Spg013965 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg013965
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	chromatin remodeling protein SHL-like
Location	scaffold3: 33790224 .. 33797898 (-)
RNA-Seq Expression	Spg013965
Synteny	Spg013965

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTGGTTGGCACGGCGGAGGTGGTTCGTCGGCGTGATATGAGAGGTAGGTAGCGATATACACTCTGTGGTGGCGGTGGGGAATAGTGTGGAATGGGGGTTTCGAGGGTGTGGAATGCTCTCGATGAGAGGTAGTCTTTTTAGGTTATTCAATTTTCTAGGGAAATTAGCAACTTGTTCTTATTTTTTGTTTTTTAATTTCTGATCTTCTTAGTTGCAGGTAGTATGTCTTCGGATTGAGAGGACCTTTTTTCCAATTAATGCATTCCGAAGGTGTTTCTCTCTACTGAGGAAGGTTGAACTTTGTACTCCTTCCCCAATAAAGGTATTGACTCCTTTTTCCGGGAAGCAACTTTTTCCAGGAAGCAAATTTTTCGAGTAGTTAACAATATGATACACCTAGATTTTCAAACTAGTTTTATTTCTTGGATTTTTTAATTTCAAACTTCCTAAAATGTCTCCAACTTATTTTTAGGGGTATATTTTATCTCTCTTAAACTCTGATTTTGGTTTTAAACGTTAAGAATATGTTAGACAGTTTGTTGGGGGGCATATTTGTCTTTTACAAATAGGTATTTATTAATCATTAAATCATTTAGCCATCTATTTAATTTATAAACGTTTGTAGTTATATTTCAAGCCACCTATTTATTTTTAGCCATATTTCTTGTTGCCCCAAAAAAAAAAAAAGAAAAATCTTTACCAGCAATTCTTAAGATTAAAATAAATACACAATCTGAAAAAACAGTTAGGCTTTTAATTTTGAAAGTGAAAAAAAAAAAAAGAAAAAAAAATGCGCCAATCACTGTTACAAAATCTGGCCTCATTTTCTCCACCGTCGCGAAGTAAAAGTTTAAGCTTTGGCATATGCCGCCACGTGACAACCAAATCCACTCCTCCGCCGGACATTTTCCCCTTTTCCACCGACGACTCTGCAGGTTACTCCGGCGACCAATTTCCCGGCCAAATTCACTCTTCTGCTAAACCTTTCACTTGTTCCTTCCATTAATTTCTGTCAAACTTCCCTCGATTTCGCTTCTTCTCTTCTAATTCCAGGGCTCGCTTTTGATGGCCAAACCCAAGGCTCCGAGGCAAACCCTAGATTCCTACACTGTAAAGCGCATCAACAAAACCATTAAAGGTAACACAATCCACTGCCTCTTCTTTCTCTTCTTCTTCTTCTTCTTTTGTTGGAATCTTTCAGATGGTTCCATTTTCTTGTCTGTTTCTGATCTTGCGGAATTTTTCGCGTTTTTGTTCTTCTTAGCCGGCGATTGCGTGCTTATGAGGCCTTCCGAACCCTCGAAGCCGTCGTATGTGGCCAAAATTGAGAAGATTGAGGCTGATTCTCGTGGGGCCAATGTGAAGGTCCATGTTCGTTGGTATTACCGGCCGGAGGAATCGATTGGCGGTCGGAGACAGTTTCATGGCTCCAAGGAGTTGTTTCTCTCCGATCATTACGACGTTCAAAGCGCCGACACCATCGAGGGGAAGTGTACAGTGCATACATTTAAGAATTATACCAAGCTTGATGCTGTTGGAAATGATGATTATTTTTGCCGTTTCGACTATAATTCCGCTACTGGAGCTTTCAATCCCGATCGAGTGGCTGTGTGAGTTCTTTTTAGTAGCTCTATTATATTGCTGGTTTAGATATTCTGTTGATGTGTTTGGCATTAAGTACTCCTGAAATGTGATCATTCTGACTTGACATGGGAAGAAATTGGTTTCTGCAGATTTCCATAGTGAGTTTTACTAGTTTAGCTGCATTGTCGTCTCCATAGTTGCGGTTGACGTCTTGAGCTGGCTAGTCTCGTCAACCTTGTATAAGGGAGTGGTGGAGGGTTTTAAAATGTGTTCCAAAGGTCTTCGGTTTTCACACTTTTCGTTTGTCAATGACACCCTTTTCTTTTGCTCTGAGGAGAGCTCCTTGAGAAATCTCAATGGTTTCTTGTCTTTCTTTGAAGCTATGTTTGGCCTTAAAATCAATCGGCAAAAAAGTTCCATCATTGGTTTAAGTTGTGAGCGTTCTAAGTTGACCTCCTAGGCCTCATTGGTTGGGTGTGAAGTAAGGCAGCTTCCTTGTTCTATCTTGGTCTTCCTTTTGGGGTAACCCAAGAAGCGTGTCTTTTTGGAATCCTGTGGTGGAGAAAATTCAAAAAAAGCTTTCTAGGCATCTGTTAATCGGGTTATTAAGAGTATTGAGAGGTTATTGAGGCATTTCCAAGTGGAAAAGGGTGGTGGGCCCATTCGGTTAAGTGGGAGGTTGTCTCTAAGCCTGTTGAAGTCGAGGTTTTGGGTATTGGGAACCGGATATTAGCAACAAGACCCTTTTGGAAAAATGGCTGTAGCGTTTCTTCTTGGAGCCGAATGGCCTGTGGCATAGTGTTGTCGTGAGCAAGTCTGGTCCACATCCTTTTGATTGGGTTTCAAGTTGTAGGCTTAAGAGTTCTAGCAAAAACCTCTGAACCACTTTTGCTTCAACTTTTCCTCAATTCTGTCATTATTTTCAATGCTCCATTAGAGATAGTACAAAAACCTATTTCTAGGAGGACTCTTGAGTTGGGGAGAGATCTTTGTGCATTTTATTTCCTCATCTCTACCATCTGTCCAAGGAGAGGTTATATTAGGTAGCTTCTATTCTGCCTTCCTTTGACTCCTCCTCGTCCTCTTACTGAGTTGAGACGGTTGACCCTATTAGTCTTCTTTCCATCCATTCTGATTAGGTCATTCATCATAGAAGGGGGATTCTCGTGTTTGGAGTCCTAAACCCTGTGAGGGTTTCTCCTGTAGCTCTTTCTTTCAGATCCGTTGTGCTTCTCCTAGGGTGTTTCTGTTTTCTCTTACCTCTGGAAGGCTATAATTCCTAAGAATATGAGATTTTTTGTTTGGTAAATTTTACATGGAAGAGTGAACATGTAGGATCGTGAGGAGGATCTTTATCATTTGCTGGGAGAATGTTCGTTTGCAATTTCTCTGTGGAACCATTTCTTTAGTATTTTTGGGGTGGCTATGGCTCGTAATAGAGGTTGAGCTTTCTTGATCGAAGGAATGCTTCTCAACTTTCCTTTTATGACAAATGAAAGATTCTGTGGCAAGTTTGTTTCTTTTGAATTTTGTGGGTATTTGGCTTGAGAGAAATGGTTGTATTCTTAGAGAGACGGAGAGATCTAGGGATGAGTTTGAGATTTAATTAGATTTAACTCTTCTTTATGGACGTCCGTTAATTGGGCCTTTTGTAATTACCTGTTGGGGCTCATTCTTTTGGATTAGGATTCGTTGTTGTAATTAGTTTTGAGGATTTTTGTTAGCAGGTTTGTATCTTGTTTTCAGGGGCTTTTTTTTATGCCCTGGTTCTCCCATTCATATTTCTTAATGAAAGTTCAATTTCTTATTGAAAAAAAGATTAGGCATGTCTTTTTTAAAAAAAAATTGTTAAAGATCAATTCTTGTTCAGGATTATTCTTGTTACTGTTTTATGTATATGGTTATATCTCGTTAACCATTTAAGCTTATGAATCTCCTTTCTGCATAGCCTTACCTGATTATTCTTGGTGCAAATTTTCACATGATTTTATGTTGCAGGTATTGCAAATGTGAGATGCCTTATAATCCTGACGACCTAATGGTTCAGTGCGAGAGCTGCAGTGATTGGTAAGCTGGGTGCTCATGATGCTATTGATTTCATTTACAGCCTTAACACGTGCTCATGAAAGTACTTGTAGTGGTGTGCATATCTCCTATAATTTGGGGCCTGTGGAATGGAAACATAATTACAGTAAAAAAGATTGATGAACATTTAACCAACAATGTAATAATGAACACTAACCACCATGGGTTGGCCTAGTGGTCAATAAGAGCCATATAAATAGTAAAGAGTTTAAAGGGAATGGATTCAAGCCATGTTGACTATCTACCTAGTATTTAATATCTTACGAGTTACTTTGACAACAAAATGTAGTAGGTTTAGTCGGTTCTCCCCTGAAAATAGTTGAGGTACGCGCAAACTAGCTCCTACATCCACGGATATCAAATAATAATAATGGACACTATCTCTCCAATCATAAATCGAAGTAACGTATCTTGATTTGTAGGTATTTGTATATACATTATCTCCTATTAGCTTAGACTTGTGGTACTTTCACTTTCTTTTTTTTTTTTTTTGGGAATAAATAATAATGGAGTAAAAAACGGAAAATAGAGTTCACAAAAACAATAGGAGATTAGCTAAAAACATACTTTGGTGCCAAATATAATGTTTCAAAATGCTATGCACTCTAAGGTGTTCAGGTTTTTAGTTATCTAAGAGTGAGGAGGTGTGCATAAGATGTTACCTGGAGTGAAGCTAGACACACTTTACTTAAGACAAAAACATATTCTATAATGAAGACGACATTAAGATCAAACATAAAATACGTAAAATACGTGGTTATACAGGACTATGCATCTCAAAACTGGTACATTGAATTATGTAGCGCTAGCAGTCTTATTTAATTGTAAAAACATATTATAAAAATTAATTTGAAATAGGAGATAAGCTTCTGCTGAAACGATAAGCTTTAATGATCTTTATTTATATTGGAAAAGGATTTCTGAAATTAAAATTATTTAGGTTTCATTTAAAATTGGATTACTTTACCTAAACCATTTTGTAATCACACTACTTTGCTGCTTTTCATAAAATTAGTATTTCTTTCTATAGTCCCCTTTGCTAGGGTTTTTGACCTGCCTTTTGGATGTAGTTCTTCTCATTTTCTTAATTAGAAGTCTCGTTTATTGGAGACATACTCCAAGGTTCTAAGTTTAGGAATCATCTATATTTGGGTTATTTTGTAGTTATCCCTATTGGCAACCCCTTCAACAAGGAAAAAATATCTTTTGGCTCCAACTGACTAGATCGTTCTTATGGAATCTCATCTTTGGTTGGAAAAGGAATAATAGGACTTTAATGACAAGGAAACCCATATAGACAAATTCATTGACACTGTTTTTTTGTGTAGCTCACAAATGGTGCAAATTATACCTTTTATTCAATAGCTAAAGCTTAGTTGAACTTTTCAATAATTGGAAGTGTTTTTTTGTGATCTTCCATGGTTTCGGTCTTGATTTTCCTCCTCTCCCCTTTGGTGGTAATTTCATAGCATCTACGAAATTGTCTATGTTTCGGTATTGTAAATAAAAGAGGTTATGGATTCAAGTCTAGCTCCTAGAAGAAAACTAATAATTAAAAAATCTTGTCCCGAGCGTAACTCAACTGGTCAAGGCATTATATCCTCGACCAAAAGATTAGAGACTCAAATTCCCACCCCCACATGTTGAATGGAAAAAAAGAAAAAAAAAAAAGGCTTTCAGAATTGGAGGTGGGAGAAGCCTTCTTAGAGATTGTTGGGGTGGGTCGACTATGAGCGTAATGCAAGGAGTTGGATTTCTTTATAGCACAAACCTCGTAGTTTTATGCTTGCTTGCATATACTAATGAGGAAATAGAACAATAAAATTAGTCCACTAGGTCAATAATTAGTGTTCCTATAAGCTTTATGACTTTCTCGATTTTGAATTGTTTGAACAGGTTCCTAATAGGGGAAGATGAAACAAACGTTATTCTTTTGGATTTTAAAATCATTTTGTTTTATATTGGATACTGAAGTCTTTTTTTATTCTAATAAATTCTGAACTTCTATATATCTACATATATATTCTGAAATACTTTGGTTGAATTCGTTGAGGTCCTTGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAATTCAACAACATTTGAGAGTAGGGGATTCAAACCTCTGACCTCGTGGTAGAGGGTACATGCCAATTACCGTTGAGCTATGCTCACTTTGGCCAGGTCCTTGAAGTTGGTATTAGGTTTTTGAAAATCTGTGTATCAGTGGGGTGGAACCTCATGCCACGGATATGTAAACAAGAAATTCTATTGAAGATACTGAACCAATGTTCTTTAGAAGATTATTTGAGGTGTGGGGGAAGAAAGAAAGGAATTCCTCATGTCCTGGGGCTCTTCAATCTCTAAGGAACGATGGAGGACAAATTCAATGCGGATTACTATTTATAGAATTATTTTCAGGAAATGATCTTGAGTACTAAATCTGCTTTCAATTTTTTTACCTTTGTGGTTGTTACATTCATGTCTGCTAATATATTTTGTGAATCATTTGCCAAATGTATGGTTTTATAGCATAAAATCTGCATCTTAAAGTGGATGATATTCTTGATTTAGGTTTCATCCTGCTTGTATAGAAATGACTGCAGAAGAAGCTAAAAAACTTGACCACTTTTTCTGTGAAAGCTGTTCTTCAGAGGGTCAAAAGAAGTTGCAGAATTCACAGTCTACATCTAGACTTGCAGAGACAAAGGTATTTGTTGAATGTCACCGTTTGGGTTTTTCTTTATTATTATTATTATTATTTTTTTTTTTTGGGTCAAACTGCATAATCTGATTCCATTCTGCGATATTTTAAACTACCCTCTGTTTTATTAAGCCTAAAGGTAGCAGGTGACAGTCATGTCATGCACATACTTCTTAGCTTTTGGTTGAAGCTCATTCTTATCTGTAGGTATTTCTTCCTCATTTGGGTGGTAGTGTAGGTATTATGGGGAAAGAAGAATGAGCATGAAGAAGTCATATGGCTTAATAGGAAACTAACTTAACCACCGTGGGTGACCTAGTGGTCAATAAGGGCCGTGTAAATAATAAAAGGGTTTAGAGAAAGTGGTATCAAGCCATGGAGGTCACCTACTTAGACTTTAATATCCTACAAGTTTTATTGACAACCAAATATTTTAGGATTAGGCGATTGTCCTGTGAGAATAGTGGTGTACTCGAGTTGATTTGGACACTTGCAGATATATAGAAAAGAAATAAAAGAAACTTGAAGACGTATTAAACATTGAAGTGTTACTAGTAGTTGCATACGAGTTAACTTGGTTCAAGCATTACATTTTGTTTTGGTTAGTTTTTACCAAGCTTATACCTTATAATGTGATAATTTTAAGGGATGAAATGGCTGTTACTTTCCTGCTATGGGAATATGGTCTTCATCATGATGAATGATATGTTTTAATGTTATTTCAGGTGGATACAAAACGACGCCGGAGGTGATGGTAGTGTAAATAAAAAAAATACGGTGACTTAGTCGTTAAGAACCAGAGCTTCTAACTTTCTAATGAGTTGGAACAAGTGCATAGATGTAGGAACATGTAAATACTAGCTCTAGTATGTCCACATTCATTGCAGGTAGAGAGACTGGTTTGAAATGTATTGAAGTTCTTTTATTTGAATGGAGCAAACCAAACCAAACCAAACCCCTTTCTTCTGTGTAGGTTGCAGATTTGTTTTATTTCCTGCAAAACTCCTAAACTTAACTCTTTTGGAATCTAGTGTTCTCATCATTCTTAGCTGATGTATAGGTCAAATCTCTGTCGATGGCAGTAGGAAAGAGATTTTTATGTAATTATTTTGTTGCAAGTTAATTTGACTTGGCTTCATTAGACTGGCTACTCTAGTGTGTCCCAATAACCCTTGTATAAATTTAAATTTCATTTTTTTTTTCCTTTTTCTGAATGAACAATTCCTAGGGATGTAAGAAAATTTTAAAAAAAACCTACCATTTTAACCGA

mRNA sequence

ATGAAGGTGGTTGGCACGGCGGAGGTGGTAGTATGTCTTCGGATTGAGAGGACCTTTTTTCCAATTAATGCATTCCGAAGGTGTTTCTCTCTACTGAGGAAGGTTGAACTTTGTACTCCTTCCCCAATAAAGGGCTCGCTTTTGATGGCCAAACCCAAGGCTCCGAGGCAAACCCTAGATTCCTACACTGTAAAGCGCATCAACAAAACCATTAAAGATGGTTCCATTTTCTTGTCTGTTTCTGATCTTGCGGAATTTTTCGCGTTTTTGTTCTTCTTAGCCGGCGATTGCGTGCTTATGAGGCCTTCCGAACCCTCGAAGCCGTCGTATGTGGCCAAAATTGAGAAGATTGAGGCTGATTCTCGTGGGGCCAATGTGAAGGTCCATGTTCGTTGGTATTACCGGCCGGAGGAATCGATTGGCGGTCGGAGACAGTTTCATGGCTCCAAGGAGTTGTTTCTCTCCGATCATTACGACGTTCAAAGCGCCGACACCATCGAGGGGAAGTGTACAGTGCATACATTTAAGAATTATACCAAGCTTGATGCTGTTGGAAATGATGATTATTTTTGCCGTTTCGACTATAATTCCGCTACTGGAGCTTTCAATCCCGATCGAGTGGCTGTGTATTGCAAATGTGAGATGCCTTATAATCCTGACGACCTAATGGTTCAGTGCGAGAGCTGCAGTGATTGGTTTCATCCTGCTTGTATAGAAATGACTGCAGAAGAAGCTAAAAAACTTGACCACTTTTTCTGTGAAAGCTGTTCTTCAGAGGGTGGATACAAAACGACGCCGGAGGTGATGGTAGTGTAA

Coding sequence (CDS)

ATGAAGGTGGTTGGCACGGCGGAGGTGGTAGTATGTCTTCGGATTGAGAGGACCTTTTTTCCAATTAATGCATTCCGAAGGTGTTTCTCTCTACTGAGGAAGGTTGAACTTTGTACTCCTTCCCCAATAAAGGGCTCGCTTTTGATGGCCAAACCCAAGGCTCCGAGGCAAACCCTAGATTCCTACACTGTAAAGCGCATCAACAAAACCATTAAAGATGGTTCCATTTTCTTGTCTGTTTCTGATCTTGCGGAATTTTTCGCGTTTTTGTTCTTCTTAGCCGGCGATTGCGTGCTTATGAGGCCTTCCGAACCCTCGAAGCCGTCGTATGTGGCCAAAATTGAGAAGATTGAGGCTGATTCTCGTGGGGCCAATGTGAAGGTCCATGTTCGTTGGTATTACCGGCCGGAGGAATCGATTGGCGGTCGGAGACAGTTTCATGGCTCCAAGGAGTTGTTTCTCTCCGATCATTACGACGTTCAAAGCGCCGACACCATCGAGGGGAAGTGTACAGTGCATACATTTAAGAATTATACCAAGCTTGATGCTGTTGGAAATGATGATTATTTTTGCCGTTTCGACTATAATTCCGCTACTGGAGCTTTCAATCCCGATCGAGTGGCTGTGTATTGCAAATGTGAGATGCCTTATAATCCTGACGACCTAATGGTTCAGTGCGAGAGCTGCAGTGATTGGTTTCATCCTGCTTGTATAGAAATGACTGCAGAAGAAGCTAAAAAACTTGACCACTTTTTCTGTGAAAGCTGTTCTTCAGAGGGTGGATACAAAACGACGCCGGAGGTGATGGTAGTGTAA

Protein sequence

MKVVGTAEVVVCLRIERTFFPINAFRRCFSLLRKVELCTPSPIKGSLLMAKPKAPRQTLDSYTVKRINKTIKDGSIFLSVSDLAEFFAFLFFLAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGGYKTTPEVMVV

Homology

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BLAST of Spg013965 vs. NCBI nr
Match: KAG7011722.1 (Chromatin remodeling protein SHL, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 419.9 bits (1078), Expect = 1.7e-113
Identity = 204/234 (87.18%), Postives = 209/234 (89.32%), Query Frame = 0


Query: 45  GSLLMAKPKAPRQTLDSYTVKRINKTIK-------------------DGSIFLSVSDLAE 104
           GSLLMAKPKAPRQTLDSYTVKRINKTIK                   DGS+  SVSDLAE
Sbjct: 1   GSLLMAKPKAPRQTLDSYTVKRINKTIKGKKIHSLFFLFFFFCWNLSDGSVLASVSDLAE 60

Query: 105 FFAFLFFLAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQ 164
           FF  L FLAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH+RWYYRPEESIGGRRQ
Sbjct: 61  FFG-LLFLAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHIRWYYRPEESIGGRRQ 120

Query: 165 FHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPD 224
           FHGSKELFLSDHYDVQSADTIEGKCTVHTFK+YTKLDAVGN+DYFCRFDYNS TGAFNPD
Sbjct: 121 FHGSKELFLSDHYDVQSADTIEGKCTVHTFKSYTKLDAVGNEDYFCRFDYNSTTGAFNPD 180

Query: 225 RVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSE 260
           RVAVYCKCEMPYNPDDLMVQCESC+DWFHPACIEMTAEEAKKLDHFFCESCSSE
Sbjct: 181 RVAVYCKCEMPYNPDDLMVQCESCTDWFHPACIEMTAEEAKKLDHFFCESCSSE 233

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BLAST of Spg013965 vs. NCBI nr
Match: KAG6572055.1 (Chromatin remodeling protein SHL, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 396.0 bits (1016), Expect = 2.7e-106
Identity = 189/216 (87.50%), Postives = 194/216 (89.81%), Query Frame = 0


Query: 44   KGSLLMAKPKAPRQTLDSYTVKRINKTIKDGSIFLSVSDLAEFFAFLFFLAGDCVLMRPS 103
            +GSLLMAKPKAPRQTLDSYTVKRINKTIK                     AGDCVLMRPS
Sbjct: 978  QGSLLMAKPKAPRQTLDSYTVKRINKTIK---------------------AGDCVLMRPS 1037

Query: 104  EPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSA 163
            EPSKPSYVAKIEKIEADSRGANVKVH+RWYYRPEESIGGRRQFHGSKELFLSDHYDVQSA
Sbjct: 1038 EPSKPSYVAKIEKIEADSRGANVKVHIRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSA 1097

Query: 164  DTIEGKCTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYNPDDLM 223
            DTIEGKCTVHTFK+YTKLDAVGN+DYFCRFDYNS TGAFNPDRVAVYCKCEMPYNPDDLM
Sbjct: 1098 DTIEGKCTVHTFKSYTKLDAVGNEDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLM 1157

Query: 224  VQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSE 260
            VQCESC+DWFHPACIEMTAEEAKKLDHFFCESCSSE
Sbjct: 1158 VQCESCTDWFHPACIEMTAEEAKKLDHFFCESCSSE 1172

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BLAST of Spg013965 vs. NCBI nr
Match: XP_022135772.1 (chromatin remodeling protein SHL-like [Momordica charantia])

HSP 1 Score: 395.6 bits (1015), Expect = 3.5e-106
Identity = 188/225 (83.56%), Postives = 198/225 (88.00%), Query Frame = 0


Query: 39  TPSPIKGSLLMAKPKAPRQTLDSYTVKRINKTIKDGSIFLSVSDLAEFFAFLFFLAGDCV 98
           +P   +G+LLMAKPKAPRQTLDSYTVKRINKTI+                     AGDCV
Sbjct: 19  SPQKQQGTLLMAKPKAPRQTLDSYTVKRINKTIR---------------------AGDCV 78

Query: 99  LMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHY 158
           LMRPSEPSKPSYVAK+EKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKE+FLSDH+
Sbjct: 79  LMRPSEPSKPSYVAKVEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKEVFLSDHF 138

Query: 159 DVQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYN 218
           DVQSADTIEGKCTVHTFK+YTKLDAVGNDDYFCRF+YNS+TGAFNPDRVAVYCKCEMPYN
Sbjct: 139 DVQSADTIEGKCTVHTFKSYTKLDAVGNDDYFCRFEYNSSTGAFNPDRVAVYCKCEMPYN 198

Query: 219 PDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGGYK 264
           PDDLMVQCESCSDWFHPACIEMT EEAKKLDHFFCESCSSEG  K
Sbjct: 199 PDDLMVQCESCSDWFHPACIEMTVEEAKKLDHFFCESCSSEGQKK 222

[Close]

BLAST of Spg013965 vs. NCBI nr
Match: XP_038889039.1 (chromatin remodeling protein SHL-like [Benincasa hispida])

HSP 1 Score: 394.0 bits (1011), Expect = 1.0e-105
Identity = 189/215 (87.91%), Postives = 191/215 (88.84%), Query Frame = 0


Query: 49  MAKPKAPRQTLDSYTVKRINKTIKDGSIFLSVSDLAEFFAFLFFLAGDCVLMRPSEPSKP 108
           MAKPKAPRQTLDSYTVKRINKTIK                     AGDCVLMRPSEPSKP
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIK---------------------AGDCVLMRPSEPSKP 60

Query: 109 SYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEG 168
           SYVAK+EKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEG
Sbjct: 61  SYVAKVEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEG 120

Query: 169 KCTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCES 228
           KCTVHTFKNYTKLDAVGNDDYFCRFDYNS TGAF+PDRVAVYCKCEMPYNPDDLMVQCES
Sbjct: 121 KCTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFSPDRVAVYCKCEMPYNPDDLMVQCES 180

Query: 229 CSDWFHPACIEMTAEEAKKLDHFFCESCSSEGGYK 264
           CSDWFHPACIEMTAEEAKKLDHFFCESCSSEG  K
Sbjct: 181 CSDWFHPACIEMTAEEAKKLDHFFCESCSSEGQKK 194

[Close]

BLAST of Spg013965 vs. NCBI nr
Match: XP_008448075.2 (PREDICTED: chromatin remodeling protein SHL-like [Cucumis melo])

HSP 1 Score: 392.1 bits (1006), Expect = 3.8e-105
Identity = 188/215 (87.44%), Postives = 190/215 (88.37%), Query Frame = 0


Query: 49  MAKPKAPRQTLDSYTVKRINKTIKDGSIFLSVSDLAEFFAFLFFLAGDCVLMRPSEPSKP 108
           MAKPKAPRQTLDSYTVKRINKTIK                     AGDCVLMRPSEPSKP
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIK---------------------AGDCVLMRPSEPSKP 60

Query: 109 SYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEG 168
           SYVAKIEKIEADSRG NVKVHVRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEG
Sbjct: 61  SYVAKIEKIEADSRGGNVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEG 120

Query: 169 KCTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCES 228
           KCTVHTFKNYTKLDAVGNDDYFCRFDYNS TGAFNPDRVAVYCKCEMPYNPDDLMVQCES
Sbjct: 121 KCTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCES 180

Query: 229 CSDWFHPACIEMTAEEAKKLDHFFCESCSSEGGYK 264
           CSDWFHPACIEMTAEEAKKLDHF+CESCSSEG  K
Sbjct: 181 CSDWFHPACIEMTAEEAKKLDHFYCESCSSEGQKK 194

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BLAST of Spg013965 vs. ExPASy Swiss-Prot
Match: F4JL28 (Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.6e-82
Identity = 143/214 (66.82%), Postives = 164/214 (76.64%), Query Frame = 0


Query: 50  AKPKAPRQTLDSYTVKRINKTIKDGSIFLSVSDLAEFFAFLFFLAGDCVLMRPSEPSKPS 109
           +K K  R+ LDSYT+K  NK ++                     AGDCVLMRPS+  KP 
Sbjct: 10  SKIKTGRKELDSYTIKGTNKVVR---------------------AGDCVLMRPSDAGKPP 69

Query: 110 YVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK 169
           YVA++EKIEAD+R  NVKVH RWYYRPEES+GGRRQFHG+KELFLSDH+DVQSA TIEGK
Sbjct: 70  YVARVEKIEADARN-NVKVHCRWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGK 129

Query: 170 CTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCESC 229
           C VHTFKNYT+L+ VG +DY+CRF+Y +ATGAF PDRVAVYCKCEMPYNPDDLMVQCE C
Sbjct: 130 CIVHTFKNYTRLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGC 189

Query: 230 SDWFHPACIEMTAEEAKKLDHFFCESCSSEGGYK 264
            DW+HPAC+ MT EEAKKLDHF C  CSS+   K
Sbjct: 190 KDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVK 201

[Close]

BLAST of Spg013965 vs. ExPASy Swiss-Prot
Match: Q9FEN9 (Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 6.2e-82
Identity = 140/211 (66.35%), Postives = 165/211 (78.20%), Query Frame = 0


Query: 49  MAKPKAPRQTLDSYTVKRINKTIKDGSIFLSVSDLAEFFAFLFFLAGDCVLMRPSEPSKP 108
           M K KAPR+ L SY +K INK+I++                     GD VLMR SEP KP
Sbjct: 1   MPKQKAPRKQLKSYKLKHINKSIQE---------------------GDAVLMRSSEPGKP 60

Query: 109 SYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEG 168
           SYVA++E IE D+RG++ KV VRWYYRPEESIGGRRQFHG+KE+FLSDH+D QSADTIEG
Sbjct: 61  SYVARVEAIETDARGSHAKVRVRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEG 120

Query: 169 KCTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCES 228
           KC VH+F +YTKLD+VGNDD+FCRF+YNS TGAF+PDRV V+CKCEMPYNPDDLMVQCE 
Sbjct: 121 KCKVHSFSSYTKLDSVGNDDFFCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEE 180

Query: 229 CSDWFHPACIEMTAEEAKKLDHFFCESCSSE 260
           CS+WFHP+CI  T EEAKK D+F+CE CS +
Sbjct: 181 CSEWFHPSCIGTTIEEAKKPDNFYCEECSPQ 190

[Close]

BLAST of Spg013965 vs. ExPASy Swiss-Prot
Match: F4JGB7 (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04260 PE=3 SV=2)

HSP 1 Score: 245.0 bits (624), Expect = 1.0e-63
Identity = 121/196 (61.73%), Postives = 144/196 (73.47%), Query Frame = 0


Query: 64  VKRINKTIKDGSIFLSVSDLAEFFAFLFFLAGDCVLMRPSEPSKPSYVAKIEKIEADSRG 123
           +K + + I  G++ + V          FF  GDCVLMRPS+  K  YVA++EKIEAD+R 
Sbjct: 21  IKILGREILLGNVIVEVG---------FFTVGDCVLMRPSDAGKAPYVARVEKIEADARN 80

Query: 124 ANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDA 183
            NVKVH RWYY PEES GGRRQ HG+KELFLSDH+DVQSA TIEGKC VHTFKNYT+L+ 
Sbjct: 81  -NVKVHCRWYYCPEESHGGRRQLHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLEN 140

Query: 184 VGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAE 243
           VG +DY+C FDY +ATGAF PDRVAVY KCEMPYN D+LM +   C    H AC+ +T E
Sbjct: 141 VGVEDYYCIFDYKAATGAFTPDRVAVYYKCEMPYNSDELM-ELLLCHYRVHLACVGVTIE 200

Query: 244 EAKKLDHFFCESCSSE 260
           EAKKL+HF C  CSS+
Sbjct: 201 EAKKLEHFVCVECSSD 205

[Close]

BLAST of Spg013965 vs. ExPASy Swiss-Prot
Match: O75151 (Lysine-specific demethylase PHF2 OS=Homo sapiens OX=9606 GN=PHF2 PE=1 SV=4)

HSP 1 Score: 64.3 bits (155), Expect = 2.4e-09
Identity = 23/58 (39.66%), Postives = 35/58 (60.34%), Query Frame = 0


Query: 207 VAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGGYKT 265
           V VYC C +PY+    M++C++C DWFH +C+ +  EEA  +D + C +C    G  T
Sbjct: 4   VPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKST 61

[Close]

BLAST of Spg013965 vs. ExPASy Swiss-Prot
Match: Q9WTU0 (Lysine-specific demethylase PHF2 OS=Mus musculus OX=10090 GN=Phf2 PE=1 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 2.4e-09
Identity = 23/58 (39.66%), Postives = 35/58 (60.34%), Query Frame = 0


Query: 207 VAVYCKCEMPYNPDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGGYKT 265
           V VYC C +PY+    M++C++C DWFH +C+ +  EEA  +D + C +C    G  T
Sbjct: 4   VPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKST 61

[Close]

BLAST of Spg013965 vs. ExPASy TrEMBL
Match: A0A6J1C3P9 (chromatin remodeling protein SHL-like OS=Momordica charantia OX=3673 GN=LOC111007651 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.7e-106
Identity = 188/225 (83.56%), Postives = 198/225 (88.00%), Query Frame = 0


Query: 39  TPSPIKGSLLMAKPKAPRQTLDSYTVKRINKTIKDGSIFLSVSDLAEFFAFLFFLAGDCV 98
           +P   +G+LLMAKPKAPRQTLDSYTVKRINKTI+                     AGDCV
Sbjct: 19  SPQKQQGTLLMAKPKAPRQTLDSYTVKRINKTIR---------------------AGDCV 78

Query: 99  LMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHY 158
           LMRPSEPSKPSYVAK+EKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKE+FLSDH+
Sbjct: 79  LMRPSEPSKPSYVAKVEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKEVFLSDHF 138

Query: 159 DVQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYN 218
           DVQSADTIEGKCTVHTFK+YTKLDAVGNDDYFCRF+YNS+TGAFNPDRVAVYCKCEMPYN
Sbjct: 139 DVQSADTIEGKCTVHTFKSYTKLDAVGNDDYFCRFEYNSSTGAFNPDRVAVYCKCEMPYN 198

Query: 219 PDDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGGYK 264
           PDDLMVQCESCSDWFHPACIEMT EEAKKLDHFFCESCSSEG  K
Sbjct: 199 PDDLMVQCESCSDWFHPACIEMTVEEAKKLDHFFCESCSSEGQKK 222

[Close]

BLAST of Spg013965 vs. ExPASy TrEMBL
Match: A0A1S3BJS6 (chromatin remodeling protein SHL-like OS=Cucumis melo OX=3656 GN=LOC103490361 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.9e-105
Identity = 188/215 (87.44%), Postives = 190/215 (88.37%), Query Frame = 0


Query: 49  MAKPKAPRQTLDSYTVKRINKTIKDGSIFLSVSDLAEFFAFLFFLAGDCVLMRPSEPSKP 108
           MAKPKAPRQTLDSYTVKRINKTIK                     AGDCVLMRPSEPSKP
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIK---------------------AGDCVLMRPSEPSKP 60

Query: 109 SYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEG 168
           SYVAKIEKIEADSRG NVKVHVRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEG
Sbjct: 61  SYVAKIEKIEADSRGGNVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEG 120

Query: 169 KCTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCES 228
           KCTVHTFKNYTKLDAVGNDDYFCRFDYNS TGAFNPDRVAVYCKCEMPYNPDDLMVQCES
Sbjct: 121 KCTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCES 180

Query: 229 CSDWFHPACIEMTAEEAKKLDHFFCESCSSEGGYK 264
           CSDWFHPACIEMTAEEAKKLDHF+CESCSSEG  K
Sbjct: 181 CSDWFHPACIEMTAEEAKKLDHFYCESCSSEGQKK 194

[Close]

BLAST of Spg013965 vs. ExPASy TrEMBL
Match: A0A0A0K4E7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004100 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 4.1e-105
Identity = 187/215 (86.98%), Postives = 190/215 (88.37%), Query Frame = 0


Query: 49  MAKPKAPRQTLDSYTVKRINKTIKDGSIFLSVSDLAEFFAFLFFLAGDCVLMRPSEPSKP 108
           MAKPKAPRQTLDSYTVKRINKTIK                     AGDCVLMRPSEPSKP
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIK---------------------AGDCVLMRPSEPSKP 60

Query: 109 SYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEG 168
           SYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEG
Sbjct: 61  SYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEG 120

Query: 169 KCTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCES 228
           KCTVHTFKNYTKLDAVGNDDYFCRFDYNS TGAFNPDRVAVYCKCEMPYNPDDLMVQCE+
Sbjct: 121 KCTVHTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCEN 180

Query: 229 CSDWFHPACIEMTAEEAKKLDHFFCESCSSEGGYK 264
           CSDWFHPACIEMT EEAKKLDHF+CESCSSEG  K
Sbjct: 181 CSDWFHPACIEMTTEEAKKLDHFYCESCSSEGQKK 194

[Close]

BLAST of Spg013965 vs. ExPASy TrEMBL
Match: A0A6J1I8K6 (chromatin remodeling protein SHL isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111470155 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 6.0e-104
Identity = 188/220 (85.45%), Postives = 192/220 (87.27%), Query Frame = 0


Query: 44  KGSLLMAKPKAPRQTLDSYTVKRINKTIKDGSIFLSVSDLAEFFAFLFFLAGDCVLMRPS 103
           +GSLLMAKPKA RQTLDSYTVKRINKTIK                     AGDCVLMRPS
Sbjct: 24  QGSLLMAKPKALRQTLDSYTVKRINKTIK---------------------AGDCVLMRPS 83

Query: 104 EPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSA 163
           EPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSA
Sbjct: 84  EPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSA 143

Query: 164 DTIEGKCTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYNPDDLM 223
           DTIEGKCTVHTFKNYTKLDAVGN+DYF RFDYNSATGAF PDRVAVYCKCEMPYNPDDLM
Sbjct: 144 DTIEGKCTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLM 203

Query: 224 VQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSEGGYK 264
           VQCE CSDWFHPACIEM+AE+AKKLDHFFCESCS EG  K
Sbjct: 204 VQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKK 222

[Close]

BLAST of Spg013965 vs. ExPASy TrEMBL
Match: A0A6J1IJS1 (chromatin remodeling protein SHL-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474291 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 8.7e-103
Identity = 182/211 (86.26%), Postives = 188/211 (89.10%), Query Frame = 0


Query: 49  MAKPKAPRQTLDSYTVKRINKTIKDGSIFLSVSDLAEFFAFLFFLAGDCVLMRPSEPSKP 108
           MAKPKAPRQTLDSYTVKRINKTIK                     AGDCVLMRP EPSKP
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIK---------------------AGDCVLMRPPEPSKP 60

Query: 109 SYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEG 168
           SYVAKIEKIEADSRGANVKVH+RWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEG
Sbjct: 61  SYVAKIEKIEADSRGANVKVHIRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEG 120

Query: 169 KCTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCES 228
           KCTVH+FK+YTKLDAVGN+DYFCRFDY+S TGAFNPDRVAVYCKCEMPYNPDDLMVQCES
Sbjct: 121 KCTVHSFKSYTKLDAVGNEDYFCRFDYSSTTGAFNPDRVAVYCKCEMPYNPDDLMVQCES 180

Query: 229 CSDWFHPACIEMTAEEAKKLDHFFCESCSSE 260
           C+DWFHPACIEMTAEEAKKLDHFFCESCSSE
Sbjct: 181 CTDWFHPACIEMTAEEAKKLDHFFCESCSSE 190

[Close]

BLAST of Spg013965 vs. TAIR 10
Match: AT4G22140.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 307.4 bits (786), Expect = 1.2e-83
Identity = 143/214 (66.82%), Postives = 164/214 (76.64%), Query Frame = 0


Query: 50  AKPKAPRQTLDSYTVKRINKTIKDGSIFLSVSDLAEFFAFLFFLAGDCVLMRPSEPSKPS 109
           +K K  R+ LDSYT+K  NK ++                     AGDCVLMRPS+  KP 
Sbjct: 10  SKIKTGRKELDSYTIKGTNKVVR---------------------AGDCVLMRPSDAGKPP 69

Query: 110 YVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK 169
           YVA++EKIEAD+R  NVKVH RWYYRPEES+GGRRQFHG+KELFLSDH+DVQSA TIEGK
Sbjct: 70  YVARVEKIEADARN-NVKVHCRWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGK 129

Query: 170 CTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCESC 229
           C VHTFKNYT+L+ VG +DY+CRF+Y +ATGAF PDRVAVYCKCEMPYNPDDLMVQCE C
Sbjct: 130 CIVHTFKNYTRLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGC 189

Query: 230 SDWFHPACIEMTAEEAKKLDHFFCESCSSEGGYK 264
            DW+HPAC+ MT EEAKKLDHF C  CSS+   K
Sbjct: 190 KDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVK 201

[Close]

BLAST of Spg013965 vs. TAIR 10
Match: AT4G22140.2 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 307.4 bits (786), Expect = 1.2e-83
Identity = 143/214 (66.82%), Postives = 164/214 (76.64%), Query Frame = 0


Query: 50  AKPKAPRQTLDSYTVKRINKTIKDGSIFLSVSDLAEFFAFLFFLAGDCVLMRPSEPSKPS 109
           +K K  R+ LDSYT+K  NK ++                     AGDCVLMRPS+  KP 
Sbjct: 10  SKIKTGRKELDSYTIKGTNKVVR---------------------AGDCVLMRPSDAGKPP 69

Query: 110 YVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK 169
           YVA++EKIEAD+R  NVKVH RWYYRPEES+GGRRQFHG+KELFLSDH+DVQSA TIEGK
Sbjct: 70  YVARVEKIEADARN-NVKVHCRWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGK 129

Query: 170 CTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCESC 229
           C VHTFKNYT+L+ VG +DY+CRF+Y +ATGAF PDRVAVYCKCEMPYNPDDLMVQCE C
Sbjct: 130 CIVHTFKNYTRLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGC 189

Query: 230 SDWFHPACIEMTAEEAKKLDHFFCESCSSEGGYK 264
            DW+HPAC+ MT EEAKKLDHF C  CSS+   K
Sbjct: 190 KDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVK 201

[Close]

BLAST of Spg013965 vs. TAIR 10
Match: AT4G39100.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 305.4 bits (781), Expect = 4.4e-83
Identity = 140/211 (66.35%), Postives = 165/211 (78.20%), Query Frame = 0


Query: 49  MAKPKAPRQTLDSYTVKRINKTIKDGSIFLSVSDLAEFFAFLFFLAGDCVLMRPSEPSKP 108
           M K KAPR+ L SY +K INK+I++                     GD VLMR SEP KP
Sbjct: 1   MPKQKAPRKQLKSYKLKHINKSIQE---------------------GDAVLMRSSEPGKP 60

Query: 109 SYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEG 168
           SYVA++E IE D+RG++ KV VRWYYRPEESIGGRRQFHG+KE+FLSDH+D QSADTIEG
Sbjct: 61  SYVARVEAIETDARGSHAKVRVRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEG 120

Query: 169 KCTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCES 228
           KC VH+F +YTKLD+VGNDD+FCRF+YNS TGAF+PDRV V+CKCEMPYNPDDLMVQCE 
Sbjct: 121 KCKVHSFSSYTKLDSVGNDDFFCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEE 180

Query: 229 CSDWFHPACIEMTAEEAKKLDHFFCESCSSE 260
           CS+WFHP+CI  T EEAKK D+F+CE CS +
Sbjct: 181 CSEWFHPSCIGTTIEEAKKPDNFYCEECSPQ 190

[Close]

BLAST of Spg013965 vs. TAIR 10
Match: AT4G39100.2 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 266.5 bits (680), Expect = 2.3e-71
Identity = 123/184 (66.85%), Postives = 144/184 (78.26%), Query Frame = 0


Query: 49  MAKPKAPRQTLDSYTVKRINKTIKDGSIFLSVSDLAEFFAFLFFLAGDCVLMRPSEPSKP 108
           M K KAPR+ L SY +K INK+I++                     GD VLMR SEP KP
Sbjct: 1   MPKQKAPRKQLKSYKLKHINKSIQE---------------------GDAVLMRSSEPGKP 60

Query: 109 SYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEG 168
           SYVA++E IE D+RG++ KV VRWYYRPEESIGGRRQFHG+KE+FLSDH+D QSADTIEG
Sbjct: 61  SYVARVEAIETDARGSHAKVRVRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEG 120

Query: 169 KCTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCES 228
           KC VH+F +YTKLD+VGNDD+FCRF+YNS TGAF+PDRV V+CKCEMPYNPDDLMVQCE 
Sbjct: 121 KCKVHSFSSYTKLDSVGNDDFFCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEE 163

Query: 229 CSDW 233
           CS+W
Sbjct: 181 CSEW 163

[Close]

BLAST of Spg013965 vs. TAIR 10
Match: AT4G04260.1 (Bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 229.6 bits (584), Expect = 3.1e-60
Identity = 110/160 (68.75%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 100 MRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYD 159
           MRPS+  K  YVA++EKIEAD+R  NVKVH RWYY PEES GGRRQ HG+KELFLSDH+D
Sbjct: 1   MRPSDAGKAPYVARVEKIEADARN-NVKVHCRWYYCPEESHGGRRQLHGAKELFLSDHFD 60

Query: 160 VQSADTIEGKCTVHTFKNYTKLDAVGNDDYFCRFDYNSATGAFNPDRVAVYCKCEMPYNP 219
           VQSA TIEGKC VHTFKNYT+L+ VG +DY+C FDY +ATGAF PDRVAVY KCEMPYN 
Sbjct: 61  VQSAHTIEGKCIVHTFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYKCEMPYNS 120

Query: 220 DDLMVQCESCSDWFHPACIEMTAEEAKKLDHFFCESCSSE 260
           D+LM +   C    H AC+ +T EEAKKL+HF C  CSS+
Sbjct: 121 DELM-ELLLCHYRVHLACVGVTIEEAKKLEHFVCVECSSD 158

The following BLAST results are available for this feature:

BLAST of Spg013965 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011722.1	1.7e-113	87.18	Chromatin remodeling protein SHL, partial [Cucurbita argyrosperma subsp. argyros...	[more]
KAG6572055.1	2.7e-106	87.50	Chromatin remodeling protein SHL, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022135772.1	3.5e-106	83.56	chromatin remodeling protein SHL-like [Momordica charantia]	[more]
XP_038889039.1	1.0e-105	87.91	chromatin remodeling protein SHL-like [Benincasa hispida]	[more]
XP_008448075.2	3.8e-105	87.44	PREDICTED: chromatin remodeling protein SHL-like [Cucumis melo]	[more]

BLAST of Spg013965 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JL28	1.6e-82	66.82	Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=...	[more]
Q9FEN9	6.2e-82	66.35	Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=...	[more]
F4JGB7	1.0e-63	61.73	Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04...	[more]
O75151	2.4e-09	39.66	Lysine-specific demethylase PHF2 OS=Homo sapiens OX=9606 GN=PHF2 PE=1 SV=4	[more]
Q9WTU0	2.4e-09	39.66	Lysine-specific demethylase PHF2 OS=Mus musculus OX=10090 GN=Phf2 PE=1 SV=2	[more]

BLAST of Spg013965 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C3P9	1.7e-106	83.56	chromatin remodeling protein SHL-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A1S3BJS6	1.9e-105	87.44	chromatin remodeling protein SHL-like OS=Cucumis melo OX=3656 GN=LOC103490361 PE...	[more]
A0A0A0K4E7	4.1e-105	86.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004100 PE=4 SV=1	[more]
A0A6J1I8K6	6.0e-104	85.45	chromatin remodeling protein SHL isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1IJS1	8.7e-103	86.26	chromatin remodeling protein SHL-like isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of Spg013965 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22140.1	1.2e-83	66.82	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G22140.2	1.2e-83	66.82	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G39100.1	4.4e-83	66.35	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G39100.2	2.3e-71	66.85	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G04260.1	3.1e-60	68.75	Bromo-adjacent homology (BAH) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 210..257 e-value: 9.8E-9 score: 45.0
IPR001025	Bromo adjacent homology (BAH) domain	SMART	SM00439	BAH_4	coord: 90..206 e-value: 1.2E-40 score: 151.1
IPR001025	Bromo adjacent homology (BAH) domain	PFAM	PF01426	BAH	coord: 94..205 e-value: 1.5E-21 score: 76.5
IPR001025	Bromo adjacent homology (BAH) domain	PROSITE	PS51038	BAH	coord: 90..206 score: 23.51074
IPR043151	Bromo adjacent homology (BAH) domain superfamily	GENE3D	2.30.30.490		coord: 91..202 e-value: 5.1E-31 score: 109.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 203..269 e-value: 4.2E-20 score: 72.9
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 210..258 e-value: 9.0E-10 score: 38.3
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 208..259 score: 9.223
None	No IPR available	PANTHER	PTHR46364	OS08G0421900 PROTEIN	coord: 49..262
None	No IPR available	PANTHER	PTHR46364:SF7	CHROMATIN REMODELING PROTEIN SHL	coord: 49..262
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 211..256
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 200..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg013965.1	Spg013965.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0035067	negative regulation of histone acetylation
biological_process	GO:2000028	regulation of photoperiodism, flowering
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0035064	methylated histone binding
molecular_function	GO:0000976	transcription cis-regulatory region binding