Spg014412 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg014412
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H
Location	scaffold3: 28695703 .. 28699110 (+)
RNA-Seq Expression	Spg014412
Synteny	Spg014412

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGCAAAGTACTGAGATGGAGAAAACAAGGAAAGATATTGAGGAGTTACGAGAAAAAATGGATGCCATTCTTGTCGCCCTGGAAAGAGGCAAAATAATACCTGATATTGCTCAGTCCAGCAATACAATGAATGACCCTCCAATCCGGCAATCAATAGAGGGTACTACTCCAAAATATCGTCCATTGTACAATATTCCAGTAGAGCAGCACCCATTTCCATTTTTCAAGAATGAGCAAGTGCCTGTACACAATCAACCTGGATTTTCACCACCTACAGAGGTACCTCCTAAGGTGACCATTACAGTTCCCAATTTAGATGATCCTGAAATCAGAAAAGAGCTAACGGGAGGTGAGAAAGTCTCTTCTAGTGAAAAACTTGAAGTCTTGGAGGAAAGGTTAAGGGCAGTAGAAGGAACAGACGTCTTCGGAAATATAGATGCAACCAAGCTATGCTTGGTACCAGATGTAATCCTCCCTCCAAAATTCAAGGTGCCCGAGTTTGAAAAGTATGATGGAGCATCCTGTCCTAAAAACCATCTCATCATGTATTGTAGGAAGATGGCAGCATACGTCCAAAATGACAAGCTGTTAATTCACTGCTTCCAGGACAGTCTTACTGGTCCAGCGTCTCGATGGTATATGCAGTTAGACAGCACTCATATATGTTCATGGAAGAATCTAGCCGATTCATTTTTAAAGCAATATAAGCACAACATAGATATGGCTCCTGACCGCCTAGACCTCCAGAGGATGGAAAAGAAGAGCACAGAAAGCTTTAAAGAGTATGCCCAAAGGTGGAGGGATACTGCTGCTCAGGTGCAACCACCTTTAGCCGATAAGGAGCTGTCGACCATGTTTATTAATACTCTCAAATCTCCTTTCTATGATAAGATGATTGGGAGTGCCTCTACCAATTTCTCTGACATAATGACAATTGGAGAGAGAATCGAGTACGGAATTAAGCATGGAAAGATAACTGATACGGCTGGATCATCGACAGCGAAAAAGGCGGTTCCATCGAAGAAAAAAGAGGGGGAAGTTCAGATGATTGGTTTTAATTCAAGACAACCATACCCTAATGCCGGAGTGCCACAATATCACTATCCACCTCCATATGTTTACCCTCAACCCTATATCAATAATACGTCAGCCCAATACTCATCCCCTTACGTCCAAAATCCTCGTCCTACTCAAGGCTACCAGCCTCGGAATCAACAGAACACTCCTTATGTCCAAGGACACCAAAACAATAAAGGCGTCTGTAGACAGACTCATTTTGATCCGATTCCGATGACATATACCGAACTTCTACCCCAACTTTTCCAGAATAATCAGCTGGCACCCGTGCCAATGGACCCAGTAAAGCCACCTTACCCAAAGTGGTATGACCCAAATGCCCGTTGCGACTACCATGCAGGAGCAATTGGACATTCCACTGAAAACTGTACTGCACTCAAGCATAGGGTGCAAGCATTGATCAAGGCAGGATGGTTGAACTTTAAGAAAGAAAATGGTCCAGATGTCAACAACAATTCTCTTCCAAACCACCAGAATGCACAAGTAAATGCGATAGAGGTTAGTGGAACTGATTTGAAAAGGAATGCTAAGAGCATAGTGACTCCCATGGGAGAACTATTCGAAATATTATTCAGTAATGGATACATTGGTGTAGAACGCCTCCAATTAGATTTGGGTGTCAGAGCATACGATGACAGTTTGATGTGTTCTTATCACACTGGGGCAAAAGGGCATTCTATCGACCAATGTCCTCATTTTCGTCTGAAGGTCCAGGAGTTGCTAGATTCACATTTTTTAACAGTTTCTCAAAAGATGGTTCAACTCCCTCAGTATGGGGAAGTTGATATTATAGAAGAATGCTCAAGGTTTTCTCTCAAGCCAAAACCGTTAACAATATCTTATCGCGAGAAGCCCAGTACCCCAAATTCCAAGCCAAGACCGATTACCATCCAGATTCCGACTCCCTTTGAATATCAAAGTTCAAAAGCAGTACCTTGGAATTATGAGTACAAGGTAACTGTTGGTTCCGAACCCCTTCCAATCCATAATATCAGTGGGATAGGAGGTCTAACACGAAGCGGGAAGTGCTATACACCAGAAGACCTATTGAAACCCAAGGGTAAAGAAAAAGGAAAGGCCAAGATCACTGAAGATATCAAGGAAAAAACAGAAGAGCCCATTGCAGTGAAGAACCTGGATGTTAAACAACCAGCATCTGAAGAGGACATCCAAGAATTTTTGAAGTTGGTTAAGCAAAGTGATTATAAAGTGGTTGAACAGTTAGGTCGAACCACTGCAAAGATTTCCATATTGGCTTTGTTATTGGCTTCAGATACGCATCGTAGGACCTTGTTGGACATATTGAATCAAACTTATGTTCCGCAAGATATTACGGTGGACAACTTGGATAACATCGTTGGAAACATAACTGCATCCAGTTCCGTAACTTTCACGGATGATGAGTTACCACCAGAAGGCACCGGACACACTAAAGCCTTGCACATTACAGTTAAGTGCAAAAATTTTGTTGTGGCAAAAGTTCTAGTTGATAATGGTTCCTCCTTGAACATAATGCCTAAATCCACGTTGGAGAAATTGCCTGTTGATATGTCTCATGTAAGACCCAGCACTATGATCGTACGAGCTTTTGATGGGGCACGTAGTGAAGTTGTTGGAGACGTAGAAGTGCCCATTCAGATAGGTCCATGCACCTTTGATATAACCTTTCAGGTTATGAACATTAATTCGGCCTACAGCTTCTTGTTAGGGCGTCCCTGGATTCACTCAGCTGGAGTGGTCCCATCATCATTACACCAAAAACTTAAATTTGTGGTCGACCGCAAACTAGTGATCATATCTGGACAAGAGGATATCTTAGTGTCAAGACCCTCCTCAATGCCCTACATAGAAGCAGCAGAAGAGGTTTTTGAGTCATCATTTCAAGCTTTTGAGATTGCAAATGCCACAACTTTATACGGAGAGATAGGGAAAATGGAGCTGCAACTTTCAAAACTTTCCTTAGCAGGAAGCAACCAAAGCCTCGAAAATTTGTTGAATATGTCGAAAAATATGAAGAGGTTTGGTTTGGGATATAAACCAAGCAAAAAAGATATGATTAAAGCACCCAGACAGGAGAGAGAAAAACGACTGGCTAGATTGGAGAGTCGTGAGCCAAAGTATCAAATGAATATCATTCCTCATCTTCTTGATACCTTCACCTTTGCTGGAATAATTCATCCGGAATCTCAAGACCCTGCAATCATGGCTATAATCGAACAGAAGAAAGAAGCGGGTCCCTTGGTTTATCTGTGCCCAGAAGACTTTGAACTCAATAATTGGACTGTAATGGAGCTGCCATCATTTGTTAATGAGATATCAAAGTAA

mRNA sequence

ATGGAAGAGCAAAGTACTGAGATGGAGAAAACAAGGAAAGATATTGAGGAGTTACGAGAAAAAATGGATGCCATTCTTGTCGCCCTGGAAAGAGGCAAAATAATACCTGATATTGCTCAGTCCAGCAATACAATGAATGACCCTCCAATCCGGCAATCAATAGAGGGTACTACTCCAAAATATCGTCCATTGTACAATATTCCAGTAGAGCAGCACCCATTTCCATTTTTCAAGAATGAGCAAGTGCCTGTACACAATCAACCTGGATTTTCACCACCTACAGAGGTACCTCCTAAGAGCATAGTGACTCCCATGGGAGAACTATTCGAAATATTATTCAGTAATGGATACATTGGTGTAGAACGCCTCCAATTAGATTTGGGTGTCAGAGCATACGATGACAGTTTGATGTGTTCTTATCACACTGGGGCAAAAGGGCATTCTATCGACCAATGTCCTCATTTTCGTCTGAAGGTCCAGGAGTTGCTAGATTCACATTTTTTAACAGTTTCTCAAAAGATGGTTCAACTCCCTCAGTATGGGGAAGTTGATATTATAGAAGAATGCTCAAGCAAAAAAGATATGATTAAAGCACCCAGACAGGAGAGAGAAAAACGACTGGCTAGATTGGAGAGTCGTGAGCCAAAGTATCAAATGAATATCATTCCTCATCTTCTTGATACCTTCACCTTTGCTGGAATAATTCATCCGGAATCTCAAGACCCTGCAATCATGGCTATAATCGAACAGAAGAAAGAAGCGGGTCCCTTGGTTTATCTGTGCCCAGAAGACTTTGAACTCAATAATTGGACTGTAATGGAGCTGCCATCATTTGTTAATGAGATATCAAAGTAA

Coding sequence (CDS)

ATGGAAGAGCAAAGTACTGAGATGGAGAAAACAAGGAAAGATATTGAGGAGTTACGAGAAAAAATGGATGCCATTCTTGTCGCCCTGGAAAGAGGCAAAATAATACCTGATATTGCTCAGTCCAGCAATACAATGAATGACCCTCCAATCCGGCAATCAATAGAGGGTACTACTCCAAAATATCGTCCATTGTACAATATTCCAGTAGAGCAGCACCCATTTCCATTTTTCAAGAATGAGCAAGTGCCTGTACACAATCAACCTGGATTTTCACCACCTACAGAGGTACCTCCTAAGAGCATAGTGACTCCCATGGGAGAACTATTCGAAATATTATTCAGTAATGGATACATTGGTGTAGAACGCCTCCAATTAGATTTGGGTGTCAGAGCATACGATGACAGTTTGATGTGTTCTTATCACACTGGGGCAAAAGGGCATTCTATCGACCAATGTCCTCATTTTCGTCTGAAGGTCCAGGAGTTGCTAGATTCACATTTTTTAACAGTTTCTCAAAAGATGGTTCAACTCCCTCAGTATGGGGAAGTTGATATTATAGAAGAATGCTCAAGCAAAAAAGATATGATTAAAGCACCCAGACAGGAGAGAGAAAAACGACTGGCTAGATTGGAGAGTCGTGAGCCAAAGTATCAAATGAATATCATTCCTCATCTTCTTGATACCTTCACCTTTGCTGGAATAATTCATCCGGAATCTCAAGACCCTGCAATCATGGCTATAATCGAACAGAAGAAAGAAGCGGGTCCCTTGGTTTATCTGTGCCCAGAAGACTTTGAACTCAATAATTGGACTGTAATGGAGCTGCCATCATTTGTTAATGAGATATCAAAGTAA

Protein sequence

MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIAQSSNTMNDPPIRQSIEGTTPKYRPLYNIPVEQHPFPFFKNEQVPVHNQPGFSPPTEVPPKSIVTPMGELFEILFSNGYIGVERLQLDLGVRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEECSSKKDMIKAPRQEREKRLARLESREPKYQMNIIPHLLDTFTFAGIIHPESQDPAIMAIIEQKKEAGPLVYLCPEDFELNNWTVMELPSFVNEISK

Homology

[Close]

BLAST of Spg014412 vs. NCBI nr
Match: XP_022158986.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia])

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-15
Identity = 53/122 (43.44%), Postives = 73/122 (59.84%), Query Frame = 0


Query: 69  VEQHPFPFFKNEQVPVHNQPGFSPPTEVPPKSIVTPMGELFEILFSNGYIGVERLQLDLG 128
           V ++P P  +N Q+           ++V    I TPM ELFEIL  +GY+ VE L  +L 
Sbjct: 430 VSKNPLPNHQNVQINAIECQEIESKSKV--ADIRTPMVELFEILLGSGYVSVEYLCPNLK 489

Query: 129 VRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEE 188
            + YD+SL C +H GAKGHS++QC  FR+KVQELLDS  LTV+       Q   ++I+E+
Sbjct: 490 YKGYDESLTCPFHAGAKGHSLEQCNSFRMKVQELLDSKILTVANS----HQKKGINIVED 545

Query: 189 CS 191
            S
Sbjct: 550 VS 545

[Close]

BLAST of Spg014412 vs. NCBI nr
Match: XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-14
Identity = 57/147 (38.78%), Postives = 81/147 (55.10%), Query Frame = 0


Query: 69  VEQHPFPFFKNEQVPVHNQPGFSPPTEVPPKSIVTPMGELFEILFSNGYIGVERLQLDLG 128
           V ++P    +N Q+      G    ++V    I TP  ELFEIL  +GY+ VE L  +L 
Sbjct: 423 VSKNPLSNHQNVQINAIECQGIESKSKV--ADIRTPKEELFEILLGSGYVSVEYLCPNLK 482

Query: 129 VRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEE 188
            + YD+SL C +H GAKGHS++QC  FR+KVQELLDS  LTV+       Q   ++++E+
Sbjct: 483 YKEYDESLTCPFHAGAKGHSLEQCNSFRMKVQELLDSKILTVANS----HQKKGINVVED 542

Query: 189 CSSKKDMIKAPRQEREKRLARLESREP 216
            S  +    A    + KRL    S +P
Sbjct: 543 VSVAEGSSDA---LKPKRLTIFYSEKP 560

[Close]

BLAST of Spg014412 vs. NCBI nr
Match: XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])

HSP 1 Score: 74.3 bits (181), Expect = 1.9e-09
Identity = 45/101 (44.55%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 1   MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIAQSSNTMND------------P 60
           ME+Q  E EKTRKDIEELREK+D I + LE+GK   D A SSN +++            P
Sbjct: 1   MEDQKAEQEKTRKDIEELREKLDXIXLXLEKGKATADPATSSNPIHEPQETPPYPPGYGP 60

Query: 61  PIRQSIEGTTPK---YRPLYNIPVEQHPFPFFKN-EQVPVH 86
           P+R   EG  P+   Y PLY++P+ Q+P  F K  +Q+P +
Sbjct: 61  PLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTN 101

HSP 2 Score: 91.3 bits (225), Expect = 1.5e-14
Identity = 43/95 (45.26%), Postives = 64/95 (67.37%), Query Frame = 0


Query: 191 SKKDMIKAPRQEREKRLARLESREPKYQMNIIPHLLDTFTFAGIIHPESQDPAIM-AIIE 250
           S+ D+I+    E+ KRL+R E+ E  Y   I+P L  +F  AG IH E  + +++ A+ E
Sbjct: 442 SRGDIIRVRSLEKAKRLSRFENEERDYPRRIVPPLTHSFRSAGTIHQEYDESSVVAAVTE 501

Query: 251 QKKEAGPLVYLCPEDFELNNWTVMELPSFVNEISK 285
           ++++ GP VYLCP+ FEL+NW+V+ELPSFVN   K
Sbjct: 502 EREQVGPFVYLCPDGFELSNWSVIELPSFVNNKXK 536

[Close]

BLAST of Spg014412 vs. NCBI nr
Match: XP_022155098.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia])

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-14
Identity = 56/152 (36.84%), Postives = 81/152 (53.29%), Query Frame = 0


Query: 69  VEQHPFPFFKNEQVPVHNQPGFSPPTEVPPKSIVTPMGELFEILFSNGYIGVERLQLDLG 128
           V+ +P P  KN Q+      G    ++V    I TPM  LFEIL+ +GY+ +E L  D+ 
Sbjct: 532 VKNNPLPNHKNVQINAVECQGIESRSKV--SEITTPMQXLFEILWXHGYMSMEHLCPDIR 591

Query: 129 VRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEE 188
              YD++L C YH GA+GH ++QC  F+ KVQELLD   LTV+Q      Q   +D++E 
Sbjct: 592 CERYDENLTCPYHAGARGHPLEQCSCFKEKVQELLDLKILTVTQS----HQEQRIDVVEY 651

Query: 189 CSSKKDMIKAPRQEREKRLARLESREPKYQMN 221
            S+ +    A    + K L  L   +P+   N
Sbjct: 652 VSTAESSSAA---YKPKPLTVLYREKPEVPSN 674

[Close]

BLAST of Spg014412 vs. NCBI nr
Match: XP_022155098.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia])

HSP 1 Score: 63.2 bits (152), Expect = 4.3e-06
Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 2  EEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIAQSSNTMNDPPIRQSIEGTTPKY 61
          +++ +E EKTRKDIEELREK+DAIL+ALE+GK    IA++SN +++PP  Q   G  P +
Sbjct: 3  DDRKSEQEKTRKDIEELREKLDAILLALEKGK---TIAETSNPIHEPPTPQFPPGFEPSF 61

Query: 62 RP 64
          RP
Sbjct: 63 RP 61

HSP 2 Score: 90.5 bits (223), Expect = 2.5e-14
Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 0


Query: 69  VEQHPFPFFKNEQVPVHNQPGFSPPTEVPPKSIVTPMGELFEILFSNGYIGVERLQLDLG 128
           V  +P P   N Q+           ++V    I TPM ELFEIL  +GY+ VE L  +L 
Sbjct: 365 VSNNPLPNHXNVQINAIECQEIESKSKV--ADITTPMEELFEILLGSGYVSVEYLCPNLK 424

Query: 129 VRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEE 188
            + YD+SL C +H GAKGH+++QC  FR+ VQELLDS  LTV+       Q   ++++E+
Sbjct: 425 YKGYDESLTCPFHAGAKGHALEQCNSFRMIVQELLDSKILTVANS----HQKKGINVVED 484

Query: 189 CSSKKDMIKAPRQE--REKRLARLESREP 216
            S  +  I     +  + KRL    S +P
Sbjct: 485 VSVAEGSIAEGSSDALKPKRLTIFYSEKP 507

[Close]

BLAST of Spg014412 vs. ExPASy TrEMBL
Match: A0A6J1E2J7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 6.4e-16
Identity = 53/122 (43.44%), Postives = 73/122 (59.84%), Query Frame = 0


Query: 69  VEQHPFPFFKNEQVPVHNQPGFSPPTEVPPKSIVTPMGELFEILFSNGYIGVERLQLDLG 128
           V ++P P  +N Q+           ++V    I TPM ELFEIL  +GY+ VE L  +L 
Sbjct: 430 VSKNPLPNHQNVQINAIECQEIESKSKV--ADIRTPMVELFEILLGSGYVSVEYLCPNLK 489

Query: 129 VRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEE 188
            + YD+SL C +H GAKGHS++QC  FR+KVQELLDS  LTV+       Q   ++I+E+
Sbjct: 490 YKGYDESLTCPFHAGAKGHSLEQCNSFRMKVQELLDSKILTVANS----HQKKGINIVED 545

Query: 189 CS 191
            S
Sbjct: 550 VS 545

[Close]

BLAST of Spg014412 vs. ExPASy TrEMBL
Match: A0A6J1DR66 (uncharacterized protein LOC111022791 OS=Momordica charantia OX=3673 GN=LOC111022791 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.1e-15
Identity = 43/95 (45.26%), Postives = 64/95 (67.37%), Query Frame = 0


Query: 191 SKKDMIKAPRQEREKRLARLESREPKYQMNIIPHLLDTFTFAGIIHPESQDPAIM-AIIE 250
           S+ D+I+    E+ KRL+R E+ E  Y   I+P L  +F  AG IH E  + +++ A+ E
Sbjct: 442 SRGDIIRVRSLEKAKRLSRFENEERDYPRRIVPPLTHSFRSAGTIHQEYDESSVVAAVTE 501

Query: 251 QKKEAGPLVYLCPEDFELNNWTVMELPSFVNEISK 285
           ++++ GP VYLCP+ FEL+NW+V+ELPSFVN   K
Sbjct: 502 EREQVGPFVYLCPDGFELSNWSVIELPSFVNNKXK 536

[Close]

BLAST of Spg014412 vs. ExPASy TrEMBL
Match: A0A6J1DZ90 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.1e-15
Identity = 57/147 (38.78%), Postives = 81/147 (55.10%), Query Frame = 0


Query: 69  VEQHPFPFFKNEQVPVHNQPGFSPPTEVPPKSIVTPMGELFEILFSNGYIGVERLQLDLG 128
           V ++P    +N Q+      G    ++V    I TP  ELFEIL  +GY+ VE L  +L 
Sbjct: 423 VSKNPLSNHQNVQINAIECQGIESKSKV--ADIRTPKEELFEILLGSGYVSVEYLCPNLK 482

Query: 129 VRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEE 188
            + YD+SL C +H GAKGHS++QC  FR+KVQELLDS  LTV+       Q   ++++E+
Sbjct: 483 YKEYDESLTCPFHAGAKGHSLEQCNSFRMKVQELLDSKILTVANS----HQKKGINVVED 542

Query: 189 CSSKKDMIKAPRQEREKRLARLESREP 216
            S  +    A    + KRL    S +P
Sbjct: 543 VSVAEGSSDA---LKPKRLTIFYSEKP 560

[Close]

BLAST of Spg014412 vs. ExPASy TrEMBL
Match: A0A6J1DZ90 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 9.0e-10
Identity = 45/101 (44.55%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 1   MEEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIAQSSNTMND------------P 60
           ME+Q  E EKTRKDIEELREK+D I + LE+GK   D A SSN +++            P
Sbjct: 1   MEDQKAEQEKTRKDIEELREKLDXIXLXLEKGKATADPATSSNPIHEPQETPPYPPGYGP 60

Query: 61  PIRQSIEGTTPK---YRPLYNIPVEQHPFPFFKN-EQVPVH 86
           P+R   EG  P+   Y PLY++P+ Q+P  F K  +Q+P +
Sbjct: 61  PLRPVAEGFMPQYTTYNPLYDVPIGQYPHTFVKGAQQIPTN 101

HSP 2 Score: 91.3 bits (225), Expect = 7.1e-15
Identity = 56/152 (36.84%), Postives = 81/152 (53.29%), Query Frame = 0


Query: 69  VEQHPFPFFKNEQVPVHNQPGFSPPTEVPPKSIVTPMGELFEILFSNGYIGVERLQLDLG 128
           V+ +P P  KN Q+      G    ++V    I TPM  LFEIL+ +GY+ +E L  D+ 
Sbjct: 532 VKNNPLPNHKNVQINAVECQGIESRSKV--SEITTPMQXLFEILWXHGYMSMEHLCPDIR 591

Query: 129 VRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEE 188
              YD++L C YH GA+GH ++QC  F+ KVQELLD   LTV+Q      Q   +D++E 
Sbjct: 592 CERYDENLTCPYHAGARGHPLEQCSCFKEKVQELLDLKILTVTQS----HQEQRIDVVEY 651

Query: 189 CSSKKDMIKAPRQEREKRLARLESREPKYQMN 221
            S+ +    A    + K L  L   +P+   N
Sbjct: 652 VSTAESSSAA---YKPKPLTVLYREKPEVPSN 674

[Close]

BLAST of Spg014412 vs. ExPASy TrEMBL
Match: A0A6J1DM29 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia OX=3673 GN=LOC111022231 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.1e-06
Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 2  EEQSTEMEKTRKDIEELREKMDAILVALERGKIIPDIAQSSNTMNDPPIRQSIEGTTPKY 61
          +++ +E EKTRKDIEELREK+DAIL+ALE+GK    IA++SN +++PP  Q   G  P +
Sbjct: 3  DDRKSEQEKTRKDIEELREKLDAILLALEKGK---TIAETSNPIHEPPTPQFPPGFEPSF 61

Query: 62 RP 64
          RP
Sbjct: 63 RP 61

HSP 2 Score: 90.5 bits (223), Expect = 1.2e-14
Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 0


Query: 69  VEQHPFPFFKNEQVPVHNQPGFSPPTEVPPKSIVTPMGELFEILFSNGYIGVERLQLDLG 128
           V  +P P   N Q+           ++V    I TPM ELFEIL  +GY+ VE L  +L 
Sbjct: 365 VSNNPLPNHXNVQINAIECQEIESKSKV--ADITTPMEELFEILLGSGYVSVEYLCPNLK 424

Query: 129 VRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEE 188
            + YD+SL C +H GAKGH+++QC  FR+ VQELLDS  LTV+       Q   ++++E+
Sbjct: 425 YKGYDESLTCPFHAGAKGHALEQCNSFRMIVQELLDSKILTVANS----HQKKGINVVED 484

Query: 189 CSSKKDMIKAPRQE--REKRLARLESREP 216
            S  +  I     +  + KRL    S +P
Sbjct: 485 VSVAEGSIAEGSSDALKPKRLTIFYSEKP 507

The following BLAST results are available for this feature:

BLAST of Spg014412 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158986.1	1.3e-15	43.44	LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]	[more]
XP_022157796.1	1.5e-14	38.78	LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]	[more]
XP_022157796.1	1.9e-09	44.55	LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]	[more]
XP_022155098.1	1.5e-14	36.84	LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica ch...	[more]
XP_022155098.1	4.3e-06	54.84	LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica ch...	[more]

BLAST of Spg014412 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg014412 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E2J7	6.4e-16	43.44	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1	[more]
A0A6J1DR66	7.1e-15	45.26	uncharacterized protein LOC111022791 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DZ90	7.1e-15	38.78	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1	[more]
A0A6J1DZ90	9.0e-10	44.55	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1	[more]
A0A6J1DM29	2.1e-06	54.84	LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia...	[more]

BLAST of Spg014412 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..28

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg014412.1	Spg014412.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0140640	catalytic activity, acting on a nucleic acid