Spg014497 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg014497
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribosome biogenesis NEP1-like protein
Location	scaffold3: 41434039 .. 41435260 (-)
RNA-Seq Expression	Spg014497
Synteny	Spg014497

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCAGGGAAGAATCCATTACGATTGGAAGAAATGGCTTTCAGACACTCTCTCACAGTGAGCCCCGTCGCTTCAACCCTCTCTTCTTTTCTTCTGTTTTTGTACGAATATAATTTATTAATATAATATATATATATATGGGCATGCAGAACGTTTGCAGATCAATGCTCGTCGGAACTAGGATCGACGGGAAACGTCTAGCGTCGTCGACCACCGCTCAGGCCGCCACGCACTCTCATGCTGCTGCTGCTGCTTCTTCTAAGTTAACAAACAAAACCATACCTATTGTATAATATTTGCTTTCTTGTCGGTCAATTTAATTATATCAATACTTTAACAGGAGCAGCGAGTACATGAAGGGCGAGTACGCTCCAATCTACATTGTGTTTGGAATGGTGGCGGTTGCCGTGTCGATCGCAACCCACACGGCGAAGCAGCAGCTGATGCATTCGCCGGTGGTCAACCTGAGCAAGAAGAAGAGGGAGAGCATTTCGGAGGTGGATGATCCCGACACCGTGATCTCTTCTGCCGACAAGTTCGTCAACAAATCCTTTCTTAGGAAGGTGGCCCACGTCCAGGATGACAACAAAACGCTAAAGGACCCCGTCCACCCGGATCCTTTTACCCGGTTCAATTCTCTCATCAATAAATATCATCCTCAATTTCAAATTGTTATTATAATCATAATTTAATATAATATGTATATGTTGTTGCTTGCTTTGCAGGCCACGTAATGCCGAAACTCTGAAAACTGCTGGAGTGGATCCTACCCGTCGTTAGAACATAGACTCATATATTATTCAATGAGATTGTCACACTGAAGCTATTAGTTTTTTTCACTCTTGGATACAAGAGAGAAATTGTAGAAGTATATCCATTTTGTATCCAGCGAATTAAAGAGATAGCACGTTGTGATAGGTCCCATAGAATAATTTGTCCTTTTTATTGTGTGTTTTCGTTTGTTGGTTATGTTTAATTTCTGATTCGCAACAATGTGTATGTATATAATTGGTCCTTCTGGTTTTTGGTTGTGCTTCTCTTCCCTTTCTGGTATGAGGTGAAGTAACTACTATCTACTAGACATGTGGCCCTCGTTTAATTAATTGTTTTTTTCTTTTTACATATAATAAAAGTTATTGGATACATAAAAGTGAGGCTGAGGCTTAACAGTAATTGACATGTACCCTCGTAGGTTCGAATCCCCACCTCATGTTGTTGAACTCC

mRNA sequence

ATGGCTTTCAGACACTCTCTCACAAACGTTTGCAGATCAATGCTCGTCGGAACTAGGATCGACGGGAAACGTCTAGCGTCGTCGACCACCGCTCAGGCCGCCACGCACTCTCATGCTGCTGCTGCTGCTTCTTCTAAGAGCAGCGAGTACATGAAGGGCGAGTACGCTCCAATCTACATTGTGTTTGGAATGGTGGCGGTTGCCGTGTCGATCGCAACCCACACGGCGAAGCAGCAGCTGATGCATTCGCCGGTGGTCAACCTGAGCAAGAAGAAGAGGGAGAGCATTTCGGAGGTGGATGATCCCGACACCGTGATCTCTTCTGCCGACAAGTTCGTCAACAAATCCTTTCTTAGGAAGGTGGCCCACGTCCAGGATGACAACAAAACGCTAAAGGACCCCGTCCACCCGGATCCTTTTACCCGGCCACGTAATGCCGAAACTCTGAAAACTGCTGGAGTGGATCCTACCCGTCGTTAG

Coding sequence (CDS)

ATGGCTTTCAGACACTCTCTCACAAACGTTTGCAGATCAATGCTCGTCGGAACTAGGATCGACGGGAAACGTCTAGCGTCGTCGACCACCGCTCAGGCCGCCACGCACTCTCATGCTGCTGCTGCTGCTTCTTCTAAGAGCAGCGAGTACATGAAGGGCGAGTACGCTCCAATCTACATTGTGTTTGGAATGGTGGCGGTTGCCGTGTCGATCGCAACCCACACGGCGAAGCAGCAGCTGATGCATTCGCCGGTGGTCAACCTGAGCAAGAAGAAGAGGGAGAGCATTTCGGAGGTGGATGATCCCGACACCGTGATCTCTTCTGCCGACAAGTTCGTCAACAAATCCTTTCTTAGGAAGGTGGCCCACGTCCAGGATGACAACAAAACGCTAAAGGACCCCGTCCACCCGGATCCTTTTACCCGGCCACGTAATGCCGAAACTCTGAAAACTGCTGGAGTGGATCCTACCCGTCGTTAG

Protein sequence

MAFRHSLTNVCRSMLVGTRIDGKRLASSTTAQAATHSHAAAAASSKSSEYMKGEYAPIYIVFGMVAVAVSIATHTAKQQLMHSPVVNLSKKKRESISEVDDPDTVISSADKFVNKSFLRKVAHVQDDNKTLKDPVHPDPFTRPRNAETLKTAGVDPTRR

Homology

[Close]

BLAST of Spg014497 vs. NCBI nr
Match: XP_038906484.1 (uncharacterized protein LOC120092464 [Benincasa hispida])

HSP 1 Score: 224.6 bits (571), Expect = 6.2e-55
Identity = 126/168 (75.00%), Postives = 141/168 (83.93%), Query Frame = 0


Query: 3   FRHSLTN-VCRSMLVGTRIDGK-RLASSTTAQAATHSHAAAAAS---------SKSSEYM 62
           F  SLTN V ++MLVG+RI GK RLASSTTA AA +   A+++S         S SSEYM
Sbjct: 4   FTTSLTNKVWKAMLVGSRIQGKRRLASSTTAPAANNIQKASSSSSSSSSSKGGSSSSEYM 63

Query: 63  KGEYAPIYIVFGMVAVAVSIATHTAKQQLMHSPVVNLSKKKRESISEVDDPDTVISSADK 122
           KGEYAPIYIV GMVAVAVSI THTAKQQL+HSPVVN SKKKRESI EVDDPDT+I+SA+K
Sbjct: 64  KGEYAPIYIVVGMVAVAVSIGTHTAKQQLLHSPVVNFSKKKRESIPEVDDPDTIINSANK 123

Query: 123 FVNKSFLRKVAHVQDDNKTLKDPVHPDPFTRPRNAETLKTAGVDPTRR 160
           F+NKSFLRKVAH+Q+D KTL DPVHP+PFTRPRNAETLKTAGVDPTRR
Sbjct: 124 FINKSFLRKVAHIQEDTKTLPDPVHPNPFTRPRNAETLKTAGVDPTRR 171

[Close]

BLAST of Spg014497 vs. NCBI nr
Match: XP_008459927.1 (PREDICTED: uncharacterized protein LOC103498899 [Cucumis melo])

HSP 1 Score: 222.2 bits (565), Expect = 3.1e-54
Identity = 124/162 (76.54%), Postives = 139/162 (85.80%), Query Frame = 0


Query: 3   FRHSLTN-VCRSMLVGTRIDG-KRLASSTTAQAATHSHAAAAAS---SKSSEYMKGEYAP 62
           FR SL N + +SMLVGTRI G +R ASSTTA +A  S +++++S   S  SEYMKGEYAP
Sbjct: 4   FRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGEYAP 63

Query: 63  IYIVFGMVAVAVSIATHTAKQQLMHSPVVNLSKKKRESISEVDDPDTVISSADKFVNKSF 122
           IYIV GMVAV VSIATHTAKQQL+HSP+VN SKKKRESI EV+DPDTVI+SADKF+NKSF
Sbjct: 64  IYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSF 123

Query: 123 LRKVAHVQDDNKTLKDPVHPDPFTRPRNAETLKTAGVDPTRR 160
           LRKVAH+QDD KTL DPVH DPFTRPRNAETLKTAGVDPTRR
Sbjct: 124 LRKVAHIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPTRR 165

[Close]

BLAST of Spg014497 vs. NCBI nr
Match: KAA0039866.1 (putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa] >TYK24635.1 putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 222.2 bits (565), Expect = 3.1e-54
Identity = 120/151 (79.47%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 14  MLVGTRIDG-KRLASSTTAQAATHSHAAAAASSK----SSEYMKGEYAPIYIVFGMVAVA 73
           MLVGTRI G +R ASSTTA +A  S +++++SSK     SEYMKGEYAPIYIV GMVAV 
Sbjct: 1   MLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVV 60

Query: 74  VSIATHTAKQQLMHSPVVNLSKKKRESISEVDDPDTVISSADKFVNKSFLRKVAHVQDDN 133
           VSIATHTAKQQL+HSP+VN SKKKRESI EV+DPDTVI+SADKF+NKSFLRKVAH+QDD 
Sbjct: 61  VSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDT 120

Query: 134 KTLKDPVHPDPFTRPRNAETLKTAGVDPTRR 160
           KTL DPVHPDPFTRPRNAETLKTAGVDPTRR
Sbjct: 121 KTLPDPVHPDPFTRPRNAETLKTAGVDPTRR 151

[Close]

BLAST of Spg014497 vs. NCBI nr
Match: XP_004140656.2 (uncharacterized protein LOC101206372 [Cucumis sativus] >KGN46404.1 hypothetical protein Csa_005593 [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 7.6e-53
Identity = 121/165 (73.33%), Postives = 136/165 (82.42%), Query Frame = 0


Query: 3   FRHSLTN-VCRSMLVGTRIDG-KRLASSTTAQAATHSHAAAAASSKS------SEYMKGE 62
           FR SL N + +SMLV TRI G +R +SSTT  +A +   A++ SS S      SEYMKGE
Sbjct: 4   FRTSLANKMWKSMLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYMKGE 63

Query: 63  YAPIYIVFGMVAVAVSIATHTAKQQLMHSPVVNLSKKKRESISEVDDPDTVISSADKFVN 122
           YAPIYIV GMVAV VSIATHTAKQQL+HSP+VN SKKKRESI EV+DPDTVI+SADKF+N
Sbjct: 64  YAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFIN 123

Query: 123 KSFLRKVAHVQDDNKTLKDPVHPDPFTRPRNAETLKTAGVDPTRR 160
           KSFLRKVAH+Q D KTL DPVHPDPFTRPRNAETLKTAG+DPTRR
Sbjct: 124 KSFLRKVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR 168

[Close]

BLAST of Spg014497 vs. NCBI nr
Match: ADN33694.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 216.1 bits (549), Expect = 2.2e-52
Identity = 118/150 (78.67%), Postives = 131/150 (87.33%), Query Frame = 0


Query: 14  MLVGTRIDG-KRLASSTTAQAATHSHAAAAAS---SKSSEYMKGEYAPIYIVFGMVAVAV 73
           MLVGTRI G +R ASSTTA +A  S +++++S   S  SEYMKGEYAPIYIV GMVAV V
Sbjct: 1   MLVGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGEYAPIYIVMGMVAVVV 60

Query: 74  SIATHTAKQQLMHSPVVNLSKKKRESISEVDDPDTVISSADKFVNKSFLRKVAHVQDDNK 133
           SIATHTAKQQL+HSP+VN SKKKRESI EV+DPDTVI+SADKF+NKSFLRKVAH+QDD K
Sbjct: 61  SIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTK 120

Query: 134 TLKDPVHPDPFTRPRNAETLKTAGVDPTRR 160
           TL DPVH DPFTRPRNAETLKTAGVDPTRR
Sbjct: 121 TLPDPVHLDPFTRPRNAETLKTAGVDPTRR 150

[Close]

BLAST of Spg014497 vs. ExPASy TrEMBL
Match: A0A5D3DLZ1 (Putative Ribosome biogenesis protein NEP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001820 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.5e-54
Identity = 120/151 (79.47%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 14  MLVGTRIDG-KRLASSTTAQAATHSHAAAAASSK----SSEYMKGEYAPIYIVFGMVAVA 73
           MLVGTRI G +R ASSTTA +A  S +++++SSK     SEYMKGEYAPIYIV GMVAV 
Sbjct: 1   MLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVV 60

Query: 74  VSIATHTAKQQLMHSPVVNLSKKKRESISEVDDPDTVISSADKFVNKSFLRKVAHVQDDN 133
           VSIATHTAKQQL+HSP+VN SKKKRESI EV+DPDTVI+SADKF+NKSFLRKVAH+QDD 
Sbjct: 61  VSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDT 120

Query: 134 KTLKDPVHPDPFTRPRNAETLKTAGVDPTRR 160
           KTL DPVHPDPFTRPRNAETLKTAGVDPTRR
Sbjct: 121 KTLPDPVHPDPFTRPRNAETLKTAGVDPTRR 151

[Close]

BLAST of Spg014497 vs. ExPASy TrEMBL
Match: A0A1S3CBE5 (uncharacterized protein LOC103498899 OS=Cucumis melo OX=3656 GN=LOC103498899 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.5e-54
Identity = 124/162 (76.54%), Postives = 139/162 (85.80%), Query Frame = 0


Query: 3   FRHSLTN-VCRSMLVGTRIDG-KRLASSTTAQAATHSHAAAAAS---SKSSEYMKGEYAP 62
           FR SL N + +SMLVGTRI G +R ASSTTA +A  S +++++S   S  SEYMKGEYAP
Sbjct: 4   FRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGEYAP 63

Query: 63  IYIVFGMVAVAVSIATHTAKQQLMHSPVVNLSKKKRESISEVDDPDTVISSADKFVNKSF 122
           IYIV GMVAV VSIATHTAKQQL+HSP+VN SKKKRESI EV+DPDTVI+SADKF+NKSF
Sbjct: 64  IYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSF 123

Query: 123 LRKVAHVQDDNKTLKDPVHPDPFTRPRNAETLKTAGVDPTRR 160
           LRKVAH+QDD KTL DPVH DPFTRPRNAETLKTAGVDPTRR
Sbjct: 124 LRKVAHIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPTRR 165

[Close]

BLAST of Spg014497 vs. ExPASy TrEMBL
Match: A0A0A0KC39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091280 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.7e-53
Identity = 121/165 (73.33%), Postives = 136/165 (82.42%), Query Frame = 0


Query: 3   FRHSLTN-VCRSMLVGTRIDG-KRLASSTTAQAATHSHAAAAASSKS------SEYMKGE 62
           FR SL N + +SMLV TRI G +R +SSTT  +A +   A++ SS S      SEYMKGE
Sbjct: 4   FRTSLANKMWKSMLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYMKGE 63

Query: 63  YAPIYIVFGMVAVAVSIATHTAKQQLMHSPVVNLSKKKRESISEVDDPDTVISSADKFVN 122
           YAPIYIV GMVAV VSIATHTAKQQL+HSP+VN SKKKRESI EV+DPDTVI+SADKF+N
Sbjct: 64  YAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFIN 123

Query: 123 KSFLRKVAHVQDDNKTLKDPVHPDPFTRPRNAETLKTAGVDPTRR 160
           KSFLRKVAH+Q D KTL DPVHPDPFTRPRNAETLKTAG+DPTRR
Sbjct: 124 KSFLRKVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR 168

[Close]

BLAST of Spg014497 vs. ExPASy TrEMBL
Match: E5GB52 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.1e-52
Identity = 118/150 (78.67%), Postives = 131/150 (87.33%), Query Frame = 0


Query: 14  MLVGTRIDG-KRLASSTTAQAATHSHAAAAAS---SKSSEYMKGEYAPIYIVFGMVAVAV 73
           MLVGTRI G +R ASSTTA +A  S +++++S   S  SEYMKGEYAPIYIV GMVAV V
Sbjct: 1   MLVGTRIQGNRRFASSTTAPSANASSSSSSSSKGGSGGSEYMKGEYAPIYIVMGMVAVVV 60

Query: 74  SIATHTAKQQLMHSPVVNLSKKKRESISEVDDPDTVISSADKFVNKSFLRKVAHVQDDNK 133
           SIATHTAKQQL+HSP+VN SKKKRESI EV+DPDTVI+SADKF+NKSFLRKVAH+QDD K
Sbjct: 61  SIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTK 120

Query: 134 TLKDPVHPDPFTRPRNAETLKTAGVDPTRR 160
           TL DPVH DPFTRPRNAETLKTAGVDPTRR
Sbjct: 121 TLPDPVHLDPFTRPRNAETLKTAGVDPTRR 150

[Close]

BLAST of Spg014497 vs. ExPASy TrEMBL
Match: A0A6J1D5I0 (uncharacterized protein LOC111017496 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017496 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.3e-52
Identity = 121/160 (75.62%), Postives = 133/160 (83.12%), Query Frame = 0


Query: 1   MAFRHSLTNVCRSMLVG--TRIDGKR-LASSTTAQAATHSHAAAAASSKSSEYMKGEYAP 60
           MAFR   T + +SMLVG  +RI+GKR  ASSTT         A+++SS  SEYMKGEYAP
Sbjct: 1   MAFRR--TKLWKSMLVGIPSRIEGKRCFASSTT---------ASSSSSSKSEYMKGEYAP 60

Query: 61  IYIVFGMVAVAVSIATHTAKQQLMHSPVVNLSKKKRESISEVDDPDTVISSADKFVNKSF 120
           IYIV GMV VAV+I THTAKQQL+HSPVV LSKKKRESI EVDDPDTVI+SADKFVNKSF
Sbjct: 61  IYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSF 120

