Spg014096 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg014096
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	60S ribosomal protein L38
Location	scaffold3: 37716609 .. 37719403 (-)
RNA-Seq Expression	Spg014096
Synteny	Spg014096

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCACGCTATCCATCCCTTTTCAAACCAGCAATTTTCGGTCTACATTTTTGGGAGAGAAAAATGGATTCTCTGTTTCTGCATTGCCTGTATGTCAAACTGGTCTCTTGAGGAAGACTATAGAATGCAAGGAATCATGAATAGGGAAGCAACCAATTCAAGTGCCATCCAATGTAACCATCACATTGCAGGGTCAGGATTTGAAAGTTAAGGGTCCTTTGGGAGAGCTTTCAATTCTTTATCCTCGAGTTGTTTAATATCGTCATCATTAGTTTTCAGCTCGACCACATTTATATATCAGTTGGGAAAATGGCACCAACTCCAAAAAATCGTCACCTAGTTTATAACTTGCATATTATTAAGAAAAAAAAAAAAGAATTTGATGAATGTGGTCAAGGAATTGTAATCAGTTATATGCTTCTGCTCTGTTTTGTTGAGTGTTATGGAGTAGGTTTTATGCTAATTAGATTTGCAATTCAAAAGATTCTCTATGGAGACTGCATTTAGAGGTGTTCTTGACTCCATAAAATCAATGTATGAACGGGTAGGGTTGGGCTGACCATCTGTGAACATGACCTGTAGGCTAAGTTTAGCTCACTCTATTTTGTTTCCATCCCTACTCTTATAGCATTACATTTGATAAGGCTTAGTTAAAAGTTTCTTTACTTAGTTTTTAGTTTAACAAATGTGGAGGTTTAAAATTGAAAGTTCAATCTTAGATAGAGGTAATACATTATTCTCCACATAATTATGTGTAGAATGGTAAATAAAAGGTAAATATTGGATTTTGCTTATTTTTAAAAACAATTTTAAAATTTGTGTTTTGCCCCTATTAAAATCTTGAAGCCCAGCCTAAGGAATTCATATAAATAAGAAGTTATAAGAATTAGGGTTTGCACTTCCACAATCAGAAGTACACAACATTCTCAGTTCTTCGACAATGGTGCCCACTCAAACTCTAATTCCTAATTTCATTGGATTTTCTTCAATCGATTTTTTATTTATTGTTTTCATTTTTGCCATAGCATTAGGGTTTTTCTAGTGTACATGTTATTACTCTTGCCATTTGAGTTCTGCCTAAGCTCTCTGTTTTTCGCTGCTGTTAATTTCTTGGCTCCAGGAGAGTCATCTGTAAAGTGTCAGGATCTTTTGCTTCATATCATTGGAAGATTCTGTATTTTTACCTTTGGATTTAGCTAGTTTGATTTAGATGTGATGTGATTGGTTAAGGTCTTGGGGTATTCAAGTAACTATTTGAGATGTGGAATTTTCTTCTTTAAATTCTGTGACTGTTGTATGGTCTCACTCATTTGCATATCTTGTGTTTTTTGTTATGTTATAATCAATTCTTAGCCTTTTGTTTTATATTCCAATACACAGCCGAAGCAAATTCATGAGATCAAAGATTTCCTTCTCACTGCAAGAAGGAAGGATGCTCGTTCTGTGAAAATTAAGAGGAGCAAAGATGTGGTGAAGTTCAAAGTTCGATGCTCCAAGTATCTTTATACTCTTTGTGTTTTCGACTCTGAGAAGGCAGACAAGTTGAAGCAATCTCTTCCACCAGGTTAGATTAACTTTTTCAATAACCAACACTGCAATGTTTTTAGAGTATGATATATTGGAAGTACATATAACTTTATGTTGAATATTTTTAAATGGTTAGATCAGAAGTATTTCATAATTTGTTTGTGTTTAATGATAAATTTGGAAGCAAAAGGCTAAAAACACTTACAGGTGCTTTTATCATCTGCTTATGGCTTAAATTATCCATAATCTCCTAAAACATGCCTTTCTTTACTAACTTTTTGTAAATAGACATTCTCTCACTAATCTGTCCTCTCACCAACTTCTTATTTACTTCTCACTTCCTCTCATTGGTGTCTCTTTACATAAATTTGTGTATTTGTCAAGAACTGATTGAATTTAGATGCACATGATAACTTGATAAGAATAAATTACTTAAGATTTATAAATTTGTGTCTTCCTCTAGAATTGATTGAATCTAGATCCACTTAATTAGAGTAAATCCTTTGGTAGGCTTGTCTTTTTCCATCTTTGAGAATTCGAGGTTGAAGGAACTTCAGATTTCTTGGAGGAGCTTAGAGGTTTGATATGGGGAGTTGTGGGAGGTTGTTATGTTTAATGCCTCGATATGAGCTTTGTTGGCCAAGGTCTTTTGTAATAATCGGCCACATTTCACTCTGTTGGATTTGAGTTCTTTTTTGTAGTTGTTTGCATTCCTATAGTTGGGGTTTTTTTTTTTTTTTTTTTGCTATTGTATATCTGTCATTTTTCTAAATGAAAGTCTGGTTTCTGAAAAAAAAAATTACTTGGGATGTTTTTTAAATGTTGATGAGGATGAATGCGATTACTTCTGCATTCATATTGTTGGCACATGTTATTGTACCAAACTTTTGCTCAATGAACTGAATACTGTCGATAACCTGATTTATTTTTCCATTTTGCTAGGTTTGAGTGTGCAAGATCTGTGAAAAGGTGGTTAAAGTTTCTCAAACGGTCACAAGAGGAGGAAATTAGAGTTTTTTTTGTTTCAAGGGAGTGTTTTTCCAACTATTTAGGATACGTTTAAATTTGATTTGAGCTTTGTAGTAATCCTTATTGCGTTCGTACCCAGTTGATGTTTCAGTAAAATTATCTACTCTTGTTGCTACTTCTAGACTATGTTCAAAACTTAAATCACATTGCTAACTCGACCATCGCCCACCAATTTTTGTTCAAGACTTATCTCATATTTTCACTAACGTTATATGATATTATCCACTTTATGTTA

