Spg014236 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg014236
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCBS domain-containing protein CBSX1, chloroplastic-like
Locationscaffold3: 36348177 .. 36352253 (+)
RNA-Seq ExpressionSpg014236
SyntenySpg014236
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGTTCCCCCCTCTTCTCTTCTCTATAAATTCACCATTTAGTTTCTAAATTCATTCGAAAAATTCCCTCAATTATTTTTCTCCTTTTTCTTTTGAATAATTCTTTACGAATCTCCGCCGCAAAAACAAAACAATGGCCTCGATTTCTACGCCCTACGTTCCCTCTGTTCTTCCTAATTCCCGATCGTTGCGGAGGCAATTCCGGTCTAATTCATCGCCGTCGAGTCGGTCTAGGTCTCCTGCTGTGGCTTTGGCATTTTCCGGCAACCGTATGGCAAGTTCTGCGGCGGTATGCCTGAATTGTTTTCTTCGATTCCTTGTTCGGAAATTGTGATATTCGTTTACCTTCAAAGTCGGTTGCGATTTTGTATTTGAATTAAGGATGAGATTGGTAGTGATTGATTTGGTTTGTGTGTGTGTATGTTGTTCAGTTTAGGAGTGGATCGTATACGGTTGGAGATTTTATGACGCGGAAGGGGAATCTGCAGGTCATGAAGCCTTCTACCAGTGTTGACGAAGGTAATAATTTAACTTTATTTATTTATTTATTTATTTATTTGTCACAAGTTTTTAAAATAACTCTGTCTTTAAACAGCATTGGAGGTTCTCGTGGAGAAGAGTCTGTCTGGATTTCCTGTGGTTGATGACGACTGGAAACTGGTAATTTTTTCTTTTTTAAGCATTTCACAAGTCCCGTTTGATAACTAATGGTTTTTTGTTTTTTAAAATGACACATGTTTTCCGGTAAACATTTGAGTTCTTAGCTAAATTTATAAGAAAAAATAAAAAAAAAAAAGTATTTGAATTTTTTTTTTTTCTGTTTTTTTTTTTAAATTCACATTGAACTCGAATCGGTTTAAAATTTTTTTGAGAAACATTTTATTTGAAGATGAGTTTTTCCAGAATAACACTGAAGGATGATATAAAAGCAATTTTGGTCTTTTTTTTTTTTCATTTTAGATAAATTTTCTTGTTATGGAAAACTTTGTAGATTTTTTTTTCTATGGTCTATGATATTAGAAAGCAAAGCAAATTTTGGAGGTTTTTTTCTTCAAATGTTTATTGTGAGACTTTTTTTTTTCTTTTTGTTGCTATATGTTTTGTTTCCATTCTAATTAAAACAACATACGAATGTAAGAAACGAAACTTTTTTTTTTTTCGATACAATGATTAAGTTTGGAGTTTAATTTGATGAAATTGGAAGTTTAGTATTAAAATTGATACAAATTTGGAATCAAAATTGATATTTTCCCTAAATGTTTTATGTTATAAATTTTGAATAAAAAAAAATATAAAGATGGTATACAAACAGACCTTAATATCTATTGTTAAATTCCATTACACTTACAGGTTGGTGTTGTCTCCGATTACGATTTATTAGCTTTGGACTCCATTTCAGGTACATCAATATTACAACCATTGTGTTTTAAATTCATATAAAAAATAAATATGGTAGTTTCTTTATGTATGAAAAATCTTTCTGAATGAACGATTTAATTAACAAATAAGAAATAGAAAATCATTTAAAATTCTTAATAATATACTCGTGACTTTTCACGAACAAAAAACTACCTATGTCAATTAATTGTCGGCAAAAATAATTTTATATTTTTCAAATTCATTTTTTTTTTCGTTATTAAAAAGAAATCACATTCAGTTTAATTTTGGTCTAGTTTTATCTTCTTGTCTTCTTTTTTCCCCCAAAACGTTAATATTAACCAATTCGATTTATAACAAAAATATACGCAATACTAACATATGTTAAAGTTCCATAGAAATGTAAGGGTTTTTAAGGAAAGTAATAAAGAAAATGAAAAATATTAGAAAAAAAGTGTTATTTAGAAACTATTTTTAGAAATCAAGTGTCGTGCCCTCTTGAAGAGGCACCATCCGTTTTTCTTTTTTTAATATATTTATTTTAATTAATTAATTGATTAATTTAAATTTATTAGTACTATTATTATATTATATTATATTATATTTGTTTAATGATTACGATTTTTTTAATATAAATATTAGTTTTTATTTCTTTTTCCAAACGATGCTATTGATTATGTTTTTTTATAGATTTTTTTTTTTAATTTCAAAGTTTTGTATTTTTTAATATATATCTATAATCTACATGTTTTCAAGTTTGCATTTTTTTTTTTAGAAAATTCAAGTTTGCATTTTTGTTTGTTGTCTATATCATTTTTTTAATACAAAACACCATATATTAAATTCAATTAATGTTATGAATAGATTTTTCGAAAATTATTGTACATTTATTTCTACAATTTTCGATAAAACTTTATATAGTTAAAACATAATTAAATTTATGTATACATAGAAAGCACAATTACGTTTTAAAAACTAACTATCCTTAAACATTTCCAATTCAATTTCAAGTACAATTAATTTAAAAATAAGTATATAGATTTTTACTTGCATTATTGCATTTAAAATAATACTTACTTTTACTTGCATTTAAAATAGATATATACAGATTTATAATACAATGCAATGAATCGCTAATCTAAATTAATTTTATAGTTTACTAAAATTGCTAATCAATAATGGTTCTTTTTAGCCGAAAGTTAAAACCGGCCGTTTTTTTCGAAAATTCTATTCGTAGCATTAGATGAATTTAATATGTGGTGTTTTGTATTAAAAATGATATAGACAACAAAAAAAAAAATGCAAACTTCAAAACATGTAATTATAAATATATATTAAAAAAATGCAAACTTTAAAATTTTAAAAAATAATCATTAAAAAAAAACATAATCAATAGGTTCATGGTTTGGAAAAAGAAATAAAAACTATATTTATAAAAAAAAAAATAATCAATTTAATTTAATTTAATAATAATAATAAATTTAAATAAAATTAATTAATTAAAATATATATTAAAAAAAATAAAAAACTAAAACTGAAAGTCTGGTTTTCATTTTCTTTATTACTTTCCTTAAAAACCCGAAATTTAATGGTAAAGACAGAATATTTTACGCAGAATTCAGAAATTAAAAAAAGAAAAAAAAAAAAAAAAAAAAGATTGAAATGGAATTAATATAAAGATTTAAAAGTGTGGAATAAGATTTTAAACTTATAATTGTCATTTAATATTGGTATAGGTGTAGGTGGTGGTGAGACTAATATATTCCCAGATGTGAACAGTAGCTGGAAAGTAAGTCAAAATCTTTATTCTCTTTTTAACTTGCCATTTTACCAATTTAACTTATATTCTTTTGATTGAAAAATAAATAAGAAAAAGAAGAAAAAAAAAAACTTATTTAAACTTGAATATTGGCAGAGGTTCAAGGAGATACAGAAATTGTTACGCAAGACCAACGGGGAAGTTGTAGGAGATTTGATGACACCTGCTCCATTGGTTGTTCGTGAAACCACTAATCTAGAAAATGCTGCCAGGTCTATCTCATACAACATATTTATAGTTGAATAGATGAAATAAATAAATAAATGGATTTGTTCCTACGTTACCTCATATCAAATCATCACTTTCGATTAGAATGTCAAGTTAACGAAGTTGAAATGTGTACTAAATTTGTAATTTGATCTAAAAACATTAAACCGAGACATAATACTTGTTTTGTTCGTTTGTGGTAGGTTGTTGCTTGAAACAAAGTTCCATCGTTTACCAGTGGTAGATTGTGATGGCAAACTGGTAAGTTTATATCTTTACCTCTCACATTTTCTTTCTTTCTAAACACATTCTTCATGAACTAATTATGGGCATCGTCTCTTTTGTCAAATTGTTTGTGTTAATTTTTCAAAGGTGGGGATCATTGCGAGAGAAGACATTGTTAGAGCTGGTCTGCAGATGAAACGCGTTCAAAAGAGTTAAATATGATTGAGAACACACATTTTTTTGAAGAGACGTTAGAAGAATGAGCAATATGTATTTATAGATAGATAGGAATTACAAGTTGTTTTGCTAATTTCTTATAGGCACATTACAATTTTGACTCCTATTTGTAGCATCATTCATTTAGCCATAGTTGATTCATTATTCTTGAATGTGATTTTAAGGAGCTTGATTTATTCCAAATAAAATATATCTTTGTTCATCAAGGTGACC

mRNA sequence

ATGGCCTCGATTTCTACGCCCTACGTTCCCTCTGTTCTTCCTAATTCCCGATCGTTGCGGAGGCAATTCCGGTCTAATTCATCGCCGTCGAGTCGGTCTAGGTCTCCTGCTGTGGCTTTGGCATTTTCCGGCAACCGTATGGCAAGTTCTGCGGCGTTTAGGAGTGGATCGTATACGGTTGGAGATTTTATGACGCGGAAGGGGAATCTGCAGGTCATGAAGCCTTCTACCAGTGTTGACGAAGCATTGGAGGTTCTCGTGGAGAAGAGTCTGTCTGGATTTCCTGTGGTTGATGACGACTGGAAACTGGTTGGTGTTGTCTCCGATTACGATTTATTAGCTTTGGACTCCATTTCAGGTGTAGGTGGTGGTGAGACTAATATATTCCCAGATGTGAACAGTAGCTGGAAAAGGTTCAAGGAGATACAGAAATTGTTACGCAAGACCAACGGGGAAGTTGTAGGAGATTTGATGACACCTGCTCCATTGGTTGTTCGTGAAACCACTAATCTAGAAAATGCTGCCAGGTTGTTGCTTGAAACAAAGTTCCATCGTTTACCAGTGGTAGATTGTGATGGCAAACTGGTGGGGATCATTGCGAGAGAAGACATTGTTAGAGCTGGTCTGCAGATGAAACGCGTTCAAAAGAGTTAA

Coding sequence (CDS)

ATGGCCTCGATTTCTACGCCCTACGTTCCCTCTGTTCTTCCTAATTCCCGATCGTTGCGGAGGCAATTCCGGTCTAATTCATCGCCGTCGAGTCGGTCTAGGTCTCCTGCTGTGGCTTTGGCATTTTCCGGCAACCGTATGGCAAGTTCTGCGGCGTTTAGGAGTGGATCGTATACGGTTGGAGATTTTATGACGCGGAAGGGGAATCTGCAGGTCATGAAGCCTTCTACCAGTGTTGACGAAGCATTGGAGGTTCTCGTGGAGAAGAGTCTGTCTGGATTTCCTGTGGTTGATGACGACTGGAAACTGGTTGGTGTTGTCTCCGATTACGATTTATTAGCTTTGGACTCCATTTCAGGTGTAGGTGGTGGTGAGACTAATATATTCCCAGATGTGAACAGTAGCTGGAAAAGGTTCAAGGAGATACAGAAATTGTTACGCAAGACCAACGGGGAAGTTGTAGGAGATTTGATGACACCTGCTCCATTGGTTGTTCGTGAAACCACTAATCTAGAAAATGCTGCCAGGTTGTTGCTTGAAACAAAGTTCCATCGTTTACCAGTGGTAGATTGTGATGGCAAACTGGTGGGGATCATTGCGAGAGAAGACATTGTTAGAGCTGGTCTGCAGATGAAACGCGTTCAAAAGAGTTAA

Protein sequence

MASISTPYVPSVLPNSRSLRRQFRSNSSPSSRSRSPAVALAFSGNRMASSAAFRSGSYTVGDFMTRKGNLQVMKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNLENAARLLLETKFHRLPVVDCDGKLVGIIAREDIVRAGLQMKRVQKS
Homology
BLAST of Spg014236 vs. NCBI nr
Match: XP_038888405.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 348.2 bits (892), Expect = 5.1e-92
Identity = 187/220 (85.00%), Postives = 196/220 (89.09%), Query Frame = 0

Query: 1   MASISTPYVPSVLPNSRSLRRQFR-------SNSSPSSRSRSPAVALAFSGNRMASSAAF 60
           MASISTPYVPSVLPNSR L+ QFR        NSSPSS  RSPAVALAFSG+R+ASS+ F
Sbjct: 1   MASISTPYVPSVLPNSRLLQTQFRLTYAGAGINSSPSSLFRSPAVALAFSGHRVASSSQF 60

Query: 61  RSGSYTVGDFMTRKGNLQVMKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLL 120
           R GSYTVGDFMT+KGNLQV+KPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLL
Sbjct: 61  RIGSYTVGDFMTKKGNLQVLKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLL 120

Query: 121 ALDSISGVGGGETNIFPDVNSSWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNLEN 180
           ALDSISGVG  E NIFPDVNSSWK FK IQKLL K NGEVVGDLMTPAPLVVRET NLE+
Sbjct: 121 ALDSISGVGDVEANIFPDVNSSWKSFKLIQKLLSKKNGEVVGDLMTPAPLVVRETMNLES 180

Query: 181 AARLLLETKFHRLPVVDCDGKLVGIIAREDIVRAGLQMKR 214
           AARLLLETKFH LPVVDC+GKL+GII REDIVRAGLQMKR
Sbjct: 181 AARLLLETKFHLLPVVDCEGKLMGIITREDIVRAGLQMKR 220

BLAST of Spg014236 vs. NCBI nr
Match: XP_022155650.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 327.0 bits (837), Expect = 1.2e-85
Identity = 178/221 (80.54%), Postives = 198/221 (89.59%), Query Frame = 0

Query: 1   MASISTPYV-PSVLPNSRSLRRQFRSNS--SPSSRSRSPAVALAFSGNRMASSAAFRSGS 60
           MASISTPYV P++LPNSR L+R+FRS++  SPSS +RSP+V  A SG+R+A+SA  RSGS
Sbjct: 1   MASISTPYVPPALLPNSRPLQRRFRSSAAFSPSS-NRSPSVVSALSGHRIANSAPSRSGS 60

Query: 61  YTVGDFMTRKGNLQVMKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDS 120
           YTVGDFMT+KGNLQV+KPST++DEALEVLVE  LSGFPVVD DWKLVGVVSDYDLLA+DS
Sbjct: 61  YTVGDFMTKKGNLQVVKPSTTIDEALEVLVENKLSGFPVVDGDWKLVGVVSDYDLLAVDS 120

Query: 121 ISGVGGG--ETNIFPDVNSSWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNLENAA 180
           ISGVGGG  ETNIFPDVN SWK FKEIQKL+ KTNGEV+GDLMTPAPLVVRETT+LENAA
Sbjct: 121 ISGVGGGDWETNIFPDVNISWKSFKEIQKLVSKTNGEVIGDLMTPAPLVVRETTDLENAA 180

Query: 181 RLLLETKFHRLPVVDCDGKLVGIIAREDIVRAGLQ-MKRVQ 216
           RLLLETKFH LPVVDCDGKLVG I REDIV+AGLQ MKR Q
Sbjct: 181 RLLLETKFHSLPVVDCDGKLVGNITREDIVKAGLQIMKRTQ 220

BLAST of Spg014236 vs. NCBI nr
Match: XP_004136971.1 (CBS domain-containing protein CBSX2, chloroplastic [Cucumis sativus] >KGN43916.1 hypothetical protein Csa_017254 [Cucumis sativus])

HSP 1 Score: 324.7 bits (831), Expect = 6.0e-85
Identity = 173/217 (79.72%), Postives = 186/217 (85.71%), Query Frame = 0

Query: 1   MASISTPYVPSVLPNSRSLRRQFRSNSSPSSRSRSPAVALAFSGNRMASSAAFRSGSYTV 60
           MASISTPYVPSV PNSR    Q R      +  RSP VALAFSG+R++SS  FR+GSY V
Sbjct: 1   MASISTPYVPSVFPNSRLPTTQLR-----HAGYRSPVVALAFSGHRVSSSIPFRNGSYAV 60

Query: 61  GDFMTRKGNLQVMKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISG 120
           GDFMT+KGNLQV+KPSTSV+EALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISG
Sbjct: 61  GDFMTKKGNLQVLKPSTSVEEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISG 120

Query: 121 VGGGE-TNIFPDVNSSWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNLENAARLLL 180
           VGGG+  NIFPDVN SW+ FK IQKLL K NGEVVGDLMTPAPLVV ET N ENAARLLL
Sbjct: 121 VGGGDIINIFPDVNCSWESFKLIQKLLSKKNGEVVGDLMTPAPLVVSETMNFENAARLLL 180

Query: 181 ETKFHRLPVVDCDGKLVGIIAREDIVRAGLQMKRVQK 217
           ETKFHRLPVVDC+GKLVGII REDIVR GL+MKR Q+
Sbjct: 181 ETKFHRLPVVDCEGKLVGIITREDIVRVGLEMKRTQE 212

BLAST of Spg014236 vs. NCBI nr
Match: TYK06762.1 (CBS domain-containing protein CBSX2 [Cucumis melo var. makuwa])

HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83
Identity = 173/219 (79.00%), Postives = 188/219 (85.84%), Query Frame = 0

Query: 1   MASISTPYVPSVLPNSRSLRRQFRS----NSSPSSRSRSPAVALAFSGNRMASSAAFR-S 60
           MASISTPYVPS   NSR    QFR     +SSPSS  RSP +ALAFSG+R+ASS  FR +
Sbjct: 1   MASISTPYVPSFFSNSRLPTTQFRHAGTFDSSPSSLFRSPVLALAFSGHRVASSIPFRNN 60

Query: 61  GSYTVGDFMTRKGNLQVMKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLAL 120
           GSYTVGDFMT+KGNL V+KPSTS++EALEVLVEKS+SGFPVVDDDWKLVGVVSDYDLLAL
Sbjct: 61  GSYTVGDFMTKKGNLLVLKPSTSIEEALEVLVEKSVSGFPVVDDDWKLVGVVSDYDLLAL 120

Query: 121 DSISGVGGGE-TNIFPDVNSSWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNLENA 180
           DSISGVGGG+  NIFPDVN SW+ FK IQKLL K NGE+VGDLMTPAPLVV ET N ENA
Sbjct: 121 DSISGVGGGDIINIFPDVNCSWESFKLIQKLLSKKNGEIVGDLMTPAPLVVSETMNFENA 180

Query: 181 ARLLLETKFHRLPVVDCDGKLVGIIAREDIVRAGLQMKR 214
           ARLLLETKFHRLPVVDC+GKLVGII REDIVR GL+MKR
Sbjct: 181 ARLLLETKFHRLPVVDCEGKLVGIITREDIVRVGLEMKR 219

BLAST of Spg014236 vs. NCBI nr
Match: KAG7022460.1 (CBS domain-containing protein CBSX1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301.6 bits (771), Expect = 5.5e-78
Identity = 169/226 (74.78%), Postives = 186/226 (82.30%), Query Frame = 0

Query: 1   MASISTPYVPSVLPNSRSLRR-QFRSN-------SSPSSRSRSPAVALAFSGNRMASSAA 60
           MASISTP   SVLPNSRS R+ Q R+        SSPS R   P VA+A     + SSAA
Sbjct: 1   MASISTP--SSVLPNSRSFRQTQSRAALTGGGYISSPSRRFGPPTVAMAVCSRDVGSSAA 60

Query: 61  FRSGSYTVGDFMTRKGNLQVMKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDL 120
           +R     VGDFMT+KGNLQV+KPST++D+ALEVLVEKSLSGFPV+DDDWKLVGVVSDYDL
Sbjct: 61  YR-----VGDFMTKKGNLQVVKPSTTIDQALEVLVEKSLSGFPVIDDDWKLVGVVSDYDL 120

Query: 121 LALDSISGV-GGGETNIFPDVNSSWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNL 180
           LAL +ISGV GGGETNIFPDVNSSWKRFKEIQKLL KTNGEVV DLMTPAPLVVRE TNL
Sbjct: 121 LALHAISGVGGGGETNIFPDVNSSWKRFKEIQKLLSKTNGEVVADLMTPAPLVVREATNL 180

Query: 181 ENAARLLLETKFHRLPVVDCDGKLVGIIAREDIVRAGLQMKRVQKS 218
           E+AAR+LLETK HRLPVVDCDGKLVG+I REDIVRAGL +KR  +S
Sbjct: 181 ESAARVLLETKLHRLPVVDCDGKLVGVITREDIVRAGLHIKRTHQS 219

BLAST of Spg014236 vs. ExPASy Swiss-Prot
Match: O23193 (CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX1 PE=1 SV=2)

HSP 1 Score: 245.0 bits (624), Expect = 8.0e-64
Identity = 129/214 (60.28%), Postives = 170/214 (79.44%), Query Frame = 0

Query: 2   ASISTPYVPSVLPNSRSLR--RQFRSNSSPSSRSRSPAVALAFSGNRMASSAAFRSGSYT 61
           +S S+PY+  +LP   S++   +F  + S  S+SR P+ + A     M +S++ RSG YT
Sbjct: 19  SSPSSPYL--LLPRFLSVQPCHKFTFSRSFPSKSRIPSASSAAGSTLMTNSSSPRSGVYT 78

Query: 62  VGDFMTRKGNLQVMKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSIS 121
           VG+FMT+K +L V+KP+T+VDEALE+LVE  ++GFPV+D+DWKLVG+VSDYDLLALDSIS
Sbjct: 79  VGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSIS 138

Query: 122 GVGGGETNIFPDVNSSWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNLENAARLLL 181
           G G  E ++FP+V+S+WK F  +QKLL KTNG++VGDLMTPAPLVV E TNLE+AA++LL
Sbjct: 139 GSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILL 198

Query: 182 ETKFHRLPVVDCDGKLVGIIAREDIVRAGLQMKR 214
           ETK+ RLPVVD DGKLVGII R ++VRA LQ+KR
Sbjct: 199 ETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKR 230

BLAST of Spg014236 vs. ExPASy Swiss-Prot
Match: Q9C5D0 (CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX2 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-60
Identity = 130/216 (60.19%), Postives = 163/216 (75.46%), Query Frame = 0

Query: 4   ISTPYVPSVLPNSRS------LRRQFRSNSSPSSRSRSPAVALAFSGNRMASSAAFRSGS 63
           +++ Y  S LP S S      L  + RS++   S + S   A   S N   S  A ++G 
Sbjct: 18  LTSLYHQSFLPISSSSFSLLPLSNRRRSSTFSPSITVSAFFAAPASVNNNNSVPA-KNGG 77

Query: 64  YTVGDFMTRKGNLQVMKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDS 123
           YTVGDFMT + NL V+KPSTSVD+ALE+LVEK ++G PV+DD+W LVGVVSDYDLLALDS
Sbjct: 78  YTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDS 137

Query: 124 ISGVGGGETNIFPDVNSSWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNLENAARL 183
           ISG    +TN+FPDV+S+WK F E+QKL+ KT G+VVGDLMTP+PLVVR++TNLE+AARL
Sbjct: 138 ISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARL 197

Query: 184 LLETKFHRLPVVDCDGKLVGIIAREDIVRAGLQMKR 214
           LLETKF RLPVVD DGKL+GI+ R ++VRA LQ+KR
Sbjct: 198 LLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKR 232

BLAST of Spg014236 vs. ExPASy Swiss-Prot
Match: Q58821 (Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1426 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.3e-09
Identity = 34/132 (25.76%), Postives = 71/132 (53.79%), Query Frame = 0

Query: 81  EALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLAL-----DSISGVGGGETNIFPDVNSS 140
           + + +  +  +SG PV++ D KLVG++S+ D++       + ++ +     ++      +
Sbjct: 35  DVIRLFRKNKISGAPVLNKDGKLVGIISESDIVKTIVTHNEDLNLILPSPLDLIELPLKT 94

Query: 141 WKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNLENAARLLLETKFHRLPVVDCDGKL 200
             + +E  + L+      V D+MT   +V +    + +AA+L+++    RLPVVD +G L
Sbjct: 95  ALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNL 154

Query: 201 VGIIAREDIVRA 208
           +GI+ R D++ A
Sbjct: 155 IGIVTRGDLIEA 166

BLAST of Spg014236 vs. ExPASy Swiss-Prot
Match: O58045 (Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=guaB PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-08
Identity = 39/131 (29.77%), Postives = 65/131 (49.62%), Query Frame = 0

Query: 75  PSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNS 134
           P  +VD AL ++ +  + G PVV+D+ K+VG+++  D+ A +                  
Sbjct: 108 PDETVDFALFLMEKHGIDGLPVVEDE-KVVGIITKKDIAARE------------------ 167

Query: 135 SWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNLENAARLLLETKFHRLPVVDCDGK 194
                           G++V +LMT   + V E+  +E A ++++E +  RLPVVD  GK
Sbjct: 168 ----------------GKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGK 203

Query: 195 LVGIIAREDIV 206
           LVG+I   D+V
Sbjct: 228 LVGLITMSDLV 203

BLAST of Spg014236 vs. ExPASy Swiss-Prot
Match: O67820 (Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=guaB PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-08
Identity = 42/138 (30.43%), Postives = 70/138 (50.72%), Query Frame = 0

Query: 69  NLQVMKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNI 128
           N   +KP T V EAL+++ +  +SG PVVD++ KL+G++++ DL               I
Sbjct: 99  NPVTVKPDTRVKEALDIMAKYKISGVPVVDEERKLIGILTNRDL-------------RFI 158

Query: 129 FPDVNSSWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNLENAARLLLETKFHRLPV 188
            P+  S     K + + + K N       +  AP    E   L+ A  +  + K  +LP+
Sbjct: 159 KPEDYS-----KPVSEFMTKEN-------LITAP----EGITLDEAEEIFRKYKIEKLPI 207

Query: 189 VDCDGKLVGIIAREDIVR 207
           VD +GK+ G+I  +DIV+
Sbjct: 219 VDKEGKIKGLITIKDIVK 207

BLAST of Spg014236 vs. ExPASy TrEMBL
Match: A0A6J1DN09 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111022731 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.9e-86
Identity = 178/221 (80.54%), Postives = 198/221 (89.59%), Query Frame = 0

Query: 1   MASISTPYV-PSVLPNSRSLRRQFRSNS--SPSSRSRSPAVALAFSGNRMASSAAFRSGS 60
           MASISTPYV P++LPNSR L+R+FRS++  SPSS +RSP+V  A SG+R+A+SA  RSGS
Sbjct: 1   MASISTPYVPPALLPNSRPLQRRFRSSAAFSPSS-NRSPSVVSALSGHRIANSAPSRSGS 60

Query: 61  YTVGDFMTRKGNLQVMKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDS 120
           YTVGDFMT+KGNLQV+KPST++DEALEVLVE  LSGFPVVD DWKLVGVVSDYDLLA+DS
Sbjct: 61  YTVGDFMTKKGNLQVVKPSTTIDEALEVLVENKLSGFPVVDGDWKLVGVVSDYDLLAVDS 120

Query: 121 ISGVGGG--ETNIFPDVNSSWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNLENAA 180
           ISGVGGG  ETNIFPDVN SWK FKEIQKL+ KTNGEV+GDLMTPAPLVVRETT+LENAA
Sbjct: 121 ISGVGGGDWETNIFPDVNISWKSFKEIQKLVSKTNGEVIGDLMTPAPLVVRETTDLENAA 180

Query: 181 RLLLETKFHRLPVVDCDGKLVGIIAREDIVRAGLQ-MKRVQ 216
           RLLLETKFH LPVVDCDGKLVG I REDIV+AGLQ MKR Q
Sbjct: 181 RLLLETKFHSLPVVDCDGKLVGNITREDIVKAGLQIMKRTQ 220

BLAST of Spg014236 vs. ExPASy TrEMBL
Match: A0A0A0K7X9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073520 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.9e-85
Identity = 173/217 (79.72%), Postives = 186/217 (85.71%), Query Frame = 0

Query: 1   MASISTPYVPSVLPNSRSLRRQFRSNSSPSSRSRSPAVALAFSGNRMASSAAFRSGSYTV 60
           MASISTPYVPSV PNSR    Q R      +  RSP VALAFSG+R++SS  FR+GSY V
Sbjct: 1   MASISTPYVPSVFPNSRLPTTQLR-----HAGYRSPVVALAFSGHRVSSSIPFRNGSYAV 60

Query: 61  GDFMTRKGNLQVMKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISG 120
           GDFMT+KGNLQV+KPSTSV+EALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISG
Sbjct: 61  GDFMTKKGNLQVLKPSTSVEEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISG 120

Query: 121 VGGGE-TNIFPDVNSSWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNLENAARLLL 180
           VGGG+  NIFPDVN SW+ FK IQKLL K NGEVVGDLMTPAPLVV ET N ENAARLLL
Sbjct: 121 VGGGDIINIFPDVNCSWESFKLIQKLLSKKNGEVVGDLMTPAPLVVSETMNFENAARLLL 180

Query: 181 ETKFHRLPVVDCDGKLVGIIAREDIVRAGLQMKRVQK 217
           ETKFHRLPVVDC+GKLVGII REDIVR GL+MKR Q+
Sbjct: 181 ETKFHRLPVVDCEGKLVGIITREDIVRVGLEMKRTQE 212

BLAST of Spg014236 vs. ExPASy TrEMBL
Match: A0A5D3C646 (CBS domain-containing protein CBSX2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00630 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 5.5e-84
Identity = 173/219 (79.00%), Postives = 188/219 (85.84%), Query Frame = 0

Query: 1   MASISTPYVPSVLPNSRSLRRQFRS----NSSPSSRSRSPAVALAFSGNRMASSAAFR-S 60
           MASISTPYVPS   NSR    QFR     +SSPSS  RSP +ALAFSG+R+ASS  FR +
Sbjct: 1   MASISTPYVPSFFSNSRLPTTQFRHAGTFDSSPSSLFRSPVLALAFSGHRVASSIPFRNN 60

Query: 61  GSYTVGDFMTRKGNLQVMKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLAL 120
           GSYTVGDFMT+KGNL V+KPSTS++EALEVLVEKS+SGFPVVDDDWKLVGVVSDYDLLAL
Sbjct: 61  GSYTVGDFMTKKGNLLVLKPSTSIEEALEVLVEKSVSGFPVVDDDWKLVGVVSDYDLLAL 120

Query: 121 DSISGVGGGE-TNIFPDVNSSWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNLENA 180
           DSISGVGGG+  NIFPDVN SW+ FK IQKLL K NGE+VGDLMTPAPLVV ET N ENA
Sbjct: 121 DSISGVGGGDIINIFPDVNCSWESFKLIQKLLSKKNGEIVGDLMTPAPLVVSETMNFENA 180

Query: 181 ARLLLETKFHRLPVVDCDGKLVGIIAREDIVRAGLQMKR 214
           ARLLLETKFHRLPVVDC+GKLVGII REDIVR GL+MKR
Sbjct: 181 ARLLLETKFHRLPVVDCEGKLVGIITREDIVRVGLEMKR 219

BLAST of Spg014236 vs. ExPASy TrEMBL
Match: A0A1S3C189 (CBS domain-containing protein CBSX2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495670 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.9e-78
Identity = 162/205 (79.02%), Postives = 177/205 (86.34%), Query Frame = 0

Query: 15  NSRSLRRQFRS----NSSPSSRSRSPAVALAFSGNRMASSAAFR-SGSYTVGDFMTRKGN 74
           NSR    QFR     +SSPSS  RSP +ALAFSG+R+ASS  FR +GSYTVGDFMT+KGN
Sbjct: 23  NSRLPTTQFRHAGTFDSSPSSLFRSPVLALAFSGHRVASSIPFRNNGSYTVGDFMTKKGN 82

Query: 75  LQVMKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGE-TNI 134
           L V+KPSTS++EALEVLVEKS+SGFPVVDDDWKLVGVVSDYDLLALDSISGVGGG+  NI
Sbjct: 83  LLVLKPSTSIEEALEVLVEKSVSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGDIINI 142

Query: 135 FPDVNSSWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNLENAARLLLETKFHRLPV 194
           FPDVN SW+ FK IQKLL K NGE+VGDLMTPAPLVV ET N ENAARLLLETKFHRLPV
Sbjct: 143 FPDVNCSWESFKLIQKLLSKKNGEIVGDLMTPAPLVVSETMNFENAARLLLETKFHRLPV 202

Query: 195 VDCDGKLVGIIAREDIVRAGLQMKR 214
           VDC+GKLVGII REDIVR GL+MKR
Sbjct: 203 VDCEGKLVGIITREDIVRVGLEMKR 227

BLAST of Spg014236 vs. ExPASy TrEMBL
Match: A0A6J1EM78 (CBS domain-containing protein CBSX2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434627 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.1e-76
Identity = 169/227 (74.45%), Postives = 185/227 (81.50%), Query Frame = 0

Query: 1   MASISTPYVPSVLPNSRSLRR-QFRSN-------SSPSSRSRSPAVALAFSGNRMASSAA 60
           MASISTP   SVLPNSRS R+ Q R+        SSPSSR     V +A S   + SSAA
Sbjct: 1   MASISTP--SSVLPNSRSFRQTQSRAGLTGGGYISSPSSRFGPRTVGMAVSRRDVGSSAA 60

Query: 61  FRSGSYTVGDFMTRKGNLQVMKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDL 120
           +R     VGDFMT+KGNLQV+KPST+VD+ALEVLVEKSLSGFPV+DDDWKLVGVVSDYDL
Sbjct: 61  YR-----VGDFMTKKGNLQVLKPSTTVDQALEVLVEKSLSGFPVIDDDWKLVGVVSDYDL 120

Query: 121 LALDSISGV--GGGETNIFPDVNSSWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTN 180
           LAL +ISGV  GGGETNIFPDVNSSWKRFKEIQKLL KTNGEVV DLMTPAPLVVRE TN
Sbjct: 121 LALHAISGVGGGGGETNIFPDVNSSWKRFKEIQKLLSKTNGEVVADLMTPAPLVVREATN 180

Query: 181 LENAARLLLETKFHRLPVVDCDGKLVGIIAREDIVRAGLQMKRVQKS 218
           LE+AAR+LLETK HRLPVVD DGKLVG+I REDIVRAGL +KR  +S
Sbjct: 181 LESAARVLLETKLHRLPVVDRDGKLVGVITREDIVRAGLHIKRTHQS 220

BLAST of Spg014236 vs. TAIR 10
Match: AT4G36910.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 245.0 bits (624), Expect = 5.7e-65
Identity = 129/214 (60.28%), Postives = 170/214 (79.44%), Query Frame = 0

Query: 2   ASISTPYVPSVLPNSRSLR--RQFRSNSSPSSRSRSPAVALAFSGNRMASSAAFRSGSYT 61
           +S S+PY+  +LP   S++   +F  + S  S+SR P+ + A     M +S++ RSG YT
Sbjct: 19  SSPSSPYL--LLPRFLSVQPCHKFTFSRSFPSKSRIPSASSAAGSTLMTNSSSPRSGVYT 78

Query: 62  VGDFMTRKGNLQVMKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSIS 121
           VG+FMT+K +L V+KP+T+VDEALE+LVE  ++GFPV+D+DWKLVG+VSDYDLLALDSIS
Sbjct: 79  VGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSIS 138

Query: 122 GVGGGETNIFPDVNSSWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNLENAARLLL 181
           G G  E ++FP+V+S+WK F  +QKLL KTNG++VGDLMTPAPLVV E TNLE+AA++LL
Sbjct: 139 GSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILL 198

Query: 182 ETKFHRLPVVDCDGKLVGIIAREDIVRAGLQMKR 214
           ETK+ RLPVVD DGKLVGII R ++VRA LQ+KR
Sbjct: 199 ETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKR 230

BLAST of Spg014236 vs. TAIR 10
Match: AT4G34120.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 234.6 bits (597), Expect = 7.7e-62
Identity = 130/216 (60.19%), Postives = 163/216 (75.46%), Query Frame = 0

Query: 4   ISTPYVPSVLPNSRS------LRRQFRSNSSPSSRSRSPAVALAFSGNRMASSAAFRSGS 63
           +++ Y  S LP S S      L  + RS++   S + S   A   S N   S  A ++G 
Sbjct: 18  LTSLYHQSFLPISSSSFSLLPLSNRRRSSTFSPSITVSAFFAAPASVNNNNSVPA-KNGG 77

Query: 64  YTVGDFMTRKGNLQVMKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDS 123
           YTVGDFMT + NL V+KPSTSVD+ALE+LVEK ++G PV+DD+W LVGVVSDYDLLALDS
Sbjct: 78  YTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDS 137

Query: 124 ISGVGGGETNIFPDVNSSWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNLENAARL 183
           ISG    +TN+FPDV+S+WK F E+QKL+ KT G+VVGDLMTP+PLVVR++TNLE+AARL
Sbjct: 138 ISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARL 197

Query: 184 LLETKFHRLPVVDCDGKLVGIIAREDIVRAGLQMKR 214
           LLETKF RLPVVD DGKL+GI+ R ++VRA LQ+KR
Sbjct: 198 LLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKR 232

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038888405.15.1e-9285.00CBS domain-containing protein CBSX1, chloroplastic-like [Benincasa hispida][more]
XP_022155650.11.2e-8580.54CBS domain-containing protein CBSX1, chloroplastic-like [Momordica charantia][more]
XP_004136971.16.0e-8579.72CBS domain-containing protein CBSX2, chloroplastic [Cucumis sativus] >KGN43916.1... [more]
TYK06762.11.1e-8379.00CBS domain-containing protein CBSX2 [Cucumis melo var. makuwa][more]
KAG7022460.15.5e-7874.78CBS domain-containing protein CBSX1, chloroplastic, partial [Cucurbita argyrospe... [more]
Match NameE-valueIdentityDescription
O231938.0e-6460.28CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana OX=37... [more]
Q9C5D01.1e-6060.19CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana OX=37... [more]
Q588213.3e-0925.76Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 430... [more]
O580451.6e-0829.77Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii (strain ATCC 700... [more]
O678202.1e-0830.43Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain VF5) OX=22432... [more]
Match NameE-valueIdentityDescription
A0A6J1DN095.9e-8680.54CBS domain-containing protein CBSX1, chloroplastic-like OS=Momordica charantia O... [more]
A0A0A0K7X92.9e-8579.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073520 PE=4 SV=1[more]
A0A5D3C6465.5e-8479.00CBS domain-containing protein CBSX2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A1S3C1895.9e-7879.02CBS domain-containing protein CBSX2, chloroplastic OS=Cucumis melo OX=3656 GN=LO... [more]
A0A6J1EM781.1e-7674.45CBS domain-containing protein CBSX2, chloroplastic OS=Cucurbita moschata OX=3662... [more]
Match NameE-valueIdentityDescription
AT4G36910.15.7e-6560.28Cystathionine beta-synthase (CBS) family protein [more]
AT4G34120.17.7e-6260.19Cystathionine beta-synthase (CBS) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000644CBS domainSMARTSM00116cbs_1coord: 69..117
e-value: 6.7E-6
score: 35.6
coord: 161..209
e-value: 1.4E-11
score: 54.4
IPR000644CBS domainPFAMPF00571CBScoord: 60..114
e-value: 7.3E-12
score: 45.6
coord: 154..207
e-value: 3.5E-15
score: 56.2
IPR000644CBS domainPROSITEPS51371CBScoord: 158..214
score: 14.282863
IPR000644CBS domainPROSITEPS51371CBScoord: 64..126
score: 12.717717
NoneNo IPR availableGENE3D3.10.580.10coord: 55..215
e-value: 5.1E-64
score: 216.7
NoneNo IPR availablePANTHERPTHR48108CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTICcoord: 10..214
NoneNo IPR availablePANTHERPTHR48108:SF12CBS DOMAIN-CONTAINING PROTEIN CBSX1, CHLOROPLASTIC-LIKEcoord: 10..214
NoneNo IPR availableSUPERFAMILY54631CBS-domain paircoord: 53..207

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg014236.1Spg014236.1mRNA