Spg014272 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCGATCAAATCCCTAGTTTCCATGGCTTTCATCGCTCTTCTCTTGTTCTCCGATTCCCTGGCCACTTCCGCCGCCGATCGCGGCGAGCCTTCGAATTCTCTCACCGGAATGCTCCGCCGGAACATCCTTCAGACGGCGGCTCATCGGATTGCTGACAACAACGGCGATTCCTCTTTCGATCGGAAAATGAATGTTCTTATCAAAAAGCGGCTTCGACCTGTAGTAACTGGCACCGGCGGCAGTGGCCGTACATCGGCGGCGAATCGGGGCCGAGCTGCGTCGTTTGGCGTTGGATCTGTGCTGTGTATCTCCATTTTTTTGGGATTGTTCATGTGA ATGGCTGCGATCAAATCCCTAGTTTCCATGGCTTTCATCGCTCTTCTCTTGTTCTCCGATTCCCTGGCCACTTCCGCCGCCGATCGCGGCGAGCCTTCGAATTCTCTCACCGGAATGCTCCGCCGGAACATCCTTCAGACGGCGGCTCATCGGATTGCTGACAACAACGGCGATTCCTCTTTCGATCGGAAAATGAATGTTCTTATCAAAAAGCGGCTTCGACCTGTAGTAACTGGCACCGGCGGCAGTGGCCGTACATCGGCGGCGAATCGGGGCCGAGCTGCGTCGTTTGGCGTTGGATCTGTGCTGTGTATCTCCATTTTTTTGGGATTGTTCATGTGA ATGGCTGCGATCAAATCCCTAGTTTCCATGGCTTTCATCGCTCTTCTCTTGTTCTCCGATTCCCTGGCCACTTCCGCCGCCGATCGCGGCGAGCCTTCGAATTCTCTCACCGGAATGCTCCGCCGGAACATCCTTCAGACGGCGGCTCATCGGATTGCTGACAACAACGGCGATTCCTCTTTCGATCGGAAAATGAATGTTCTTATCAAAAAGCGGCTTCGACCTGTAGTAACTGGCACCGGCGGCAGTGGCCGTACATCGGCGGCGAATCGGGGCCGAGCTGCGTCGTTTGGCGTTGGATCTGTGCTGTGTATCTCCATTTTTTTGGGATTGTTCATGTGA MAAIKSLVSMAFIALLLFSDSLATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVLIKKRLRPVVTGTGGSGRTSAANRGRAASFGVGSVLCISIFLGLFM Homology
BLAST of Spg014272 vs. NCBI nr
Match: KAG6575859.1 (hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014393.1 hypothetical protein SDJN02_24570, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 132.1 bits (331), Expect = 3.0e-27 Identity = 77/113 (68.14%), Postives = 91/113 (80.53%), Query Frame = 0
BLAST of Spg014272 vs. NCBI nr
Match: KGN44886.1 (hypothetical protein Csa_015765 [Cucumis sativus]) HSP 1 Score: 102.4 bits (254), Expect = 2.5e-18 Identity = 66/117 (56.41%), Postives = 80/117 (68.38%), Query Frame = 0
BLAST of Spg014272 vs. NCBI nr
Match: KAA0068047.1 (protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no-on-transient A-like [Cucumis melo var. makuwa]) HSP 1 Score: 100.9 bits (250), Expect = 7.4e-18 Identity = 64/111 (57.66%), Postives = 80/111 (72.07%), Query Frame = 0
BLAST of Spg014272 vs. NCBI nr
Match: KAA0046715.1 (E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa] >TYK18251.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]) HSP 1 Score: 97.1 bits (240), Expect = 1.1e-16 Identity = 61/117 (52.14%), Postives = 80/117 (68.38%), Query Frame = 0
BLAST of Spg014272 vs. NCBI nr
Match: KAG6593163.1 (hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 91.7 bits (226), Expect = 4.5e-15 Identity = 63/117 (53.85%), Postives = 80/117 (68.38%), Query Frame = 0
BLAST of Spg014272 vs. ExPASy TrEMBL
Match: A0A0A0KAQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.2e-18 Identity = 66/117 (56.41%), Postives = 80/117 (68.38%), Query Frame = 0
BLAST of Spg014272 vs. ExPASy TrEMBL
Match: A0A5A7VLE5 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00010 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 3.6e-18 Identity = 64/111 (57.66%), Postives = 80/111 (72.07%), Query Frame = 0
BLAST of Spg014272 vs. ExPASy TrEMBL
Match: A0A5D3D3Y6 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001920 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 5.2e-17 Identity = 61/117 (52.14%), Postives = 80/117 (68.38%), Query Frame = 0
BLAST of Spg014272 vs. ExPASy TrEMBL
Match: A0A1S3BT53 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo OX=3656 GN=LOC103492883 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 9.4e-11 Identity = 52/118 (44.07%), Postives = 72/118 (61.02%), Query Frame = 0
BLAST of Spg014272 vs. ExPASy TrEMBL
Match: A0A0A0K929 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394020 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10 Identity = 59/122 (48.36%), Postives = 76/122 (62.30%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|