Spg014416 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg014416
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPAP_fibrillin domain-containing protein
Locationscaffold3: 48521293 .. 48526783 (+)
RNA-Seq ExpressionSpg014416
SyntenySpg014416
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGAGGCCCAGCTGAAACAGCCGATTATGATCATAATTGAACCTTTGATTGTGTGTTCAAGGCTGATATCGCCCCTTTGTTGTTGGTGGTTTGCTCTCTCTTTCACCCAAAATAGCTCTAGAATTGGGCCTTTTATCAGTGTCATTATCATGGCTCCTCCAACTGTTGCTATGGTTCCCACCAACTTGGCTTGGCTTCTGATGCTTTTGATTTTTACCTTCTCGAGCCTGAAAAAGTATGTGTTGGATTTTAGGAACTTCAATTCATGTTTTAGAGAGGGAGAGATTGGGTTTGGACTGTGTGGTTTGGTGACCAAAAATGGATGTGCTTATTTACTACCTGAGGATCCAAGCCATTACAAAGGTTATGGCAGGGAGAATATTTCCTAAACAGTGCCTCCTAGATCATCGTACACATCAATGATGTTCATCATAAAGATCTTTCATATCCTCCTCCAGGTAGTCCTCTCCAATGCCTGTTTTTTATCGAGATAAAGTACGTGTTAGTAACCTAATTAAGTTCAGCAGTCTATGAAATTAACAAGTTCTAATAGTGTTCATATGTTATTAAATTTGATATATGTTATTAACTTAATTTTTGAAAATAGAGAAGAAGGTAGTTATTATTGGTTTTGCAATAGCCTGGTCTTGTTTTTTGAATTTTGGTTTGATTTTTATCACAGGATGACTTCATCTTTTACAAATGAGACTTCTGAACAAAGTCATACCCCTAATCTAGGTACGAGTAGTAAAGTAGGATTGTTAGGGAAAAGGAAACCTACTAAACCAGCTTCAGATGCTTGGGAACATTTTATTAGAGTAGAGGGATGTGATCCTAAATATCCTAGGGCTGCTTGTAAATATTGTGGAGCTACATATGCTTGTGACTCTAAGAGAAATGGGACAACAAATATGAAAAGACACTTAGAAAAATGTAAGAAGTATACAAGTAAGTCAGAGGATTATGTTGAAGGAGAGGGGGATTCTGAAAGTAACTTGACAGCTGTATCGTTCACTCAAGAGAATTGTAGAATGATGCTTGCTTACATGGTCATATTAGATGAATTGCCCTTTAAGTTTGTAGAAAGCGAAGGATTTCATAAATTTTGCAGGGCATTAAATCCTAAGTTTGTAATTCCATCACGAGTCACTATTGCAAAAGATTGTTTTCAATTGTACATGAGGGAGAAAAAGAGGTTGAAAAGTGTCTTGACTCGAAATGGCCAAAGAGTTTGTTTAACGACTGATACATGGACTTCCGTTCAGAATATTAATTACATGGTGATAACTGCTCATTTCATTGATAGTGAGTGGAACTTGCACAAAAGAATTCTAAATTTTTGTCAAATTGCTAATCATAAAGGAGACACAATAGGAAGAGCAATTGAAAAATGTTTGCAAAGTTGGGGGATTGATAGACTTTTTACCATTACCGTCGATAATGCTAGCTCAAATGATGTAGCATTGACATATTTGGTTAAAAAGTTTAAAGGAAGAAATGAGTTAGTGTTGGATGGTGAATTTCTCCATGTGCGATGTTCTGCTCATATTCTTAATTTGATTGTTAGTGATGCTTTAAAAGATTTACATGTGTCTATAATTCGCATTAGAAATGCTGTGAAGTATGTTAGATCATCTCCAGCAAGATTACAAGCATTTAAAGATTTTGCTAGAGAAGATAAAATTTCGACCAAAAGTTGTCTTAGTATGGATGTTCCAACACGATGGAATTCAACTTTCACTATGTTGGATGGAGCAATTAAATTTCAAAAAACTTTTGAAAGATTAGAAGAACACGACCCAAGATATTTGCCGGAAGGTGAGATACCTATTATTGAAGATTGGGATAATGCTAGAGTGTTTGTGGAGTTCCTGAAGACTTTTTTAGATGTTACTATAAAGTTCTCAGCATCTATGTTTGTAACTTCAAACATTTTCTTTCATGAAATTTTGTTGGTTGAAGAAATAATTCGTGAATACTCGATGTACAACAATGAGTTGTTAAGTCAGATGGCATCAAGCATGCAAGCAAAGTTCAACAAATACTGGGGTATAACTACAAGTGAGAAAACTAATATGTTGTTGTATGTTGCTGTTGTTCTTGACCCTAGATATAAGTTGAATTATGTGAGTTATTGCTTTCATGATTTTTTGGACGAAGAAAGTGCAAAAAAATGGACAAATAAGGTCGAAGAAACATTGCGTCGACTATGTGATGACTATTATTTAAGAATATCAGTGCAAAAGGAACATCCACAAGCACAATCATCTACATCCATAGAAGCATCAAGTTGTCCAAGTCAGAGTGAAATACCATCTATCTCTTCTAATGCATCGAGTGGAACTGGATCTTATAAGGTACGTGCTGCTGTCCATGATAGATATGTGTTTTTAAGTAAGAAAAAAGATCCAGATGATGGTAAAACAGAGGTGGCTCGTTATTTAGATGAAGCTTGTGTAGAGGATGAAAATTTTGATATATTAAATTGGTGGAAGGTAAATTCTGCTCGATTCAAGATTATCAGCCAAGTAGCTAGGGACATCTATAGCATTCCTATATCTACTGTGCCATCTGAATCGGCTTTTAGCACTGGAGGACGAGTATTAGATCCATTTCGAAGTTCACTAACTCCACAAACTGCAGAGGCCCTCATTTGTGCTCAAAATTGGATTCAATCTAAACCTCTTGATGACATGAGTGAAGAAATTGATGGAGCTGAAGAAATTGATGAAGGTAAGATTAATGAATGACATGTCTTGTCTTCAAAAATTGTTTATCACATTGTTTGCATTTTATCAAGTTAATTGTTTTTCTTTTTCTTGTGTCTAGAACTCACAAACATACGCAATGAGATGGAAGTTGCCTTTGAAAACTTGAGCGGTTCTAAATTTCTACTCTCAAATTTCATTTATCTAGTTTATTTATATGAATTTAATTTTATGTTGAACTTCAAGTAACAATTCATGTTTTTGTTTTAGCCTCTTGAAGTCTAACAATGGAGCTGGAGTTGTATCGAGAATGACTTTTTGGGGTAAACTTGTTCATCCCTTCCTTTCTGGGGTAATCTTTTGTTTTTGTTTTATGCATTTTGATATATGAATTTATAGGTATATTGAAGGTACTAGATGATAAATGGATTCAAGTTGTCTTCGAGCCACATGAATTGAAAGTTGGTGGTTTAGAGTTTCCATATGGTGGCAAAAGCGAGGTGCAGTGAATATGACTGCCAAGGGTTCTTCAGGGCAAAATGACTGAAGGATGTCGAGCCAAAATCACTTTGAAGATTTTTTTATTTTTTGTAATTATGCTAGATTTCATGAGTTAGTTTTATAGATCTGTTTTAATTTCCATTGTTGTTGGAATGTGTTTTATTTCAAACTAGAATGAATGTGTTTTGTAAATGAGAAATTGAAAATCAAAATAATTATGAATGATACTTAAAGTAAGGACACAAGAAAAGTGAAGTTCAAGGTATATTATGAATGATACTTAGAGAAATGACACAAGAGAGAAATACTAAGGAACTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCGCGGCCGACCCGACCCGACCCCGGTTCGGGTCAATCTGAACCGGGTCGGGTCGGGTCGGGTTTAGGGTCCGTACAACCCGACCCTGGGTCGGGTCGGGTCGGTTTGTCCGTACAACCGACCCGACCCGGGAATTTTTCACCCCTAATAAATTGGTCAAAGGGGTGAGCTGTGTGACAGCTCAAGACTCTTTTCGAACAAGATGGGCCATGGCTCTCCCATTTGGGCCTTTTTAAGATCGGTTGAGGGAATGCTGAAAAGGCCCAGCCCAATGAAAAATCGACACTTCATTTCCAATCTTTTCAAAATTTTGGATGTCTCTTGAAAATTATATAAAAGTTCCATTAAATCAAAATCAAAATTATCGTGTATCACATTTGCATTTTTCTGGTACATTTTGAAAAAAAAAAAAAAATCAAATTTAGCTTGGTTTAACCATTAGACAAAGATTTTCACCGTTAGCTCTCTCTAGTGACTCTTGATTGTAACCATATAATTATGCTAGACTTAGTTTATTGTCTTGTATAGTTATTCCATTAGATGATGATTGAATTATTAGATGAAAATAGGTAGTTAGACCTACCACCATGCAAGATCGGGGAAACTTCTCAATTCAGTTGGACACTACATTCAAACAATAAATGAGCAATTAAAAAGATTCGATAGACATGAAGTTCGATGTGATTGCATTTGTCATCCATTTATCAATCAATTTGTGGCAACAACTTGAGTTTGACAATGTCATATGCTATTTGTGTTTGAAGTCGATTTACCACGTCAACGCACCCACCTAGGTTTGTTACTCTTCTCGTTGCTTGCAATTAGTAACCGACAAGCAATGTAATTAACAATCAACCATTATTGATCGACAAATCAATGTAAAATAATAATAAAGTTTCTTATATTGTCTACCTTGAAAAAAAAATCTAAGACAACAAATTTATTTACCGATTATTTTCACTCCAAAAGAGTGTTGAACAAGCATATCTTTTGGAGCTGCAAGAAGGTAAGAAATATATGGTCTACCTTCTTCCCAAATCTTATGGATCTATCGGGTCTTTGTAGGGAAAATAACAATTTGGACGAATGGTGGGATGAAATCACAAGACAATTCAGTAGAGAAGAGTCAGAGAAGATTGTGATTATCCTATGGATAATTTGGAACTATATAAACAAAGTCACAATCGACAAGGCAAATGCAGATAATAACCTTCTTGTGCGGTGGATTAAAAGGAACTTTGAAGCGTAGAGAAAACGTACCTCCCATCATCAGATGGATTTTAGGCTGGAGAGCCTTCGGAAACATGAAAAGTGGACCCCCCTCCGAACTGCTTGAAATTAAACTTGGATGCCTCCTAGAATGAAGAATTATCGACATGGGGCGTGGGCTGGATAATCCGTGATTCTTCGGGATCTTTAGTTGAAGCTGGATGCAAACAAATCAAACGACGGTGGACCATTAAAACTCTGGAAATCTTAGCGATCAAGGAGGGTTTGAAGGCATACCTAGCGCAAAAGCGAAATCAGAGTGTCCATTTGATCGTGGAGGCGGATGTCCTCAAAGTTATCCGTGCGTTGAACTACGAAATCGCCGACATTTCCGAAAGCAAAATCGTGATGAACGAGGTGGAGGTTTTGGCGGCTGAAGCGAGCGTGATCTCTTTCATCAAATGCCCTAGAGTAGGGAATCAAATTGCACGAGCAGCGGCAGGTTTTTCGTCGGTGTTCTCTCTGTCATCGACATGTTTTTTGAATCGCCCCCATCTTCCATGCTGGAAGACATTTTTTTTTTAGGAAGATCATCTTCCTTTTTGGTTATTCTCTTTATTAGAAGAGGAGTTAGGTGTAACGAACGTTTTGCTGGCTTAA

mRNA sequence

ATGAAGGAGGCCCAGCTGAAACAGCCGATTATGATCATAATTGAACCTTTGATTGTGTGTTCAAGGCTGATATCGCCCCTTTGTTGTTGGTGGTTTGCTCTCTCTTTCACCCAAAATAGCTCTAGAATTGGGCCTTTTATCAGTGTCATTATCATGGCTCCTCCAACTGTTGCTATGGTTCCCACCAACTTGGCTTGGCTTCTGATGCTTTTGATTTTTACCTTCTCGAGCCTGAAAAAGTATGTGTTGGATTTTAGGAACTTCAATTCATGTTTTAGAGAGGGAGAGATTGGGTTTGGACTGTGTGGTTTGGTGACCAAAAATGGATGTGCTTATTTACTACCTGAGGATCCAAGCCATTACAAAGGTATATTGAAGGTACTAGATGATAAATGGATTCAAGTTGTCTTCGAGCCACATGAATTGAAAGTTGGTGGTTTAGAGTTTCCATATGGTGGCAAAAGCGAGAATGAAGAATTATCGACATGGGGCGTGGGCTGGATAATCCGTGATTCTTCGGGATCTTTAGTTGAAGCTGGATGCAAACAAATCAAACGACGGTGGACCATTAAAACTCTGGAAATCTTAGCGATCAAGGAGGGTTTGAAGGCATACCTAGCGCAAAAGCGAAATCAGAGTGTCCATTTGATCGTGGAGGCGGATGTCCTCAAAGTTATCCGTGCGTTGAACTACGAAATCGCCGACATTTCCGAAAGCAAAATCGTGATGAACGAGGTGGAGGTTTTGGCGGCTGAAGCGAGCGTGATCTCTTTCATCAAATGCCCTAGAGTAGGGAATCAAATTGCACGAGCAGCGGCAGAAGAGGAGTTAGGTGTAACGAACGTTTTGCTGGCTTAA

Coding sequence (CDS)

ATGAAGGAGGCCCAGCTGAAACAGCCGATTATGATCATAATTGAACCTTTGATTGTGTGTTCAAGGCTGATATCGCCCCTTTGTTGTTGGTGGTTTGCTCTCTCTTTCACCCAAAATAGCTCTAGAATTGGGCCTTTTATCAGTGTCATTATCATGGCTCCTCCAACTGTTGCTATGGTTCCCACCAACTTGGCTTGGCTTCTGATGCTTTTGATTTTTACCTTCTCGAGCCTGAAAAAGTATGTGTTGGATTTTAGGAACTTCAATTCATGTTTTAGAGAGGGAGAGATTGGGTTTGGACTGTGTGGTTTGGTGACCAAAAATGGATGTGCTTATTTACTACCTGAGGATCCAAGCCATTACAAAGGTATATTGAAGGTACTAGATGATAAATGGATTCAAGTTGTCTTCGAGCCACATGAATTGAAAGTTGGTGGTTTAGAGTTTCCATATGGTGGCAAAAGCGAGAATGAAGAATTATCGACATGGGGCGTGGGCTGGATAATCCGTGATTCTTCGGGATCTTTAGTTGAAGCTGGATGCAAACAAATCAAACGACGGTGGACCATTAAAACTCTGGAAATCTTAGCGATCAAGGAGGGTTTGAAGGCATACCTAGCGCAAAAGCGAAATCAGAGTGTCCATTTGATCGTGGAGGCGGATGTCCTCAAAGTTATCCGTGCGTTGAACTACGAAATCGCCGACATTTCCGAAAGCAAAATCGTGATGAACGAGGTGGAGGTTTTGGCGGCTGAAGCGAGCGTGATCTCTTTCATCAAATGCCCTAGAGTAGGGAATCAAATTGCACGAGCAGCGGCAGAAGAGGAGTTAGGTGTAACGAACGTTTTGCTGGCTTAA

Protein sequence

MKEAQLKQPIMIIIEPLIVCSRLISPLCCWWFALSFTQNSSRIGPFISVIIMAPPTVAMVPTNLAWLLMLLIFTFSSLKKYVLDFRNFNSCFREGEIGFGLCGLVTKNGCAYLLPEDPSHYKGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSENEELSTWGVGWIIRDSSGSLVEAGCKQIKRRWTIKTLEILAIKEGLKAYLAQKRNQSVHLIVEADVLKVIRALNYEIADISESKIVMNEVEVLAAEASVISFIKCPRVGNQIARAAAEEELGVTNVLLA
Homology
[Close]
BLAST of Spg014416 vs. NCBI nr
Match: KAF9600533.1 (hypothetical protein IFM89_009982 [Coptis chinensis])

HSP 1 Score: 64.3 bits (155), Expect = 1.9e-06
Identity = 29/35 (82.86%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 122 KGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE 157
           KG LKVLDDKWIQV+FEP ELKVG LEF YGG+SE
Sbjct: 113 KGKLKVLDDKWIQVIFEPPELKVGALEFQYGGESE 147

[Close]
BLAST of Spg014416 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia])

HSP 1 Score: 64.3 bits (155), Expect = 1.9e-06
Identity = 36/119 (30.25%), Postives = 67/119 (56.30%), Query Frame = 0 

Query: 159 ELSTWGVGWIIRDSSGSLVEAGCKQIKRRWTIKTLEILAIKEGLKAYLAQKRNQSVHLIV 218
           + +T G+GWI+RD  G +++A C+ I+    I  LE++AI EGL+A + Q+  + +HL  
Sbjct: 98  DTNTGGIGWILRDEKGEVIKASCRIIRAERNITYLEVMAICEGLRA-IRQEHCRPIHL-- 157

Query: 219 EADVLKVIRALNYEIADISESKIVMNEVEVLAAEASVISFIKCPRVGNQIARAAAEEEL 278
           E+D L+ I  L+ +  D +E   ++ E+  +  +  ++S     R  N++A   A   +
Sbjct: 158 ESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEIVSMRHISREANKVAHGLARRAM 213

[Close]
BLAST of Spg014416 vs. NCBI nr
Match: KAF9600497.1 (hypothetical protein IFM89_009946 [Coptis chinensis])

HSP 1 Score: 64.3 bits (155), Expect = 1.9e-06
Identity = 29/35 (82.86%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 122 KGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE 157
           KG LKVLDDKWIQV+FEP ELKVG LEF YGG+SE
Sbjct: 113 KGKLKVLDDKWIQVIFEPPELKVGALEFQYGGESE 147

[Close]
BLAST of Spg014416 vs. NCBI nr
Match: XP_031276424.1 (probable plastid-lipid-associated protein 8, chloroplastic [Pistacia vera])

HSP 1 Score: 63.5 bits (153), Expect = 3.3e-06
Identity = 29/35 (82.86%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 122 KGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE 157
           KG L VLDDKWIQV+FEP ELKVGGLEF YGG+SE
Sbjct: 173 KGKLYVLDDKWIQVIFEPPELKVGGLEFRYGGESE 207

[Close]
BLAST of Spg014416 vs. NCBI nr
Match: OVA15751.1 (Plastid lipid-associated protein/fibrillin conserved domain [Macleaya cordata])

HSP 1 Score: 63.5 bits (153), Expect = 3.3e-06
Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = 0 

Query: 122 KGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE 157
           KG LKVLD+KWIQV+FEP ELKVGGL+F YGG+SE
Sbjct: 183 KGELKVLDEKWIQVIFEPPELKVGGLKFQYGGESE 217

[Close]
BLAST of Spg014416 vs. ExPASy Swiss-Prot
Match: Q941D3 (Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP8 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.0e-05
Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 0 

Query: 123 GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE 157
           G LK LD +W+QV+FEP E+KVG LEF YG +SE
Sbjct: 177 GKLKALDSEWVQVIFEPPEIKVGSLEFKYGFESE 210

[Close]
BLAST of Spg014416 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 9.4e-07
Identity = 36/119 (30.25%), Postives = 67/119 (56.30%), Query Frame = 0 

Query: 159 ELSTWGVGWIIRDSSGSLVEAGCKQIKRRWTIKTLEILAIKEGLKAYLAQKRNQSVHLIV 218
           + +T G+GWI+RD  G +++A C+ I+    I  LE++AI EGL+A + Q+  + +HL  
Sbjct: 98  DTNTGGIGWILRDEKGEVIKASCRIIRAERNITYLEVMAICEGLRA-IRQEHCRPIHL-- 157

Query: 219 EADVLKVIRALNYEIADISESKIVMNEVEVLAAEASVISFIKCPRVGNQIARAAAEEEL 278
           E+D L+ I  L+ +  D +E   ++ E+  +  +  ++S     R  N++A   A   +
Sbjct: 158 ESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEIVSMRHISREANKVAHGLARRAM 213

[Close]
BLAST of Spg014416 vs. ExPASy TrEMBL
Match: A0A200QZ99 (Plastid lipid-associated protein/fibrillin conserved domain OS=Macleaya cordata OX=56857 GN=BVC80_1829g52 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.6e-06
Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = 0 

Query: 122 KGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE 157
           KG LKVLD+KWIQV+FEP ELKVGGL+F YGG+SE
Sbjct: 183 KGELKVLDEKWIQVIFEPPELKVGGLKFQYGGESE 217

[Close]
BLAST of Spg014416 vs. ExPASy TrEMBL
Match: A0A0V0HGS6 (Putative plastid-lipid-associated protein 8, chloroplastic-like OS=Solanum chacoense OX=4108 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.6e-06
Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 122 KGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE 157
           KG L VLD+KWIQVVFEP ELKVGGL+F YGG+SE
Sbjct: 100 KGKLNVLDEKWIQVVFEPPELKVGGLDFQYGGESE 134

[Close]
BLAST of Spg014416 vs. ExPASy TrEMBL
Match: M1AKG1 (Structural molecule OS=Solanum tuberosum OX=4113 GN=102604104 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.6e-06
Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 122 KGILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE 157
           KG L VLD+KWIQVVFEP ELKVGGL+F YGG+SE
Sbjct: 180 KGKLNVLDEKWIQVVFEPPELKVGGLDFQYGGESE 214

[Close]
BLAST of Spg014416 vs. ExPASy TrEMBL
Match: A0A6J1BS60 (probable plastid-lipid-associated protein 8, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005210 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.6e-06
Identity = 29/36 (80.56%), Postives = 30/36 (83.33%), Query Frame = 0 

Query: 123 GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSENE 159
           G LK LDDKWIQVVFEP ELKVGG EF YGG+SE E
Sbjct: 186 GKLKALDDKWIQVVFEPPELKVGGFEFRYGGESEVE 221

[Close]
BLAST of Spg014416 vs. TAIR 10
Match: AT5G19940.1 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 52.4 bits (124), Expect = 7.1e-07
Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 0 

Query: 123 GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE 157
           G LK LD +W+QV+FEP E+KVG LEF YG +SE
Sbjct: 177 GKLKALDSEWVQVIFEPPEIKVGSLEFKYGFESE 210

[Close]
BLAST of Spg014416 vs. TAIR 10
Match: AT5G19940.2 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 52.4 bits (124), Expect = 7.1e-07
Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 0 

Query: 123 GILKVLDDKWIQVVFEPHELKVGGLEFPYGGKSE 157
           G LK LD +W+QV+FEP E+KVG LEF YG +SE
Sbjct: 177 GKLKALDSEWVQVIFEPPEIKVGSLEFKYGFESE 210

[Close]
BLAST of Spg014416 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 7.3e-04
Identity = 30/119 (25.21%), Postives = 57/119 (47.90%), Query Frame = 0 

Query: 164 GVGWIIRDSSGSLVEAGCKQIKRRWTIKTLEILAIKEGLKAYLAQKRNQSVHLIVEADVL 223
           G+GWI+R+ SG ++  G + + R   +   E+ A++    A L   R     +I E+D  
Sbjct: 161 GIGWILRNESGGVLWMGARALPRTKNVLEAELEALR---WAVLTMSRFNYKRIIFESDAQ 220

Query: 224 KVIRALNYEIADISES-KIVMNEVEVLAAEASVISFIKCPRVGNQIARAAAEEELGVTN 282
            ++  LN +  D   + +  + +++ L      + F   PR GN++A   A E +  +N
Sbjct: 221 ALVNLLNSD--DFWPTLQPALEDIQQLLHHFEEVKFEFTPRGGNKVADRIARESISFSN 274

The following BLAST results are available for this feature:
BLAST of Spg014416 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF9600533.11.9e-0682.86hypothetical protein IFM89_009982 [Coptis chinensis][more]
XP_022143535.11.9e-0630.25uncharacterized protein LOC111013412 [Momordica charantia][more]
KAF9600497.11.9e-0682.86hypothetical protein IFM89_009946 [Coptis chinensis][more]
XP_031276424.13.3e-0682.86probable plastid-lipid-associated protein 8, chloroplastic [Pistacia vera][more]
OVA15751.13.3e-0680.00Plastid lipid-associated protein/fibrillin conserved domain [Macleaya cordata][more]
BLAST of Spg014416 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q941D31.0e-0564.71Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thalia... [more]
BLAST of Spg014416 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CP269.4e-0730.25uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A200QZ991.6e-0680.00Plastid lipid-associated protein/fibrillin conserved domain OS=Macleaya cordata ... [more]
A0A0V0HGS63.6e-0680.00Putative plastid-lipid-associated protein 8, chloroplastic-like OS=Solanum chaco... [more]
M1AKG13.6e-0680.00Structural molecule OS=Solanum tuberosum OX=4113 GN=102604104 PE=4 SV=1[more]
A0A6J1BS603.6e-0680.56probable plastid-lipid-associated protein 8, chloroplastic OS=Momordica charanti... [more]
BLAST of Spg014416 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G19940.17.1e-0764.71Plastid-lipid associated protein PAP / fibrillin family protein [more]
AT5G19940.27.1e-0764.71Plastid-lipid associated protein PAP / fibrillin family protein [more]
AT2G34320.17.3e-0425.21Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 161..274
e-value: 1.3E-12
score: 47.6
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 152..277
e-value: 7.5E-7
score: 31.2
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 163..273
e-value: 2.34451E-8
score: 49.62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg014416.1Spg014416.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0010287 plastoglobule
cellular_component GO:0009579 thylakoid
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity