Spg014236 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGTTCCCCCCTCTTCTCTTCTCTATAAATTCACCATTTAGTTTCTAAATTCATTCGAAAAATTCCCTCAATTATTTTTCTCCTTTTTCTTTTGAATAATTCTTTACGAATCTCCGCCGCAAAAACAAAACAATGGCCTCGATTTCTACGCCCTACGTTCCCTCTGTTCTTCCTAATTCCCGATCGTTGCGGAGGCAATTCCGGTCTAATTCATCGCCGTCGAGTCGGTCTAGGTCTCCTGCTGTGGCTTTGGCATTTTCCGGCAACCGTATGGCAAGTTCTGCGGCGGTATGCCTGAATTGTTTTCTTCGATTCCTTGTTCGGAAATTGTGATATTCGTTTACCTTCAAAGTCGGTTGCGATTTTGTATTTGAATTAAGGATGAGATTGGTAGTGATTGATTTGGTTTGTGTGTGTGTATGTTGTTCAGTTTAGGAGTGGATCGTATACGGTTGGAGATTTTATGACGCGGAAGGGGAATCTGCAGGTCATGAAGCCTTCTACCAGTGTTGACGAAGGTAATAATTTAACTTTATTTATTTATTTATTTATTTATTTGTCACAAGTTTTTAAAATAACTCTGTCTTTAAACAGCATTGGAGGTTCTCGTGGAGAAGAGTCTGTCTGGATTTCCTGTGGTTGATGACGACTGGAAACTGGTAATTTTTTCTTTTTTAAGCATTTCACAAGTCCCGTTTGATAACTAATGGTTTTTTGTTTTTTAAAATGACACATGTTTTCCGGTAAACATTTGAGTTCTTAGCTAAATTTATAAGAAAAAATAAAAAAAAAAAAGTATTTGAATTTTTTTTTTTTCTGTTTTTTTTTTTAAATTCACATTGAACTCGAATCGGTTTAAAATTTTTTTGAGAAACATTTTATTTGAAGATGAGTTTTTCCAGAATAACACTGAAGGATGATATAAAAGCAATTTTGGTCTTTTTTTTTTTTCATTTTAGATAAATTTTCTTGTTATGGAAAACTTTGTAGATTTTTTTTTCTATGGTCTATGATATTAGAAAGCAAAGCAAATTTTGGAGGTTTTTTTCTTCAAATGTTTATTGTGAGACTTTTTTTTTTCTTTTTGTTGCTATATGTTTTGTTTCCATTCTAATTAAAACAACATACGAATGTAAGAAACGAAACTTTTTTTTTTTTCGATACAATGATTAAGTTTGGAGTTTAATTTGATGAAATTGGAAGTTTAGTATTAAAATTGATACAAATTTGGAATCAAAATTGATATTTTCCCTAAATGTTTTATGTTATAAATTTTGAATAAAAAAAAATATAAAGATGGTATACAAACAGACCTTAATATCTATTGTTAAATTCCATTACACTTACAGGTTGGTGTTGTCTCCGATTACGATTTATTAGCTTTGGACTCCATTTCAGGTACATCAATATTACAACCATTGTGTTTTAAATTCATATAAAAAATAAATATGGTAGTTTCTTTATGTATGAAAAATCTTTCTGAATGAACGATTTAATTAACAAATAAGAAATAGAAAATCATTTAAAATTCTTAATAATATACTCGTGACTTTTCACGAACAAAAAACTACCTATGTCAATTAATTGTCGGCAAAAATAATTTTATATTTTTCAAATTCATTTTTTTTTTCGTTATTAAAAAGAAATCACATTCAGTTTAATTTTGGTCTAGTTTTATCTTCTTGTCTTCTTTTTTCCCCCAAAACGTTAATATTAACCAATTCGATTTATAACAAAAATATACGCAATACTAACATATGTTAAAGTTCCATAGAAATGTAAGGGTTTTTAAGGAAAGTAATAAAGAAAATGAAAAATATTAGAAAAAAAGTGTTATTTAGAAACTATTTTTAGAAATCAAGTGTCGTGCCCTCTTGAAGAGGCACCATCCGTTTTTCTTTTTTTAATATATTTATTTTAATTAATTAATTGATTAATTTAAATTTATTAGTACTATTATTATATTATATTATATTATATTTGTTTAATGATTACGATTTTTTTAATATAAATATTAGTTTTTATTTCTTTTTCCAAACGATGCTATTGATTATGTTTTTTTATAGATTTTTTTTTTTAATTTCAAAGTTTTGTATTTTTTAATATATATCTATAATCTACATGTTTTCAAGTTTGCATTTTTTTTTTTAGAAAATTCAAGTTTGCATTTTTGTTTGTTGTCTATATCATTTTTTTAATACAAAACACCATATATTAAATTCAATTAATGTTATGAATAGATTTTTCGAAAATTATTGTACATTTATTTCTACAATTTTCGATAAAACTTTATATAGTTAAAACATAATTAAATTTATGTATACATAGAAAGCACAATTACGTTTTAAAAACTAACTATCCTTAAACATTTCCAATTCAATTTCAAGTACAATTAATTTAAAAATAAGTATATAGATTTTTACTTGCATTATTGCATTTAAAATAATACTTACTTTTACTTGCATTTAAAATAGATATATACAGATTTATAATACAATGCAATGAATCGCTAATCTAAATTAATTTTATAGTTTACTAAAATTGCTAATCAATAATGGTTCTTTTTAGCCGAAAGTTAAAACCGGCCGTTTTTTTCGAAAATTCTATTCGTAGCATTAGATGAATTTAATATGTGGTGTTTTGTATTAAAAATGATATAGACAACAAAAAAAAAAATGCAAACTTCAAAACATGTAATTATAAATATATATTAAAAAAATGCAAACTTTAAAATTTTAAAAAATAATCATTAAAAAAAAACATAATCAATAGGTTCATGGTTTGGAAAAAGAAATAAAAACTATATTTATAAAAAAAAAAATAATCAATTTAATTTAATTTAATAATAATAATAAATTTAAATAAAATTAATTAATTAAAATATATATTAAAAAAAATAAAAAACTAAAACTGAAAGTCTGGTTTTCATTTTCTTTATTACTTTCCTTAAAAACCCGAAATTTAATGGTAAAGACAGAATATTTTACGCAGAATTCAGAAATTAAAAAAAGAAAAAAAAAAAAAAAAAAAAGATTGAAATGGAATTAATATAAAGATTTAAAAGTGTGGAATAAGATTTTAAACTTATAATTGTCATTTAATATTGGTATAGGTGTAGGTGGTGGTGAGACTAATATATTCCCAGATGTGAACAGTAGCTGGAAAGTAAGTCAAAATCTTTATTCTCTTTTTAACTTGCCATTTTACCAATTTAACTTATATTCTTTTGATTGAAAAATAAATAAGAAAAAGAAGAAAAAAAAAAACTTATTTAAACTTGAATATTGGCAGAGGTTCAAGGAGATACAGAAATTGTTACGCAAGACCAACGGGGAAGTTGTAGGAGATTTGATGACACCTGCTCCATTGGTTGTTCGTGAAACCACTAATCTAGAAAATGCTGCCAGGTCTATCTCATACAACATATTTATAGTTGAATAGATGAAATAAATAAATAAATGGATTTGTTCCTACGTTACCTCATATCAAATCATCACTTTCGATTAGAATGTCAAGTTAACGAAGTTGAAATGTGTACTAAATTTGTAATTTGATCTAAAAACATTAAACCGAGACATAATACTTGTTTTGTTCGTTTGTGGTAGGTTGTTGCTTGAAACAAAGTTCCATCGTTTACCAGTGGTAGATTGTGATGGCAAACTGGTAAGTTTATATCTTTACCTCTCACATTTTCTTTCTTTCTAAACACATTCTTCATGAACTAATTATGGGCATCGTCTCTTTTGTCAAATTGTTTGTGTTAATTTTTCAAAGGTGGGGATCATTGCGAGAGAAGACATTGTTAGAGCTGGTCTGCAGATGAAACGCGTTCAAAAGAGTTAAATATGATTGAGAACACACATTTTTTTGAAGAGACGTTAGAAGAATGAGCAATATGTATTTATAGATAGATAGGAATTACAAGTTGTTTTGCTAATTTCTTATAGGCACATTACAATTTTGACTCCTATTTGTAGCATCATTCATTTAGCCATAGTTGATTCATTATTCTTGAATGTGATTTTAAGGAGCTTGATTTATTCCAAATAAAATATATCTTTGTTCATCAAGGTGACC ATGGCCTCGATTTCTACGCCCTACGTTCCCTCTGTTCTTCCTAATTCCCGATCGTTGCGGAGGCAATTCCGGTCTAATTCATCGCCGTCGAGTCGGTCTAGGTCTCCTGCTGTGGCTTTGGCATTTTCCGGCAACCGTATGGCAAGTTCTGCGGCGTTTAGGAGTGGATCGTATACGGTTGGAGATTTTATGACGCGGAAGGGGAATCTGCAGGTCATGAAGCCTTCTACCAGTGTTGACGAAGCATTGGAGGTTCTCGTGGAGAAGAGTCTGTCTGGATTTCCTGTGGTTGATGACGACTGGAAACTGGTTGGTGTTGTCTCCGATTACGATTTATTAGCTTTGGACTCCATTTCAGGTGTAGGTGGTGGTGAGACTAATATATTCCCAGATGTGAACAGTAGCTGGAAAAGGTTCAAGGAGATACAGAAATTGTTACGCAAGACCAACGGGGAAGTTGTAGGAGATTTGATGACACCTGCTCCATTGGTTGTTCGTGAAACCACTAATCTAGAAAATGCTGCCAGGTTGTTGCTTGAAACAAAGTTCCATCGTTTACCAGTGGTAGATTGTGATGGCAAACTGGTGGGGATCATTGCGAGAGAAGACATTGTTAGAGCTGGTCTGCAGATGAAACGCGTTCAAAAGAGTTAA ATGGCCTCGATTTCTACGCCCTACGTTCCCTCTGTTCTTCCTAATTCCCGATCGTTGCGGAGGCAATTCCGGTCTAATTCATCGCCGTCGAGTCGGTCTAGGTCTCCTGCTGTGGCTTTGGCATTTTCCGGCAACCGTATGGCAAGTTCTGCGGCGTTTAGGAGTGGATCGTATACGGTTGGAGATTTTATGACGCGGAAGGGGAATCTGCAGGTCATGAAGCCTTCTACCAGTGTTGACGAAGCATTGGAGGTTCTCGTGGAGAAGAGTCTGTCTGGATTTCCTGTGGTTGATGACGACTGGAAACTGGTTGGTGTTGTCTCCGATTACGATTTATTAGCTTTGGACTCCATTTCAGGTGTAGGTGGTGGTGAGACTAATATATTCCCAGATGTGAACAGTAGCTGGAAAAGGTTCAAGGAGATACAGAAATTGTTACGCAAGACCAACGGGGAAGTTGTAGGAGATTTGATGACACCTGCTCCATTGGTTGTTCGTGAAACCACTAATCTAGAAAATGCTGCCAGGTTGTTGCTTGAAACAAAGTTCCATCGTTTACCAGTGGTAGATTGTGATGGCAAACTGGTGGGGATCATTGCGAGAGAAGACATTGTTAGAGCTGGTCTGCAGATGAAACGCGTTCAAAAGAGTTAA MASISTPYVPSVLPNSRSLRRQFRSNSSPSSRSRSPAVALAFSGNRMASSAAFRSGSYTVGDFMTRKGNLQVMKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKRFKEIQKLLRKTNGEVVGDLMTPAPLVVRETTNLENAARLLLETKFHRLPVVDCDGKLVGIIAREDIVRAGLQMKRVQKS Homology
BLAST of Spg014236 vs. NCBI nr
Match: XP_038888405.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 348.2 bits (892), Expect = 5.1e-92 Identity = 187/220 (85.00%), Postives = 196/220 (89.09%), Query Frame = 0
BLAST of Spg014236 vs. NCBI nr
Match: XP_022155650.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Momordica charantia]) HSP 1 Score: 327.0 bits (837), Expect = 1.2e-85 Identity = 178/221 (80.54%), Postives = 198/221 (89.59%), Query Frame = 0
BLAST of Spg014236 vs. NCBI nr
Match: XP_004136971.1 (CBS domain-containing protein CBSX2, chloroplastic [Cucumis sativus] >KGN43916.1 hypothetical protein Csa_017254 [Cucumis sativus]) HSP 1 Score: 324.7 bits (831), Expect = 6.0e-85 Identity = 173/217 (79.72%), Postives = 186/217 (85.71%), Query Frame = 0
BLAST of Spg014236 vs. NCBI nr
Match: TYK06762.1 (CBS domain-containing protein CBSX2 [Cucumis melo var. makuwa]) HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83 Identity = 173/219 (79.00%), Postives = 188/219 (85.84%), Query Frame = 0
BLAST of Spg014236 vs. NCBI nr
Match: KAG7022460.1 (CBS domain-containing protein CBSX1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 301.6 bits (771), Expect = 5.5e-78 Identity = 169/226 (74.78%), Postives = 186/226 (82.30%), Query Frame = 0
BLAST of Spg014236 vs. ExPASy Swiss-Prot
Match: O23193 (CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX1 PE=1 SV=2) HSP 1 Score: 245.0 bits (624), Expect = 8.0e-64 Identity = 129/214 (60.28%), Postives = 170/214 (79.44%), Query Frame = 0
BLAST of Spg014236 vs. ExPASy Swiss-Prot
Match: Q9C5D0 (CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX2 PE=1 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.1e-60 Identity = 130/216 (60.19%), Postives = 163/216 (75.46%), Query Frame = 0
BLAST of Spg014236 vs. ExPASy Swiss-Prot
Match: Q58821 (Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1426 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.3e-09 Identity = 34/132 (25.76%), Postives = 71/132 (53.79%), Query Frame = 0
BLAST of Spg014236 vs. ExPASy Swiss-Prot
Match: O58045 (Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=guaB PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.6e-08 Identity = 39/131 (29.77%), Postives = 65/131 (49.62%), Query Frame = 0
BLAST of Spg014236 vs. ExPASy Swiss-Prot
Match: O67820 (Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=guaB PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.1e-08 Identity = 42/138 (30.43%), Postives = 70/138 (50.72%), Query Frame = 0
BLAST of Spg014236 vs. ExPASy TrEMBL
Match: A0A6J1DN09 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111022731 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 5.9e-86 Identity = 178/221 (80.54%), Postives = 198/221 (89.59%), Query Frame = 0
BLAST of Spg014236 vs. ExPASy TrEMBL
Match: A0A0A0K7X9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073520 PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 2.9e-85 Identity = 173/217 (79.72%), Postives = 186/217 (85.71%), Query Frame = 0
BLAST of Spg014236 vs. ExPASy TrEMBL
Match: A0A5D3C646 (CBS domain-containing protein CBSX2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00630 PE=4 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 5.5e-84 Identity = 173/219 (79.00%), Postives = 188/219 (85.84%), Query Frame = 0
BLAST of Spg014236 vs. ExPASy TrEMBL
Match: A0A1S3C189 (CBS domain-containing protein CBSX2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495670 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 5.9e-78 Identity = 162/205 (79.02%), Postives = 177/205 (86.34%), Query Frame = 0
BLAST of Spg014236 vs. ExPASy TrEMBL
Match: A0A6J1EM78 (CBS domain-containing protein CBSX2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434627 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 1.1e-76 Identity = 169/227 (74.45%), Postives = 185/227 (81.50%), Query Frame = 0
BLAST of Spg014236 vs. TAIR 10
Match: AT4G36910.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 245.0 bits (624), Expect = 5.7e-65 Identity = 129/214 (60.28%), Postives = 170/214 (79.44%), Query Frame = 0
BLAST of Spg014236 vs. TAIR 10
Match: AT4G34120.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 234.6 bits (597), Expect = 7.7e-62 Identity = 130/216 (60.19%), Postives = 163/216 (75.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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