Spg014245 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCAGCTGATCTGATCAGAGCTGTAAAGTAAACTAAAGAGAAAGAGAGATATATTTCAAAAATTAGATCAACAATGGCAAGCTTCTTGGCCTCCTCATCAGCAACTCTTCCAAAGCTTCGTCATGCTGGATCTGTTCTTGTACGCAGCCCATGGAGTTCTAAAGCTTTTGTCTCTGTCAGACCAAGACAAGTTAGTTTCATTATTTTCATCTCAATAACTACCTATTTGTTATGTGTTTCCCTTTTTGAAGAAAAAAGATAAACAAAATATATGTTTTTCTTTACGACATGTGGGGTGGAGAATTTGAACCTTTGGCCTTTTGATCGAGGGTGTACGAGCTTTGTGCCGGTTGCTTTTGTTGGTAGTTTTTGTTACCTAGTTTGATTTTGAACAAATATGGGGTGCGAGATAAAACTTTCCACCTTAAGAAAGATAATTGATGTTTGGTCTATTTAACTATGTTTGGATTCGCTATTTTATAGTTTTGATTAAGCTTGCCTGGTTTTTTGTCATTTGGGGTTGGTAGTGGTTTTGTTTTATTTTATAGTTTTGAGTGTTTTGTTAGAATTTTAAAAATGTCTCAAAAAGTACATTGGAAAAAAAGGTTAGTAAATATGCATGGATTTTAGGATCCTATGAGATTATAGATAATAGAGAGTCACTGATGACTAATAAGAGCATAGATGATTAACGTGCATAAAGTATATACTTATGAATAGGTCGGATGTCATGGATTCGAATCTCCAATCTCATATTGTTGAATTAAAAAAAAAATGTACATCACTAATAGGACATGCACTATGTATTTATCCCAACTGGGTTGACACAACTCTAGGAACCAAACTAACACGAATGTAGCTAAATTAAACTAGCGTTTGTACTAATGACCAAGAGATTCAAATCCCCCACCTCACATATTATAAAAGAAAAAAAAATTAGGAACCAAAACCATAATGCTAGTAACTTTGATCTATTTAGTTTCATTATTATTACTACTATTATAGTTTTTTTTTTTTTAACTTCGAGATACTAAATTGAGTTAGATTTTGATGATAGTTTAAGATACCATAACAAGTCAAAATTATTCCATAAGTCATAGTCTTAAATCTTTACCCGGTTCGCAATAGGCTAGAAAAATTCGTACCAACAATTTTATATAGGGGCAATTGCATAGATGAAAAAATAGACCAAATTAATAGCAAATATAACACAGTTGCAAACTAATTGCATATATAGCAAAATTAATTGTACAAGACCAAAAAGTTGTCGTCAGATTCTATCCATGTCTATCACTGATAGACTCTGATTATTCAAAGTCTGTCAGTGTTTATCGCTGATATACTCCGGTTAATCGAAATCTATCCGTGACTATAACTGATAGAATTTGATAATCAAAGTCTATCAATGATAGTCATTGATAGATTTCGATTAACCGGAGTCTATCAGCGATAGACATTGGTAGACTCTGAATAATTGGAGTCTATCAGTAGACTGATAGATTCTGATTAATTAGAGTCTATCGCTGATAAACTCTGATAATCGAAGTCTATCAGATAGATTCTAATTAACCAGAGTCTATCAGTGTCTATCAGTAATATAGTCGGATAGATTTTGCTATATTTGCAATTTTTTTTATATTGTGCTATATTTACAATTATATAATTCTTATTTGTCACCCACTACAAATTCTCTTTTATTATATACTTAAAAAGTTGAATTTGAAATTATGGGAAGTTGTTGAATTGGAAATGAAAACAATTCAGGCAAGTTCAAAGGTTGCTGCCGCAGCAGCCGATGGAGCTGCTCAAGGTGTGAAGCGAACCACTGAGAAAGCTGCCGAAGAAGTCAAAGATAAGGCTATCTCTGCCGCCGAGGAGGTTCTTTCATTTTTCCTCTCTTCTTTTCTTGTTCTTACCGCTGTTTTAAGTCTTATTTTAGTTCTTAAACTTTTATATTTAATTTCTTTTTCTCAAACTTCTAGGTGTTATATTTTAAAACTTTTACCTATTTTAGTTCATGCCAGTTAGTGTGTTGCATCGATTAGTTAACAAAAATTTGAACCCATTTCAAAATTCGAGATCTAACTTGTTGTGCACTACTTTTATGTTGTGTTTGGAACCTCGTGATTTCAAATCGTGTTTTTACATGAAAAAAATTCTCAACTAAGACGATCGAACTTTGCAGGATTTCATGGAAATGAGAGAAATGAAAGTTAAATAATTACTTATTTGTCTTTTCTGGTTCCAAACAGAGGATTAGCACTTGTCCACATAAATACTTAGGGCCCGTTTGGTAACGTTCTCGTTTCTTGTTTCTTGTTTCCAATTTTATTAAGAAATCTAAGCATTTAATAACTATGTATGTTTCTTGTTTCTCATTTTTTAGAAACACTCCCAAAATTTGTACAGAACTTTTGGGAACAACTAAAACTAGTTTCTCCTTTTTTGTTCTTGTTTCCAAACATAAATAAGAATATAGGTTTATTATTATTGAATGTATAGGTGTTAGGGTCATGAAATTCTATTTTTCTTTATTAAAAATGAAGAAACGGAAACAAAAAGAAGAACGTTATCAAACGGGTCCTTAATAACTAGGCTCTTCTTAGCCCCCCTCATTTTTAAATCTTATACGACATAGACTTAAACACAAATCTACCTGATGTTAACAAAAATCTATGAACAATACTTGACTACATACCCGTATGTAGGGCTCTCTATATGTCTCGTTAAAATCTTGACAACTAAGAAAGAGAACTTTTTTCTCTCATAGTTGTCTGTGCATTTTAATGGTCATATGTAGAAATATCCCTATGTATCGATATGCAGTCATGAAACATGACATAAAAACCAAAACAAAACTAAACAATATGTTTTTTTTTTTTGGAATGATTGTTAATGTTTGGAAGTGGGAATTAATACAAAATTGCAGGTGAGTCAAAGAACCAAAGAAGTTGCAGGGAAGGTGAGTGAAACAGCACAAGATTTGGCTGGAAAGGCAAAGCAAACAGTTCAAGATGCATGGGGATCAGTGAAGGATACAACTCAAACAATCAAAGAGAAGGTTGTTGGCACAACTGAGGAATCCAAGGAAGCCATTAAAGACACTGCAGAGAATCTCAAACAAAAGATCCAGTCTAACTGTTAGATTTTTCTTTTCTACTTTCATTTCCCACCACCTATATTATTATTATTATTTTTTTCCATAATGCCTCATTCCCTATTTCATGGAAAATATGGGATTTTTCTTTGGCAGTTTTCTTTTTTGTCTTATGATTTTTTTTTAATAACTTTTGAGCTACTAGTTCATTAATTGATGTTTGAAATAAA ATGGCAAGCTTCTTGGCCTCCTCATCAGCAACTCTTCCAAAGCTTCGTCATGCTGGATCTGTTCTTGTACGCAGCCCATGGAGTTCTAAAGCTTTTGTCTCTGTCAGACCAAGACAAGCAAGTTCAAAGGTTGCTGCCGCAGCAGCCGATGGAGCTGCTCAAGGTGTGAAGCGAACCACTGAGAAAGCTGCCGAAGAAGTCAAAGATAAGGCTATCTCTGCCGCCGAGGAGGTTCTTTCATTTTTCCTCTCTTCTTTTCTTGTTCTTACCGCTGTGAGTCAAAGAACCAAAGAAGTTGCAGGGAAGGTGAGTGAAACAGCACAAGATTTGGCTGGAAAGGCAAAGCAAACAGTTCAAGATGCATGGGGATCAGTGAAGGATACAACTCAAACAATCAAAGAGAAGGTTGTTGGCACAACTGAGGAATCCAAGGAAGCCATTAAAGACACTGCAGAGAATCTCAAACAAAAGATCCAGTCTAACTGTTAG ATGGCAAGCTTCTTGGCCTCCTCATCAGCAACTCTTCCAAAGCTTCGTCATGCTGGATCTGTTCTTGTACGCAGCCCATGGAGTTCTAAAGCTTTTGTCTCTGTCAGACCAAGACAAGCAAGTTCAAAGGTTGCTGCCGCAGCAGCCGATGGAGCTGCTCAAGGTGTGAAGCGAACCACTGAGAAAGCTGCCGAAGAAGTCAAAGATAAGGCTATCTCTGCCGCCGAGGAGGTTCTTTCATTTTTCCTCTCTTCTTTTCTTGTTCTTACCGCTGTGAGTCAAAGAACCAAAGAAGTTGCAGGGAAGGTGAGTGAAACAGCACAAGATTTGGCTGGAAAGGCAAAGCAAACAGTTCAAGATGCATGGGGATCAGTGAAGGATACAACTCAAACAATCAAAGAGAAGGTTGTTGGCACAACTGAGGAATCCAAGGAAGCCATTAAAGACACTGCAGAGAATCTCAAACAAAAGATCCAGTCTAACTGTTAG MASFLASSSATLPKLRHAGSVLVRSPWSSKAFVSVRPRQASSKVAAAAADGAAQGVKRTTEKAAEEVKDKAISAAEEVLSFFLSSFLVLTAVSQRTKEVAGKVSETAQDLAGKAKQTVQDAWGSVKDTTQTIKEKVVGTTEESKEAIKDTAENLKQKIQSNC Homology
BLAST of Spg014245 vs. NCBI nr
Match: XP_038897424.1 (uncharacterized protein At4g13230 [Benincasa hispida]) HSP 1 Score: 203.4 bits (516), Expect = 1.5e-48 Identity = 121/162 (74.69%), Postives = 133/162 (82.10%), Query Frame = 0
BLAST of Spg014245 vs. NCBI nr
Match: XP_008457975.1 (PREDICTED: uncharacterized protein At4g13230 [Cucumis melo]) HSP 1 Score: 203.0 bits (515), Expect = 2.0e-48 Identity = 119/162 (73.46%), Postives = 135/162 (83.33%), Query Frame = 0
BLAST of Spg014245 vs. NCBI nr
Match: XP_022152517.1 (uncharacterized protein At4g13230 [Momordica charantia]) HSP 1 Score: 202.2 bits (513), Expect = 3.4e-48 Identity = 124/164 (75.61%), Postives = 133/164 (81.10%), Query Frame = 0
BLAST of Spg014245 vs. NCBI nr
Match: XP_011659168.1 (uncharacterized protein At4g13230 [Cucumis sativus] >KGN44571.1 hypothetical protein Csa_016428 [Cucumis sativus]) HSP 1 Score: 198.7 bits (504), Expect = 3.7e-47 Identity = 115/162 (70.99%), Postives = 133/162 (82.10%), Query Frame = 0
BLAST of Spg014245 vs. NCBI nr
Match: KAA8543454.1 (hypothetical protein F0562_021051 [Nyssa sinensis]) HSP 1 Score: 115.9 bits (289), Expect = 3.2e-22 Identity = 82/177 (46.33%), Postives = 109/177 (61.58%), Query Frame = 0
BLAST of Spg014245 vs. ExPASy Swiss-Prot
Match: Q8LFD5 (Uncharacterized protein At4g13230 OS=Arabidopsis thaliana OX=3702 GN=At4g13230 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.0e-07 Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = 0
BLAST of Spg014245 vs. ExPASy TrEMBL
Match: A0A1S3C7D4 (uncharacterized protein At4g13230 OS=Cucumis melo OX=3656 GN=LOC103497533 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 9.6e-49 Identity = 119/162 (73.46%), Postives = 135/162 (83.33%), Query Frame = 0
BLAST of Spg014245 vs. ExPASy TrEMBL
Match: A0A6J1DGG7 (uncharacterized protein At4g13230 OS=Momordica charantia OX=3673 GN=LOC111020221 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.6e-48 Identity = 124/164 (75.61%), Postives = 133/164 (81.10%), Query Frame = 0
BLAST of Spg014245 vs. ExPASy TrEMBL
Match: A0A0A0K9U4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336500 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.8e-47 Identity = 115/162 (70.99%), Postives = 133/162 (82.10%), Query Frame = 0
BLAST of Spg014245 vs. ExPASy TrEMBL
Match: A0A5B7AK94 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_024954 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 1.4e-23 Identity = 80/170 (47.06%), Postives = 103/170 (60.59%), Query Frame = 0
BLAST of Spg014245 vs. ExPASy TrEMBL
Match: A0A5J5BL23 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_021051 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.5e-22 Identity = 82/177 (46.33%), Postives = 109/177 (61.58%), Query Frame = 0
BLAST of Spg014245 vs. TAIR 10
Match: AT4G13230.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 56.6 bits (135), Expect = 2.1e-08 Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = 0
BLAST of Spg014245 vs. TAIR 10
Match: AT5G44310.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 44.7 bits (104), Expect = 8.4e-05 Identity = 39/127 (30.71%), Postives = 60/127 (47.24%), Query Frame = 0
BLAST of Spg014245 vs. TAIR 10
Match: AT5G44310.2 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 44.7 bits (104), Expect = 8.4e-05 Identity = 39/127 (30.71%), Postives = 60/127 (47.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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