Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGATGCCCAAAAGCGGGACGAAGATTTTGAAACTTTCTTGAAGAAATCCGAAGAAAACCTTCCCCCAAATCGGAGACGAAGACAATGGAGACTCCTCGTTTACTCAATCTTCTTCTCCTTCTCTGCTTCGCCGCCGCCGCTGCAGAAGCAGCATCAACGCGCCGCCCTGGTTTTCTCTTCTCAAGAACCAGAGGAAGATGCACTCCACAGTAAGATCTCCATTTCCTTTATCTAAAATCCGCATTCAATCCAAATTACTCAACGAGACTGCAAAATTAGGTCCAAATCCTCTCATAAACTCTGAAATTTGAGATTTTCTTGTAGGCATTTTCACAAACACATCGACGCATTTACATTAGATTAGATTTGATTTTTCTTTTCTGTCATCGATCGGATTGAGATCAATTCGATTATTTGAACCGTCCAGATTCTGGAGTAGTGGGAGAGAGGCTTGGCCAAGGATGGCGCCGGAGTCGGCGACGGTGGCGAAAATTTTCGGATCGAGAGCTCACGAACGGTACGGATCTGAGATGACGCTAATGGAGGCGGCGGCGGCGGCGGATGAGGAAGAGGAGGCGTTCGGTAGAGTTGTGAAGGAAGCTACTGCAGCATTGTTGAATTCGTATGCGAGAAGAAGGGAGTTTCCATATTCGGCTTGGGAGGTGAAGACTTTGTTCATCAAAGCTTTGGTGTCTAAAGAGGCTGCTGCTCTTCAGTCTCAACGTTTTGCTCTCGCTAATCAGCTCTGTAATTAACGAACTAATCTCTCAAGACAACTGTCTTTTTGTTGTCTTTGGATTTAAGAGATCTTGTGACAAGTAAACGTGATACAGTCGGACTGTTGTCTCGGTTACTAATCATTGGTGTTTGACTTACAAAG
mRNA sequence
ATGGAGACTCCTCGTTTACTCAATCTTCTTCTCCTTCTCTGCTTCGCCGCCGCCGCTGCAGAAGCAGCATCAACGCGCCGCCCTGGTTTTCTCTTCTCAAGAACCAGAGGAAGATGCACTCCACAATTCTGGAGTAGTGGGAGAGAGGCTTGGCCAAGGATGGCGCCGGAGTCGGCGACGGTGGCGAAAATTTTCGGATCGAGAGCTCACGAACGGTACGGATCTGAGATGACGCTAATGGAGGCGGCGGCGGCGGCGGATGAGGAAGAGGAGGCGTTCGGTAGAGTTGTGAAGGAAGCTACTGCAGCATTGTTGAATTCGTATGCGAGAAGAAGGGAGTTTCCATATTCGGCTTGGGAGGTGAAGACTTTGTTCATCAAAGCTTTGGTGTCTAAAGAGGCTGCTGCTCTTCAGTCTCAACGTTTTGCTCTCGCTAATCAGCTCTGTAATTAA
Coding sequence (CDS)
ATGGAGACTCCTCGTTTACTCAATCTTCTTCTCCTTCTCTGCTTCGCCGCCGCCGCTGCAGAAGCAGCATCAACGCGCCGCCCTGGTTTTCTCTTCTCAAGAACCAGAGGAAGATGCACTCCACAATTCTGGAGTAGTGGGAGAGAGGCTTGGCCAAGGATGGCGCCGGAGTCGGCGACGGTGGCGAAAATTTTCGGATCGAGAGCTCACGAACGGTACGGATCTGAGATGACGCTAATGGAGGCGGCGGCGGCGGCGGATGAGGAAGAGGAGGCGTTCGGTAGAGTTGTGAAGGAAGCTACTGCAGCATTGTTGAATTCGTATGCGAGAAGAAGGGAGTTTCCATATTCGGCTTGGGAGGTGAAGACTTTGTTCATCAAAGCTTTGGTGTCTAAAGAGGCTGCTGCTCTTCAGTCTCAACGTTTTGCTCTCGCTAATCAGCTCTGTAATTAA
Protein sequence
METPRLLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEATAALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN
Homology
BLAST of Spg014220 vs. NCBI nr
Match:
XP_038899192.1 (uncharacterized protein LOC120086555 [Benincasa hispida])
HSP 1 Score: 249.6 bits (636), Expect = 1.7e-62
Identity = 137/158 (86.71%), Postives = 141/158 (89.24%), Query Frame = 0
Query: 1 METPRLLN-LLLLLCFA---AAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAP 60
M++ RL N LLLLLCFA A AAEA STRRPGFLFSRTRGRCT QFWSSGREAWPRMAP
Sbjct: 1 MDSSRLFNLLLLLLCFAGAVAVAAEAGSTRRPGFLFSRTRGRCTAQFWSSGREAWPRMAP 60
Query: 61 ESATVAKIFGSRAHERYGSEMTLMEAA----AAADEEEEAFGRVVKEATAALLNSYARRR 120
ESATVAKIFGSRAHERYGSEMTLMEAA AAADEEEEAFGRVVKEAT ALLNSYARRR
Sbjct: 61 ESATVAKIFGSRAHERYGSEMTLMEAAAATVAAADEEEEAFGRVVKEATVALLNSYARRR 120
Query: 121 EFPYSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN 151
EFPYSAWEVKTLFIKALVSKEAA LQS+RFA AN+ CN
Sbjct: 121 EFPYSAWEVKTLFIKALVSKEAAVLQSRRFAFANESCN 158
BLAST of Spg014220 vs. NCBI nr
Match:
XP_004148954.1 (uncharacterized protein LOC101220310 [Cucumis sativus] >KGN44734.1 hypothetical protein Csa_015820 [Cucumis sativus])
HSP 1 Score: 246.9 bits (629), Expect = 1.1e-61
Identity = 131/151 (86.75%), Postives = 134/151 (88.74%), Query Frame = 0
Query: 1 METPRLLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESAT 60
M++ R LNLLLLLCFAAA AE AS RRPGFLFSRT GRCT QFWSS EAWPRMAPESAT
Sbjct: 1 MDSSRFLNLLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESAT 60
Query: 61 VAKIFGSRAHERYGSEMTLMEAAA-AADEEEEAFGRVVKEATAALLNSYARRREFPYSAW 120
VAKIFGSRAHERYGSEMTLMEAAA A DEEEE FGRVVKEATAALLNSY RRR FPYSAW
Sbjct: 61 VAKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAW 120
Query: 121 EVKTLFIKALVSKEAAALQSQRFALANQLCN 151
EVKTLFIKALVSKEAA LQSQRFA AN+ CN
Sbjct: 121 EVKTLFIKALVSKEAAVLQSQRFAFANESCN 151
BLAST of Spg014220 vs. NCBI nr
Match:
XP_022991546.1 (uncharacterized protein LOC111488125 [Cucurbita maxima])
HSP 1 Score: 233.4 bits (594), Expect = 1.3e-57
Identity = 129/154 (83.77%), Postives = 137/154 (88.96%), Query Frame = 0
Query: 1 METPRLLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESAT 60
MET RLL+ LLLL FAAAA EAA +RRPGFLFSRTRGRCTP+FWSS REAWPRMAPESAT
Sbjct: 1 MET-RLLSFLLLLYFAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESAT 60
Query: 61 VAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGRVVKEATAALLNSYARRREFPY 120
VAKIFGSRAHERYGSEMTL+ AA A +EEEEAFGRVVKEATAALLNSYA RR+FPY
Sbjct: 61 VAKIFGSRAHERYGSEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYA-RRDFPY 120
Query: 121 SAWEVKTLFIKALVSKEAAALQSQRFALANQLCN 151
+AWEVKTL IKALVSKEAAALQSQRFA AN+ CN
Sbjct: 121 AAWEVKTLLIKALVSKEAAALQSQRFAFANESCN 152
BLAST of Spg014220 vs. NCBI nr
Match:
XP_022953859.1 (uncharacterized protein LOC111456270 [Cucurbita moschata])
HSP 1 Score: 231.9 bits (590), Expect = 3.7e-57
Identity = 129/155 (83.23%), Postives = 137/155 (88.39%), Query Frame = 0
Query: 1 METPRLLNLLLLLCFA-AAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESA 60
MET RLL+ LLLL FA AAA EAA +RRPGFLFSRTRGRCTP+FWSS REAWPRMAPESA
Sbjct: 1 METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESA 60
Query: 61 TVAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGRVVKEATAALLNSYARRREFP 120
TVAKIFGSRAHERYGSEMTL+ AA A +EEEEAFGRVVKEATAALLNSYA RR+FP
Sbjct: 61 TVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGRVVKEATAALLNSYA-RRDFP 120
Query: 121 YSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN 151
