATAATTGTGAGTAAATATGGTCCTCATTCTTTTGAGTGGTTACTGGATGGGGTTGGGGGCATGTTTCGAAATCCATGGAAAGATATTGTTAGGGAGCTCTCTTCCTTTTCTGGTCCTGTGCATCATGTGGTTGGGGATGGGAATGATACAAATTTTTGGGAGGATAGGTGGGTGGGGGATAGACCCCTCTATCTGACCTTCCCTCGTCTCTTTTCGTTGTCCTCCTTGAAAAATCGGACAGTGGCTGACGTTTTGTTCCAATCAGGGAGTTCCCCATCTTTTTCGTTTGGGTTCCGTTGTGACTTGTCCGATAGGGAAACGACGGATGTCATGACTTTTCTTTCCTTGATTGAGGAGTTTGGTTTTAGGTTGGGGAGGAGAGATTTTCGTTGTTGGAGCCCTGACCCTTCTATCGGGTTCTCATGTAAATCCTACTTTATTTCTTTGTTGAATCCTCCTCCCAATAGTGAGTCTGTTTTTATCTCCGGTGGAAAGTGAAAATGCCGAAGAAGGTTAGGTTATTTATTTGGAAAGTTCTCCATGGTAGGGTTAATACCTTTGATAGGCTCCTGAGAAGGAATGTCCTTTTGTTTGGTCCTTTTTGTTGCAACCTTTGTCGGAAGGCGGGGGAAGATTTGGATAATATTCTTTGGAGCTGTGATTTTGCCCGATCTAGTTGGGACATTTTCTTTGATGCGTTTGGGCGACAACGGATCATCTACCCGGATTTGAGAGTGTTGATCGAAGAGTTCCTCCTCAATCCGACCCTCCATGGCAAAGGAAGATTTTTATGGCAGGTCGACATGTGTGCTCTCTTATGGAACTTATGGGGGGAGAGAAACAACAAGGTTTTTAGGGGTATAGTTAGAAGCCCAGATGATGTATGGTCTTTATCGAGATTCCATGCATCCCTTTGGGCATCGATTACCAAACTTTTTTGTAATTATCCTTTAGGTCTGATATTATTGGACTAGAGCCCTTTCCTTTAAGTGGTCTCCGTTTTGTGGGCTTGTTTTTTTTTTTTTTGCCTTGTATTCTTTCATTTATTCTCAATGAAAGCTGGTTTTTATATATAAAAAAAAGTATGAATTGCTGAGTTGTACTGTTGTATTGCTTGGGATGAGCATGTACTGTGTTATTGCTTGGGATGAACATGTACTGATGTATTGCTCGGAATGAGCATGTTTGTGGTGTTTAAACCTGATGAGTGTTGTGTTAAGCACGATGAGTCTGGCTAGCATGTTGCATGGGGATGTGTAGCATGAGTCGGGTGTGAGGCACAGCACATGGTGCGCGATTCATGTGTAGCGGAGCGTGACGCAAAAATCATGTGAGTGTGAGTGCGGAGCGTGACGCGAAAATCATGTATGAGTGGCGTAACACATGACGCGTAATTTATGTGGGGTAGGTGCAAAGCATGACGCGGAAATGAGCATGACGCGGAAATCATGTAATTGCGGAGCATGGCGCAAAAATCATGTAAATGCAGAGCATGACGTGGAAATCATGTAAATGCGGAGCATGACGCGGAAATCATGTAGTGTCTAGTGTGTGCATTGCATGGTGTGAGATGCATGATGGTTGTAATTGTTTGTTGTTTGTAACTTAGTAAGTGTGAGCTGCTTACCAGTACCACGATTGTACTGATACCCCTTCCCTATCTCCTCCCAACATTTTAGATGTTGCAGATATGGAAGATGAACCAGACTATGGTGGTGAGGAGGAGAACTTCGGGGAGGAATCCTAATGTGTTGGAGTTTCTTTTTGGTTAGGCTTTGGATAGGCTAGTTTCGGTAAAATTGAAATATTGTTCCTGAAATATTGTTCCTGTTGTGGTGAGAGGTTCACCTAGTTGTCTATGTTTTTATGAATTGGAGGTTTAGTGTTGTTTTTAGTCTTGATGGTAGAATAAAAGTTGTTTTAGTTAGCATGTTGCTGTGCTGAATTAATAAAGAGTTAGAAATATGTTATGCTGCATGGTTTAGTTTAATGCTTTCCTCTAGATGTTGCTATGAGATCTGACTCGTATAGTGAAGCTAGGTTGTGAATCAGAAAATGAAGTTTGGTGAAGTTGGGTTAAGTGTTTAGAAGTGTTGTTGTGCTTATATTAGGTTAAAGAAAAATTTTGGGTTAGCTGGTTTTACGTTGTTATGTTGTCAAAATTTTCGGTACACTCGGTTTAAATGGCTTAGAGTCGGTAAGTGGTTTAGAGATTAAGTTGCGTTGCTAGGCTAGTGGTTTAAAGAACCTGGGGCGTGACATCCACCCTTCTTTCGCTTCTTTCTGATGATTTTTTGTCATATGTGGCTTTCTCGAAGGTTAATTATTTGAATTATTTGGCTGTGTACTTTGCGAATGTCTTTGTATTGTCATGATTTTTCTTTAATTTGTCTTTTGCGGTTCCTCATCCCTCTGAATGCATATAACTGTGGTATTGTCATAGTATCCTTATCGAGAACAATCGCGAGTGATATTAAGTTCTTTTTGTATCAGATATTTTAAATACAATAGGCAATGGCTACTGAAGAAGACTCCGTCGAACAAGTTGCTGCAGCACGTAAAGAGAGATTGAGAGCTCTAAGAGCTGCTCAGGAATTGTTAAATGCTCCAGATGAGAAGACTTCTGGAGGAGAGGATAAAGAGAACGGTGCTACTGCAGATACTGAAGAAGAAATGTGAGTGTATATCTTTTTCTTCCACCAAAGACAGACTCTGCTCTATAAGTTGTTTTTTTCTTTGATTTTTTTGTTTCGATTTCTGGGGTAAGTTGAATACCGATGAGATTAGATTTGATTAAATTTTGAATGTTATTCTTCTATCCATGGATCACTTCTAAGCACATTTGTAACATTAAGGTAGGTTCAATTTGACTTCTCTAACTTTAATATCCTCTCTCAACTCTATTCGACTCTATTCTCATTTAGTTGCGCTTTTAAAGATATTGCCTATGATATCATTTCTAAATGTAGAATTGTAAACTATAATTATACTCATATACGACCTATAGATTCGTAGCTTCATGAATAAACAAACGTGAATAGATTAGAAAGATATCAATCGGGAAAGTTCATGCTCAATAAACCATTAAATTAATATTCCATTTAAAAATACTTAATTGCTCGTATCTCCTGGAAACTGAAACTCCACTAAATTAATATTCCATTGAAAGTAGAACTATGTCGGAGATGAAGAGGAAAAAAGAATAGATTTCATGATACTCCTGTCCTGAATGTTTGTCTCCTTCTCTTAGGAATGATGATGATGTCCTTCTTCCTCTGCCTCTAGCTACCTTCTTTTATCTTTGTAGCTACTGCCTGACCTTTTCCCTCCAACTTAACTATTGCTCTCTCTCATTTTCTCTTCCTCTTCCTTTAGCCATCCCTTTTATCTTTGTATCTATCGTCTGACTTTTCCCCCTTTTTTCTTATTTTTTTTTGTGCATGTTGAGATTACATGATGCCATAGTGAGCTAAGTTCTCTAGAATCTGGCTTGGAGCATGTTACAGACGGCTGCTGTATGCTGTGGCTAGTGAACTTTGTTTATGATGTATTAAAAGTGCCTGCCTTGGCAGTAGTGCCTGCATTGTCGTGGCAGTTCAAACAAAAGTTTTCTTCCTTTCCTTTGTTAGTTGCATCTATCTGTTTACAGAATGGAATCATAAGGCCACAAAAAATCCAAATAGTGCAGAAGACTAGCCAAATATTTGATAAAATAGTATTTGAAACTAACTTGTAAAGTCTTTGTAAACATGATGCATATGAAACATGCTCATGTAAGTGTCCTCTCACTAATGAGATGTTTCTTTTGTTTTCTTTCTTTGCTCTCTTTTTCTTTTTTCCTTTCTAGTTCTTAATAATATTTGGCTTGAAGAGTTTGGGATGACGATGAATGGATGGCAATGATGGTGACATATAACTTAACTGCTATTTATTTTTGGGGATATGTTTTCATGTTCAACTTCAAAAGTGTTTCAATAGATTTTGTCCCTTGCAATGGGAACATTGTGAATATAATCACATTCTGTTGTTTATTTGAATATATGTTTTGTTTGTTGTTATTGTCAACTCATTTGAAAAGTTGATGTACACAGTTACTATGCAGCATGTTAAATAGCTCTTCCCTCATTTAATAAGTGCAATATACGGACATGAGCTCATTAGTTTTGTTATTGGATTAGTTCTTGATTCTCTAATAAATTGTCCTTTTGCAGTAATCTTAGTATGAAATTTCGGAACTATGTTCCACATGATAAGGAGCTTCAGGAGGGTAAGCTTGCCCCACCTGTATTGCCGAAGTTCGAGGACCCTGTTGCTACTGAACCTCCACAATTAAAAGAGGTAGTTTTGTCAGTTACTCTATGATATGTTTTTAAACTGGTCTGTGCTCGTATTTTGTGGATCTTTTTCTATTAATTATATTCTATTGAAAAAATTTTAGGACCCATTTGTAAATATTGCTCCTAAGAAACCAAACTGGGACCTGAGAAGGGATGTGCAGAAGAAGCTTGATAAGCTTGAAAGACGTACTCAGAAAGCATTATATAAGCTTATGGGTAAGTAGTAATATTGAATTAAGGTTTACTTGAACTTGTTGATAAATCATTATTTTATTCTAGTTCTTTTACTTCTTGCTTCATTTGTTAGTGTAACAAAGTATTTAGCGAATTGAATTGGTTTGCTCTGAGAAAATATCTATGTAGTCAATTAGCATAAACATAAAATCGTTTTTGTTTTTACTGGTCCTGTTTTGGGGTCAAATGTATTCTTTTTCCATGCACCACGGCATTTATGACCAACTAGGAGATGTTGATTATCATTTAGCAAGCAATTGTGTTCTCAAGTCAACATGCCTGCTGAAATATGTTAGGCCACCAATCAAAAACGTATATGTTAGGAAAAATAAATGGGGTGGAAAGAAGATAATTGTTGGAGAAAACAACAATTAATAGGGCTGGCTGTTAGTATTCTGTTCTTGTCTATTTTTGGGCTGTATTAATAGGAGCGTAATCCTATGTCTAGTATTTTGAAGTCTTGGGTATGTTAAGAGTCAACTGGTCATAATAACTCAGATAAGGAATAGTCTATTTAATGGAAGTCTAGGAGAAGTCCAGGGTATCGAGAAGTTGTTGTAAGACCTTAGTCTTGGAGAGAAATCAGCCCTCTCGAATTGGTTGATAATCAGTAAAGCAATATTCTATCCTATCCTCTGTTTTTCTTTTATTTTGTAAGGGAAACCTTACAAAATATTGACTGCAACTTTTATCTCTAACCTTTTTCAATCTACCATGTCCCTGCATACACCGATTAAAAACCATTTCATGAAATTAATAATGTAGTTGGAGTTGATTTGATTCTGTTTGGATAATTGAGATTGATTTGGTCGTCAGTTGTGGATTTAGGATTTAACATTCTTCAATCTTGAAATTTGAACTTGCTGGGCATTTAAAATTTGGGGGATTTCTAGGTATCAAGGCTTGTGGAGCATGAAGGAGAATGGAGCCAGATTAAACCATAACCCTCACTGATAAACTCGTGAAGATGTTGAAAGTAATAGAAATGTTCATGACATCTTTTCTTCCATTTGGAGATTTATTTATTTTTAAAGGACATCACGAATACAAATATAAGGTCAGGATTTGAACTCATAATCCGGATCTTTAACCCACTGAGTTTTGTTCAAGTTGGTATTATTAGCTAGCCAGTGTTCATTGGCAGTTACAAGAGTGATTATTATCTGTATCATAAAACCGTAGAAAATTATGTGAAACTCTGAAATTACAGAGTGTTTGCACATTCAGAGCACCCTGCTTACTTGCCCTGAACTTTATTCTTTGTTCAATTTTTTTGTAGAGGAACAGGAAAAGCAAAAGCAGTCAGCTGAAGGAGACGATGATCAAAATGGTACGGAGGAATAGTATGCCACACAAGTTATGAGTTCTCAAATATTACAGTTGTGTAATATTCGCGACTACTCCGACATCAAACCATGCTTTGAGAAATTTGTCCCTGAAGAAAAATGGGCGTTGATGGCTCATATGGTCAGTTTTTCTGTGACCTTTCTGATCATTTTTGGCTGAAAATCTTTAGTTCATCTATTGTAGCTCATGGTGTCTCTTGACTAATTACACCCCATAGTGTATCTCAGACTAGATAGTGAGTGATTTGTAATCTACCTATACTACCTTTAAATAACTTTATATTGCACTACATGTTTATCTTCATTATGAACCCTTTTTTTCCTTTTTATCTGCAAGTTTTAATCTATGCACATTAACTTTGCATATGATTTC

mRNA sequence

ATGACGTGTCTGTGCTTCCTAGTCTGTGAGAGTATTGAGAGGTTGATGAGAAACTTTCTCTGGGATAAGGGTAATATAGGAAAAGATACGCACCTCGTGAGTTGGGAGGTTGTTGGAAAACCTTATCACCTTGGTGGTCTAGAGATTGGTAACCTAAGATCCCGTAACAAAGCCCTTTTAGCGAAATGGTTGTGGCGTTTCCCCCTTGAGTCGTCTTCCTTATGGTACAAGATAATTGTGAGTAAATATGGTCCTCATTCTTTTGAGTGGTTACTGGATGGGGTTGGGGGCATGTTTCGAAATCCATGGAAAGATATTGTTAGGGAGCTCTCTTCCTTTTCTGGTCCTGTGCATCATGTGGTTGGGGATGGGAATGATACAAATTTTTGGGAGGATAGGTGGGTGGGGGATAGACCCCTCTATCTGACCTTCCCTCGTCTCTTTTCGTTGTCCTCCTTGAAAAATCGGACAGTGGCTGACGTTTTGTTCCAATCAGGGAGTTCCCCATCTTTTTCGTTTGGGTTCCGTTGTGACTTGTCCGATAGGGAAACGACGGATGTCATGACTTTTCTTTCCTTGATTGAGGAGTTTGGTTTTAGGTTGGGGAGGAGAGATTTTCGTTGTTGGAGCCCTGACCCTTCTATCGGGTTCTCATGTAAATCCTACTTTATTTCTTTGTTGAATCCTCCTCCCAATAGTGAGTCTGCGGGGGAAGATTTGGATAATATTCTTTGGAGCTGTGATTTTGCCCGATCTAGTTGGGACATTTTCTTTGATGCGTTTGGGCGACAACGGATCATCTACCCGGATTTGAGAGTGTTGATCGAAGAGTTCCTCCTCAATCCGACCCTCCATGGCAAAGGAAGATTTTTATGGCAGGTCGACATGTGTGCAAAGCATGACGCGGAAATGAGCATGACGCGGAAATCATGTAATTGCGGAGCATGGCGCAAAAATCATGCAATGGCTACTGAAGAAGACTCCGTCGAACAAGTTGCTGCAGCACGTAAAGAGAGATTGAGAGCTCTAAGAGCTGCTCAGGAATTGTTAAATGCTCCAGATGAGAAGACTTCTGGAGGAGAGGATAAAGAGAACGGTGCTACTGCAGATACTGAAGAAGAAATTAATCTTAGTATGAAATTTCGGAACTATGTTCCACATGATAAGGAGCTTCAGGAGGGTAAGCTTGCCCCACCTGTATTGCCGAAGTTCGAGGACCCTGTTGCTACTGAACCTCCACAATTAAAAGAGGACCCATTTGTAAATATTGCTCCTAAGAAACCAAACTGGGACCTGAGAAGGGATGTGCAGAAGAAGCTTGATAAGCTTGAAAGACGTACTCAGAAAGCATTATATAAGCTTATGGAGGAACAGGAAAAGCAAAAGCAGTCAGCTGAAGGAGACGATGATCAAAATGGTACGGAGGAATAG

Coding sequence (CDS)

ATGACGTGTCTGTGCTTCCTAGTCTGTGAGAGTATTGAGAGGTTGATGAGAAACTTTCTCTGGGATAAGGGTAATATAGGAAAAGATACGCACCTCGTGAGTTGGGAGGTTGTTGGAAAACCTTATCACCTTGGTGGTCTAGAGATTGGTAACCTAAGATCCCGTAACAAAGCCCTTTTAGCGAAATGGTTGTGGCGTTTCCCCCTTGAGTCGTCTTCCTTATGGTACAAGATAATTGTGAGTAAATATGGTCCTCATTCTTTTGAGTGGTTACTGGATGGGGTTGGGGGCATGTTTCGAAATCCATGGAAAGATATTGTTAGGGAGCTCTCTTCCTTTTCTGGTCCTGTGCATCATGTGGTTGGGGATGGGAATGATACAAATTTTTGGGAGGATAGGTGGGTGGGGGATAGACCCCTCTATCTGACCTTCCCTCGTCTCTTTTCGTTGTCCTCCTTGAAAAATCGGACAGTGGCTGACGTTTTGTTCCAATCAGGGAGTTCCCCATCTTTTTCGTTTGGGTTCCGTTGTGACTTGTCCGATAGGGAAACGACGGATGTCATGACTTTTCTTTCCTTGATTGAGGAGTTTGGTTTTAGGTTGGGGAGGAGAGATTTTCGTTGTTGGAGCCCTGACCCTTCTATCGGGTTCTCATGTAAATCCTACTTTATTTCTTTGTTGAATCCTCCTCCCAATAGTGAGTCTGCGGGGGAAGATTTGGATAATATTCTTTGGAGCTGTGATTTTGCCCGATCTAGTTGGGACATTTTCTTTGATGCGTTTGGGCGACAACGGATCATCTACCCGGATTTGAGAGTGTTGATCGAAGAGTTCCTCCTCAATCCGACCCTCCATGGCAAAGGAAGATTTTTATGGCAGGTCGACATGTGTGCAAAGCATGACGCGGAAATGAGCATGACGCGGAAATCATGTAATTGCGGAGCATGGCGCAAAAATCATGCAATGGCTACTGAAGAAGACTCCGTCGAACAAGTTGCTGCAGCACGTAAAGAGAGATTGAGAGCTCTAAGAGCTGCTCAGGAATTGTTAAATGCTCCAGATGAGAAGACTTCTGGAGGAGAGGATAAAGAGAACGGTGCTACTGCAGATACTGAAGAAGAAATTAATCTTAGTATGAAATTTCGGAACTATGTTCCACATGATAAGGAGCTTCAGGAGGGTAAGCTTGCCCCACCTGTATTGCCGAAGTTCGAGGACCCTGTTGCTACTGAACCTCCACAATTAAAAGAGGACCCATTTGTAAATATTGCTCCTAAGAAACCAAACTGGGACCTGAGAAGGGATGTGCAGAAGAAGCTTGATAAGCTTGAAAGACGTACTCAGAAAGCATTATATAAGCTTATGGAGGAACAGGAAAAGCAAAAGCAGTCAGCTGAAGGAGACGATGATCAAAATGGTACGGAGGAATAG

Protein sequence

MTCLCFLVCESIERLMRNFLWDKGNIGKDTHLVSWEVVGKPYHLGGLEIGNLRSRNKALLAKWLWRFPLESSSLWYKIIVSKYGPHSFEWLLDGVGGMFRNPWKDIVRELSSFSGPVHHVVGDGNDTNFWEDRWVGDRPLYLTFPRLFSLSSLKNRTVADVLFQSGSSPSFSFGFRCDLSDRETTDVMTFLSLIEEFGFRLGRRDFRCWSPDPSIGFSCKSYFISLLNPPPNSESAGEDLDNILWSCDFARSSWDIFFDAFGRQRIIYPDLRVLIEEFLLNPTLHGKGRFLWQVDMCAKHDAEMSMTRKSCNCGAWRKNHAMATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKFRNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTEE
Homology
[Close]
BLAST of Spg014580 vs. NCBI nr
Match: XP_022955111.1 (coiled-coil domain-containing protein 12-like [Cucurbita moschata] >XP_022955112.1 coiled-coil domain-containing protein 12-like [Cucurbita moschata] >XP_022955113.1 coiled-coil domain-containing protein 12-like [Cucurbita moschata] >XP_022955114.1 coiled-coil domain-containing protein 12-like [Cucurbita moschata])

HSP 1 Score: 275.4 bits (703), Expect = 9.2e-70
Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0 

Query: 322 MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 381
           MATEEDSVEQVAAAR+ERLRALRAAQELLNAPDEKTSGGED+ENGA ADT EEINL MKF
Sbjct: 1   MATEEDSVEQVAAARQERLRALRAAQELLNAPDEKTSGGEDQENGAAADT-EEINLGMKF 60

Query: 382 RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 441
           RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 442 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 476
           KLERRTQKALYKLMEEQEKQKQSAEGDDDQN TE
Sbjct: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNDTE 153

[Close]
BLAST of Spg014580 vs. NCBI nr
Match: KAG6572999.1 (Coiled-coil domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 275.4 bits (703), Expect = 9.2e-70
Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0 

Query: 322 MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 381
           MATEEDSVEQVAAAR+ERLRALRAAQELLNAPDEKTSGGED+ENGA ADT EEINL MKF
Sbjct: 1   MATEEDSVEQVAAARQERLRALRAAQELLNAPDEKTSGGEDQENGAAADT-EEINLGMKF 60

Query: 382 RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 441
           RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 442 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 476
           KLERRTQKALYKLMEEQEKQKQSAEGDDDQN TE
Sbjct: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNDTE 153

[Close]
BLAST of Spg014580 vs. NCBI nr
Match: XP_023542240.1 (coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo] >XP_023542241.1 coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo] >XP_023542242.1 coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo] >XP_023542243.1 coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.0 bits (702), Expect = 1.2e-69
Identity = 148/154 (96.10%), Postives = 149/154 (96.75%), Query Frame = 0 

Query: 322 MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 381
           MATEEDSVEQVAAAR+ERLRALRAAQELLNAPDEKTSGGEDKENGA ADT EE NL MKF
Sbjct: 1   MATEEDSVEQVAAARQERLRALRAAQELLNAPDEKTSGGEDKENGAAADT-EETNLGMKF 60

Query: 382 RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 441
           RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 442 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 476
           KLERRTQKALYKLMEEQEKQKQSAEGDDDQN TE
Sbjct: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNDTE 153

[Close]
BLAST of Spg014580 vs. NCBI nr
Match: XP_022994277.1 (coiled-coil domain-containing protein 12-like isoform X1 [Cucurbita maxima] >XP_022994278.1 coiled-coil domain-containing protein 12-like isoform X2 [Cucurbita maxima] >XP_022994279.1 coiled-coil domain-containing protein 12-like isoform X1 [Cucurbita maxima] >XP_022994280.1 coiled-coil domain-containing protein 12-like isoform X1 [Cucurbita maxima] >XP_022994281.1 coiled-coil domain-containing protein 12-like isoform X2 [Cucurbita maxima] >XP_022994282.1 coiled-coil domain-containing protein 12-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 273.1 bits (697), Expect = 4.6e-69
Identity = 146/154 (94.81%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 322 MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 381
           MATEEDSVEQVAAAR+ERLRALR AQELLNAPDEKTSGGED+ENG  ADT EE NL MKF
Sbjct: 1   MATEEDSVEQVAAARQERLRALRTAQELLNAPDEKTSGGEDQENGTAADT-EETNLGMKF 60

Query: 382 RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 441
           RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 442 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 476
           KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE
Sbjct: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 153

[Close]
BLAST of Spg014580 vs. NCBI nr
Match: XP_038894163.1 (coiled-coil domain-containing protein 12 [Benincasa hispida])

HSP 1 Score: 268.1 bits (684), Expect = 1.5e-67
Identity = 145/154 (94.16%), Postives = 146/154 (94.81%), Query Frame = 0 

Query: 322 MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 381
           MATEEDSVEQVAAARKERLRALRAAQELLNA DEK SGGEDKENGATAD  EE NL+MKF
Sbjct: 1   MATEEDSVEQVAAARKERLRALRAAQELLNASDEKNSGGEDKENGATADA-EETNLNMKF 60

Query: 382 RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 441
           RNYVPHDKELQEGKLAPPVLPKFEDPV TEP QLKEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVTTEPAQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 442 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 476
           KLERRTQKALYKLMEEQEKQKQSAEGDDDQNG E
Sbjct: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGAE 153

[Close]
BLAST of Spg014580 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.6e-16
Identity = 47/137 (34.31%), Postives = 65/137 (47.45%), Query Frame = 0 

Query: 8   VCESIERLMRNFLWDKGNIGKDTHLVSWEVVGKPYHLGGLEIGNLRSRNKALLAKWLWRF 67
           +   +++L R FLW      K  HLV W  V  P   GGL +   +S N+AL++K  WR 
Sbjct: 62  ILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRL 121

Query: 68  PLESSSLWYKIIVSKYGP---HSFEWLLDGVGGMFRNPWKDIVRELSS-FSGPVHHVVGD 127
             E +SLW  ++  KY         WL+    G + + W+ I   L    S  V  + GD
Sbjct: 122 LQEKNSLWTLVLQKKYHVGEIRDSRWLIP--KGSWSSTWRSIAIGLRDVVSHGVGWIPGD 181

Query: 128 GNDTNFWEDRWVGDRPL 141
           G    FW DRWV  +PL
Sbjct: 182 GQQIRFWTDRWVSGKPL 196

[Close]
BLAST of Spg014580 vs. ExPASy Swiss-Prot
Match: Q8R344 (Coiled-coil domain-containing protein 12 OS=Mus musculus OX=10090 GN=Ccdc12 PE=1 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 1.2e-11
Identity = 57/150 (38.00%), Postives = 90/150 (60.00%), Query Frame = 0 

Query: 329 VEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTE-----EEI--NLSMKF 388
           +E+ A  RKERL+ALR          EKT G +D+E+G     +     EE+  +  ++ 
Sbjct: 11  LEEEALRRKERLKALR----------EKT-GRKDREDGEPQTKQLREEGEEVGKHRGLRL 70

Query: 389 RNYVPHDKELQEGKL--APPVL----PKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRD 448
           RNYVP D++L+  ++  A PV      K +   A   P ++E    N+AP+KP+WDL+RD
Sbjct: 71  RNYVPEDEDLKRRRVPQAKPVAVEEKVKEQLEAAKPEPVIEEVDLANLAPRKPDWDLKRD 130

Query: 449 VQKKLDKLERRTQKALYKLMEEQEKQKQSA 466
           V KKL+KLE+RTQ+A+ +L+ E+ K ++ +
Sbjct: 131 VAKKLEKLEKRTQRAIAELIRERLKGQEDS 149

[Close]
BLAST of Spg014580 vs. ExPASy Swiss-Prot
Match: Q8WUD4 (Coiled-coil domain-containing protein 12 OS=Homo sapiens OX=9606 GN=CCDC12 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.5e-11
Identity = 59/161 (36.65%), Postives = 93/161 (57.76%), Query Frame = 0 

Query: 329 VEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENG-------ATADTEEEINLSMKF 388
           +E+ A  RKERL+ALR          EKT G +DKE+G          + E E +  ++ 
Sbjct: 11  LEEEALRRKERLKALR----------EKT-GRKDKEDGEPKTKHLREEEEEGEKHRELRL 70

Query: 389 RNYVPHDKELQEGKL--APPVL----PKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRD 448
           RNYVP D++L++ ++  A PV      K +   A   P ++E    N+AP+KP+WDL+RD
Sbjct: 71  RNYVPEDEDLKKRRVPQAKPVAVEEKVKEQLEAAKPEPVIEEVDLANLAPRKPDWDLKRD 130

Query: 449 VQKKLDKLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTEE 477
           V KKL+KL++RTQ+A+ +L+ E+ K ++ +        TE+
Sbjct: 131 VAKKLEKLKKRTQRAIAELIRERLKGQEDSLASAVDAATEQ 160

[Close]
BLAST of Spg014580 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.5e-09
Identity = 42/140 (30.00%), Postives = 65/140 (46.43%), Query Frame = 0 

Query: 1   MTC--LCFLVCESIERLMRNFLWDKGNIGKDTHLVSWEVVGKPYH-LGGLEIGNLRSRNK 60
           M+C  L  L+C+ +   M  F W      +    V+W+ + K     GGL   +L   N+
Sbjct: 8   MSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQ 67

Query: 61  ALLAKWLWRFPLESSSLWYKIIVSKYGPHSFEWLLDGVGGMFRNPWKDIVRELSSFSGPV 120
           ALLAK  +R   +  +L  +++ S+Y PHS   +   VG      W+ I+      S  +
Sbjct: 68  ALLAKQSFRIIHQPHTLLSRLLRSRYFPHS-SMMECSVGTRPSYAWRSIIHGRELLSRGL 127

Query: 121 HHVVGDGNDTNFWEDRWVGD 138
              +GDG  T  W DRW+ D
Sbjct: 128 LRTIGDGIHTKVWLDRWIMD 146

[Close]
BLAST of Spg014580 vs. ExPASy TrEMBL
Match: A0A6J1GST8 (coiled-coil domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111457177 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 4.5e-70
Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0 

Query: 322 MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 381
           MATEEDSVEQVAAAR+ERLRALRAAQELLNAPDEKTSGGED+ENGA ADT EEINL MKF
Sbjct: 1   MATEEDSVEQVAAARQERLRALRAAQELLNAPDEKTSGGEDQENGAAADT-EEINLGMKF 60

Query: 382 RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 441
           RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 442 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 476
           KLERRTQKALYKLMEEQEKQKQSAEGDDDQN TE
Sbjct: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNDTE 153

[Close]
BLAST of Spg014580 vs. ExPASy TrEMBL
Match: A0A6J1JYP1 (coiled-coil domain-containing protein 12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490058 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.2e-69
Identity = 146/154 (94.81%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 322 MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 381
           MATEEDSVEQVAAAR+ERLRALR AQELLNAPDEKTSGGED+ENG  ADT EE NL MKF
Sbjct: 1   MATEEDSVEQVAAARQERLRALRTAQELLNAPDEKTSGGEDQENGTAADT-EETNLGMKF 60

Query: 382 RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 441
           RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 442 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 476
           KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE
Sbjct: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 153

[Close]
BLAST of Spg014580 vs. ExPASy TrEMBL
Match: A0A6J1DLK0 (coiled-coil domain-containing protein 12 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022269 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 2.7e-67
Identity = 143/154 (92.86%), Postives = 146/154 (94.81%), Query Frame = 0 

Query: 322 MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 381
           MATEEDSVEQVAAARKERLRALRAAQELLN PDEKTSGGEDK+NG   DT EE NLSMKF
Sbjct: 1   MATEEDSVEQVAAARKERLRALRAAQELLNTPDEKTSGGEDKDNGVIEDT-EETNLSMKF 60

Query: 382 RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 441
           RNYVPHDKELQEGKLAPPVLPKFEDPVA EPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVANEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 442 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 476
           KLERRTQKALYKLM+EQEKQK+SAEGDD QNGTE
Sbjct: 121 KLERRTQKALYKLMKEQEKQKESAEGDDVQNGTE 153

[Close]
BLAST of Spg014580 vs. ExPASy TrEMBL
Match: A0A6J1E719 (coiled-coil domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111431306 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 3.5e-67
Identity = 145/156 (92.95%), Postives = 146/156 (93.59%), Query Frame = 0 

Query: 322 MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTE--EEINLSM 381
           MATE+DSVEQVAAARKERLRALRAAQELLNA DEK SGGEDKENGAT D E  EE NLSM
Sbjct: 1   MATEDDSVEQVAAARKERLRALRAAQELLNASDEKNSGGEDKENGATEDPEDPEETNLSM 60

Query: 382 KFRNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKK 441
           KFRNYVPHDKELQEGKL PP LPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKK
Sbjct: 61  KFRNYVPHDKELQEGKLVPPELPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKK 120

Query: 442 LDKLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 476
           LDKLERRTQKALYKLMEEQEKQKQSAEGDDDQN TE
Sbjct: 121 LDKLERRTQKALYKLMEEQEKQKQSAEGDDDQNITE 156

[Close]
BLAST of Spg014580 vs. ExPASy TrEMBL
Match: A0A1S3ATB1 (coiled-coil domain-containing protein 12 OS=Cucumis melo OX=3656 GN=LOC103482658 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 5.1e-66
Identity = 141/154 (91.56%), Postives = 145/154 (94.16%), Query Frame = 0 

Query: 322 MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 381
           MATEEDS EQVAAARKERL+ALRAAQELLNA DEK S GEDKENGATADT +E NL+MKF
Sbjct: 1   MATEEDSFEQVAAARKERLKALRAAQELLNASDEKNSVGEDKENGATADT-DETNLNMKF 60

Query: 382 RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 441
           RNYVPHDKELQEGKLAPPVLPKFEDPV TEPPQ KEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQQKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 442 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 476
           KLERRTQKALYKLMEEQEKQKQ+AEGDDDQNG E
Sbjct: 121 KLERRTQKALYKLMEEQEKQKQAAEGDDDQNGAE 153

[Close]
BLAST of Spg014580 vs. TAIR 10
Match: AT3G05070.1 (CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Has 292 Blast hits to 292 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42 (source: NCBI BLink). )

HSP 1 Score: 173.3 bits (438), Expect = 4.6e-43
Identity = 100/149 (67.11%), Postives = 116/149 (77.85%), Query Frame = 0 

Query: 322 MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 381
           MA+E++S+EQ AAARKE L+ALRAAQEL           E KE+G     EE+   +MKF
Sbjct: 1   MASEDESIEQKAAARKEALKALRAAQEL----------SETKEDGEDEAVEED-GPAMKF 60

Query: 382 RNYVPHDKELQEGKLAPPVLPKFEDPVATEPP--QLKEDPFVNIAPKKPNWDLRRDVQKK 441
           RNYVP  KELQ+GKLAPP LPKFEDP+   PP  + KEDPFVNIAPKKPNWDLRRDVQKK
Sbjct: 61  RNYVPQAKELQDGKLAPPELPKFEDPIVALPPAVEKKEDPFVNIAPKKPNWDLRRDVQKK 120

Query: 442 LDKLERRTQKALYKLMEEQEKQKQSAEGD 469
           LDKLERRTQKA++KLMEEQEK+++ AE D
Sbjct: 121 LDKLERRTQKAMHKLMEEQEKEREMAEAD 138

[Close]
BLAST of Spg014580 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 65.1 bits (157), Expect = 1.8e-10
Identity = 42/140 (30.00%), Postives = 65/140 (46.43%), Query Frame = 0 

Query: 1   MTC--LCFLVCESIERLMRNFLWDKGNIGKDTHLVSWEVVGKPYH-LGGLEIGNLRSRNK 60
           M+C  L  L+C+ +   M  F W      +    V+W+ + K     GGL   +L   N+
Sbjct: 8   MSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQ 67

Query: 61  ALLAKWLWRFPLESSSLWYKIIVSKYGPHSFEWLLDGVGGMFRNPWKDIVRELSSFSGPV 120
           ALLAK  +R   +  +L  +++ S+Y PHS   +   VG      W+ I+      S  +
Sbjct: 68  ALLAKQSFRIIHQPHTLLSRLLRSRYFPHS-SMMECSVGTRPSYAWRSIIHGRELLSRGL 127

Query: 121 HHVVGDGNDTNFWEDRWVGD 138
              +GDG  T  W DRW+ D
Sbjct: 128 LRTIGDGIHTKVWLDRWIMD 146

The following BLAST results are available for this feature:
BLAST of Spg014580 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022955111.19.2e-7096.10coiled-coil domain-containing protein 12-like [Cucurbita moschata] >XP_022955112... [more]
KAG6572999.19.2e-7096.10Coiled-coil domain-containing protein 12, partial [Cucurbita argyrosperma subsp.... [more]
XP_023542240.11.2e-6996.10coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo] >XP_0... [more]
XP_022994277.14.6e-6994.81coiled-coil domain-containing protein 12-like isoform X1 [Cucurbita maxima] >XP_... [more]
XP_038894163.11.5e-6794.16coiled-coil domain-containing protein 12 [Benincasa hispida][more]
BLAST of Spg014580 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P0C2F63.6e-1634.31Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Q8R3441.2e-1138.00Coiled-coil domain-containing protein 12 OS=Mus musculus OX=10090 GN=Ccdc12 PE=1... [more]
Q8WUD44.5e-1136.65Coiled-coil domain-containing protein 12 OS=Homo sapiens OX=9606 GN=CCDC12 PE=1 ... [more]
P932952.5e-0930.00Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Spg014580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GST84.5e-7096.10coiled-coil domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1JYP12.2e-6994.81coiled-coil domain-containing protein 12-like isoform X1 OS=Cucurbita maxima OX=... [more]
A0A6J1DLK02.7e-6792.86coiled-coil domain-containing protein 12 isoform X1 OS=Momordica charantia OX=36... [more]
A0A6J1E7193.5e-6792.95coiled-coil domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A1S3ATB15.1e-6691.56coiled-coil domain-containing protein 12 OS=Cucumis melo OX=3656 GN=LOC103482658... [more]
BLAST of Spg014580 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G05070.14.6e-4367.11CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Ha... [more]
ATMG00310.11.8e-1030.00RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 433..468
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 451..469
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 397..426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..372
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 451..476
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 355..370
IPR013169mRNA splicing factor Cwf18-likePFAMPF08315cwf18coord: 329..457
e-value: 8.3E-34
score: 117.1
IPR013169mRNA splicing factor Cwf18-likePANTHERPTHR31551PRE-MRNA-SPLICING FACTOR CWF18coord: 322..466

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg014580.1Spg014580.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0071014 post-mRNA release spliceosomal complex
cellular_component GO:0005684 U2-type spliceosomal complex