Spg014372 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg014372
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold3: 48356334 .. 48357709 (-)
RNA-Seq Expression	Spg014372
Synteny	Spg014372

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGAAAGTGGCACAAAAATGAACTCACTTACTTTTCTTCACAGCCTCAAAATTTCGAAGCTCTGTTAAGTCAAAAGAGCCCGTGATTTTACAAAAAAGATGACCAATAATCTGGTGGAATTTGGCTATAAATTTGGTTATCATGAACAGCCACTGAATCAAAGCTGTAAAGTGAATTTGTGCAGCAATATTAATGGGCTGCTGCTGCTGCTGCTGCAGAGTTTCTAGCTTCTCATCATCTTTTGCTTATGGCTAAGGCTAATAATGTTTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGCCAACTCCACCAGGCTAGGGTGAGCCAAAAACCCATTCAAAAATTTCCCTTTTTGGCTTTCGGGGTTTCAAGGTTCTGGGTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGCAGGAAGTGGCTGCTGATGTTGTTCAGAAACTGGAACCTAGTGAAGCCTCTCTTGTATTGATTGATGTATGTTTTTACGTACGTTCTAATGTCGAGTTTGGGAATGGTCTAATTTCACTTTTGTCATTGACAACTTCGAATAATGATTTTGACAACAATCGAATAGAAGTGATTTTGGAGAAATCAAATATCACTTTAGATGATTCTTGGATAATCACCTGTGAAATGATTTTTGGTTGAATGATTGAACGAGAATCATTTAAACAAATAATTTATATTTTTGAGGGGTGACTCCAATTCACTTAGTCGTTTTATTAGTTTTTTAAAGGTAGAACTAATCATTCAAATAATTTATCATTAAACACTTTTCAAGGTAGAACACATTTATGGGTTAAGCAAAGTTCAATCGGTCAATTAACTCATAAATTTCCAATCAAGGGTCAATTATTTGAATATTCACCTTCATATGTTGTTGAATTTAAAAAGACAAGCACATATTAGAATCAACTTATTAAGCTCTATTCAAATAACGTGTAGGGATAGAAACGTTGGTTTTGTGTGATACTTTTCGTTTCTAATCAATGTGAAAGTTTTAGATCGTAGAACGATTTAAACCAATCAACCAAATGATTGAAAGAGGAGGAGAGCCGCTACCACCGCCACCACCACCACTGCCGCCGGGAGATTATAAGGATGGAAGAGGAAGATGCCAGTGCTCTTACATTTCTACTGAGTCCCCAAATCAACTGCAGCTGCTCAAAGAACCCCTTTCAGCTCCATTTTGAAGCAATCTCAAGTGCTTTCTAGATCAGTTGATTGTTTAATTTTAGGTTGGATGCTTTTGCTTTTTTATGTAAATTGTAATGAATAATTGTTGGCTGATTAAACTGCCATTGATAATATAAACAGTAGCATGACCTTGCTA

mRNA sequence

ATGACTGAAAAGTTTCTAGCTTCTCATCATCTTTTGCTTATGGCTAAGGCTAATAATGTTTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGCCAACTCCACCAGGCTAGGGAAGTGGCTGCTGATGTTGTTCAGAAACTGGAACCTAGTGAAGCCTCTCTTGTATTGATTGATATCGTAGAACGATTTAAACCAATCAACCAAATGATTGAAAGAGGAGGAGAGCCGCTACCACCGCCACCACCACCACTGCCGCCGGGAGATTATAAGGATGGAAGAGGAAGATGCCAGTGCTCTTACATTTCTACTGAGTCCCCAAATCAACTGCAGCTGCTCAAAGAACCCCTTTCAGCTCCATTTTGA

Coding sequence (CDS)

ATGACTGAAAAGTTTCTAGCTTCTCATCATCTTTTGCTTATGGCTAAGGCTAATAATGTTTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGCCAACTCCACCAGGCTAGGGAAGTGGCTGCTGATGTTGTTCAGAAACTGGAACCTAGTGAAGCCTCTCTTGTATTGATTGATATCGTAGAACGATTTAAACCAATCAACCAAATGATTGAAAGAGGAGGAGAGCCGCTACCACCGCCACCACCACCACTGCCGCCGGGAGATTATAAGGATGGAAGAGGAAGATGCCAGTGCTCTTACATTTCTACTGAGTCCCCAAATCAACTGCAGCTGCTCAAAGAACCCCTTTCAGCTCCATTTTGA

Protein sequence

MTEKFLASHHLLLMAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMIERGGEPLPPPPPPLPPGDYKDGRGRCQCSYISTESPNQLQLLKEPLSAPF

Homology

[Close]

BLAST of Spg014372 vs. NCBI nr
Match: XP_038898732.1 (uncharacterized protein LOC120086256 [Benincasa hispida])

HSP 1 Score: 170.2 bits (430), Expect = 1.1e-38
Identity = 91/113 (80.53%), Postives = 97/113 (85.84%), Query Frame = 0


Query: 14  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMI 73
           MAK  NVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFK +N M+
Sbjct: 1   MAKP-NVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKTMNYML 60

Query: 74  ERGGEPLP--PPPPPLPP-GDYKDGRGRCQCSYISTESPNQLQLLKEPLSAPF 124
           E  G+  P  PPPP LP  GD K+ RGRCQC Y+STESPNQLQL+KEPLSAPF
Sbjct: 61  EGEGDSQPSLPPPPSLPSLGDIKEERGRCQCFYVSTESPNQLQLVKEPLSAPF 112

[Close]

BLAST of Spg014372 vs. NCBI nr
Match: XP_023521779.1 (uncharacterized protein LOC111785636 [Cucurbita pepo subsp. pepo] >XP_023549181.1 uncharacterized protein LOC111807614 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.4 bits (420), Expect = 1.6e-37
Identity = 91/121 (75.21%), Postives = 97/121 (80.17%), Query Frame = 0


Query: 14  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMI 73
           MAK  N  CSIE+EP+TLNQGQLHQAREVAADVVQKLEP+EASL+LIDIVER KP+N MI
Sbjct: 1   MAKP-NARCSIEMEPRTLNQGQLHQAREVAADVVQKLEPTEASLLLIDIVERLKPMNHMI 60

Query: 74  ERGGEPLPPP---------PPPLPP--GDYKDGRGRCQCSYISTESPNQLQLLKEPLSAP 124
           ERG  PL PP          PP PP  GDYK+ RGRCQCSYIS ESPNQLQLLKEPLSAP
Sbjct: 61  ERGELPLLPPLSSPLSSAAGPPAPPFVGDYKEERGRCQCSYISIESPNQLQLLKEPLSAP 120

[Close]

BLAST of Spg014372 vs. NCBI nr
Match: XP_022992446.1 (uncharacterized protein LOC111488747 [Cucurbita maxima])

HSP 1 Score: 164.1 bits (414), Expect = 7.7e-37
Identity = 91/123 (73.98%), Postives = 98/123 (79.67%), Query Frame = 0


Query: 14  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMI 73
           MAK  N  CSIE+EP+TLNQGQLHQAREVAADVVQKLEP+EASL+LIDIVER KP+N +I
Sbjct: 1   MAKP-NARCSIEMEPRTLNQGQLHQAREVAADVVQKLEPTEASLLLIDIVERLKPMNHII 60

Query: 74  ERGGE-PLPPP----------PPPLPP--GDYKDGRGRCQCSYISTESPNQLQLLKEPLS 124
           E GGE PL PP          PPP PP  GDYK+ RGRCQCSYI  ESPNQLQLLKEPLS
Sbjct: 61  EGGGELPLLPPLSSPLSSATGPPPPPPLVGDYKEERGRCQCSYICIESPNQLQLLKEPLS 120

[Close]

BLAST of Spg014372 vs. NCBI nr
Match: KAG6575517.1 (hypothetical protein SDJN03_26156, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014056.1 hypothetical protein SDJN02_24228 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 157.1 bits (396), Expect = 9.5e-35
Identity = 86/123 (69.92%), Postives = 93/123 (75.61%), Query Frame = 0


Query: 14  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMI 73
           MAK  N  CSIE+EP+TL QGQLHQAREVAADVVQKLEP+EASL+LIDIVER KP+N +I
Sbjct: 1   MAKP-NARCSIEMEPRTLKQGQLHQAREVAADVVQKLEPTEASLLLIDIVERLKPMNHII 60

Query: 74  ERGGEPLPP-------------PPPPLPPGDYKDGRGRCQCSYISTESPNQLQLLKEPLS 124
           ERG  PL P             PPPP   GDY + RGRCQCSYI  ESPNQLQLLKEPLS
Sbjct: 61  ERGELPLLPPLSSPLSSAAAAGPPPPPFVGDYNEERGRCQCSYICIESPNQLQLLKEPLS 120

[Close]

BLAST of Spg014372 vs. NCBI nr
Match: XP_022954046.1 (uncharacterized protein LOC111456424 [Cucurbita moschata])

HSP 1 Score: 155.2 bits (391), Expect = 3.6e-34
Identity = 85/122 (69.67%), Postives = 92/122 (75.41%), Query Frame = 0


Query: 14  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMI 73
           MAK  N  CSIE+EP+TL QGQLHQAREVAADVVQKLEP+EASL+LIDIVER KP+N +I
Sbjct: 1   MAKP-NARCSIEMEPRTLKQGQLHQAREVAADVVQKLEPTEASLLLIDIVERLKPMNHII 60

Query: 74  ERGGEPLPP------------PPPPLPPGDYKDGRGRCQCSYISTESPNQLQLLKEPLSA 124
           ERG  PL P            PPPP   GDY +  GRCQCSYI  ESPNQLQLLKEPLSA
Sbjct: 61  ERGELPLLPPLSSPLSSAAAGPPPPPFVGDYNEESGRCQCSYICIESPNQLQLLKEPLSA 120

[Close]

BLAST of Spg014372 vs. ExPASy TrEMBL
Match: A0A6J1JTK7 (uncharacterized protein LOC111488747 OS=Cucurbita maxima OX=3661 GN=LOC111488747 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.7e-37
Identity = 91/123 (73.98%), Postives = 98/123 (79.67%), Query Frame = 0


Query: 14  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMI 73
           MAK  N  CSIE+EP+TLNQGQLHQAREVAADVVQKLEP+EASL+LIDIVER KP+N +I
Sbjct: 1   MAKP-NARCSIEMEPRTLNQGQLHQAREVAADVVQKLEPTEASLLLIDIVERLKPMNHII 60

Query: 74  ERGGE-PLPPP----------PPPLPP--GDYKDGRGRCQCSYISTESPNQLQLLKEPLS 124
           E GGE PL PP          PPP PP  GDYK+ RGRCQCSYI  ESPNQLQLLKEPLS
Sbjct: 61  EGGGELPLLPPLSSPLSSATGPPPPPPLVGDYKEERGRCQCSYICIESPNQLQLLKEPLS 120

[Close]

BLAST of Spg014372 vs. ExPASy TrEMBL
Match: A0A6J1GPS6 (uncharacterized protein LOC111456424 OS=Cucurbita moschata OX=3662 GN=LOC111456424 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.7e-34
Identity = 85/122 (69.67%), Postives = 92/122 (75.41%), Query Frame = 0


Query: 14  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMI 73
           MAK  N  CSIE+EP+TL QGQLHQAREVAADVVQKLEP+EASL+LIDIVER KP+N +I
Sbjct: 1   MAKP-NARCSIEMEPRTLKQGQLHQAREVAADVVQKLEPTEASLLLIDIVERLKPMNHII 60

Query: 74  ERGGEPLPP------------PPPPLPPGDYKDGRGRCQCSYISTESPNQLQLLKEPLSA 124
           ERG  PL P            PPPP   GDY +  GRCQCSYI  ESPNQLQLLKEPLSA
Sbjct: 61  ERGELPLLPPLSSPLSSAAAGPPPPPFVGDYNEESGRCQCSYICIESPNQLQLLKEPLSA 120

[Close]

BLAST of Spg014372 vs. ExPASy TrEMBL
Match: A0A6J1DD75 (uncharacterized protein LOC111019960 OS=Momordica charantia OX=3673 GN=LOC111019960 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.4e-31
Identity = 77/110 (70.00%), Postives = 85/110 (77.27%), Query Frame = 0


Query: 14  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMI 73
           MAKA  +CCSIELEPKTLN GQL++AREVAADVVQKLEP EAS V ID+VERFK +NQ I
Sbjct: 1   MAKA-KICCSIELEPKTLNHGQLYRAREVAADVVQKLEPEEASAVXIDVVERFKTVNQTI 60

Query: 74  ERGGEPLPPPPPPLPPGDYKDGRGRCQCSYISTESPNQLQLLKEPLSAPF 124
           E G        P  P  DY +GR RCQCS + TESPNQ+QLLKEPLSAPF
Sbjct: 61  ESG-------EPSRPLQDYVEGRERCQCSCLPTESPNQMQLLKEPLSAPF 102

[Close]

BLAST of Spg014372 vs. ExPASy TrEMBL
Match: A0A1S3CH00 (uncharacterized protein LOC103500790 OS=Cucumis melo OX=3656 GN=LOC103500790 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.4e-30
Identity = 81/113 (71.68%), Postives = 90/113 (79.65%), Query Frame = 0


Query: 14  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMI 73
           MAK  NVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLID+VER KP+  M 
Sbjct: 1   MAKP-NVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDMVERLKPMKYMF 60

Query: 74  ERGGEPLPPPPPPLPP-GDYKDGRGRCQCSYIST-ESPNQ-LQLLKEPLSAPF 124
           ERGG             G++++ R RCQCSY+ST +SPN+ LQLLKEPLSAPF
Sbjct: 61  ERGGVGGGESESESESLGEFEEERKRCQCSYVSTDQSPNKVLQLLKEPLSAPF 112

[Close]

BLAST of Spg014372 vs. ExPASy TrEMBL
Match: A0A0A0K9S8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452980 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.5e-25
Identity = 73/112 (65.18%), Postives = 86/112 (76.79%), Query Frame = 0


Query: 14  MAKANNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPINQMI 73
           MAK  NVCCSIELEPKTLNQGQLH+AREVAADVVQKLE SEA+LVLID+VER +P+  M 
Sbjct: 1   MAKP-NVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMF 60

Query: 74  ERGGEPLPPPPPPLPPGDYKDGRGRCQCSYIST-ESPNQ-LQLLKEPLSAPF 124
             GG             ++++ R RCQCSY+ST +SPN+ L+LLKEPLSAPF
Sbjct: 61  GGGG------GGGGSLREFEEERKRCQCSYVSTDQSPNKVLELLKEPLSAPF 105

The following BLAST results are available for this feature:

BLAST of Spg014372 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898732.1	1.1e-38	80.53	uncharacterized protein LOC120086256 [Benincasa hispida]	[more]
XP_023521779.1	1.6e-37	75.21	uncharacterized protein LOC111785636 [Cucurbita pepo subsp. pepo] >XP_023549181....	[more]
XP_022992446.1	7.7e-37	73.98	uncharacterized protein LOC111488747 [Cucurbita maxima]	[more]
KAG6575517.1	9.5e-35	69.92	hypothetical protein SDJN03_26156, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022954046.1	3.6e-34	69.67	uncharacterized protein LOC111456424 [Cucurbita moschata]	[more]

BLAST of Spg014372 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg014372 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JTK7	3.7e-37	73.98	uncharacterized protein LOC111488747 OS=Cucurbita maxima OX=3661 GN=LOC111488747...	[more]
A0A6J1GPS6	1.7e-34	69.67	uncharacterized protein LOC111456424 OS=Cucurbita moschata OX=3662 GN=LOC1114564...	[more]
A0A6J1DD75	1.4e-31	70.00	uncharacterized protein LOC111019960 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A1S3CH00	4.4e-30	71.68	uncharacterized protein LOC103500790 OS=Cucumis melo OX=3656 GN=LOC103500790 PE=...	[more]
A0A0A0K9S8	2.5e-25	65.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452980 PE=4 SV=1	[more]

BLAST of Spg014372 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..91
None	No IPR available	PANTHER	PTHR34808	EXPRESSED PROTEIN	coord: 17..123
None	No IPR available	PANTHER	PTHR34808:SF5	SUBFAMILY NOT NAMED	coord: 17..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg014372.1	Spg014372.1	mRNA