Spg013834 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg013834
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Auxin-responsive protein
Location	scaffold3: 47793886 .. 47796304 (-)
RNA-Seq Expression	Spg013834
Synteny	Spg013834

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATATATCCCTCTTTCAATTTCCAATCCCTTTTCATTTTCCCATCCCTAAAAAACACAAGCCCCATCTTTCAACAATGGCAAAAGAAGCCCTTGGACTCGAGATCACCGAGCTTCGCCTCGGTCTCCCCGGCAACAGCGACAAAAATGAGAAGAAACGAGTCTATGCTGACATCGTTGCTGGTGGAGACGAGCCGACCAGGGACGATGTCGGAAGGAAGAATAATGCGAGTAAGGGACAGGTCGTGGGGTGGCCACCGGTGTGTTCGTATCGGAAAAAGAATAGTTTTGGAGAGAAAGAGTCGTCGTCGTCGTTGCATGAGAATGAGAATTCGAAAATGTACGTGAAGATCAGCATGGATGGAGCTCCATTTCTGCGTAAACTTGACTTGGGTTCTCATAAAGGATACTCGGATCTTGCCCTTGCTCTTGAAAAGCTCTTTGCTTGCTTTGGAACTGGTAAATTTAGAGCTCTTTCTCACCTTTAATTTGTTATTCATTTTCTATCTCTTTTCTTTTAAACTTTTTTTAGGGTTTATGTAGTAACGTGCTTAATAAGTTAATATTGCATGGTAAATTATATGAGAGATTTATAGTCATTTAATTTGTAGCAATATTTCGAGGAATTTGATGTGTAAATAAAGAGTAACATATTTGGAAGAGGAAATTCTTACTGATTTATTGAGTTTTGTACTGTGTGATGTGAAAAAAAATAATAATAATTGAGTTAGTAAAAAATAGGATGGACTCAAGAAAATTTTATGAGAAATGAAGCAAAATTGTTATATACATAATTTTCCAATTTTTGAAAAAATTAGGGGAGAAATCAGAAGAAGTATAAGATAAAATACATAATATTAGATGCATATTTGTTTATTTATTTTTAAATAAAAAGAAGAAGTATTTATGTAGAAAAATATAATGAGAAAGTAGTGGCATATTTGTAAAATGACAGGGAAGACATTAAAGCATGGAGAAAGTTCTGATTACGTTCCCATTTATGAGGACAAGGATGGGGACTGGATGCTTGTTGGAGACGTCCCTTGGGAGTAAGTTTTACTCTTTTTTTTTTTTCTTCTCTCTAAATTTATTTTTTTTTATTTTTTTTTTATCAAACTCAATTTTTCACTCATATTTCATTTACATCTTTGATATAATTATATTTTGTGTTGCATAATTTTAAAAATTAATTTCAGAGTTAAAATCCTACCTATTTTGTTTGATCCTCATGCATCGACTCATGATATAGTGTGAGTTTTAATGTCAAGGATTGAATGAATATAGTTTTAAAACTATAAGAATTAAATTGCTATCAGAGAAACAAAATGCAAGAGTTAAAAAGTATATTTTAGACTTTCTTGTTTAGTATTTGTTATATACTTTAATCTGAAATACTTTAAGATGTTTTATTCTTGTCTCTTAAATTTTTAAAAAGGAATTATTTTGATCATTATTGTTAAACTCCGTGTTGCAACTAACGTACATTATATATAAGATTAGATTTATATATTTATATATATAATGAAAACCATAACAGTTTTTTTTATATAGAAAACCAAAATCAAATATTTTTAAAGTACAGGGACGGAATCAAAATAAAATATTTTGGAAAATATATATTTATTTATTTTGTTTTTGGTGTTACCGTTGTTACCGGTGTTTTAAATTCTATTTGATTTGATTAATACAAATTGTGATTAAGAATATGTTGTTTGACATTTAATTATGAAGAGAGGTACAGAGAGGGCAAAATAGTCATTTTAGACTCCCATCCCATTCATTAACTCACACAACATGATGCCGACATGAACCAAACCTTAATAATAGTGTCAGCTAGATTACAAAGTTGTCCTCAATTCAATTCCCCTTGCCCCCTCCCCGACATATCCCATGCCTAATTTAAAATCATAATAATCCAATTTGATATATATTTTTTTAAAAAAAAATGATTAGTCTCTAATTATAATTATAATTAACAAAATAATAATAATAATAATAATAATAACAATATTTTGCAGCATGTTTATTGAATCGTGCAAGAGGCTGAGGATAATGAAGAGATCAGAGGCCAAAGGGTTCGGCCTGCAATTTAAGGATCTATAAGTAGAAGAAGAAAGAAGAAGAAGATGCTCCTTTACCCGAGGAAATATATTTGGGTTAATTTTTATATTTGTAATCTTTTCGTTAATTGTTATGACTTTATTTGGTTTAAGAATAGACATAAAAGTAATTCACATAATTAATATAGGACCTCTCTATTAATTGTTTAGTTAATTGTCAATGTCACATGTGTGATTTTATTTTAGGAGAGACATATAAGAATAGTAATATATGAAGTTTGTTTACTTAATATGGATACATTAGTTTTGTTTTGGTATTCATCTTCAATTATTGACTTCTAGTTTAGGCTGTTGAGCTAT

mRNA sequence

ATGGCAAAAGAAGCCCTTGGACTCGAGATCACCGAGCTTCGCCTCGGTCTCCCCGGCAACAGCGACAAAAATGAGAAGAAACGAGTCTATGCTGACATCGTTGCTGGTGGAGACGAGCCGACCAGGGACGATGTCGGAAGGAAGAATAATGCGAGTAAGGGACAGGTCGTGGGGTGGCCACCGGTGTGTTCGTATCGGAAAAAGAATAGTTTTGGAGAGAAAGAGTCGTCGTCGTCGTTGCATGAGAATGAGAATTCGAAAATGTACGTGAAGATCAGCATGGATGGAGCTCCATTTCTGCGTAAACTTGACTTGGGTTCTCATAAAGGATACTCGGATCTTGCCCTTGCTCTTGAAAAGCTCTTTGCTTGCTTTGGAACTGGGAAGACATTAAAGCATGGAGAAAGTTCTGATTACGTTCCCATTTATGAGGACAAGGATGGGGACTGGATGCTTGTTGGAGACGTCCCTTGGGACATGTTTATTGAATCGTGCAAGAGGCTGAGGATAATGAAGAGATCAGAGGCCAAAGGGTTCGGCCTGCAATTTAAGGATCTATAA

Coding sequence (CDS)

ATGGCAAAAGAAGCCCTTGGACTCGAGATCACCGAGCTTCGCCTCGGTCTCCCCGGCAACAGCGACAAAAATGAGAAGAAACGAGTCTATGCTGACATCGTTGCTGGTGGAGACGAGCCGACCAGGGACGATGTCGGAAGGAAGAATAATGCGAGTAAGGGACAGGTCGTGGGGTGGCCACCGGTGTGTTCGTATCGGAAAAAGAATAGTTTTGGAGAGAAAGAGTCGTCGTCGTCGTTGCATGAGAATGAGAATTCGAAAATGTACGTGAAGATCAGCATGGATGGAGCTCCATTTCTGCGTAAACTTGACTTGGGTTCTCATAAAGGATACTCGGATCTTGCCCTTGCTCTTGAAAAGCTCTTTGCTTGCTTTGGAACTGGGAAGACATTAAAGCATGGAGAAAGTTCTGATTACGTTCCCATTTATGAGGACAAGGATGGGGACTGGATGCTTGTTGGAGACGTCCCTTGGGACATGTTTATTGAATCGTGCAAGAGGCTGAGGATAATGAAGAGATCAGAGGCCAAAGGGTTCGGCCTGCAATTTAAGGATCTATAA

Protein sequence

MAKEALGLEITELRLGLPGNSDKNEKKRVYADIVAGGDEPTRDDVGRKNNASKGQVVGWPPVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLRKLDLGSHKGYSDLALALEKLFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLRIMKRSEAKGFGLQFKDL

Homology

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BLAST of Spg013834 vs. NCBI nr
Match: XP_004135828.1 (auxin-induced protein IAA6 [Cucumis sativus])

HSP 1 Score: 338.6 bits (867), Expect = 3.5e-89
Identity = 170/194 (87.63%), Postives = 177/194 (91.24%), Query Frame = 0


Query: 1   MAKEALGLEITELR--LGLPGNSDKNEKKRVYADIVAGGDEPTRDD----VGRKNN--AS 60
           MAKE+LG EITELR  LGLPGNS+KNEKKR + DIV G  EPTRD+    VGRKN+   S
Sbjct: 1   MAKESLGFEITELRLGLGLPGNSNKNEKKRAFDDIVNGDHEPTRDNDDNRVGRKNSNTTS 60

Query: 61  KGQVVGWPPVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLRKLDLGSHKGYS 120
           KGQVVGWPPVCSYRK+NSFGEKESSS LHENENSKMYVKISMDGAPFLRKLDLGSHKGYS
Sbjct: 61  KGQVVGWPPVCSYRKRNSFGEKESSSLLHENENSKMYVKISMDGAPFLRKLDLGSHKGYS 120

Query: 121 DLALALEKLFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLRIMK 180
           DLALALEKLFACFGTGKTLKHGES DYVPIYEDKDGDWMLVGDVPW+MFIESCKRLRIMK
Sbjct: 121 DLALALEKLFACFGTGKTLKHGESCDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMK 180

Query: 181 RSEAKGFGLQFKDL 187
           RSEAKGFGLQFKDL
Sbjct: 181 RSEAKGFGLQFKDL 194

[Close]

BLAST of Spg013834 vs. NCBI nr
Match: KAG7014105.1 (Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 337.4 bits (864), Expect = 7.7e-89
Identity = 168/187 (89.84%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 1   MAKEALGLEITELRLGLPGNSDKNEKKRVYADIVAGGDEPTRDDVGRKNN-ASKGQVVGW 60
           MA E+LGLEITELRLGLPGN+DKNEKKR YADIV   DEPTRDDVGRKNN  SKGQVVGW
Sbjct: 56  MANESLGLEITELRLGLPGNNDKNEKKRAYADIV-DEDEPTRDDVGRKNNTTSKGQVVGW 115

Query: 61  PPVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLRKLDLGSHKGYSDLALALE 120
           PPVCSYRKKNSFGEKE   SL +NENSKMYVKISMDGAPFLRKLDLGSH+GYSDLA+ALE
Sbjct: 116 PPVCSYRKKNSFGEKE---SLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALE 175

Query: 121 KLFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLRIMKRSEAKGF 180
           KLFACFGTGKT KHGESSDYVPIYEDKDGDWMLVGDVPW+MF+ESCKRLRIMKRSEAKGF
Sbjct: 176 KLFACFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGF 235

Query: 181 GLQFKDL 187
           GLQFKDL
Sbjct: 236 GLQFKDL 238

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BLAST of Spg013834 vs. NCBI nr
Match: XP_038899110.1 (auxin-induced protein AUX22-like [Benincasa hispida])

HSP 1 Score: 336.3 bits (861), Expect = 1.7e-88
Identity = 167/187 (89.30%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 1   MAKEALGLEITELRLGLPGNSDKNEKKRVYADIVAGGDEPTRDDVGRKNNAS-KGQVVGW 60
           MAKE+LGLEITELRLGLPGN DKNEKKRVYADIV   DEP RDDV +KN+ + KGQVVGW
Sbjct: 1   MAKESLGLEITELRLGLPGNDDKNEKKRVYADIV-NEDEPARDDVEQKNSMTIKGQVVGW 60

Query: 61  PPVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLRKLDLGSHKGYSDLALALE 120
           PPVCSYRKKNSFGEKE  S+LHE+ENSKMYVKISMDGAPFLRKLDLGSHKGYSDLALAL+
Sbjct: 61  PPVCSYRKKNSFGEKE--STLHESENSKMYVKISMDGAPFLRKLDLGSHKGYSDLALALQ 120

Query: 121 KLFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLRIMKRSEAKGF 180
           KLFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPW+MFIESCKRLRIMKR EAKGF
Sbjct: 121 KLFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRCEAKGF 180

Query: 181 GLQFKDL 187
            LQFKDL
Sbjct: 181 ALQFKDL 184

[Close]

BLAST of Spg013834 vs. NCBI nr
Match: XP_008461049.1 (PREDICTED: auxin-induced protein IAA6 isoform X1 [Cucumis melo])

HSP 1 Score: 335.5 bits (859), Expect = 2.9e-88
Identity = 172/194 (88.66%), Postives = 178/194 (91.75%), Query Frame = 0


Query: 1   MAKEALGLEITELR--LGLPGNSDKNEKKRVYADIVAGGDEPTR--DDVGRKNN--ASKG 60
           MAKE+LGL+ITELR  LGLPGNSDKNEKKR Y DIV GG EPTR  DDVGRKN+   SKG
Sbjct: 68  MAKESLGLDITELRLGLGLPGNSDKNEKKRAYNDIVNGGHEPTRDGDDVGRKNSNATSKG 127

Query: 61  QVVGWPPVCSYRKKNSFGEKESSSSL-HENENSKMYVKISMDGAPFLRKLDLGSHKGYSD 120
           QVVGWPPVCSYRK+NSFGEKESSSSL HENENSKMYVKISMDGAPFLRKLDLGSHK YSD
Sbjct: 128 QVVGWPPVCSYRKRNSFGEKESSSSLPHENENSKMYVKISMDGAPFLRKLDLGSHKDYSD 187

Query: 121 LALALEKLFACFG-TGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLRIMK 180
           LA+ALEKLF CFG TGKTLKHGES DYVPIYEDKDGDWMLVGDVPW+MFIESCKRLRIMK
Sbjct: 188 LAVALEKLFGCFGSTGKTLKHGESCDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMK 247

Query: 181 RSEAKGFGLQFKDL 187
           RSEAKGFGLQFKDL
Sbjct: 248 RSEAKGFGLQFKDL 261

[Close]

BLAST of Spg013834 vs. NCBI nr
Match: KAG6575564.1 (Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 335.5 bits (859), Expect = 2.9e-88
Identity = 167/187 (89.30%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 1   MAKEALGLEITELRLGLPGNSDKNEKKRVYADIVAGGDEPTRDDVGRKNN-ASKGQVVGW 60
           MA E+LGLEITELRLGLPGN+DKNEKKR YADIV   DEPTRDDVGRKNN  SKGQVVGW
Sbjct: 1   MANESLGLEITELRLGLPGNNDKNEKKRAYADIV-DEDEPTRDDVGRKNNTTSKGQVVGW 60