Query: 121 LRKVAHVQDDNKTLKDPVHPDPFTRPRNAETLKTAGVDPT 158
           LRKVAH+QD NKTL+DP HPDPFTRPRNAETLKTAGVDPT
Sbjct: 121 LRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT 149

[Close]

BLAST of Spg014497 vs. TAIR 10
Match: AT1G63060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07330.1); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 122.9 bits (307), Expect = 2.4e-28
Identity = 73/157 (46.50%), Postives = 103/157 (65.61%), Query Frame = 0


Query: 1   MAFRHSLTNVCRSMLVGTRIDGKRLASSTTAQAATHSHAAAAASSKSSEYMKGEYAPIYI 60
           MAFR  +T+  R   VG +  G R  ++T A  A  ++      +K S  + GE+AP+ I
Sbjct: 1   MAFR--ITSQLRP--VGNQFGGSRRFATTVADGAKQTY------NKFS--IMGEFAPVAI 60

Query: 61  VFGMVAVAVSIATHTAKQQLMHSPVVNLSKKKRESISEVDDPDTVISSADKFVNKSFLRK 120
           + G V +AV +A H+ KQQLMH+P ++  K +R +++EVDDP+  +SSADKF+NKS+LRK
Sbjct: 61  IGGFVGLAVLMAGHSLKQQLMHAPAISTRKNRRAAVAEVDDPENCVSSADKFINKSWLRK 120

Query: 121 VAHVQDDNKT-LKDPVHPDPFTRPRNAETLKTAGVDP 157
           V  +QD +K  L DP  P+PFT PRNAETL + GV P
Sbjct: 121 VGQIQDKSKAILSDPTRPNPFTTPRNAETLNSVGVAP 145

[Close]

BLAST of Spg014497 vs. TAIR 10
Match: AT5G07330.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 92.4 bits (228), Expect = 3.4e-19
Identity = 51/144 (35.42%), Postives = 87/144 (60.42%), Query Frame = 0


Query: 23  KRLASSTTAQAATHSHAAAAASSK--------SSEYMKGEYAPIYIVFGMVAVAVSIATH 82
           +RL + T A     S A + A+++        ++   KG++ P+Y+  G+++++V+   +
Sbjct: 14  QRLRTYTKATTVPRSKAYSTAATEYGGQRTATTAAATKGDFTPVYVSIGLISLSVTFGVY 73

Query: 83  TAKQQLMHSPVVNLSKKKRESISEVDDPDTVISSADKFVNKSFLRKVAHVQDDNK--TLK 142
           TA   L  +P V ++KK RE++ E++DPD V++ AD+F N+S+ RK+AHVQ+ +K   + 
Sbjct: 74  TAYLHLHENPGVRVNKKMRETVPEIEDPDRVLNEADRFANRSWFRKIAHVQEFDKQDVIS 133

Query: 143 DPVHPDPFTRPRNAETLKTAGVDP 157
           DP+  D F     A TLK  GVDP
Sbjct: 134 DPIRKDQFAHKPRALTLKDVGVDP 157

The following BLAST results are available for this feature:

BLAST of Spg014497 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906484.1	6.2e-55	75.00	uncharacterized protein LOC120092464 [Benincasa hispida]	[more]
XP_008459927.1	3.1e-54	76.54	PREDICTED: uncharacterized protein LOC103498899 [Cucumis melo]	[more]
KAA0039866.1	3.1e-54	79.47	putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa] >TYK24...	[more]
XP_004140656.2	7.6e-53	73.33	uncharacterized protein LOC101206372 [Cucumis sativus] >KGN46404.1 hypothetical ...	[more]
ADN33694.1	2.2e-52	78.67	hypothetical protein [Cucumis melo subsp. melo]	[more]

BLAST of Spg014497 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg014497 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DLZ1	1.5e-54	79.47	Putative Ribosome biogenesis protein NEP1-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CBE5	1.5e-54	76.54	uncharacterized protein LOC103498899 OS=Cucumis melo OX=3656 GN=LOC103498899 PE=...	[more]
A0A0A0KC39	3.7e-53	73.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091280 PE=4 SV=1	[more]
E5GB52	1.1e-52	78.67	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A6J1D5I0	5.3e-52	75.63	uncharacterized protein LOC111017496 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Spg014497 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63060.1	2.4e-28	46.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G07330.1	3.4e-19	35.42	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..140
None	No IPR available	PANTHER	PTHR33919	OS09G0127700 PROTEIN	coord: 1..157
None	No IPR available	PANTHER	PTHR33919:SF9	RIBOSOME BIOGENESIS NEP1-LIKE PROTEIN	coord: 1..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg014497.1	Spg014497.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane