Spg014554 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg014554
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	R3H-assoc domain-containing protein
Location	scaffold3: 43488513 .. 43492872 (-)
RNA-Seq Expression	Spg014554
Synteny	Spg014554

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAGTTCATTCCCAGTGTGAAGGGCATTTTTGTCATTTCAGAAATGGGTTTCGGTGGCGGTGAGCGGCGGAGAAGACGTCTCTCAATCCCATCTGAAACAGAATATTCTTCCGAATCTAATCCCTCTCGCTGTTCCTCTTTCAATTTCTAAGGCCTCTGTTTGTTCCTCCTTTTCCAACCCTTCGATTCGATTTTGCCTACTTTTCTGATCTCCCTCATCTTCATCCTCCATCGATTCTCCCTTTCCCTCTGCTCATCCAGCTCAAATCACCCTCCCAACAGGAATTTCAATCCCATCGACAGGCCAAAAGCACGACTTGGGGTTTCGATCGGATTCTCTGTTTCCCTTCCAATCATGGCATCCACCGATGTGCTTAAGCGAGAACAGAATCGTTTCACCTTTTCCCCTCTCAGCGATCCACTTAAAGGTACTTTTTCTTCTCTTTTCTCGATCGTATCTGCTGATTGATAAAGGATCCTTTGTTTAGATTTTGTAATACCCATTTGAATGATTTTGCTGTTTCGGTGACGTGATTGTTGAGTTTTCTTTGGGATTCGTGTTTCTCTCCGTCGTCTTATTGGGTTATTTTCGCAGATGATGCGGATTCTCGGGGGATGTCTATCGAGAAGAAGATTGAATTCTTGGAGAGCTTGACTGGGAAGGTGGGGTGTTTGGGAATGTTACAAATGTTCTTGTTAAACCTTGATGATTTCCATCAGGACTGTTCTTGAACTGCATGCTTTTCTTGGATGTAGTTTTGTTGATGCGATATATGCTCTTGAAATGTGCTTTGGATGAAGTGGAAGTGTACTTCTTAAATGGGAGTTTATTACATGGTTATCTGATGAGGAGTATTTACTAAAATTTATGGATGTCAATCTAGGTTTTTTGTTTTGTATTTTTTTTGTGCTAATACTATTAGCACCATTTTAAGGGAAAAGTTGTGACCTCCTCTGTTCATTTTTTTTAAGATCATATTTTGCATTTTTATTTGGAGTAGTTTCATGTGGCAGCAAGATTGTATAGTATTTGCCATCTCTTCTCTTATTGAAAATTGGGATTACATTGAAAATATTCATCTCAATGCTAAATGTGCTACCTGAGTGACACCACTCTTATGATATGAAGTGCAAAAGTGCATATATTATTTGCCTGTGTTCATATTCTTCTCACTCCCCAAAATTTTATTAAAATGCTCCAGTTTGAGCTTTCTTATTTAATTTTTGCTAGTCTTTGTCCATGACACTTCTCCTTTTTGTTAACTTTTTATTTTTTTCCTTTACACTTCTCAGGTTACTAACAGGAAGTCTCGCAGATGGTTAAATGATCGTCTTCTGATGGAGCTTGTTCCTCGTTTGAATGCTGAAGAAATCAGAGGCTTGTTTGCTCCACCACCTTGGGGTATAATGCATTTAAAGAATCTGTCCATTATATAATTATCCAAGCTGTGATGAGAGTTACTTCTTAGTGATATAGATGCTAGATGTCTCAGAAATTAGAGCCTGCTTTCCATCACCTTGTGTCGTGTTACATTATAGGATTCAAAGTAAGAAATTGAAGTAGCTGTTCGTTCATTAGCCGTCAGGCACCTAGTTACAACCAAGGAGAATTCGTGAGCTCTGCCTTCTCTGTCAAAAGACCTGCAGAACCTTCCTATCATACACTTGTATATTTTGTTGATTTATACTTTATAGATGTTAAAGTTATCACAAGGATTATTGGGAAAATGATCTAAACTCTGAAGTTTTGTTAAAGTTGTCCCAAGGATTATTGGGAAAGTGATCTAAACTGTGAAGTTGTGTTGATCACAAGATTATTGCGAAAGTGATTTATACTATCAAGAATTTTTTTGAAGTTATCACGAGTATTATTGGGAGAGTGATCTAAACTATGAAGTTTGGGGAAATTCAGTTTTTGTTTCTGTAAAAAAGAATGATATTTTTACTAGCAATATATTGAAAATGTCAAGTTGAAAATGTCAACTTGGCACCAGTAAGAATTTGAGTAGCATGCTAGAAATGTTAGGCCCCATTTGATAGCCATCTGGTTTTTTAAAATGAAGCTTAGAAACACTACCTCCACCTATAAGTTAAGTTTCTTTGTTTTGTTATCTACCTTCTTCCCACGTTCTCAAAATAAGTTTTGAAAACTAAAAGAAGTAGTTTCCATAAACTTGTTTTTGCTTTTGGAATTGGACTAAGAATTCAAATCTTTTCTTAACAAAGATGAAAACCATGGTAAGGAATTGGGGGTTTTATTCTCCCTCCCTCCTTTTGGTGTTATTCTGGTCATGCTTGAGTTGATTTGTGATAGACACTTTTGTTGTATCTAGTTGCTTTACTCTTAACTCTTAGAGGGAATGGCTACATCTGCCCGCCTTTCTCTCCTATGCTAATTTTTATTGATCCTTTTACTTGAGCCTAGAAATTCCTCACACTGGTGAAAGGATTTATCATGGTTTGAGGTTAATCTGTAGGTGATGATGTACGGCCCACAACATTCTCCATGACTAATGCAGGAGACTGGGACAAGTTCAGGAGTATCGACATGGATAAAGAGGTTTTTTTTTCTCACTCATGTTAATTTTGATTTTTTTTTTTAAATTAGAGAATAGCCTAGTTAGATGTGTAAGAGCATAATCTGAATATGTGATTTTCTTGTTAGGCTAAGTTCATTGGAGTCTTGGAGAACTCATCCCCTAAGAGAAAGGGTCATATAGATGCTGACAAAATGGCTTTCTTGAATGCCTGGCGCAGAATTGAGTGTCGAACAAGAGAGGCACTTCGCCGTAGTTTTCTTCCAGAGCTCGTTGAGGGTTTTGAGGTATGTTTTTGTAGAAAACTCTGATCTTTTTAGCTCGTTTTCCAAATGTTGGTTGTTCACGAGTCTAGACTCTTGTTCTGCATTTGCTGGATAGATAGGTTATTTTCTCTCCCTGTTCTTACCCATTCGGTGGTTTAAAACACTAATGGATATATGTTTACATATACAACTACACATTTAAAAGATCCGATGGGGTTCATCTGTATATCATTGTTCTTACATGATTGTACAAAGCTGCATGTTGGTTGAAGAGTGGCAAGGCATCAGTCGATTCTACTAATAACTTGGGGTGCATTTTATTTTTTCAGGAGTGCATAAGATCATTCATTTCAGACCCTAGTAATGAAAATGTCCTAACTTTGCGGGTTCAAGATCCATTCCACAGATTATTGCTGCATGGAGTTTGTGAGGTATTTCCTCTTGGTTCAATTTGAAAAAATGAACTTGCTCAACCATGAAATAAAAAATATACCTACTTCATATGACTTGACTCACTGTAATTTATCTGACTTGGAATGGTTTATGGTTATAGGAATTAGACCTATGAAAAATGTTATTATACACACTGGTCTATGATTGACACGTGTGACGTGTCGTGCATGCGCGCACACAGCTTCTATATACAACAGTTCATTAAGGATGTAATACTTTTTGAACTTTTACAGAAGTAAAGATAAATTGAAAAATGACTCCAATATTAAAGACTAAATTGTACTTTTATAACCAAAATAAAAAGGTGAAATTGAAAAATGACTTAAATATTAAAGACTAAATTGTATATTTATAACCACAAGTGACAGGAAGCTGCTCTTGATGCCTATTCCTAAAGATGAACTTCTCATAAGTTGGACTGTTGAGTTCTATTTAGCTGACTTTTTTTGGCATCATATGAATTGTTTTCTTGGCAGTTCTACAACTTGGACTCCGTGACTGTTCCCGAGTCGAAGAGTGGTGGCTCTACGAAGATGACTCGAATAACAAGGAAGAAGAAGGCCATGGTTGAGATCCCAAATATAACTCTGACCCATTTTCTGAAAATGTCCAAAGAAGGAACATGGTAATTTCGATTCATTAGATAAAGAAACTTGATAGGTCCTTTCATTAATGTTTATTACAATAATATAAAGGATTCAATGTAGAGTATTTAGACATCAGGTACTGTACAGTTGTTGCTCATATCCTGCTGCTGGACTGACCTACTGTAAATCATCTCTTCCTTATCCTTTTAGCACCAATTGTACCATTTGTATCATTTGAACAGGGAAATGCCTTGTTTCTATTATTCAACAAATGCCTTCCTTTTCTAAATTTGGTTGGACTTCAACCGAGTGTTATCGTGTCGATGGATATGTCTCTTCCCAATCTGATTGATAAAAAAAATGTTGATGAAATTGTGGGCAAATGATGACAAGCTTTTGTAATGGAAGATTGTGGATTGATCTACTATGAGGATGAATTAATGTAGATGGGATGAAATTGTCAAGAAGTTTAATTATTTCAAAGCCAAAGGGTAATGTCTAATCTCATTTTTATGGC