mRNA sequence

ATGGCTTCCACGCTATCCATCCCTTTTCAAACCAGCAATTTTCGGTCTACATTTTTGGGAGAGAAAAATGGATTCTCTGTTTCTGCATTGCCTCCGAAGCAAATTCATGAGATCAAAGATTTCCTTCTCACTGCAAGAAGGAAGGATGCTCGTTCTGTGAAAATTAAGAGGAGCAAAGATGTGGTGAAGTTCAAAGTTCGATGCTCCAAGTATCTTTATACTCTTTGTGTTTTCGACTCTGAGAAGGCAGACAAGTTGAAGCAATCTCTTCCACCAGAATTCGAGGTTGAAGGAACTTCAGATTTCTTGGAGGAGCTTAGAGGTTTGATATGGGGAGTTGTGGGAGGTTTGAGTGTGCAAGATCTGTGA

Coding sequence (CDS)

ATGGCTTCCACGCTATCCATCCCTTTTCAAACCAGCAATTTTCGGTCTACATTTTTGGGAGAGAAAAATGGATTCTCTGTTTCTGCATTGCCTCCGAAGCAAATTCATGAGATCAAAGATTTCCTTCTCACTGCAAGAAGGAAGGATGCTCGTTCTGTGAAAATTAAGAGGAGCAAAGATGTGGTGAAGTTCAAAGTTCGATGCTCCAAGTATCTTTATACTCTTTGTGTTTTCGACTCTGAGAAGGCAGACAAGTTGAAGCAATCTCTTCCACCAGAATTCGAGGTTGAAGGAACTTCAGATTTCTTGGAGGAGCTTAGAGGTTTGATATGGGGAGTTGTGGGAGGTTTGAGTGTGCAAGATCTGTGA

Protein sequence

MASTLSIPFQTSNFRSTFLGEKNGFSVSALPPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPEFEVEGTSDFLEELRGLIWGVVGGLSVQDL

Homology

[Close]

BLAST of Spg014096 vs. NCBI nr
Match: RVW20725.1 (60S ribosomal protein L38 [Vitis vinifera])

HSP 1 Score: 129.8 bits (325), Expect = 1.6e-26
Identity = 66/80 (82.50%), Postives = 70/80 (87.50%), Query Frame = 0


Query: 18 FLGEKNGFSVSALPPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCV 77
          F+ +  GFS    PPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCV
Sbjct: 16 FVDKLQGFSPKT-PPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCV 75

Query: 78 FDSEKADKLKQSLPPEFEVE 98
          FD+EKADKLKQSLPP   V+
Sbjct: 76 FDAEKADKLKQSLPPGLSVQ 94

[Close]

BLAST of Spg014096 vs. NCBI nr
Match: KAG5404666.1 (hypothetical protein IGI04_010785 [Brassica rapa subsp. trilocularis])

HSP 1 Score: 129.4 bits (324), Expect = 2.1e-26
Identity = 66/83 (79.52%), Postives = 71/83 (85.54%), Query Frame = 0


Query: 10  QTSNFRSTFLGEKNGFSVSALPPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCS 69
           Q ++ R   L  K+G S  +L PKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS
Sbjct: 269 QNAHRRIDGLKGKSGISYISLRPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCS 328

Query: 70  KYLYTLCVFDSEKADKLKQSLPP 93
           KYLYTLCVFD EKADKLKQSLPP
Sbjct: 329 KYLYTLCVFDQEKADKLKQSLPP 351

[Close]

BLAST of Spg014096 vs. NCBI nr
Match: XP_024031168.1 (60S ribosomal protein L38-like [Morus notabilis])

HSP 1 Score: 129.0 bits (323), Expect = 2.7e-26
Identity = 66/82 (80.49%), Postives = 71/82 (86.59%), Query Frame = 0


Query: 16 STFLGEKNGFSVSALPPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTL 75
          S  + E +G S+ +  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTL
Sbjct: 13 SAAVAEIDGSSLFSSVPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTL 72

Query: 76 CVFDSEKADKLKQSLPPEFEVE 98
          CVFDSEKADKLKQSLPP   V+
Sbjct: 73 CVFDSEKADKLKQSLPPGLSVQ 94

[Close]

BLAST of Spg014096 vs. NCBI nr
Match: EXB88161.1 (60S ribosomal protein L38 [Morus notabilis])

HSP 1 Score: 128.6 bits (322), Expect = 3.6e-26
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 27  VSALPPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL 86
           V+ +PPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL
Sbjct: 55  VNQMPPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL 114

Query: 87  KQSLPP 93
           KQSLPP
Sbjct: 115 KQSLPP 120

[Close]

BLAST of Spg014096 vs. NCBI nr
Match: CBI36730.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 128.6 bits (322), Expect = 3.6e-26
Identity = 66/80 (82.50%), Postives = 70/80 (87.50%), Query Frame = 0


Query: 18 FLGEKNGFSVSALPPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCV 77
          F+ +  GFS    PPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCV
Sbjct: 16 FVDKLLGFSPKT-PPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCV 75

Query: 78 FDSEKADKLKQSLPPEFEVE 98
          FD+EKADKLKQSLPP   V+
Sbjct: 76 FDAEKADKLKQSLPPGLSVQ 94

[Close]

BLAST of Spg014096 vs. ExPASy Swiss-Prot
Match: O22860 (60S ribosomal protein L38 OS=Arabidopsis thaliana OX=3702 GN=RPL38A PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.7e-27
Identity = 59/66 (89.39%), Postives = 62/66 (93.94%), Query Frame = 0


Query: 32 PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 91
          PKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSLP
Sbjct: 2  PKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSLP 61

Query: 92 PEFEVE 98
          P   V+
Sbjct: 62 PGLSVQ 67

[Close]

BLAST of Spg014096 vs. ExPASy Swiss-Prot
Match: P46291 (60S ribosomal protein L38 OS=Solanum lycopersicum OX=4081 GN=RPL38 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 7.0e-25
Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 32 PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 91
          PKQIHEIKDFLLTARRKDAR+VKIK++KD+VKFKVRCSKYLYTLCV D EKADKLKQSLP
Sbjct: 2  PKQIHEIKDFLLTARRKDARTVKIKKNKDMVKFKVRCSKYLYTLCVSDFEKADKLKQSLP 61

Query: 92 PEFEVE 98
          P   V+
Sbjct: 62 PGLSVQ 67

[Close]

BLAST of Spg014096 vs. ExPASy Swiss-Prot
Match: Q95V84 (60S ribosomal protein L38 OS=Branchiostoma belcheri OX=7741 GN=RPL38 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 8.6e-23
Identity = 53/66 (80.30%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 32 PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 91
          PKQIHEIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKADKLKQSLP
Sbjct: 2  PKQIHEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKADKLKQSLP 61

Query: 92 PEFEVE 98
          P   V+
Sbjct: 62 PGLAVK 67

[Close]

BLAST of Spg014096 vs. ExPASy Swiss-Prot
Match: Q32PB9 (60S ribosomal protein L38 OS=Bos taurus OX=9913 GN=RPL38 PE=3 SV=4)

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-20
Identity = 49/66 (74.24%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 32 PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 91
          P++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSLP
Sbjct: 2  PRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLP 61

Query: 92 PEFEVE 98
          P   V+
Sbjct: 62 PGLAVK 67

[Close]

BLAST of Spg014096 vs. ExPASy Swiss-Prot
Match: P63173 (60S ribosomal protein L38 OS=Homo sapiens OX=9606 GN=RPL38 PE=1 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-20
Identity = 49/66 (74.24%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 32 PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 91
          P++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSLP
Sbjct: 2  PRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLP 61

Query: 92 PEFEVE 98
          P   V+
Sbjct: 62 PGLAVK 67

[Close]

BLAST of Spg014096 vs. ExPASy TrEMBL
Match: A0A438CBV2 (60S ribosomal protein L38 OS=Vitis vinifera OX=29760 GN=RPL38A_0 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 7.8e-27
Identity = 66/80 (82.50%), Postives = 70/80 (87.50%), Query Frame = 0


Query: 18 FLGEKNGFSVSALPPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCV 77
          F+ +  GFS    PPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCV
Sbjct: 16 FVDKLQGFSPKT-PPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCV 75

Query: 78 FDSEKADKLKQSLPPEFEVE 98
          FD+EKADKLKQSLPP   V+
Sbjct: 76 FDAEKADKLKQSLPPGLSVQ 94

[Close]

BLAST of Spg014096 vs. ExPASy TrEMBL
Match: D7U1W4 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0102g01220 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.7e-26
Identity = 66/80 (82.50%), Postives = 70/80 (87.50%), Query Frame = 0


Query: 18 FLGEKNGFSVSALPPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCV 77
          F+ +  GFS    PPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCV
Sbjct: 16 FVDKLLGFSPKT-PPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCV 75

Query: 78 FDSEKADKLKQSLPPEFEVE 98
          FD+EKADKLKQSLPP   V+
Sbjct: 76 FDAEKADKLKQSLPPGLSVQ 94

[Close]

BLAST of Spg014096 vs. ExPASy TrEMBL
Match: W9RMX2 (60S ribosomal protein L38 OS=Morus notabilis OX=981085 GN=L484_005586 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.7e-26
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 27  VSALPPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL 86
           V+ +PPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL
Sbjct: 55  VNQMPPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL 114

Query: 87  KQSLPP 93
           KQSLPP
Sbjct: 115 KQSLPP 120

[Close]

BLAST of Spg014096 vs. ExPASy TrEMBL
Match: A0A438HVN8 (60S ribosomal protein L38 OS=Vitis vinifera OX=29760 GN=RPL38A_2 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.3e-26
Identity = 66/85 (77.65%), Postives = 69/85 (81.18%), Query Frame = 0


Query: 13 NFRSTFLGEKNGFSVSALPPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYL 72
          NF      +K   S    PPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYL
Sbjct: 10 NFLHVVFVDKLQGSSPKTPPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYL 69

Query: 73 YTLCVFDSEKADKLKQSLPPEFEVE 98
          YTLCVFD+EKADKLKQSLPP   V+
Sbjct: 70 YTLCVFDAEKADKLKQSLPPGLSVQ 94

[Close]

BLAST of Spg014096 vs. ExPASy TrEMBL
Match: B9RM38 (60S ribosomal protein L38, putative OS=Ricinus communis OX=3988 GN=RCOM_1077580 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.9e-26
Identity = 64/71 (90.14%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 27 VSALPPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL 86
          +S L PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL
Sbjct: 6  LSNLQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL 65

Query: 87 KQSLPPEFEVE 98
          KQSLPP   V+
Sbjct: 66 KQSLPPGLSVQ 76

[Close]

BLAST of Spg014096 vs. TAIR 10
Match: AT2G43460.1 (Ribosomal L38e protein family )

HSP 1 Score: 121.7 bits (304), Expect = 4.1e-28
Identity = 59/66 (89.39%), Postives = 62/66 (93.94%), Query Frame = 0


Query: 32 PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 91
          PKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSLP
Sbjct: 2  PKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSLP 61

Query: 92 PEFEVE 98
          P   V+
Sbjct: 62 PGLSVQ 67

[Close]

BLAST of Spg014096 vs. TAIR 10
Match: AT3G59540.1 (Ribosomal L38e protein family )

HSP 1 Score: 121.7 bits (304), Expect = 4.1e-28
Identity = 59/66 (89.39%), Postives = 62/66 (93.94%), Query Frame = 0


Query: 32 PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 91
          PKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSLP
Sbjct: 2  PKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSLP 61

Query: 92 PEFEVE 98
          P   V+
Sbjct: 62 PGLSVQ 67

The following BLAST results are available for this feature:

BLAST of Spg014096 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW20725.1	1.6e-26	82.50	60S ribosomal protein L38 [Vitis vinifera]	[more]
KAG5404666.1	2.1e-26	79.52	hypothetical protein IGI04_010785 [Brassica rapa subsp. trilocularis]	[more]
XP_024031168.1	2.7e-26	80.49	60S ribosomal protein L38-like [Morus notabilis]	[more]
EXB88161.1	3.6e-26	95.45	60S ribosomal protein L38 [Morus notabilis]	[more]
CBI36730.3	3.6e-26	82.50	unnamed protein product, partial [Vitis vinifera]	[more]

BLAST of Spg014096 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22860	5.7e-27	89.39	60S ribosomal protein L38 OS=Arabidopsis thaliana OX=3702 GN=RPL38A PE=3 SV=1	[more]
P46291	7.0e-25	84.85	60S ribosomal protein L38 OS=Solanum lycopersicum OX=4081 GN=RPL38 PE=3 SV=1	[more]
Q95V84	8.6e-23	80.30	60S ribosomal protein L38 OS=Branchiostoma belcheri OX=7741 GN=RPL38 PE=3 SV=1	[more]
Q32PB9	1.4e-20	74.24	60S ribosomal protein L38 OS=Bos taurus OX=9913 GN=RPL38 PE=3 SV=4	[more]
P63173	1.4e-20	74.24	60S ribosomal protein L38 OS=Homo sapiens OX=9606 GN=RPL38 PE=1 SV=2	[more]

BLAST of Spg014096 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438CBV2	7.8e-27	82.50	60S ribosomal protein L38 OS=Vitis vinifera OX=29760 GN=RPL38A_0 PE=3 SV=1	[more]
D7U1W4	1.7e-26	82.50	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0102g01220 PE=3 SV=...	[more]
W9RMX2	1.7e-26	95.45	60S ribosomal protein L38 OS=Morus notabilis OX=981085 GN=L484_005586 PE=3 SV=1	[more]
A0A438HVN8	2.3e-26	77.65	60S ribosomal protein L38 OS=Vitis vinifera OX=29760 GN=RPL38A_2 PE=3 SV=1	[more]
B9RM38	3.9e-26	90.14	60S ribosomal protein L38, putative OS=Ricinus communis OX=3988 GN=RCOM_1077580 ...	[more]

BLAST of Spg014096 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43460.1	4.1e-28	89.39	Ribosomal L38e protein family	[more]
AT3G59540.1	4.1e-28	89.39	Ribosomal L38e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038464	Ribosomal protein L38e superfamily	GENE3D	3.30.720.90		coord: 32..99 e-value: 6.8E-33 score: 114.6
IPR002675	Ribosomal protein L38e	PFAM	PF01781	Ribosomal_L38e	coord: 32..97 e-value: 1.2E-32 score: 111.8
IPR002675	Ribosomal protein L38e	PANTHER	PTHR10965	60S RIBOSOMAL PROTEIN L38	coord: 28..97
None	No IPR available	PANTHER	PTHR10965:SF17	BNACNNG77070D PROTEIN	coord: 28..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg014096.1	Spg014096.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022618	ribonucleoprotein complex assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome