Spg013998 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg013998
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	SKP1-like protein
Location	scaffold3: 32029773 .. 32033360 (-)
RNA-Seq Expression	Spg013998
Synteny	Spg013998

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGAATCTTTCCAATCGTCGGTTGTCAGTTAGGGTTTCTCTATTTTTTCCAATCGGAAACACAACCATCCAAAAATTCCCTCAGCACAATGTCGTCGTCGAAGAAGATCGTCCTCAAGAGTTCCGACGGCGAAACCTTCGACATTGACGAAGCCGTCGCCCTCGAGTCTCAGACCATCAAGCACATGATCGAGGACGATTGCGCCGACACTGTCATCCCCTTGCCCAATGTCAGCAGTTCCATTCTTGCTAAGGTAATTGAGTACTGTAAGAAGCATGTCGAGACTGATGATAAGGATTCTAAAGCCGTCGATGATACTCTCAAAGCTTGGGACGCTGAATTTGTCAAGGTCGATCAGAATACCCTCTTCGATCTCATCTTGGTGAGTTTCCTTTTTTTTTTTTTGCTTCTGTTTTTGGTTCTCTTTCTTTTGTTATTGGTTTTTATCGTTTTTGGAATTAGTGGAGTGACTGGTTAATACATAAATTTGTTGTTGCTGATCTTCTGTTGATAATTTGGGGCTTTTTGATTATTTGTGGCGTGTAATCTGATGGTGTTAGTAAGGAATTCTTGTATTCGACAGGCTCTGTCCTTTTTCTCCTTCTCTCTTCTACAAAATTGCCTATCTCGAATTTGTGTTTTGATAGTTTCTCTTTTGCCATACGAAATCGATATATGATCTTGCTTCCTTGTTAGACAGAAGCAAAGAATTGCAGATTACTGTGAATTAGTGAATTACTTTGTTGATCATGTTTATTTGGTATGCTATATTAGGCTGTTTATTCTAGGATGATTTAGTCCAATTGGGCCTTCCTCTAAATTTGATGATTATTGACTCAATTAACCATCTTGAATTTACTTATAATGTCTTCTAAACTTGATGATTATTAGGGTGAAAAGTGGTTTTAGCCCATTAAAATTTCCCCCAAGTTTTTAAGTGCTTAGGAGGAGCCTTAATGCTTCTTTCAAAAGTGGAATGCCTCACTTGTAAGTATATGCTAGAGTAGAGGATTTTCACGATATTGTTTTCCAACCTGATTTTGACATTCAACTACGTTATATATCCTGTGTCTTGGGCTTTTGGTCATCCCAAGATCCTTTAACATAAGAAGCTATTGGTTGCTTTCCCAGTTCTTCAAATTACCTTACTTTCTGTAACTCAGATCCGTTGCCTAAATTCTCTGTATTTGGGGCTTTTCTTTGCTGCTTATGGATAATGGATGTGTGTTTTGCTATCCCCAATTCATTCAGGCTGCTAACTACCTGAACATCAAGAGCCTGCTGGATCTCACATGCCAGACTGTGGCCGACATGATCAAAGGAAAGACTCCAGAGGAAATTCGAAAGACGTTCAACATCAAGAATGATTTCACTCCAGAGGAGGAAGAGGAGGTTCGTAGGGAGAATCAATGGGCCTTCGAGTAAAACTCGATTCATTTAGCTGGTTCAATAGCAATGTCTATAGATTTTAGGGGAGTAGGGATTGTCACTTTATGGGATGATTTAGACCTTTATCTGTTATCTAAGATTAATATCTGAGTTTCAATGAAATTCTTCAACTCTTCTAATGGTTAATGCCTCGAGATATATATCATCTTTAGAAGGATTGTATTCTAAATTTACTTTTAAAAAACTGGAGGCTAATAATGGTAACCATTAAAACTTTGTGAGAAAGTATAGACCCTCCATTAGGATAATTGGATTGATGGGGAAAAATAGAGGAAGTAAGTTGATTTTTTCTACAAATCTTATCATTTTATCGGATAAAATACATTTCAATTGTTTGAGATTTATGAAATAGGGCTATTAGTCCGTATTCTGTTAATTACTTAGCATGTGGCAACGTTTTAAAATAAAATAATATATTTATTATTATTATTATTATTTATTTTATTTTAACCTTTTTTTTAAAAAAAAAAAAAAAAAAAAACCCACCCTACAAGGAAACCTTTGAAAGCTTAAATAAGGGAGCCTCAAAGGAACACTACGGTTGATATAGAAAATATAGTTTGGTGTCAAATTTTGATAAATTTTCAAGGTGAACATCTTTCTATTATCAATGGTCAAGAACTTTTTAAAAATCATTTTTAAACTTTAAACTTTGATGACTGACAAATCTCATTTATGAGTGTTATTCAACCTCTAAAAACATTTTTTTTTTTTGAGTTCATCAACATTTTGGAGTGAGGGGGATTCGAATATCCGACCTCCTGATTGAGGATACATGGCAATTACCGCTGATAATTTTTGGGGAGATTTCTGAAACAAACGTTATTGGGTGTAAATAGTGTAAATAGAGTCATTCTTCCCTTTCTCCGATCATAAAGCCCCTTGAACCCTTTCTCTTTCTTTGTCTTTCATCCTGTTCATCCTATACAAAAAGTTAAGTGAGATCCTGTTCTTTCTAATTCAAAAAAGAAAAGAGGGGTGGTTTGAAGCGGCGAACGCCTATGCTAAAGTAAGAAAGAAAGATAGTCAAGGTTACGAAGTCACTTAGTCGAACTATAAAGAAAGGGAGTCCCAGGTTACGAAGTAAGGTCAGTTGGTTAAGGAAAGCTCAGGTTATGAAATCGTTTAGCCGTTAATTAATTAAGTAGTAATGAGGCGTCAATACGGAGTTGCATCAGCTGTAGATATAGACTAGGCTAAGGGACAGATTGAATCCCTTCTTCTATTCTCTTTACTTACACCTTACACTTCGACTGAGTCTAACAAGGCTCAAGTGCAGAACCTTCCATTGTGGACCGCGACTACAAAGGTGTTTGAATCTGGAAATCCCAAGCATACCCAGGAAGTCTGGGCCCGCACGGCTACTGCTCCAAACATAGGACGACATTATTATAAGGCCTTGGAATTATATGCTTAATTATCTAAGGTCACATTAGCTATAGAAATATAGGTTTAATGACTTAGACTCTTAAAAGTATCTCATAAAAGGAAAAATAAGAGGTAAATTTGATCCATAATGCAAGATGCTGTGAAACAGCCTTGCTGTCGCATAGTCTAGCAACATAGTAGAAACAAATATAAATATGAATCCCTCTTTTCCATCACTAATTTAGTTTGAACGCATTGATATTAATTTGGTTAAAATATCATTTTGGTCTATGTAATTTGAGTCTCATCCCATTTAAGAGGAGTACATGCCAATACTAAATATTATTTTATTATTTTATATTTGTAAATATATTCTAATTATTTTCTTATCCTATATATATATATATATATATATATATATATGTTATGGGTAATTTTGGACCATTTCGATGTACAAGGAGTTGATGAGGACAACCCGACACGAGCCCAAAAATAGGACCAGAAAACGGACTCTGGAGGCGAAACAGGCCAGAGGGTTGGGCCAAGGTCGGAGGGACTGGGCCTTGGCCCGACCCCTGCTCGGCCTCGGCCTCGTCCACTCACGTGGGCCGGGTCTTTTCGCCTCCGTTTGGTCCCTGGTGCCTCTGGCCGTCCCGGTTCCACCTGGTTCAGCCCGAATCGCCTCCGAACGCCTAAAAATCCTAGAGGAGGAACGAGTATTTAAACTCTTATTCGTCACTGAAGAGGGGATCATGAAACTCATTCCCTGA

mRNA sequence

ATGTCGTCGTCGAAGAAGATCGTCCTCAAGAGTTCCGACGGCGAAACCTTCGACATTGACGAAGCCGTCGCCCTCGAGTCTCAGACCATCAAGCACATGATCGAGGACGATTGCGCCGACACTGTCATCCCCTTGCCCAATGTCAGCAGTTCCATTCTTGCTAAGGTAATTGAGTACTGTAAGAAGCATGTCGAGACTGATGATAAGGATTCTAAAGCCGTCGATGATACTCTCAAAGCTTGGGACGCTGAATTTGTCAAGGTCGATCAGAATACCCTCTTCGATCTCATCTTGAAGCAAAGAATTGCAGATTACTGTGAATTAGTGAATTACTTTGTTGATCATGTTTATTTGGCTGCTAACTACCTGAACATCAAGAGCCTGCTGGATCTCACATGCCAGACTGTGGCCGACATGATCAAAGGAAAGACTCCAGAGGAAATTCGAAAGACGTTCAACATCAAGAATGATTTCACTCCAGAGGAGGAAGAGGAGGTTCGTAGGGAGAATCAATGGGCCTTCGAGACCAGAAAACGGACTCTGGAGGCGAAACAGGCCAGAGGGTTGGGCCAAGGTCGGAGGGACTGGGCCTTGGCCCGACCCCTGCTCGGCCTCGGCCTCGTCCACTCACGTGGGCCGGGTCTTTTCGCCTCCGTTTGGTCCCTGGTGCCTCTGGCCGTCCCGGTTCCACCTGGTTCAGCCCGAATCGCCTCCGAACGCCTAAAAATCCTAGAGGAGGAACGAGTATTTAAACTCTTATTCGTCACTGAAGAGGGGATCATGAAACTCATTCCCTGA

Coding sequence (CDS)

ATGTCGTCGTCGAAGAAGATCGTCCTCAAGAGTTCCGACGGCGAAACCTTCGACATTGACGAAGCCGTCGCCCTCGAGTCTCAGACCATCAAGCACATGATCGAGGACGATTGCGCCGACACTGTCATCCCCTTGCCCAATGTCAGCAGTTCCATTCTTGCTAAGGTAATTGAGTACTGTAAGAAGCATGTCGAGACTGATGATAAGGATTCTAAAGCCGTCGATGATACTCTCAAAGCTTGGGACGCTGAATTTGTCAAGGTCGATCAGAATACCCTCTTCGATCTCATCTTGAAGCAAAGAATTGCAGATTACTGTGAATTAGTGAATTACTTTGTTGATCATGTTTATTTGGCTGCTAACTACCTGAACATCAAGAGCCTGCTGGATCTCACATGCCAGACTGTGGCCGACATGATCAAAGGAAAGACTCCAGAGGAAATTCGAAAGACGTTCAACATCAAGAATGATTTCACTCCAGAGGAGGAAGAGGAGGTTCGTAGGGAGAATCAATGGGCCTTCGAGACCAGAAAACGGACTCTGGAGGCGAAACAGGCCAGAGGGTTGGGCCAAGGTCGGAGGGACTGGGCCTTGGCCCGACCCCTGCTCGGCCTCGGCCTCGTCCACTCACGTGGGCCGGGTCTTTTCGCCTCCGTTTGGTCCCTGGTGCCTCTGGCCGTCCCGGTTCCACCTGGTTCAGCCCGAATCGCCTCCGAACGCCTAAAAATCCTAGAGGAGGAACGAGTATTTAAACTCTTATTCGTCACTGAAGAGGGGATCATGAAACTCATTCCCTGA

Protein sequence

MSSSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYCKKHVETDDKDSKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVNYFVDHVYLAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFETRKRTLEAKQARGLGQGRRDWALARPLLGLGLVHSRGPGLFASVWSLVPLAVPVPPGSARIASERLKILEEERVFKLLFVTEEGIMKLIP

Homology

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BLAST of Spg013998 vs. NCBI nr
Match: XP_004144851.1 (SKP1-like protein 1B [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 3.0e-70
Identity = 144/175 (82.29%), Postives = 151/175 (86.29%), Query Frame = 0


Query: 1   MSSSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYC 60
           MSSSKKIVL+SSDGETFD+DE VA+ESQTIKHMIEDDCADTVIPLPNV+S+IL+KVIEYC
Sbjct: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCADTVIPLPNVTSAILSKVIEYC 60

Query: 61  KKHVETDDKDSKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVNYFVDHVYLAA 120
           K HVETDDKDSK +DDTLK WDAEFVKVDQNTLFDLI                    LAA
Sbjct: 61  KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLI--------------------LAA 120

Query: 121 NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 176
           NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

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BLAST of Spg013998 vs. NCBI nr
Match: XP_022135870.1 (SKP1-like protein 1B [Momordica charantia])

HSP 1 Score: 275.4 bits (703), Expect = 5.1e-70
Identity = 144/175 (82.29%), Postives = 152/175 (86.86%), Query Frame = 0


Query: 1   MSSSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYC 60
           MSSSKKIVLKSSDGETF+++EAVA+ESQTIKHMIEDDCAD VIPLPNV+S+ILAKVIEYC
Sbjct: 1   MSSSKKIVLKSSDGETFEVEEAVAVESQTIKHMIEDDCADNVIPLPNVNSAILAKVIEYC 60

Query: 61  KKHVETDDKDSKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVNYFVDHVYLAA 120
           KKHVETDDKDSKAVDD+LK WDAE+VKVDQNTLFDLI                    LAA
Sbjct: 61  KKHVETDDKDSKAVDDSLKTWDAEYVKVDQNTLFDLI--------------------LAA 120

Query: 121 NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 176
           NYLNIK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 NYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

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BLAST of Spg013998 vs. NCBI nr
Match: XP_008447950.1 (PREDICTED: SKP1-like protein 1B [Cucumis melo] >KAA0049758.1 SKP1-like protein 1B [Cucumis melo var. makuwa] >TYK12120.1 SKP1-like protein 1B [Cucumis melo var. makuwa])

HSP 1 Score: 274.2 bits (700), Expect = 1.1e-69
Identity = 142/175 (81.14%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 1   MSSSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYC 60
           MSSSKKIVL+SSDGETFD+DE VA+ESQTIKHMIEDDC DTVIPLPNV+S+IL+KV+EYC
Sbjct: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 60

Query: 61  KKHVETDDKDSKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVNYFVDHVYLAA 120
           K HVETDDKDSK +DDTLK WDAEFVKVDQNTLFDLI                    LAA
Sbjct: 61  KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLI--------------------LAA 120

Query: 121 NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 176
           NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

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BLAST of Spg013998 vs. NCBI nr
Match: KAG7015279.1 (SKP1-like protein 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268.1 bits (684), Expect = 8.2e-68
Identity = 143/175 (81.71%), Postives = 149/175 (85.14%), Query Frame = 0


Query: 1   MSSSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYC 60
           MSSSK IVL+SSDGE F +DEAVALESQTIKHMIEDDCADTVIP+PNV+ SILAKVIEYC
Sbjct: 1   MSSSKMIVLRSSDGEIFHMDEAVALESQTIKHMIEDDCADTVIPVPNVTGSILAKVIEYC 60

Query: 61  KKHVETDDKDSKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVNYFVDHVYLAA 120
           KKHVETD KDSKA+DDTLKAWDAEFVKVDQN LFDLI                    LAA
Sbjct: 61  KKHVETDAKDSKALDDTLKAWDAEFVKVDQNILFDLI--------------------LAA 120

Query: 121 NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 176
           NYL+IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 NYLDIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

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BLAST of Spg013998 vs. NCBI nr
Match: XP_023529806.1 (SKP1-like protein 1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 267.7 bits (683), Expect = 1.1e-67
Identity = 143/175 (81.71%), Postives = 149/175 (85.14%), Query Frame = 0


Query: 1   MSSSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYC 60
           MSSSK I+L+SSDGETF IDEAVALESQTIKHMIEDDCADTVIP+PNV+ SILA VIEYC
Sbjct: 1   MSSSKVILLRSSDGETFHIDEAVALESQTIKHMIEDDCADTVIPVPNVTGSILAMVIEYC 60

Query: 61  KKHVETDDKDSKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVNYFVDHVYLAA 120
           KKHVETD KDSKA+DDTLKAWDAEFVKVDQN LFDLI                    LAA
Sbjct: 61  KKHVETDAKDSKALDDTLKAWDAEFVKVDQNILFDLI--------------------LAA 120

Query: 121 NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 176
           NYL+IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 NYLDIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

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BLAST of Spg013998 vs. ExPASy Swiss-Prot
Match: Q9FHW7 (SKP1-like protein 1B OS=Arabidopsis thaliana OX=3702 GN=SKP1B PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.8e-60
Identity = 128/191 (67.02%), Postives = 139/191 (72.77%), Query Frame = 0


Query: 1   MSSSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYC 60
           MS+ +KI LKSSDGE F+IDEAVALESQTIKHMIEDDC D  IPLPNV+S IL+KVIEYC
Sbjct: 1   MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60

Query: 61  KKHVETDDKD----------------SKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIAD 120
           K+HVE  +K                 S + D+ LK WD+EF+KVDQ TLFDLI       
Sbjct: 61  KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLI------- 120

Query: 121 YCELVNYFVDHVYLAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEE 176
                        LAANYLNIK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEE
Sbjct: 121 -------------LAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEE 171

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BLAST of Spg013998 vs. ExPASy Swiss-Prot
Match: Q39255 (SKP1-like protein 1A OS=Arabidopsis thaliana OX=3702 GN=SKP1A PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.5e-60
Identity = 124/179 (69.27%), Postives = 140/179 (78.21%), Query Frame = 0


Query: 3   SSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYCKK 62
           S+KKIVLKSSDGE+F+++EAVALESQTI HM+EDDC D  +PLPNV+S ILAKVIEYCK+
Sbjct: 2   SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61

Query: 63  HVETDDKDSKAV------DDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVNYFVDHV 122
           HVE     ++AV      DD LKAWDA+F+K+DQ TLF+LI                   
Sbjct: 62  HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELI------------------- 121

Query: 123 YLAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 176
            LAANYLNIK+LLDLTCQTVADMIKGKTPEEIR TFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 122 -LAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160

[Close]

BLAST of Spg013998 vs. ExPASy Swiss-Prot
Match: Q6PL11 (SKP1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP1 PE=1 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.0e-56
Identity = 124/186 (66.67%), Postives = 133/186 (71.51%), Query Frame = 0


Query: 5   KKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYCKKHV 64
           K I LKSSDGE F+++EAVA+ESQTI+HMIEDDCAD  IPLPNV+S IL+KVIEYC KHV
Sbjct: 8   KMITLKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHV 67

Query: 65  E-TDDKDSKAVDDT--------------LKAWDAEFVKVDQNTLFDLILKQRIADYCELV 124
                  SKA DD               LK WDA+FVKVDQ TLFDLI            
Sbjct: 68  HAAAAAASKAADDAASAAAAVPPPSGEDLKNWDADFVKVDQATLFDLI------------ 127

Query: 125 NYFVDHVYLAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRE 176
                   LAANYLNIK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEE+RRE
Sbjct: 128 --------LAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRE 173

[Close]

BLAST of Spg013998 vs. ExPASy Swiss-Prot
Match: Q651E8 (SKP1-like protein 20 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP20 PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.8e-55
Identity = 122/185 (65.95%), Postives = 135/185 (72.97%), Query Frame = 0


Query: 7   IVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYCKKHVE- 66
           I L+S +G+ F++ EAVA+ESQTI+HMIED CADT IPLPNVS+ IL+KVIEYC KHVE 
Sbjct: 11  ITLRSCEGQVFEVAEAVAMESQTIRHMIEDKCADTGIPLPNVSAKILSKVIEYCSKHVEA 70

Query: 67  ------TDDKD---------SKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVN 126
                   D D         +KAV+D LK +DAEFVKVDQ+TLFDLI             
Sbjct: 71  RGGAAAAADGDAPAPAAVEANKAVEDELKTFDAEFVKVDQSTLFDLI------------- 130

Query: 127 YFVDHVYLAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRREN 176
                  LAANYLNIK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRREN
Sbjct: 131 -------LAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRREN 175

[Close]

BLAST of Spg013998 vs. ExPASy Swiss-Prot
Match: Q9LNT9 (SKP1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=ASK4 PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.9e-52
Identity = 114/180 (63.33%), Postives = 132/180 (73.33%), Query Frame = 0


Query: 3   SSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYCKK 62
           + K I+LKSSDGE+F+I+EAVA++SQTIKHMIEDDCAD  IPLPNV+ +ILAKVIEYCKK
Sbjct: 4   TKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKK 63

Query: 63  HVET-----DDKD--SKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVNYFVDH 122
           HVE       DKD    A +D LK WD+EFVKVDQ TLFDLI                  
Sbjct: 64  HVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLI------------------ 123

Query: 123 VYLAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 176
             LAANYLNI  LLDLTC+ VAD ++GKTPE++R  FNIKND+TPEEE EVR EN+WAFE
Sbjct: 124 --LAANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163

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BLAST of Spg013998 vs. ExPASy TrEMBL
Match: A0A0A0K4P4 (SKP1-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G012950 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 1.5e-70
Identity = 144/175 (82.29%), Postives = 151/175 (86.29%), Query Frame = 0


Query: 1   MSSSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYC 60
           MSSSKKIVL+SSDGETFD+DE VA+ESQTIKHMIEDDCADTVIPLPNV+S+IL+KVIEYC
Sbjct: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCADTVIPLPNVTSAILSKVIEYC 60

Query: 61  KKHVETDDKDSKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVNYFVDHVYLAA 120
           K HVETDDKDSK +DDTLK WDAEFVKVDQNTLFDLI                    LAA
Sbjct: 61  KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLI--------------------LAA 120

Query: 121 NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 176
           NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]

BLAST of Spg013998 vs. ExPASy TrEMBL
Match: A0A6J1C297 (SKP1-like protein OS=Momordica charantia OX=3673 GN=LOC111007712 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.5e-70
Identity = 144/175 (82.29%), Postives = 152/175 (86.86%), Query Frame = 0


Query: 1   MSSSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYC 60
           MSSSKKIVLKSSDGETF+++EAVA+ESQTIKHMIEDDCAD VIPLPNV+S+ILAKVIEYC
Sbjct: 1   MSSSKKIVLKSSDGETFEVEEAVAVESQTIKHMIEDDCADNVIPLPNVNSAILAKVIEYC 60

Query: 61  KKHVETDDKDSKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVNYFVDHVYLAA 120
           KKHVETDDKDSKAVDD+LK WDAE+VKVDQNTLFDLI                    LAA
Sbjct: 61  KKHVETDDKDSKAVDDSLKTWDAEYVKVDQNTLFDLI--------------------LAA 120

Query: 121 NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 176
           NYLNIK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 NYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]

BLAST of Spg013998 vs. ExPASy TrEMBL
Match: A0A5A7U3D8 (SKP1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00540 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 5.5e-70
Identity = 142/175 (81.14%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 1   MSSSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYC 60
           MSSSKKIVL+SSDGETFD+DE VA+ESQTIKHMIEDDC DTVIPLPNV+S+IL+KV+EYC
Sbjct: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 60

Query: 61  KKHVETDDKDSKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVNYFVDHVYLAA 120
           K HVETDDKDSK +DDTLK WDAEFVKVDQNTLFDLI                    LAA
Sbjct: 61  KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLI--------------------LAA 120

Query: 121 NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 176
           NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]

BLAST of Spg013998 vs. ExPASy TrEMBL
Match: A0A1S3BI15 (SKP1-like protein OS=Cucumis melo OX=3656 GN=LOC103490282 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 5.5e-70
Identity = 142/175 (81.14%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 1   MSSSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYC 60
           MSSSKKIVL+SSDGETFD+DE VA+ESQTIKHMIEDDC DTVIPLPNV+S+IL+KV+EYC
Sbjct: 1   MSSSKKIVLRSSDGETFDVDEIVAVESQTIKHMIEDDCVDTVIPLPNVTSAILSKVVEYC 60

Query: 61  KKHVETDDKDSKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVNYFVDHVYLAA 120
           K HVETDDKDSK +DDTLK WDAEFVKVDQNTLFDLI                    LAA
Sbjct: 61  KMHVETDDKDSKVIDDTLKTWDAEFVKVDQNTLFDLI--------------------LAA 120

Query: 121 NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 176
           NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]

BLAST of Spg013998 vs. ExPASy TrEMBL
Match: A0A6J1EKE0 (SKP1-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435156 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 5.2e-68
Identity = 143/175 (81.71%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 1   MSSSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYC 60
           MSSSK IVL+SSDGETF IDEAVALESQTIK+MIEDDCADTVIP+PNV+ SILA+VIEYC
Sbjct: 1   MSSSKVIVLRSSDGETFHIDEAVALESQTIKYMIEDDCADTVIPVPNVTGSILARVIEYC 60

Query: 61  KKHVETDDKDSKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVNYFVDHVYLAA 120
           KKHVETD KDSKA+DDTLKAWDAEFVKVDQN LFDLI                    LAA
Sbjct: 61  KKHVETDAKDSKALDDTLKAWDAEFVKVDQNILFDLI--------------------LAA 120

Query: 121 NYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 176
           NYL+IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 121 NYLDIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155

[Close]

BLAST of Spg013998 vs. TAIR 10
Match: AT5G42190.1 (E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein )

HSP 1 Score: 233.0 bits (593), Expect = 2.7e-61
Identity = 128/191 (67.02%), Postives = 139/191 (72.77%), Query Frame = 0


Query: 1   MSSSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYC 60
           MS+ +KI LKSSDGE F+IDEAVALESQTIKHMIEDDC D  IPLPNV+S IL+KVIEYC
Sbjct: 1   MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60

Query: 61  KKHVETDDKD----------------SKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIAD 120
           K+HVE  +K                 S + D+ LK WD+EF+KVDQ TLFDLI       
Sbjct: 61  KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLI------- 120

Query: 121 YCELVNYFVDHVYLAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEE 176
                        LAANYLNIK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEE
Sbjct: 121 -------------LAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEE 171

[Close]

BLAST of Spg013998 vs. TAIR 10
Match: AT1G75950.1 (S phase kinase-associated protein 1 )

HSP 1 Score: 232.3 bits (591), Expect = 4.6e-61
Identity = 124/179 (69.27%), Postives = 140/179 (78.21%), Query Frame = 0


Query: 3   SSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYCKK 62
           S+KKIVLKSSDGE+F+++EAVALESQTI HM+EDDC D  +PLPNV+S ILAKVIEYCK+
Sbjct: 2   SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61

Query: 63  HVETDDKDSKAV------DDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVNYFVDHV 122
           HVE     ++AV      DD LKAWDA+F+K+DQ TLF+LI                   
Sbjct: 62  HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELI------------------- 121

Query: 123 YLAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 176
            LAANYLNIK+LLDLTCQTVADMIKGKTPEEIR TFNIKNDFTPEEEEEVRRENQWAFE
Sbjct: 122 -LAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160

[Close]

BLAST of Spg013998 vs. TAIR 10
Match: AT1G20140.1 (SKP1-like 4 )

HSP 1 Score: 206.8 bits (525), Expect = 2.1e-53
Identity = 114/180 (63.33%), Postives = 132/180 (73.33%), Query Frame = 0


Query: 3   SSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYCKK 62
           + K I+LKSSDGE+F+I+EAVA++SQTIKHMIEDDCAD  IPLPNV+ +ILAKVIEYCKK
Sbjct: 4   TKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKK 63

Query: 63  HVET-----DDKD--SKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVNYFVDH 122
           HVE       DKD    A +D LK WD+EFVKVDQ TLFDLI                  
Sbjct: 64  HVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLI------------------ 123

Query: 123 VYLAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 176
             LAANYLNI  LLDLTC+ VAD ++GKTPE++R  FNIKND+TPEEE EVR EN+WAFE
Sbjct: 124 --LAANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163

[Close]

BLAST of Spg013998 vs. TAIR 10
Match: AT4G34210.1 (SKP1-like 11 )

HSP 1 Score: 196.8 bits (499), Expect = 2.2e-50
Identity = 106/173 (61.27%), Postives = 127/173 (73.41%), Query Frame = 0


Query: 3   SSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYCKK 62
           SSK IVL SSDG++F+++EAVA++SQTI HM+EDDC    IPL NV S IL KVIEYCKK
Sbjct: 2   SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61

Query: 63  HVETDDKDSKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVNYFVDHVYLAANY 122
           H    D+ +   ++ L  WD +F+ ++Q+T+F+LI                    LAANY
Sbjct: 62  H--HVDEANPISEEDLNNWDEKFMDLEQSTIFELI--------------------LAANY 121

Query: 123 LNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 176
           LNIKSLLDLTCQTVADMIKGKTPEEIR TFNI+NDFTPEEEE VR+ENQWAFE
Sbjct: 122 LNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152

[Close]

BLAST of Spg013998 vs. TAIR 10
Match: AT2G25700.1 (SKP1-like 3 )

HSP 1 Score: 194.9 bits (494), Expect = 8.2e-50
Identity = 106/180 (58.89%), Postives = 126/180 (70.00%), Query Frame = 0


Query: 3   SSKKIVLKSSDGETFDIDEAVALESQTIKHMIEDDCADTVIPLPNVSSSILAKVIEYCKK 62
           + K I+LKSSDGE+F+++EAVA+ESQTIKHMIEDDC D  IPLPNV+ +ILAKVIEYCKK
Sbjct: 4   TKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKK 63

Query: 63  HVET-----DDKD--SKAVDDTLKAWDAEFVKVDQNTLFDLILKQRIADYCELVNYFVDH 122
           HVE       DKD      +  LK WD +FVKVD  TLFDL+                  
Sbjct: 64  HVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLL------------------ 123

Query: 123 VYLAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 176
              AANYLNI  LLDLTC+ VAD ++GKTP ++R+ FNIKND+TPEEE EVR EN+WAFE
Sbjct: 124 --RAANYLNISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163

The following BLAST results are available for this feature:

BLAST of Spg013998 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144851.1	3.0e-70	82.29	SKP1-like protein 1B [Cucumis sativus]	[more]
XP_022135870.1	5.1e-70	82.29	SKP1-like protein 1B [Momordica charantia]	[more]
XP_008447950.1	1.1e-69	81.14	PREDICTED: SKP1-like protein 1B [Cucumis melo] >KAA0049758.1 SKP1-like protein 1...	[more]
KAG7015279.1	8.2e-68	81.71	SKP1-like protein 4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023529806.1	1.1e-67	81.71	SKP1-like protein 1A [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg013998 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHW7	3.8e-60	67.02	SKP1-like protein 1B OS=Arabidopsis thaliana OX=3702 GN=SKP1B PE=1 SV=1	[more]
Q39255	6.5e-60	69.27	SKP1-like protein 1A OS=Arabidopsis thaliana OX=3702 GN=SKP1A PE=1 SV=1	[more]
Q6PL11	2.0e-56	66.67	SKP1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP1 PE=1 SV=1	[more]
Q651E8	2.8e-55	65.95	SKP1-like protein 20 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP20 PE=1 SV=1	[more]
Q9LNT9	2.9e-52	63.33	SKP1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=ASK4 PE=1 SV=1	[more]

BLAST of Spg013998 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4P4	1.5e-70	82.29	SKP1-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G012950 PE=3 SV=1	[more]
A0A6J1C297	2.5e-70	82.29	SKP1-like protein OS=Momordica charantia OX=3673 GN=LOC111007712 PE=3 SV=1	[more]
A0A5A7U3D8	5.5e-70	81.14	SKP1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00...	[more]
A0A1S3BI15	5.5e-70	81.14	SKP1-like protein OS=Cucumis melo OX=3656 GN=LOC103490282 PE=3 SV=1	[more]
A0A6J1EKE0	5.2e-68	81.71	SKP1-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435156 PE=3 SV=1	[more]

BLAST of Spg013998 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42190.1	2.7e-61	67.02	E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein	[more]
AT1G75950.1	4.6e-61	69.27	S phase kinase-associated protein 1	[more]
AT1G20140.1	2.1e-53	63.33	SKP1-like 4	[more]
AT4G34210.1	2.2e-50	61.27	SKP1-like 11	[more]
AT2G25700.1	8.2e-50	58.89	SKP1-like 3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001232	S-phase kinase-associated protein 1-like	SMART	SM00512	skp1_3	coord: 4..125 e-value: 9.1E-41 score: 151.4
IPR016073	SKP1 component, POZ domain	PFAM	PF03931	Skp1_POZ	coord: 5..64 e-value: 1.8E-28 score: 98.5
IPR011333	SKP1/BTB/POZ domain superfamily	GENE3D	3.30.710.10	Potassium Channel Kv1.1; Chain A	coord: 1..176 e-value: 2.8E-71 score: 240.9
IPR011333	SKP1/BTB/POZ domain superfamily	SUPERFAMILY	54695	POZ domain	coord: 6..67
IPR016072	SKP1 component, dimerisation	PFAM	PF01466	Skp1	coord: 126..173 e-value: 4.9E-30 score: 103.3
IPR016897	S-phase kinase-associated protein 1	PANTHER	PTHR11165	SKP1	coord: 1..102 coord: 115..175
None	No IPR available	PANTHER	PTHR11165:SF145	PUTATIVE-RELATED	coord: 115..175
None	No IPR available	PANTHER	PTHR11165:SF145	PUTATIVE-RELATED	coord: 1..102
None	No IPR available	CDD	cd18322	BTB_POZ_SKP1	coord: 6..140 e-value: 3.03112E-59 score: 182.021
IPR036296	SKP1-like, dimerisation domain superfamily	SUPERFAMILY	81382	Skp1 dimerisation domain-like	coord: 104..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg013998.1	Spg013998.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0097602	cullin family protein binding
molecular_function	GO:0016301	kinase activity