Y+AWEVKTL IKALVSKEAAALQSQRFA AN+ CN
Sbjct: 121 YAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN 154
BLAST of Spg014220 vs. NCBI nr
Match:
XP_023548905.1 (uncharacterized protein LOC111807417 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 228.4 bits (581), Expect = 4.1e-56
Identity = 128/155 (82.58%), Postives = 135/155 (87.10%), Query Frame = 0
Query: 1 METPRLLNLLLLLCFA-AAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESA 60
MET RLL+ LLLL FA AAA EAA +R PGFLFSRTRGRCTP+FWSS REAWPRMAPESA
Sbjct: 1 METFRLLSYLLLLYFATAAAGEAALSRPPGFLFSRTRGRCTPEFWSSRREAWPRMAPESA 60
Query: 61 TVAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGRVVKEATAALLNSYARRREFP 120
TVAKIFGSRAHERYGSEMTL+ AA A +EEEEAFGRVVKEATAALLNSYA RR+FP
Sbjct: 61 TVAKIFGSRAHERYGSEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYA-RRDFP 120
Query: 121 YSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN 151
YSAWEVKTL IKALVSKEAAALQS RFA AN+ CN
Sbjct: 121 YSAWEVKTLLIKALVSKEAAALQSHRFAFANESCN 154
BLAST of Spg014220 vs. ExPASy TrEMBL
Match:
A0A0A0K735 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375760 PE=4 SV=1)
HSP 1 Score: 246.9 bits (629), Expect = 5.4e-62
Identity = 131/151 (86.75%), Postives = 134/151 (88.74%), Query Frame = 0
Query: 1 METPRLLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESAT 60
M++ R LNLLLLLCFAAA AE AS RRPGFLFSRT GRCT QFWSS EAWPRMAPESAT
Sbjct: 1 MDSSRFLNLLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESAT 60
Query: 61 VAKIFGSRAHERYGSEMTLMEAAA-AADEEEEAFGRVVKEATAALLNSYARRREFPYSAW 120
VAKIFGSRAHERYGSEMTLMEAAA A DEEEE FGRVVKEATAALLNSY RRR FPYSAW
Sbjct: 61 VAKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAW 120
Query: 121 EVKTLFIKALVSKEAAALQSQRFALANQLCN 151
EVKTLFIKALVSKEAA LQSQRFA AN+ CN
Sbjct: 121 EVKTLFIKALVSKEAAVLQSQRFAFANESCN 151
BLAST of Spg014220 vs. ExPASy TrEMBL
Match:
A0A6J1JR18 (uncharacterized protein LOC111488125 OS=Cucurbita maxima OX=3661 GN=LOC111488125 PE=4 SV=1)
HSP 1 Score: 233.4 bits (594), Expect = 6.1e-58
Identity = 129/154 (83.77%), Postives = 137/154 (88.96%), Query Frame = 0
Query: 1 METPRLLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESAT 60
MET RLL+ LLLL FAAAA EAA +RRPGFLFSRTRGRCTP+FWSS REAWPRMAPESAT
Sbjct: 1 MET-RLLSFLLLLYFAAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESAT 60
Query: 61 VAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGRVVKEATAALLNSYARRREFPY 120
VAKIFGSRAHERYGSEMTL+ AA A +EEEEAFGRVVKEATAALLNSYA RR+FPY
Sbjct: 61 VAKIFGSRAHERYGSEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYA-RRDFPY 120
Query: 121 SAWEVKTLFIKALVSKEAAALQSQRFALANQLCN 151
+AWEVKTL IKALVSKEAAALQSQRFA AN+ CN
Sbjct: 121 AAWEVKTLLIKALVSKEAAALQSQRFAFANESCN 152
BLAST of Spg014220 vs. ExPASy TrEMBL
Match:
A0A6J1GR22 (uncharacterized protein LOC111456270 OS=Cucurbita moschata OX=3662 GN=LOC111456270 PE=4 SV=1)
HSP 1 Score: 231.9 bits (590), Expect = 1.8e-57
Identity = 129/155 (83.23%), Postives = 137/155 (88.39%), Query Frame = 0
Query: 1 METPRLLNLLLLLCFA-AAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESA 60
MET RLL+ LLLL FA AAA EAA +RRPGFLFSRTRGRCTP+FWSS REAWPRMAPESA
Sbjct: 1 METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESA 60
Query: 61 TVAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGRVVKEATAALLNSYARRREFP 120
TVAKIFGSRAHERYGSEMTL+ AA A +EEEEAFGRVVKEATAALLNSYA RR+FP
Sbjct: 61 TVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGRVVKEATAALLNSYA-RRDFP 120
Query: 121 YSAWEVKTLFIKALVSKEAAALQSQRFALANQLCN 151
Y+AWEVKTL IKALVSKEAAALQSQRFA AN+ CN
Sbjct: 121 YAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN 154
BLAST of Spg014220 vs. ExPASy TrEMBL
Match:
A0A6J1CRA8 (uncharacterized protein LOC111013459 OS=Momordica charantia OX=3673 GN=LOC111013459 PE=4 SV=1)
HSP 1 Score: 226.9 bits (577), Expect = 5.7e-56
Identity = 124/152 (81.58%), Postives = 132/152 (86.84%), Query Frame = 0
Query: 1 METPRLLNLLLLLCFAAA--AAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPES 60
METPR LNLLLLLCFA + A AAS RRPGFLFSR RGRCT QFWSS REAWPRMAPE+
Sbjct: 1 METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPET 60
Query: 61 ATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEATAALLNSYARRREFPYSA 120
ATVAK+FGSRA ERYGSEMTLMEAAA A +EAFGR+VKEATAALLNSY RREFP SA
Sbjct: 61 ATVAKVFGSRARERYGSEMTLMEAAATA--RDEAFGRLVKEATAALLNSYG-RREFPLSA 120
Query: 121 WEVKTLFIKALVSKEAAALQSQRFALANQLCN 151
WEVKTL IKALVS+EAAALQSQRFA+AN +CN
Sbjct: 121 WEVKTLLIKALVSEEAAALQSQRFAVANDICN 149
BLAST of Spg014220 vs. ExPASy TrEMBL
Match:
A0A5A7UZL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00680 PE=4 SV=1)
HSP 1 Score: 219.9 bits (559), Expect = 7.0e-54
Identity = 122/149 (81.88%), Postives = 126/149 (84.56%), Query Frame = 0
Query: 1 METPRLLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESAT 60
M++ L LLLLL F AAAAE AS R PGFLFSRT GRCT QFWSS EAWPRMAPESAT
Sbjct: 1 MDSSPFLTLLLLLSF-AAAAEVASARPPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESAT 60
Query: 61 VAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEATAALLNSYARRREFPYSAWE 120
VAKIFGSRA ERYGSEMTLMEAA A EEE FGRVVKEATAALLNSYARRR+FPYSAWE
Sbjct: 61 VAKIFGSRARERYGSEMTLMEAAGGA--EEEVFGRVVKEATAALLNSYARRRDFPYSAWE 120
Query: 121 VKTLFIKALVSKEAAALQSQRFALANQLC 150
VKTL IKALVSKEAA LQSQRFA AN+ C
Sbjct: 121 VKTLLIKALVSKEAAVLQSQRFAFANESC 146
BLAST of Spg014220 vs. TAIR 10
Match:
AT2G20515.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; Has 71 Blast hits to 71 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 144.1 bits (362), Expect = 9.4e-35
Identity = 78/146 (53.42%), Postives = 105/146 (71.92%), Query Frame = 0
Query: 6 LLNLLLLLCFAAAAAEAASTRRPGFLFSRTRGRCTPQFWSSGREAWPRMAPESATVAKIF 65
+L LLCF A + A RPGF+++R RGRCTPQ+WSS REAWPRM PE +TV KIF
Sbjct: 14 VLVTFFLLCFFAGDSSAT---RPGFIYTRHRGRCTPQYWSSQREAWPRMVPERSTVEKIF 73
Query: 66 GSR-AHERYGSEMTLMEAAAAADEEEEAFGRVVKEATAALLNSYARRREFPYSAWEVKTL 125
G A ER+ S++TL+E+ A DEE A+G ++K+ AAL+NSYA R+ F Y+ WEVKT+
Sbjct: 74 GVMVAKERWRSDLTLVESTARNDEEGNAYGALLKQGIAALINSYA-RKSFSYAPWEVKTM 133
Query: 126 FIKALVSKEAAALQSQRFALANQLCN 151
I+A+VS+ AA Q++ FA+AN C+
Sbjct: 134 LIQAMVSESAARRQAEHFAVANVACD 155
BLAST of Spg014220 vs. TAIR 10
Match:
AT2G16630.1 (Pollen Ole e 1 allergen and extensin family protein )
HSP 1 Score: 45.1 bits (105), Expect = 5.9e-05
Identity = 41/112 (36.61%), Postives = 58/112 (51.79%), Query Frame = 0
Query: 39 CTPQFWSSG--REAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRV 98
C+ Q W R W + P++ VA FG A YG++MT+ E A D EA+ +
Sbjct: 243 CSHQLWMKPEYRCYWRAIGPDT-KVAVAFGLVAGRIYGTDMTVRE---ALDGRGEAYKTL 302
Query: 99 VKEATAALLNSYARRREFPYSAWEVKTLFIKALV--SKEAAALQSQRFALAN 147
++EAT ALLNSY FPY++ V T AL+ S+ + + RF AN
Sbjct: 303 LREATTALLNSY-NSLGFPYNSVAVITYTNLALLGNSEHDVLMTAIRFIKAN 349
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038899192.1 | 1.7e-62 | 86.71 | uncharacterized protein LOC120086555 [Benincasa hispida] | [more] |
XP_004148954.1 | 1.1e-61 | 86.75 | uncharacterized protein LOC101220310 [Cucumis sativus] >KGN44734.1 hypothetical ... | [more] |
XP_022991546.1 | 1.3e-57 | 83.77 | uncharacterized protein LOC111488125 [Cucurbita maxima] | [more] |
XP_022953859.1 | 3.7e-57 | 83.23 | uncharacterized protein LOC111456270 [Cucurbita moschata] | [more] |
XP_023548905.1 | 4.1e-56 | 82.58 | uncharacterized protein LOC111807417 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K735 | 5.4e-62 | 86.75 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375760 PE=4 SV=1 | [more] |
A0A6J1JR18 | 6.1e-58 | 83.77 | uncharacterized protein LOC111488125 OS=Cucurbita maxima OX=3661 GN=LOC111488125... | [more] |
A0A6J1GR22 | 1.8e-57 | 83.23 | uncharacterized protein LOC111456270 OS=Cucurbita moschata OX=3662 GN=LOC1114562... | [more] |
A0A6J1CRA8 | 5.7e-56 | 81.58 | uncharacterized protein LOC111013459 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A5A7UZL8 | 7.0e-54 | 81.88 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
AT2G20515.1 | 9.4e-35 | 53.42 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT2G16630.1 | 5.9e-05 | 36.61 | Pollen Ole e 1 allergen and extensin family protein | [more] |