mRNA sequence

ATGGCATCCACCGATGTGCTTAAGCGAGAACAGAATCGTTTCACCTTTTCCCCTCTCAGCGATCCACTTAAAGATGATGCGGATTCTCGGGGGATGTCTATCGAGAAGAAGATTGAATTCTTGGAGAGCTTGACTGGGAAGGTTACTAACAGGAAGTCTCGCAGATGGTTAAATGATCGTCTTCTGATGGAGCTTGTTCCTCGTTTGAATGCTGAAGAAATCAGAGGCTTGTTTGCTCCACCACCTTGGGGTGATGATGTACGGCCCACAACATTCTCCATGACTAATGCAGGAGACTGGGACAAGTTCAGGAGTATCGACATGGATAAAGAGGCTAAGTTCATTGGAGTCTTGGAGAACTCATCCCCTAAGAGAAAGGGTCATATAGATGCTGACAAAATGGCTTTCTTGAATGCCTGGCGCAGAATTGAGTGTCGAACAAGAGAGGCACTTCGCCGTAGTTTTCTTCCAGAGCTCGTTGAGGGTTTTGAGGAGTGCATAAGATCATTCATTTCAGACCCTAGTAATGAAAATGTCCTAACTTTGCGGGTTCAAGATCCATTCCACAGATTATTGCTGCATGGAGTTTGTGAGTTCTACAACTTGGACTCCGTGACTGTTCCCGAGTCGAAGAGTGGTGGCTCTACGAAGATGACTCGAATAACAAGGAAGAAGAAGGCCATGGTTGAGATCCCAAATATAACTCTGACCCATTTTCTGAAAATGTCCAAAGAAGGAACATGGTAA

Coding sequence (CDS)

ATGGCATCCACCGATGTGCTTAAGCGAGAACAGAATCGTTTCACCTTTTCCCCTCTCAGCGATCCACTTAAAGATGATGCGGATTCTCGGGGGATGTCTATCGAGAAGAAGATTGAATTCTTGGAGAGCTTGACTGGGAAGGTTACTAACAGGAAGTCTCGCAGATGGTTAAATGATCGTCTTCTGATGGAGCTTGTTCCTCGTTTGAATGCTGAAGAAATCAGAGGCTTGTTTGCTCCACCACCTTGGGGTGATGATGTACGGCCCACAACATTCTCCATGACTAATGCAGGAGACTGGGACAAGTTCAGGAGTATCGACATGGATAAAGAGGCTAAGTTCATTGGAGTCTTGGAGAACTCATCCCCTAAGAGAAAGGGTCATATAGATGCTGACAAAATGGCTTTCTTGAATGCCTGGCGCAGAATTGAGTGTCGAACAAGAGAGGCACTTCGCCGTAGTTTTCTTCCAGAGCTCGTTGAGGGTTTTGAGGAGTGCATAAGATCATTCATTTCAGACCCTAGTAATGAAAATGTCCTAACTTTGCGGGTTCAAGATCCATTCCACAGATTATTGCTGCATGGAGTTTGTGAGTTCTACAACTTGGACTCCGTGACTGTTCCCGAGTCGAAGAGTGGTGGCTCTACGAAGATGACTCGAATAACAAGGAAGAAGAAGGCCATGGTTGAGATCCCAAATATAACTCTGACCCATTTTCTGAAAATGTCCAAAGAAGGAACATGGTAA

Protein sequence

MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDKEAKFIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFYNLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFLKMSKEGTW

Homology

[Close]

BLAST of Spg014554 vs. NCBI nr
Match: XP_023515083.1 (R3H domain-containing protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 466.8 bits (1200), Expect = 1.1e-127
Identity = 228/248 (91.94%), Postives = 235/248 (94.76%), Query Frame = 0


Query: 1   MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60
           MASTDVL +EQNRFTFSPLSDP+K D +SRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR
Sbjct: 1   MASTDVLNQEQNRFTFSPLSDPIKGDENSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60

Query: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDKEAKFIGVLEN 120
           LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNA DWDKFRSIDMDKEAK IGVLEN
Sbjct: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKLIGVLEN 120

Query: 121 SSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVL 180
           SS ++KGHIDADKMAFLNAWRRIE RTREALRRSFLP LVE FEECIRSFISD SN++VL
Sbjct: 121 SSARKKGHIDADKMAFLNAWRRIESRTREALRRSFLPGLVESFEECIRSFISDSSNQDVL 180

Query: 181 TLRVQDPFHRLLLHGVCEFYNLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFL 240
           TLRVQDPFHRLLLHGVCEFYNLDS TVPESK  GSTKMTRITRKKKAMVEIPNITLTHFL
Sbjct: 181 TLRVQDPFHRLLLHGVCEFYNLDSATVPESKGAGSTKMTRITRKKKAMVEIPNITLTHFL 240

Query: 241 KMSKEGTW 249
           KMSKEGTW
Sbjct: 241 KMSKEGTW 248

[Close]

BLAST of Spg014554 vs. NCBI nr
Match: XP_038896192.1 (R3H domain-containing protein 4 [Benincasa hispida])

HSP 1 Score: 465.3 bits (1196), Expect = 3.3e-127
Identity = 227/248 (91.53%), Postives = 235/248 (94.76%), Query Frame = 0


Query: 1   MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60
           MASTDVLKRE NRFTFSPL+DPL  D DSR MSIEKKIEFLESLTGKVTNRKSRRWLNDR
Sbjct: 1   MASTDVLKREANRFTFSPLNDPLNGDTDSRSMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60

Query: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDKEAKFIGVLEN 120
           LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDKEAK IGV EN
Sbjct: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDKEAKIIGVFEN 120

Query: 121 SSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVL 180
           SS KRKGHIDADKMAFLNAW RIECRTREALRRSFLPEL+EGFEECIRSFIS+ + ++VL
Sbjct: 121 SSAKRKGHIDADKMAFLNAWHRIECRTREALRRSFLPELIEGFEECIRSFISE-TGKDVL 180

Query: 181 TLRVQDPFHRLLLHGVCEFYNLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFL 240
            LRVQDPFHRLLLHGVCEFYNLDSVTVPESK+GGS KMTRITRKKKAMVE+PNITLTHFL
Sbjct: 181 MLRVQDPFHRLLLHGVCEFYNLDSVTVPESKNGGSIKMTRITRKKKAMVEVPNITLTHFL 240

Query: 241 KMSKEGTW 249
           KMSKEGTW
Sbjct: 241 KMSKEGTW 247

[Close]

BLAST of Spg014554 vs. NCBI nr
Match: XP_022960434.1 (R3H domain-containing protein 4-like [Cucurbita moschata] >KAG6593131.1 R3H domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 464.9 bits (1195), Expect = 4.3e-127
Identity = 227/248 (91.53%), Postives = 234/248 (94.35%), Query Frame = 0


Query: 1   MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60
           MASTDVL +EQNRFTFSPLSDP+K D +SRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR
Sbjct: 1   MASTDVLNQEQNRFTFSPLSDPIKGDENSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60

Query: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDKEAKFIGVLEN 120
           LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNA DWDKFRSIDMDKEAK IGVLEN
Sbjct: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKLIGVLEN 120

Query: 121 SSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVL 180
           SS +R+GHIDADKMAFLNAWRRIE RTREALRRSFLP LVE FEECIRSFISD SN++VL
Sbjct: 121 SSARRRGHIDADKMAFLNAWRRIESRTREALRRSFLPGLVESFEECIRSFISDSSNQDVL 180

Query: 181 TLRVQDPFHRLLLHGVCEFYNLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFL 240
           TLRVQDPFHRLLLHGVCEFYNLDS TVPESK  G TKMTRITRKKKAMVEIPNITLTHFL
Sbjct: 181 TLRVQDPFHRLLLHGVCEFYNLDSATVPESKGSGCTKMTRITRKKKAMVEIPNITLTHFL 240

Query: 241 KMSKEGTW 249
           KMSKEGTW
Sbjct: 241 KMSKEGTW 248

[Close]

BLAST of Spg014554 vs. NCBI nr
Match: XP_023004636.1 (R3H domain-containing protein 4-like [Cucurbita maxima])

HSP 1 Score: 463.0 bits (1190), Expect = 1.6e-126
Identity = 226/248 (91.13%), Postives = 234/248 (94.35%), Query Frame = 0


Query: 1   MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60
           MASTDVL +EQNRFTFSPLSDP+K D +SRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR
Sbjct: 1   MASTDVLNQEQNRFTFSPLSDPIKGDENSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60

Query: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDKEAKFIGVLEN 120
           LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNA DWDKFRSIDMDKEAK IGVL+N
Sbjct: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKLIGVLDN 120

Query: 121 SSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVL 180
           SS +RKGHI+ADKMAFLNAWRRIE RTREALRRSFLP LVE FEECIRSFISD SN++VL
Sbjct: 121 SSARRKGHINADKMAFLNAWRRIESRTREALRRSFLPGLVESFEECIRSFISDSSNQDVL 180

Query: 181 TLRVQDPFHRLLLHGVCEFYNLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFL 240
           TLRVQDPFHRLLLHGVCEFYNLDS TVPESK  G TKMTRITRKKKAMVEIPNITLTHFL
Sbjct: 181 TLRVQDPFHRLLLHGVCEFYNLDSATVPESKGSGCTKMTRITRKKKAMVEIPNITLTHFL 240

Query: 241 KMSKEGTW 249
           KMSKEGTW
Sbjct: 241 KMSKEGTW 248

[Close]

BLAST of Spg014554 vs. NCBI nr
Match: XP_022150187.1 (uncharacterized protein LOC111018421 isoform X1 [Momordica charantia])

HSP 1 Score: 461.5 bits (1186), Expect = 4.7e-126
Identity = 227/248 (91.53%), Postives = 236/248 (95.16%), Query Frame = 0


Query: 1   MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60
           MASTDVLKR +NR TFSPL DP+K DADSRGMSIEKKIEFLESL GKVTNRKSRRWLNDR
Sbjct: 1   MASTDVLKRVENRLTFSPLLDPIKGDADSRGMSIEKKIEFLESLAGKVTNRKSRRWLNDR 60

Query: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDKEAKFIGVLEN 120
           LLMELVPRLNAEE+RGLFAPPPWGDDVRPTTFSMTNA DWDKFRSIDMDKEAK IGVLEN
Sbjct: 61  LLMELVPRLNAEEVRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVLEN 120

Query: 121 SSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVL 180
           SS KRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFE CIRSFISD S ++VL
Sbjct: 121 SSAKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEGCIRSFISDTS-KDVL 180

Query: 181 TLRVQDPFHRLLLHGVCEFYNLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFL 240
           TLRVQDPFHRLLLHGVCEFYNLDSVTVPESK GGSTK+TRI+RKKKAMVEIP+ITL+HFL
Sbjct: 181 TLRVQDPFHRLLLHGVCEFYNLDSVTVPESKGGGSTKVTRISRKKKAMVEIPSITLSHFL 240

Query: 241 KMSKEGTW 249
           KMSKEGTW
Sbjct: 241 KMSKEGTW 247

[Close]

BLAST of Spg014554 vs. ExPASy Swiss-Prot
Match: Q4VBF2 (R3H domain-containing protein 4 OS=Mus musculus OX=10090 GN=R3hdm4 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 5.6e-05
Identity = 35/117 (29.91%), Postives = 59/117 (50.43%), Query Frame = 0


Query: 100 WDKFRSIDMDKEAKFIGVLENSS-------PKRKGHIDADKMAFL--NAWRRIECRTREA 159
           W+ F +   +++ + +  LE+ S       P R      +   F     +RRI  R R  
Sbjct: 115 WNDFMNRSGEEQERVLRYLEDESQGKRRRGPGRGEDRRREDPVFTPHECFRRISRRLRSV 174

Query: 160 LRRSFLP-ELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFYNLDSVT 207
           L+RS +P E +E +EE + +F S  S + V T  + + + RLLLH VC++ +L S +
Sbjct: 175 LKRSRIPMETLESWEERLLAFFS-VSPQAVYTAMLDNSYERLLLHAVCQYMDLISAS 230

[Close]

BLAST of Spg014554 vs. ExPASy Swiss-Prot
Match: Q2KIL7 (R3H domain-containing protein 4 OS=Bos taurus OX=9913 GN=R3HDM4 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 7.3e-05
Identity = 49/177 (27.68%), Postives = 81/177 (45.76%), Query Frame = 0


Query: 44  LTGKVTNRKS-RRWLNDRLLMELVPRLNAE--EIRGLFAPPPWGDDVRPTTFSMTNAGDW 103
           L  K   RKS +R  N + L+ L+    A      G  APP           + T    W
Sbjct: 64  LVPKAKGRKSLQRLENTQYLLTLLETDGATPGPEDGDLAPPAAPGIFAEACSNETYVEIW 123

Query: 104 DKFRSIDMDKEAKFIGVLEN---SSPKRKGHIDADKM-----AFL--NAWRRIECRTREA 163
           + F +   +++ + +  LE+   S  +R+G    +       A+     ++RI  R R  
Sbjct: 124 NDFMNRSGEEQERVLRYLEDEGKSKARRRGPTRGEDRRREDPAYTPRECFQRISRRLRAV 183

Query: 164 LRRSFLP-ELVEGFEECIRSFISDPSNENVLTLRVQDPFHRLLLHGVCEFYNLDSVT 207
           L+RS +P E +E +EE +  F S  S + V T  + + F RLLLH +C++ +L S +
Sbjct: 184 LKRSRIPMETLETWEERLLRFFS-VSPQAVYTAMLDNSFERLLLHAICQYMDLISAS 239

[Close]

BLAST of Spg014554 vs. ExPASy TrEMBL
Match: A0A6J1HB10 (R3H domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111461169 PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.1e-127
Identity = 227/248 (91.53%), Postives = 234/248 (94.35%), Query Frame = 0


Query: 1   MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60
           MASTDVL +EQNRFTFSPLSDP+K D +SRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR
Sbjct: 1   MASTDVLNQEQNRFTFSPLSDPIKGDENSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60

Query: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDKEAKFIGVLEN 120
           LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNA DWDKFRSIDMDKEAK IGVLEN
Sbjct: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKLIGVLEN 120

Query: 121 SSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVL 180
           SS +R+GHIDADKMAFLNAWRRIE RTREALRRSFLP LVE FEECIRSFISD SN++VL
Sbjct: 121 SSARRRGHIDADKMAFLNAWRRIESRTREALRRSFLPGLVESFEECIRSFISDSSNQDVL 180

Query: 181 TLRVQDPFHRLLLHGVCEFYNLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFL 240
           TLRVQDPFHRLLLHGVCEFYNLDS TVPESK  G TKMTRITRKKKAMVEIPNITLTHFL
Sbjct: 181 TLRVQDPFHRLLLHGVCEFYNLDSATVPESKGSGCTKMTRITRKKKAMVEIPNITLTHFL 240

Query: 241 KMSKEGTW 249
           KMSKEGTW
Sbjct: 241 KMSKEGTW 248

[Close]

BLAST of Spg014554 vs. ExPASy TrEMBL
Match: A0A6J1KSN3 (R3H domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111497870 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 7.9e-127
Identity = 226/248 (91.13%), Postives = 234/248 (94.35%), Query Frame = 0


Query: 1   MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60
           MASTDVL +EQNRFTFSPLSDP+K D +SRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR
Sbjct: 1   MASTDVLNQEQNRFTFSPLSDPIKGDENSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60

Query: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDKEAKFIGVLEN 120
           LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNA DWDKFRSIDMDKEAK IGVL+N
Sbjct: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKLIGVLDN 120

Query: 121 SSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVL 180
           SS +RKGHI+ADKMAFLNAWRRIE RTREALRRSFLP LVE FEECIRSFISD SN++VL
Sbjct: 121 SSARRKGHINADKMAFLNAWRRIESRTREALRRSFLPGLVESFEECIRSFISDSSNQDVL 180

Query: 181 TLRVQDPFHRLLLHGVCEFYNLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFL 240
           TLRVQDPFHRLLLHGVCEFYNLDS TVPESK  G TKMTRITRKKKAMVEIPNITLTHFL
Sbjct: 181 TLRVQDPFHRLLLHGVCEFYNLDSATVPESKGSGCTKMTRITRKKKAMVEIPNITLTHFL 240

Query: 241 KMSKEGTW 249
           KMSKEGTW
Sbjct: 241 KMSKEGTW 248

[Close]

BLAST of Spg014554 vs. ExPASy TrEMBL
Match: A0A6J1DA21 (uncharacterized protein LOC111018421 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018421 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 2.3e-126
Identity = 227/248 (91.53%), Postives = 236/248 (95.16%), Query Frame = 0


Query: 1   MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60
           MASTDVLKR +NR TFSPL DP+K DADSRGMSIEKKIEFLESL GKVTNRKSRRWLNDR
Sbjct: 1   MASTDVLKRVENRLTFSPLLDPIKGDADSRGMSIEKKIEFLESLAGKVTNRKSRRWLNDR 60

Query: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDKEAKFIGVLEN 120
           LLMELVPRLNAEE+RGLFAPPPWGDDVRPTTFSMTNA DWDKFRSIDMDKEAK IGVLEN
Sbjct: 61  LLMELVPRLNAEEVRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVLEN 120

Query: 121 SSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVL 180
           SS KRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFE CIRSFISD S ++VL
Sbjct: 121 SSAKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEGCIRSFISDTS-KDVL 180

Query: 181 TLRVQDPFHRLLLHGVCEFYNLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFL 240
           TLRVQDPFHRLLLHGVCEFYNLDSVTVPESK GGSTK+TRI+RKKKAMVEIP+ITL+HFL
Sbjct: 181 TLRVQDPFHRLLLHGVCEFYNLDSVTVPESKGGGSTKVTRISRKKKAMVEIPSITLSHFL 240

Query: 241 KMSKEGTW 249
           KMSKEGTW
Sbjct: 241 KMSKEGTW 247

[Close]

BLAST of Spg014554 vs. ExPASy TrEMBL
Match: A0A0A0K5V5 (R3H-assoc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G393440 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.2e-124
Identity = 222/248 (89.52%), Postives = 229/248 (92.34%), Query Frame = 0


Query: 1   MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60
           MAS DVL+RE NRF FSPL+DPL  D DSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR
Sbjct: 1   MASIDVLEREGNRFPFSPLNDPLNGDTDSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60

Query: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDKEAKFIGVLEN 120
           LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNA DWDKFRSIDMDKEAK IGV EN
Sbjct: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAEDWDKFRSIDMDKEAKIIGVFEN 120

Query: 121 SSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVL 180
           SS KRKGHIDADKMAFLNAWRRIECRTREALRRSF  ELVEG+EECIRSFISD   E+VL
Sbjct: 121 SSAKRKGHIDADKMAFLNAWRRIECRTREALRRSFRVELVEGYEECIRSFISDTCKEDVL 180

Query: 181 TLRVQDPFHRLLLHGVCEFYNLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFL 240
            +RVQDPFHRLLLHGVCEFYNLDSVTV ESK+ GS KMTRITRKKKAMVE+PNITLTHFL
Sbjct: 181 IMRVQDPFHRLLLHGVCEFYNLDSVTVLESKNSGSMKMTRITRKKKAMVEVPNITLTHFL 240

Query: 241 KMSKEGTW 249
           KMSKEGTW
Sbjct: 241 KMSKEGTW 248

[Close]

BLAST of Spg014554 vs. ExPASy TrEMBL
Match: A0A6J1GN38 (uncharacterized protein LOC111456018 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456018 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.8e-123
Identity = 220/248 (88.71%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MASTDVLKREQNRFTFSPLSDPLKDDADSRGMSIEKKIEFLESLTGKVTNRKSRRWLNDR 60
           MASTDVLKR++NRFTF  LSDPLK D DSR MSIEKKIEFLESLTGKVTNRK+RRWLNDR
Sbjct: 1   MASTDVLKRQENRFTFPSLSDPLKGDMDSRDMSIEKKIEFLESLTGKVTNRKTRRWLNDR 60

Query: 61  LLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDKEAKFIGVLEN 120
           LLMELVPRLNAEEIRGLFAPPPWGD+VRPTTFS TNAGDWDKFRSIDMDKEAKFIGVLEN
Sbjct: 61  LLMELVPRLNAEEIRGLFAPPPWGDNVRPTTFSTTNAGDWDKFRSIDMDKEAKFIGVLEN 120

Query: 121 SSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENVL 180
           SS KRKGHIDADK+AFLNAWRRIEC+TREALRRSFLPELVE FE  IRSF+ D S E+VL
Sbjct: 121 SSIKRKGHIDADKVAFLNAWRRIECQTREALRRSFLPELVEAFENSIRSFVLDSSKEDVL 180

Query: 181 TLRVQDPFHRLLLHGVCEFYNLDSVTVPESKSGGSTKMTRITRKKKAMVEIPNITLTHFL 240
           TLRV+DPF RLLLHGVCEFYNLDSVTVPE K+G STKMTR+TRKKKA+VEIPNITLTHFL
Sbjct: 181 TLRVRDPFRRLLLHGVCEFYNLDSVTVPELKNGSSTKMTRVTRKKKALVEIPNITLTHFL 240

Query: 241 KMSKEGTW 249
           KMSKEGTW
Sbjct: 241 KMSKEGTW 248

[Close]

BLAST of Spg014554 vs. TAIR 10
Match: AT1G03250.1 (unknown protein; Has 89 Blast hits to 89 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 314.3 bits (804), Expect = 8.7e-86
Identity = 155/250 (62.00%), Postives = 192/250 (76.80%), Query Frame = 0


Query: 1   MASTDVLKREQNRFTFSPLSDPLKDDAD-SRGMSIEKKIEFLESLTGKVTNRKSRRWLND 60
           MA+T+V++R++     S L DP + D   SRG+S+EKKIE LESL G+V+NR+SRRWLND
Sbjct: 1   MAATNVMRRDE-----SLLIDPQRGDTSVSRGLSLEKKIEALESLAGQVSNRRSRRWLND 60

Query: 61  RLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDKEAKFIGVLE 120
           R+LMELVPRL+A+EIRGLFAPPPWGDDV P+ FS+TN G+WDKFR+IDMDKEA  +  L 
Sbjct: 61  RILMELVPRLDAQEIRGLFAPPPWGDDVPPSAFSLTNVGEWDKFRNIDMDKEANIMDSLN 120

Query: 121 NSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISDPSNENV 180
            SS ++KG +D DK+A LNAWRRI+CRTR+ALRRSFLPEL+EG+E CI  FI +    +V
Sbjct: 121 RSSVRQKGSVDGDKIAVLNAWRRIDCRTRDALRRSFLPELIEGYESCISHFIEEGGEGDV 180

Query: 181 LTLRVQDPFHRLLLHGVCEFYNLDSVTVPESKSGGSTKMTRITRKKKA-MVEIPNITLTH 240
           L L+VQDPFHRLLLHGVCE++NL S T  E     + K T I  KK     E P+I+L H
Sbjct: 181 LELKVQDPFHRLLLHGVCEYHNLVSTTATEQIGRIAMKTTSIKWKKSGDSGEKPSISLAH 240

Query: 241 FLKMSKEGTW 249
           FL+MSKEG W
Sbjct: 241 FLRMSKEGAW 245

[Close]

BLAST of Spg014554 vs. TAIR 10
Match: AT1G03250.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. )

HSP 1 Score: 307.8 bits (787), Expect = 8.1e-84
Identity = 155/256 (60.55%), Postives = 192/256 (75.00%), Query Frame = 0


Query: 1   MASTDVLKREQNRFTFSPLSDPLKDDAD-SRGMSIEKKIEFLESLTGKVTNRKSRRWLND 60
           MA+T+V++R++     S L DP + D   SRG+S+EKKIE LESL G+V+NR+SRRWLND
Sbjct: 1   MAATNVMRRDE-----SLLIDPQRGDTSVSRGLSLEKKIEALESLAGQVSNRRSRRWLND 60

Query: 61  RLLMELVPRLNAEEIRGLFAPPPWGDDVRPTTFSMTNAGDWDKFRSIDMDKE------AK 120
           R+LMELVPRL+A+EIRGLFAPPPWGDDV P+ FS+TN G+WDKFR+IDMDKE      A 
Sbjct: 61  RILMELVPRLDAQEIRGLFAPPPWGDDVPPSAFSLTNVGEWDKFRNIDMDKEELCFFQAN 120

Query: 121 FIGVLENSSPKRKGHIDADKMAFLNAWRRIECRTREALRRSFLPELVEGFEECIRSFISD 180
            +  L  SS ++KG +D DK+A LNAWRRI+CRTR+ALRRSFLPEL+EG+E CI  FI +
Sbjct: 121 IMDSLNRSSVRQKGSVDGDKIAVLNAWRRIDCRTRDALRRSFLPELIEGYESCISHFIEE 180

Query: 181 PSNENVLTLRVQDPFHRLLLHGVCEFYNLDSVTVPESKSGGSTKMTRITRKKKA-MVEIP 240
               +VL L+VQDPFHRLLLHGVCE++NL S T  E     + K T I  KK     E P
Sbjct: 181 GGEGDVLELKVQDPFHRLLLHGVCEYHNLVSTTATEQIGRIAMKTTSIKWKKSGDSGEKP 240

Query: 241 NITLTHFLKMSKEGTW 249
           +I+L HFL+MSKEG W
Sbjct: 241 SISLAHFLRMSKEGAW 251

The following BLAST results are available for this feature:

BLAST of Spg014554 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515083.1	1.1e-127	91.94	R3H domain-containing protein 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_038896192.1	3.3e-127	91.53	R3H domain-containing protein 4 [Benincasa hispida]	[more]
XP_022960434.1	4.3e-127	91.53	R3H domain-containing protein 4-like [Cucurbita moschata] >KAG6593131.1 R3H doma...	[more]
XP_023004636.1	1.6e-126	91.13	R3H domain-containing protein 4-like [Cucurbita maxima]	[more]
XP_022150187.1	4.7e-126	91.53	uncharacterized protein LOC111018421 isoform X1 [Momordica charantia]	[more]

BLAST of Spg014554 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VBF2	5.6e-05	29.91	R3H domain-containing protein 4 OS=Mus musculus OX=10090 GN=R3hdm4 PE=2 SV=1	[more]
Q2KIL7	7.3e-05	27.68	R3H domain-containing protein 4 OS=Bos taurus OX=9913 GN=R3HDM4 PE=2 SV=1	[more]

BLAST of Spg014554 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HB10	2.1e-127	91.53	R3H domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]
A0A6J1KSN3	7.9e-127	91.13	R3H domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111497870...	[more]
A0A6J1DA21	2.3e-126	91.53	uncharacterized protein LOC111018421 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0K5V5	6.2e-124	89.52	R3H-assoc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G393440 P...	[more]
A0A6J1GN38	1.8e-123	88.71	uncharacterized protein LOC111456018 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Spg014554 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03250.1	8.7e-86	62.00	unknown protein; Has 89 Blast hits to 89 proteins in 31 species: Archae - 0; Bac...	[more]
AT1G03250.2	8.1e-84	60.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025952	R3H-associated N-terminal domain	PFAM	PF13902	R3H-assoc	coord: 33..153 e-value: 1.3E-27 score: 96.8
IPR036867	R3H domain superfamily	GENE3D	3.30.1370.50		coord: 148..247 e-value: 4.5E-8 score: 34.8
IPR036867	R3H domain superfamily	SUPERFAMILY	82708	R3H domain	coord: 140..239
IPR039629	R3H domain-containing protein 4	PANTHER	PTHR32019	R3H DOMAIN-CONTAINING PROTEIN 4	coord: 4..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg014554.1	Spg014554.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003676	nucleic acid binding