Query: 61  PPVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLRKLDLGSHKGYSDLALALE 120
           PPVCSYRKKNSFGEKE   SL +NENSKMYVKISMDGAPFLRKLDLGSH+GYSDLA+ALE
Sbjct: 61  PPVCSYRKKNSFGEKE---SLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALE 120

Query: 121 KLFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLRIMKRSEAKGF 180
           KLFACFGTGKT KHGESS+YVPIYEDKDGDWMLVGDVPW+MF+ESCKRLRIMKRSEAKGF
Sbjct: 121 KLFACFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGF 180

Query: 181 GLQFKDL 187
           GLQFKDL
Sbjct: 181 GLQFKDL 183

[Close]

BLAST of Spg013834 vs. ExPASy Swiss-Prot
Match: P13088 (Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 6.8e-64
Identity = 127/193 (65.80%), Postives = 147/193 (76.17%), Query Frame = 0


Query: 1   MAKEALGLEITELRLGLPGN-------SDKNEKKRVYADIVAG-GDEPTRDDVG-RKNNA 60
           MAKE LGLEITELRLGLP         + KNEKKR +++I  G GDE +    G RK   
Sbjct: 1   MAKEGLGLEITELRLGLPDAEHQVSVVNKKNEKKRAFSEIDDGVGDENSSSGGGDRKMET 60

Query: 61  SKGQVVGWPPVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLRKLDLGSHKGY 120
           +K QVVGWPPVCSYRKKNS  E            SKMYVK+SMDGAPFLRK+DLG HKGY
Sbjct: 61  NKSQVVGWPPVCSYRKKNSMNEGA----------SKMYVKVSMDGAPFLRKIDLGLHKGY 120

Query: 121 SDLALALEKLFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLRIM 180
           SDLALAL+KLF C+G  + LK+ ++S++VPIYEDKDGDWMLVGDVPW+MF+ESCKRLRIM
Sbjct: 121 SDLALALDKLFGCYGMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIM 180

Query: 181 KRSEAKGFGLQFK 185
           K+S+AKGFGLQ K
Sbjct: 181 KKSDAKGFGLQPK 183

[Close]

BLAST of Spg013834 vs. ExPASy Swiss-Prot
Match: P32293 (Auxin-induced protein 22A OS=Vigna radiata var. radiata OX=3916 GN=AUX22A PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.9e-61
Identity = 122/193 (63.21%), Postives = 143/193 (74.09%), Query Frame = 0


Query: 1   MAKEALGLEITELRLGLP--------GNSDKNEKKRVYADIVAGGDE-PTRDDVGRKNNA 60
           MAKE LGLEITELRLGLP          + + + KRV+++I   GDE  +    G +   
Sbjct: 1   MAKEGLGLEITELRLGLPDAEHVAVANKNGEKKNKRVFSEIDDVGDENSSSGGGGDRKME 60

Query: 61  SKGQVVGWPPVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLRKLDLGSHKGY 120
           +K QVVGWPPVCSYRKKNS            NE SKMYVK+SMDGAPFLRK+DLG HKGY
Sbjct: 61  NKNQVVGWPPVCSYRKKNSV-----------NEASKMYVKVSMDGAPFLRKMDLGMHKGY 120

Query: 121 SDLALALEKLFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLRIM 180
           SDLA ALEKLF C+G  + LK+ E+ ++VPIYEDKDGDWMLVGDVPW+MF+ESCKRLRIM
Sbjct: 121 SDLAFALEKLFGCYGMVEALKNVENGEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIM 180

Query: 181 KRSEAKGFGLQFK 185
           KR++AKGFGLQ K
Sbjct: 181 KRADAKGFGLQPK 182

[Close]

BLAST of Spg013834 vs. ExPASy Swiss-Prot
Match: P49680 (Auxin-induced protein IAA6 OS=Pisum sativum OX=3888 GN=IAA6 PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 7.8e-60
Identity = 121/185 (65.41%), Postives = 138/185 (74.59%), Query Frame = 0


Query: 1   MAKEALGLEITELRLGLP-GNSDKNEKKRVYADIVAGGDEPTRDDVGRKNNASKGQVVGW 60
           MA+E LGLEITELRLGL  G   KNEKKR++++I  GG E       RK+   K QVVGW
Sbjct: 1   MAREGLGLEITELRLGLSCGEPKKNEKKRMFSEI-DGGVEENGGSGDRKSVDKKNQVVGW 60

Query: 61  PPVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLRKLDLGSHKGYSDLALALE 120
           PPVCSYRKKN             NE SKMY+K+SMDGAP+LRK+DL  HKGY +LALALE
Sbjct: 61  PPVCSYRKKNM------------NEGSKMYMKVSMDGAPYLRKIDLCLHKGYLELALALE 120

Query: 121 KLFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLRIMKRSEAKGF 180
           KLF C G  + LK  E+ ++VPIYEDKDGDWMLVGDVPW+MFIESCKRLRIMKRS+AKGF
Sbjct: 121 KLFDCCGIEEALKDAENCEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKGF 172

Query: 181 GLQFK 185
            LQ K
Sbjct: 181 DLQPK 172

[Close]

BLAST of Spg013834 vs. ExPASy Swiss-Prot
Match: O24541 (Auxin-induced protein 22C OS=Vigna radiata var. radiata OX=3916 GN=AUX22C PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 5.1e-59
Identity = 119/192 (61.98%), Postives = 143/192 (74.48%), Query Frame = 0


Query: 1   MAKEALGLEITELRLGLPG-----NSDKNE---KKRVYADIVAGGDEPTRDDVGRKNNAS 60
           M KE LGLEITELRLGLPG     N+DK++   KKRV++DI   G+  + ++ G+K   +
Sbjct: 1   MEKEDLGLEITELRLGLPGAGGENNTDKDKNKNKKRVFSDI--EGENSSSEEDGKKE--T 60

Query: 61  KGQVVGWPPVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLRKLDLGSHKGYS 120
           K QVVGWPPVCSYRKKN+  E             K+YVK+SMDGAPFLRK+DL  HKGYS
Sbjct: 61  KNQVVGWPPVCSYRKKNTVNE------------PKLYVKVSMDGAPFLRKIDLAMHKGYS 120

Query: 121 DLALALEKLFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLRIMK 180
           DLA AL+K F C+G  + LK  E++++VPIYEDKDGDWMLVGDVPW+MF ESCKRLRIMK
Sbjct: 121 DLAFALDKFFGCYGICEALKDAENAEHVPIYEDKDGDWMLVGDVPWEMFRESCKRLRIMK 176

Query: 181 RSEAKGFGLQFK 185
           RS+AKGF LQ K
Sbjct: 181 RSDAKGFDLQPK 176

[Close]

BLAST of Spg013834 vs. ExPASy Swiss-Prot
Match: O24409 (Auxin-responsive protein IAA19 OS=Arabidopsis thaliana OX=3702 GN=IAA19 PE=1 SV=2)

HSP 1 Score: 209.1 bits (531), Expect = 4.2e-53
Identity = 114/201 (56.72%), Postives = 137/201 (68.16%), Query Frame = 0


Query: 1   MAKEALGLEITELRLGLPGN--SDKNEKKRVYAD-----------------IVAGGDEPT 60
           M KE LGLEITELRLGLPG   ++K  KKR + +                 + +GGD   
Sbjct: 1   MEKEGLGLEITELRLGLPGRDVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGDAEK 60

Query: 61  RDDVGRKNNASKGQVVGWPPVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLR 120
            +D    + A+K QVVGWPPVCSYRKKNS   KE+S++    +    YVK+SMDG P+LR
Sbjct: 61  VND----SPAAKSQVVGWPPVCSYRKKNSC--KEASTT----KVGLGYVKVSMDGVPYLR 120

Query: 121 KLDLGSHKGYSDLALALEKLFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMF 180
           K+DLGS +GY DLA AL+KLF   G G  LK G++ +YV IYEDKDGDWML GDVPW MF
Sbjct: 121 KMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAGDVPWGMF 180

Query: 181 IESCKRLRIMKRSEAKGFGLQ 183
           +ESCKRLRIMKRS+A GFGLQ
Sbjct: 181 LESCKRLRIMKRSDATGFGLQ 191

[Close]

BLAST of Spg013834 vs. ExPASy TrEMBL
Match: A0A0A0KC02 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_7G440550 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.7e-89
Identity = 170/194 (87.63%), Postives = 177/194 (91.24%), Query Frame = 0


Query: 1   MAKEALGLEITELR--LGLPGNSDKNEKKRVYADIVAGGDEPTRDD----VGRKNN--AS 60
           MAKE+LG EITELR  LGLPGNS+KNEKKR + DIV G  EPTRD+    VGRKN+   S
Sbjct: 1   MAKESLGFEITELRLGLGLPGNSNKNEKKRAFDDIVNGDHEPTRDNDDNRVGRKNSNTTS 60

Query: 61  KGQVVGWPPVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLRKLDLGSHKGYS 120
           KGQVVGWPPVCSYRK+NSFGEKESSS LHENENSKMYVKISMDGAPFLRKLDLGSHKGYS
Sbjct: 61  KGQVVGWPPVCSYRKRNSFGEKESSSLLHENENSKMYVKISMDGAPFLRKLDLGSHKGYS 120

Query: 121 DLALALEKLFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLRIMK 180
           DLALALEKLFACFGTGKTLKHGES DYVPIYEDKDGDWMLVGDVPW+MFIESCKRLRIMK
Sbjct: 121 DLALALEKLFACFGTGKTLKHGESCDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMK 180

Query: 181 RSEAKGFGLQFKDL 187
           RSEAKGFGLQFKDL
Sbjct: 181 RSEAKGFGLQFKDL 194

[Close]

BLAST of Spg013834 vs. ExPASy TrEMBL
Match: A0A1S3CF19 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103499752 PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.4e-88
Identity = 172/194 (88.66%), Postives = 178/194 (91.75%), Query Frame = 0


Query: 1   MAKEALGLEITELR--LGLPGNSDKNEKKRVYADIVAGGDEPTR--DDVGRKNN--ASKG 60
           MAKE+LGL+ITELR  LGLPGNSDKNEKKR Y DIV GG EPTR  DDVGRKN+   SKG
Sbjct: 68  MAKESLGLDITELRLGLGLPGNSDKNEKKRAYNDIVNGGHEPTRDGDDVGRKNSNATSKG 127

Query: 61  QVVGWPPVCSYRKKNSFGEKESSSSL-HENENSKMYVKISMDGAPFLRKLDLGSHKGYSD 120
           QVVGWPPVCSYRK+NSFGEKESSSSL HENENSKMYVKISMDGAPFLRKLDLGSHK YSD
Sbjct: 128 QVVGWPPVCSYRKRNSFGEKESSSSLPHENENSKMYVKISMDGAPFLRKLDLGSHKDYSD 187

Query: 121 LALALEKLFACFG-TGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLRIMK 180
           LA+ALEKLF CFG TGKTLKHGES DYVPIYEDKDGDWMLVGDVPW+MFIESCKRLRIMK
Sbjct: 188 LAVALEKLFGCFGSTGKTLKHGESCDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMK 247

Query: 181 RSEAKGFGLQFKDL 187
           RSEAKGFGLQFKDL
Sbjct: 248 RSEAKGFGLQFKDL 261

[Close]

BLAST of Spg013834 vs. ExPASy TrEMBL
Match: A0A6J1GPU1 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111456436 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.2e-88
Identity = 167/187 (89.30%), Postives = 173/187 (92.51%), Query Frame = 0


Query: 1   MAKEALGLEITELRLGLPGNSDKNEKKRVYADIVAGGDEPTRDDVGRKNN-ASKGQVVGW 60
           MA E+LGLEITELRLGLPGN+DKNEKKR YADIV   DEPTRDDV RKNN  SKGQVVGW
Sbjct: 1   MANESLGLEITELRLGLPGNNDKNEKKRAYADIV-DEDEPTRDDVDRKNNTTSKGQVVGW 60

Query: 61  PPVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLRKLDLGSHKGYSDLALALE 120
           PPVCSYRKKNSFGEKE   SL +NENSKMYVKISMDGAPFLRKLDLGSH+GYSDLA+ALE
Sbjct: 61  PPVCSYRKKNSFGEKE---SLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALE 120

Query: 121 KLFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLRIMKRSEAKGF 180
           KLF CFGTGKT KHGESSDYVPIYEDKDGDWMLVGDVPW+MFIESCKRLRIMKRSEAKGF
Sbjct: 121 KLFGCFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKGF 180

Query: 181 GLQFKDL 187
           GLQFKDL
Sbjct: 181 GLQFKDL 183

[Close]

BLAST of Spg013834 vs. ExPASy TrEMBL
Match: A0A6J1JTD7 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111488703 PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.5e-87
Identity = 165/187 (88.24%), Postives = 173/187 (92.51%), Query Frame = 0


Query: 1   MAKEALGLEITELRLGLPGNSDKNEKKRVYADIVAGGDEPTRDDVGRKNN-ASKGQVVGW 60
           MA E+LGLEITELRLGLPGN++KNEKKR YADI+   DEPTRD VGRKNN  SKGQVVGW
Sbjct: 56  MANESLGLEITELRLGLPGNNNKNEKKRAYADII-DEDEPTRDSVGRKNNTTSKGQVVGW 115

Query: 61  PPVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLRKLDLGSHKGYSDLALALE 120
           PPVCSYRKKNSFGEKE   SL ++EN KMYVKISMDGAPFLRKLDLGSH+GYSDLALALE
Sbjct: 116 PPVCSYRKKNSFGEKE---SLLKSENLKMYVKISMDGAPFLRKLDLGSHQGYSDLALALE 175

Query: 121 KLFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLRIMKRSEAKGF 180
           KLFACFGTGKT KHGESSDYVPIYEDKDGDWMLVGDVPW+MFIESCKRLRIMKRSEAKGF
Sbjct: 176 KLFACFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKGF 235

Query: 181 GLQFKDL 187
           GLQFKDL
Sbjct: 236 GLQFKDL 238

[Close]

BLAST of Spg013834 vs. ExPASy TrEMBL
Match: A0A6J1L0Q4 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498041 PE=3 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.1e-85
Identity = 160/186 (86.02%), Postives = 168/186 (90.32%), Query Frame = 0


Query: 1   MAKEALGLEITELRLGLPGNSDKNEKKRVYADIVAGGDEPTRDDVGRKNNASKGQVVGWP 60
           M KE LGLEITELRLGLPGN +KNEKKR Y  IV G DEPTRD+V RKNN SKGQVVGWP
Sbjct: 78  MEKEPLGLEITELRLGLPGNGEKNEKKRAYVAIV-GEDEPTRDNVERKNNMSKGQVVGWP 137

Query: 61  PVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLRKLDLGSHKGYSDLALALEK 120
           PVCSYR+KNSF EKE   SLHEN+NSK+YVKISMDGAPFLRKLDLGSH GYSDLALALEK
Sbjct: 138 PVCSYRRKNSFEEKE---SLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSDLALALEK 197

Query: 121 LFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLRIMKRSEAKGFG 180
           LFACFGTGKT KHG+ SDYVPIYEDKDGDWMLVGDVPW+MF +SCKRLRIMKRSEAKGFG
Sbjct: 198 LFACFGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFG 257

Query: 181 LQFKDL 187
           LQFKDL
Sbjct: 258 LQFKDL 259

[Close]

BLAST of Spg013834 vs. TAIR 10
Match: AT3G15540.1 (indole-3-acetic acid inducible 19 )

HSP 1 Score: 209.1 bits (531), Expect = 3.0e-54
Identity = 114/201 (56.72%), Postives = 137/201 (68.16%), Query Frame = 0


Query: 1   MAKEALGLEITELRLGLPGN--SDKNEKKRVYAD-----------------IVAGGDEPT 60
           M KE LGLEITELRLGLPG   ++K  KKR + +                 + +GGD   
Sbjct: 1   MEKEGLGLEITELRLGLPGRDVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGDAEK 60

Query: 61  RDDVGRKNNASKGQVVGWPPVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLR 120
            +D    + A+K QVVGWPPVCSYRKKNS   KE+S++    +    YVK+SMDG P+LR
Sbjct: 61  VND----SPAAKSQVVGWPPVCSYRKKNSC--KEASTT----KVGLGYVKVSMDGVPYLR 120

Query: 121 KLDLGSHKGYSDLALALEKLFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMF 180
           K+DLGS +GY DLA AL+KLF   G G  LK G++ +YV IYEDKDGDWML GDVPW MF
Sbjct: 121 KMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAGDVPWGMF 180

Query: 181 IESCKRLRIMKRSEAKGFGLQ 183
           +ESCKRLRIMKRS+A GFGLQ
Sbjct: 181 LESCKRLRIMKRSDATGFGLQ 191

[Close]

BLAST of Spg013834 vs. TAIR 10
Match: AT1G52830.1 (indole-3-acetic acid 6 )

HSP 1 Score: 184.9 bits (468), Expect = 6.0e-47
Identity = 101/197 (51.27%), Postives = 126/197 (63.96%), Query Frame = 0


Query: 1   MAKEALGLEITELRLGLPGNS--------DKNEKKRVYADIVAGGDEPTRDD---VGRKN 60
           MAKE L LEITELRLGLPG++           +KKRV +D++      T ++   V    
Sbjct: 1   MAKEGLALEITELRLGLPGDNYSEISVCGSSKKKKRVLSDMMTSSALDTENENSVVSSVE 60

Query: 61  NAS----KGQVVGWPPVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLRKLDL 120
           + S    K Q VGWPPVCSYR+K +   +E+S ++        YVK+SMDG P++RK+DL
Sbjct: 61  DESLPVVKSQAVGWPPVCSYRRKKN--NEEASKAIG-------YVKVSMDGVPYMRKIDL 120

Query: 121 GSHKGYSDLALALEKLFACFGTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMFIESC 180
           GS   Y +L   LE LF C G G   K G+  +Y+ IYEDKD DWMLVGDVPW MF ESC
Sbjct: 121 GSSNSYINLVTVLENLFGCLGIG-VAKEGKKCEYIIIYEDKDRDWMLVGDVPWQMFKESC 180

Query: 181 KRLRIMKRSEAKGFGLQ 183
           KRLRI+KRS+A GFGLQ
Sbjct: 181 KRLRIVKRSDATGFGLQ 187

[Close]

BLAST of Spg013834 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 170.6 bits (431), Expect = 1.2e-42
Identity = 97/189 (51.32%), Postives = 122/189 (64.55%), Query Frame = 0


Query: 4   EALGLEITELRLGLPGNSDKNE-KKRVYA------DIVAGGDEPTRDDVGRKNNAS---K 63
           E + L+ TELRLGLPG  +  E K+RV         +++   E   +   RK   S   K
Sbjct: 3   EFVNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRK 62

Query: 64  GQVVGWPPVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLRKLDLGSHKGYSD 123
            Q+VGWPPV SYRK N   +K  S    E+E   +YVK+SMDGAP+LRK+DL  +KGYS+
Sbjct: 63  AQIVGWPPVRSYRKNNIQSKKNES----EHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSE 122

Query: 124 LALALEKLFACFGTGKTLKHG--ESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLRIM 181
           L  ALE +F  F  G+  +    + SD+VP YEDKDGDWML+GDVPW+MFI +CKRLRIM
Sbjct: 123 LLKALEVMFK-FSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIM 182

[Close]

BLAST of Spg013834 vs. TAIR 10
Match: AT1G15580.1 (indole-3-acetic acid inducible 5 )

HSP 1 Score: 165.6 bits (418), Expect = 3.7e-41
Identity = 100/189 (52.91%), Postives = 116/189 (61.38%), Query Frame = 0


Query: 1   MAKEA--LGLEITELRLGLPGNSDKNEKKRVYADIVAGGD--------EPTRDDVGRKNN 60
           MA E+  LGLEITELRLGLPG            DIV  G+         P  +   +   
Sbjct: 1   MANESNNLGLEITELRLGLPG------------DIVVSGESISGKKRASPEVEIDLKCEP 60

Query: 61  ASKGQVVGWPPVCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLRKLDLGSHKG 120
           A K QVVGWPPVCSYR+KNS    +SS           YVK+S+DGA FLRK+DL  +K 
Sbjct: 61  AKKSQVVGWPPVCSYRRKNSLERTKSS-----------YVKVSVDGAAFLRKIDLEMYKC 120

Query: 121 YSDLALALEKLFACF-GTGKTLKHGESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLR 179
           Y DLA AL+ LF C+     TLK    S+ VPIYEDKDGDWML GDVPW+MF+ SCKRLR
Sbjct: 121 YQDLASALQILFGCYINFDDTLK---ESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLR 163

[Close]

BLAST of Spg013834 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 165.6 bits (418), Expect = 3.7e-41
Identity = 89/181 (49.17%), Postives = 113/181 (62.43%), Query Frame = 0


Query: 4   EALGLEITELRLGLPGNSDKNEKKRVYADIVAGGDEPTRDDVGRKNNAS--KGQVVGWPP 63
           E + L+ TELRLGLPG  +     +    ++    E   +  G+   AS  K Q+VGWPP
Sbjct: 9   ELVNLKATELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPKAQIVGWPP 68

Query: 64  VCSYRKKNSFGEKESSSSLHENENSKMYVKISMDGAPFLRKLDLGSHKGYSDLALALEKL 123
           V SYRK N   +K       E+E    YVK+SMDGAP+LRK+DL  +K Y +L  +LE +
Sbjct: 69  VRSYRKNNVQTKKS------ESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENM 128

Query: 124 FACFGTGKTLKHG--ESSDYVPIYEDKDGDWMLVGDVPWDMFIESCKRLRIMKRSEAKGF 181
           F  F  G+  +    + SD+VP YEDKDGDWMLVGDVPW+MF+ SCKRLRIMK SE KG 
Sbjct: 129 FK-FSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL 182

The following BLAST results are available for this feature:

BLAST of Spg013834 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135828.1	3.5e-89	87.63	auxin-induced protein IAA6 [Cucumis sativus]	[more]
KAG7014105.1	7.7e-89	89.84	Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_038899110.1	1.7e-88	89.30	auxin-induced protein AUX22-like [Benincasa hispida]	[more]
XP_008461049.1	2.9e-88	88.66	PREDICTED: auxin-induced protein IAA6 isoform X1 [Cucumis melo]	[more]
KAG6575564.1	2.9e-88	89.30	Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Spg013834 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P13088	6.8e-64	65.80	Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1	[more]
P32293	1.9e-61	63.21	Auxin-induced protein 22A OS=Vigna radiata var. radiata OX=3916 GN=AUX22A PE=2 S...	[more]
P49680	7.8e-60	65.41	Auxin-induced protein IAA6 OS=Pisum sativum OX=3888 GN=IAA6 PE=2 SV=1	[more]
O24541	5.1e-59	61.98	Auxin-induced protein 22C OS=Vigna radiata var. radiata OX=3916 GN=AUX22C PE=2 S...	[more]
O24409	4.2e-53	56.72	Auxin-responsive protein IAA19 OS=Arabidopsis thaliana OX=3702 GN=IAA19 PE=1 SV=...	[more]

BLAST of Spg013834 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KC02	1.7e-89	87.63	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_7G440550 PE=3 SV=1	[more]
A0A1S3CF19	1.4e-88	88.66	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103499752 PE=3 SV=1	[more]
A0A6J1GPU1	3.2e-88	89.30	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111456436 PE=3 SV=1	[more]
A0A6J1JTD7	3.5e-87	88.24	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111488703 PE=3 SV=1	[more]
A0A6J1L0Q4	1.1e-85	86.02	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498041 PE=3 SV=1	[more]

BLAST of Spg013834 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15540.1	3.0e-54	56.72	indole-3-acetic acid inducible 19	[more]
AT1G52830.1	6.0e-47	51.27	indole-3-acetic acid 6	[more]
AT1G04240.1	1.2e-42	51.32	AUX/IAA transcriptional regulator family protein	[more]
AT1G15580.1	3.7e-41	52.91	indole-3-acetic acid inducible 5	[more]
AT5G43700.1	3.7e-41	49.17	AUX/IAA transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 47..179 e-value: 5.4E-53 score: 180.3
None	No IPR available	GENE3D	3.10.20.90		coord: 81..184 e-value: 2.7E-39 score: 135.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..53
None	No IPR available	PANTHER	PTHR31734:SF87	AUXIN-RESPONSIVE PROTEIN IAA6	coord: 4..179
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 77..172
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 4..179
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 87..175 score: 25.346584

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg013834.1	Spg013834.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding