Spg013798 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg013798
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPhotosystem II stability/assembly factor
Locationscaffold3: 45866016 .. 45871028 (+)
RNA-Seq ExpressionSpg013798
SyntenySpg013798
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGTTGAGAGAAATTCTCTCTGGATAATGTGAGAGATAAGAGGTCGACCAACGCTTCTCTGCTCCTTTCCTTTTCTCTTCAATGGCGACTCTGCAACAACTCCTCAAACCTTCATGGACCTCTCTCTTTGCTCCTTCCTCTCCTCGCCATTCCCTCACCTCCGTCTCTCAACCCCAAGTTCAGCCTCGAGGTGTTAATTCTACCACTCCCAAAGCCTCTCTTCAGAATTCTTCCATCAATCGCCGGCAGTTCGTTGCTGAGACAGCAGCCGCGGTTTCTCTGTCGCTTTCTCCGTTGATTGCTCCCGTGCATCCGGCGAAGTCCGAAGAAACTCTGTCGGAGTGGGAGAGGCTGTACCTCCCTATAGATCCTGGTGTTGTCCTTCTCGACATTGCTTTTGTGCCCGATGATTTGGACCATGGTTAGTTTCGATAGCTTTGAATTCTTTTGCTGCTTGGTCGTTGAGAAAGAAATGCTAAAGAATTTTGGAATTGTTGATGTTTTTCTGCTACGATTTTTTCGAGTCGCGATTAGTAAGTAATTGTTGGAAACATCTGAGGTTTGGGAGGATTTGTACACTGAACAGCTATTAGTCGTCTATTAAGACTTGAACTGTAGTTTAGTTAAGTTAAGCTGGTCTTGTTAAGATTTCGCATTTCTAATTATTTTTAAATCAGTTTCTTCATCGATAATTCTTTTTGGGGTTGGGAAGTTGGGGCTTTGGTGTCTAATTGAATTCGTGTAAAGCAAATTCTGATTATCATTTCTTCAAATAATTTTATGTACCTTATTGGTGCTTAAGAATTTTGTCAAGGCTCCTGACTAGTGTAATTTTTAATTTCTCGTTCCTACGGATATGGTTTCGAGTTCCTTCTACCAACATAATGCAATGAAATCATTTGACACTTTCAGTCCACTGCAGGATTCCTTTTGGGGACCAGGCAAACCATTTTAGAGACAAAAGATGGTGGAAGAACATGGGCTCCACGTTCAATACCCTCGGCTGAAGAAGAAGACTTTAACTACCGATTTAATGCTATTAGCTTCAAAGGGAAGGAGGGATGGATTGTTGGCAAACCTGCGATTCTGTTGTACACTTCGGATGCTGGAGAAAGCTGGGAAAGGATACCTCTTAGTGCTCAGCTTCCTGGAGATATGGTAAAACTTATATTTTGTGCCATCGATAAGGAATTCATATACGATAGTGTGCTTGAATTTTAGTTTGTTCTATTTTTAGTCTATCCTCGAATGCTTGGCTGAATTGTAAGTTATAGCTTTTTCTTTATCAATTGTAGTTATAATGCTCATTTAATATAGCTAAACAAGGTTAGACCACAAGAGCAATAACCTACTATTCACAGCTATAAATTAAGATGGAAATTTTGAGTTTTTTTTAACATATCTACAGCTATAAATTTATCTGTTTTTTTCTTCCAGAAAGTATATTTAACTCTAGAGTGGGTGGTTCTATTATAAAACCTTCAGGTCTACATTAAAGCAACTGGAGAAAAAAGTGCTGAGATGGTTACTGACGAAGGTGCCATATATGTTACATCAAACAAGGGATATAATTGGAAGGCTGCAGTTCAGGAGACTGTTTCTGCCACTCTCAATAGGTGTGCTTCAGCAGGAAAAGTTTTTCCATTCTATGAGTGTTTAAAATAAAAGACTCATTGTTTAGAATTTAACCTTGAAATTGTTGTGGAATAATTAATACACTGATTACTGATAAGATTTGACTGGTGGCTTGTGGCAGGAAATCATGGGCCACAATTCAATAGTTTAGCACATTAAAAGAAAAAAATCAAATTCAATCCCGATTATGAGATGCTAATGTGGTTTCTTTACCTTTTTCAGAACAGTTTCAAGTGGTATCAGTGGTGCAAGCTATTATACTGGAACCTTTAACACAGTTAATCGCTCTCCTGATGGCCGTTATGTAGCTGTTTCAAGTCGTGGTAACTTCTACCTCACCTGGGAGCCTGGGCAGGTTTAACTTCTGTATTTCTTTTACTCTCTCTCTTCTTCTTCTGACTATGTCGCTTTGATCTGGTTGTGAAAGCAGGTTGCTCCTCGGTTGAGAGCTGAGTTTCTTGTTGGGCTTAATTACCACATTTATAAGTTATTAAAACTTGGCTTTTTCTGCAATTCCAGCCATTCTGGCAGCCACATAACAGAGCTATTGCAAGGAGGATTCAAAACATGGGGTGGAGAGCTGATGGTGGTCTTTGGCTTCTTGTTCGTGGAGGAGGACTTTTTCTTAGTAAAGGGACAGGGGTAGGTGAAATTGAGGGCTGTTCCTTTGTGTTTCTAGTCAAGCTATCCAATGGAAAATATGAAAAATGGTTTAGATTTGCAATGTGGTTTGGTTTTAACCTTTAAAAAGAATCATTTCCCCCTTCTCCTACTAGTATAAGTTTTCATCATTAGACTTATAGCTGCATAATAACTCAATAGCGGAATCCTATAAACCCGTTGCTGTCTGGATATGCTATCATAAGAAACTTTAATATATACTTTTTTCTCTTAATCCAAAATCATTGAAAACGTTGTAATTGAACAAAACTAGTTTTTCATCGTCTTTAGACTAATCTTTCATCACATACTGTTGCTTCCAAGAATCTCAGCTAGAGCTTTCAGCCAACTCCTGTTAAGTATTAACTGCTTGTTGAATTCAATATGTTTAATATAACAGATAAGTGAGGAGTTTGAAGAAGTTCCAGTTCAAAGCCGAGGTTTTGGCATATTAGATGTTGGCTATCGTTCAAAGGCAAGTTTTTAAGATCATTTATAAATGCCTATACTTGTGCATCCTCATTCATTCTTGAAGACTCCCGCTGATATTGTGATTGAGATAGAAATATAATATTTGTTTGTTGCAAATACTTAAAATTGACCTTCTTGGAGGCTGTACTCAATGGCTCTCGTTGATTTGTGTGAATTTTATTTAATCTCAAAAGTCCTTTTCTTTTTATTTCCACGGCCTGGTCTGTTCAGTACCTAGTCAGACTTTTTTTGTTCCAATGAATTGTAGATAAAATTGTTTATTTGATTTGAAAACACAAAATGTTTTTGAAAAAAAAAAATCGACACAGAACCTCAATATGGTTATTTAGTTTTTCTATTAGACATGCTATGTGTTGAACTGAAACTAAACATACATGCACCGTGCAGCACTATTTAGTTATCAGTATTCTAGCACCAAAATAAATGTGTGTGAGAGAGACAGAGAGGGCACAAATGATTAGATGAATGAAAGAGTGGTAATTTGTCTTACTATTAGCAATTGATGTCTAGCAATGAATATATAGTCTGTGTGCTGAATTCCATATCCTTTTTAATTTATCATAAGCACCAGATAAAAATGAAGTCATCCCTTTTACCCAAAATTGATCATTGCCCAGGTAGATTTATTTATTTATTTTTTTGTTTCTGGTTTGAGGTGTACAGGAAGAGGCTTGGGCAGCTGGGGGAAGTGGAGTACTTCTGAAAACTACAAATGGTGGCAAGACATGGACCCGTGATAAAGCAGCTGACAATATTGCGGCCAACCTATACTCTGTAAAGTGAGTATGACCATACTGTAAACTTGAGTTAGTTTTACGATTTGAATCTGAAATTACCTCACATTCAAGGACACTTTGGCATACGCTTACTATAAAGACTATCTCTTTATGGCTCTCCCTCCGATGAATGAAGTGTAAAAAGAAAAATCAAAGCTCTCTACCCTGCTTCTTCCTTAGTGTTTAAAAGCATTTTTTTAAAATTTTTTATAGTGTTTAGTTAGAGGATTGAAAATGATTTTAAGAATTTTTTAAACATTACAAAACACTTGGATGTGCTGTAAAAGTACTTCTTTCAAAAGTATTTATAAAAGGAGTGCTTTCACTATTTTTTTTTCCAAAGTCATCCCAAATTTACCTTTTACCTAAAACTGATATCAGGCTTTGTTGCCAAAAAAAGCCTAACACTTCCAATCATAATCAATATGGCTGCAAACACAATCAATTGTGCTATAATTTTGCATAAAAAATTTAGGGCATCGAGTTTAGTAGTGAGTATGAGTTCTTTACTTTCAATTCACCTGCTTCACATATTTTCTCTTTTGATCTATTTACATCACCACAGGTTTATAAATGATAAGAAAGGTTTTGTGCTCGGAAATGACGGGGTGTTGCTTCAATATCTTGGTTGAAGTTTGAGAATTTACTCGGTAATTAATTCATATCACCCTTTTCCTTCTCTTTGAATTTTCTGTCATAGCCTCTCAGGCACTTGCTGTCGCTGTTTAATTTCTTCTGCTTGGAAAAAGAATATATATATATATATATATATGAAGCAGTGTAGAAATGTTAATTAAATTGTTTAGGATCTTTCTTCTATTTTTGAAAATTATGCTTATTTATATATATATATATTTTAATCTACGTTCAAACTTGCTTTTAAAATTATATCCAGAATTTAAAAGCTGAAAAAAGGCAACTTTTAAAAACATGTTTTTCTGATTCTGAAATTTTGTTAACTTAAAAATGTTTCAGAAAGGATTTTTTTTTAATAAGATTTATTTTAAAAAATAGAATACATAATAGTTATCAAATGAGCCTAAATTTTAAAGATTTATCTTTTTGACGTTTTTCTTGTTCAGGTTACAGAGTCAGATTCTATATGATGCTTGAGATGGAAATTTTGTATCGTTAAATCATAGCTTGCATTCTTGCTTTTGATGATGGGATGAGGTGTTAATGTTACCAAGTTTCATATCTTTCCATTTTTTTGCATTTCTGAAGGTCAAAAACTTTTAGCAATGCTTTCATTAGAAAGAATCGACATCGTAAATAGTTTTTGATTTTTGTTGATATCTGTAATCTATACTTGTTCAGATGCTCATTGTTGAATGCAAACAATGATGAATTTGGAAGTTATAGATGCATTTACGCCCTTTGCTTTTTTATTGAATTTTAGTGTATATTGAACTTATATTTGCATACTGAACAATGAGGCTTTAAAATGACT

mRNA sequence

ATGGCGACTCTGCAACAACTCCTCAAACCTTCATGGACCTCTCTCTTTGCTCCTTCCTCTCCTCGCCATTCCCTCACCTCCGTCTCTCAACCCCAAGTTCAGCCTCGAGGTGTTAATTCTACCACTCCCAAAGCCTCTCTTCAGAATTCTTCCATCAATCGCCGGCAGTTCGTTGCTGAGACAGCAGCCGCGGTTTCTCTGTCGCTTTCTCCGTTGATTGCTCCCGTGCATCCGGCGAAGTCCGAAGAAACTCTGTCGGAGTGGGAGAGGCTGTACCTCCCTATAGATCCTGGTGTTGTCCTTCTCGACATTGCTTTTGTGCCCGATGATTTGGACCATGGATTCCTTTTGGGGACCAGGCAAACCATTTTAGAGACAAAAGATGGTGGAAGAACATGGGCTCCACGTTCAATACCCTCGGCTGAAGAAGAAGACTTTAACTACCGATTTAATGCTATTAGCTTCAAAGGGAAGGAGGGATGGATTGTTGGCAAACCTGCGATTCTGTTGTACACTTCGGATGCTGGAGAAAGCTGGGAAAGGATACCTCTTAGTGCTCAGCTTCCTGGAGATATGGTCTACATTAAAGCAACTGGAGAAAAAAGTGCTGAGATGGTTACTGACGAAGGTGCCATATATGTTACATCAAACAAGGGATATAATTGGAAGGCTGCAGTTCAGGAGACTGTTTCTGCCACTCTCAATAGAACAGTTTCAAGTGGTATCAGTGGTGCAAGCTATTATACTGGAACCTTTAACACAGTTAATCGCTCTCCTGATGGCCGTTATGTAGCTGTTTCAAGTCGTGGTAACTTCTACCTCACCTGGGAGCCTGGGCAGCCACATAACAGAGCTATTGCAAGGAGGATTCAAAACATGGGGTGGAGAGCTGATGGTGGTCTTTGGCTTCTTGTTCGTGGAGGAGGACTTTTTCTTAGTAAAGGGACAGGGATAAGTGAGGAGTTTGAAGAAGTTCCAGTTCAAAGCCGAGGTTTTGGCATATTAGATGTTGGCTATCGTTCAAAGGCAAGTGTACAGGAAGAGGCTTGGGCAGCTGGGGGAAGTGGAGTACTTCTGAAAACTACAAATGGTGGCAAGACATGGACCCGTGATAAAGCAGCTGACAATATTGCGGCCAACCTATACTCTGTAAAGTTTATAAATGATAAGAAAGGTTTTGTGCTCGGAAATGACGGGGTGTTGCTTCAATATCTTGGTTGA

Coding sequence (CDS)

ATGGCGACTCTGCAACAACTCCTCAAACCTTCATGGACCTCTCTCTTTGCTCCTTCCTCTCCTCGCCATTCCCTCACCTCCGTCTCTCAACCCCAAGTTCAGCCTCGAGGTGTTAATTCTACCACTCCCAAAGCCTCTCTTCAGAATTCTTCCATCAATCGCCGGCAGTTCGTTGCTGAGACAGCAGCCGCGGTTTCTCTGTCGCTTTCTCCGTTGATTGCTCCCGTGCATCCGGCGAAGTCCGAAGAAACTCTGTCGGAGTGGGAGAGGCTGTACCTCCCTATAGATCCTGGTGTTGTCCTTCTCGACATTGCTTTTGTGCCCGATGATTTGGACCATGGATTCCTTTTGGGGACCAGGCAAACCATTTTAGAGACAAAAGATGGTGGAAGAACATGGGCTCCACGTTCAATACCCTCGGCTGAAGAAGAAGACTTTAACTACCGATTTAATGCTATTAGCTTCAAAGGGAAGGAGGGATGGATTGTTGGCAAACCTGCGATTCTGTTGTACACTTCGGATGCTGGAGAAAGCTGGGAAAGGATACCTCTTAGTGCTCAGCTTCCTGGAGATATGGTCTACATTAAAGCAACTGGAGAAAAAAGTGCTGAGATGGTTACTGACGAAGGTGCCATATATGTTACATCAAACAAGGGATATAATTGGAAGGCTGCAGTTCAGGAGACTGTTTCTGCCACTCTCAATAGAACAGTTTCAAGTGGTATCAGTGGTGCAAGCTATTATACTGGAACCTTTAACACAGTTAATCGCTCTCCTGATGGCCGTTATGTAGCTGTTTCAAGTCGTGGTAACTTCTACCTCACCTGGGAGCCTGGGCAGCCACATAACAGAGCTATTGCAAGGAGGATTCAAAACATGGGGTGGAGAGCTGATGGTGGTCTTTGGCTTCTTGTTCGTGGAGGAGGACTTTTTCTTAGTAAAGGGACAGGGATAAGTGAGGAGTTTGAAGAAGTTCCAGTTCAAAGCCGAGGTTTTGGCATATTAGATGTTGGCTATCGTTCAAAGGCAAGTGTACAGGAAGAGGCTTGGGCAGCTGGGGGAAGTGGAGTACTTCTGAAAACTACAAATGGTGGCAAGACATGGACCCGTGATAAAGCAGCTGACAATATTGCGGCCAACCTATACTCTGTAAAGTTTATAAATGATAAGAAAGGTTTTGTGCTCGGAAATGACGGGGTGTTGCTTCAATATCTTGGTTGA

Protein sequence

MATLQQLLKPSWTSLFAPSSPRHSLTSVSQPQVQPRGVNSTTPKASLQNSSINRRQFVAETAAAVSLSLSPLIAPVHPAKSEETLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKASVQEEAWAAGGSGVLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Homology
[Close]
BLAST of Spg013798 vs. NCBI nr
Match: XP_022959584.1 (photosystem II stability/assembly factor HCF136, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 756.9 bits (1953), Expect = 8.9e-215
Identity = 382/410 (93.17%), Postives = 393/410 (95.85%), Query Frame = 0 

Query: 1   MATLQQLLKPSWTSLFAPSSPRHSLTSVSQPQVQPRGVNSTTPKASLQNSSINRRQFVAE 60
           MAT+QQLL+PSW   FA SSPRHS TS+SQPQVQPR VNS TPKAS++NSSINRR+FVAE
Sbjct: 1   MATMQQLLRPSW---FASSSPRHSFTSLSQPQVQPRTVNSVTPKASIKNSSINRREFVAE 60

Query: 61  TAAAVSLSLSPLIAPVHPAKSEETLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTR 120
           TAAAVSLSLSPLIAPV PAKSEE LS+WERLYLPIDPGVVLLDIAFVPDDL+HGFLLGTR
Sbjct: 61  TAAAVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTR 120

Query: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDAGESWE 180
           QTILETKDGGRTWAPRSIPSAEEEDFNYRFN+ISF+GKEGWIVGKPAILLYTSDAGESWE
Sbjct: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWE 180

Query: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240
           RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS
Sbjct: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240

Query: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG----QPHNRAIARRIQNMGWR 300
           GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG    QPHNRAIARRIQNMGWR
Sbjct: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWR 300

Query: 301 ADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKASVQEEAWAAGGSG 360
           ADGGLWLLVRGGGLFLSKGTGISE+FEEVPVQSRGFGILDVGYRSK    EEAWAAGGSG
Sbjct: 301 ADGGLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSK----EEAWAAGGSG 360

Query: 361 VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 407
           VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 403

[Close]
BLAST of Spg013798 vs. NCBI nr
Match: KAG7025624.1 (Photosystem II stability/assembly factor, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 756.5 bits (1952), Expect = 1.2e-214
Identity = 382/410 (93.17%), Postives = 393/410 (95.85%), Query Frame = 0 

Query: 1   MATLQQLLKPSWTSLFAPSSPRHSLTSVSQPQVQPRGVNSTTPKASLQNSSINRRQFVAE 60
           MATLQQLL+PSW   FA SSPRHS TS+SQPQ+QPR VNS TPKAS++NSSINRR+FVAE
Sbjct: 1   MATLQQLLRPSW---FASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFVAE 60

Query: 61  TAAAVSLSLSPLIAPVHPAKSEETLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTR 120
           TAAAVSLSLSPLIAPV PAKSEE LS+WERLYLPIDPGVVLLDIAFVPDDL+HGFLLGTR
Sbjct: 61  TAAAVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTR 120

Query: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDAGESWE 180
           QTILETKDGGRTWAPRSIPSAEEEDFNYRFN+ISF+GKEGWIVGKPAILLYTSDAGESWE
Sbjct: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWE 180

Query: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240
           RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS
Sbjct: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240

Query: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG----QPHNRAIARRIQNMGWR 300
           GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG    QPHNRAIARRIQNMGWR
Sbjct: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWR 300

Query: 301 ADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKASVQEEAWAAGGSG 360
           ADGGLWLLVRGGGLFLSKGTGISE+FEEVPVQSRGFGILDVGYRSK    EEAWAAGGSG
Sbjct: 301 ADGGLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSK----EEAWAAGGSG 360

Query: 361 VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 407
           VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 403

[Close]
BLAST of Spg013798 vs. NCBI nr
Match: XP_023004561.1 (photosystem II stability/assembly factor HCF136, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 755.0 bits (1948), Expect = 3.4e-214
Identity = 381/410 (92.93%), Postives = 393/410 (95.85%), Query Frame = 0 

Query: 1   MATLQQLLKPSWTSLFAPSSPRHSLTSVSQPQVQPRGVNSTTPKASLQNSSINRRQFVAE 60
           MATLQQLL+PSW   FA SSPRHS TS+SQPQVQP+ VNS TPKAS++NSSINRR+FVAE
Sbjct: 1   MATLQQLLRPSW---FASSSPRHSFTSLSQPQVQPQTVNSVTPKASIKNSSINRREFVAE 60

Query: 61  TAAAVSLSLSPLIAPVHPAKSEETLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTR 120
           TAAAVSLSLSPLIAPV PAKSEE LS+WERLYLPIDPGVVLLDIAFVPDDL+HGFLLGTR
Sbjct: 61  TAAAVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTR 120

Query: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDAGESWE 180
           QTILETKDGGRTWAPRSIPSAEEEDFNYRFN+ISF+GKEGWIVGKPAILLYTSDAGESW+
Sbjct: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWD 180

Query: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240
           RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS
Sbjct: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240

Query: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG----QPHNRAIARRIQNMGWR 300
           GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG    QPHNRAIARRIQNMGWR
Sbjct: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWR 300

Query: 301 ADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKASVQEEAWAAGGSG 360
           ADGGLWLLVRGGGLFLSKGTGISE+FEEVPVQSRGFGILDVGYRSK    EEAWAAGGSG
Sbjct: 301 ADGGLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSK----EEAWAAGGSG 360

Query: 361 VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 407
           VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 403

[Close]
BLAST of Spg013798 vs. NCBI nr
Match: XP_023514720.1 (photosystem II stability/assembly factor HCF136, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 749.6 bits (1934), Expect = 1.4e-212
Identity = 380/410 (92.68%), Postives = 391/410 (95.37%), Query Frame = 0 

Query: 1   MATLQQLLKPSWTSLFAPSSPRHSLTSVSQPQVQPRGVNSTTPKASLQNSSINRRQFVAE 60
           MATLQQLL+P   S FA SSPRHS TS+SQPQ+QPR VNS TPKAS++NSSINRR+FVAE
Sbjct: 1   MATLQQLLRP---SCFASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFVAE 60

Query: 61  TAAAVSLSLSPLIAPVHPAKSEETLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTR 120
           TAAAVSLSLSPLIAPV PAKSEE LS+W RLYLPIDPGVVLLDIAFVPDDL+HGFLLGTR
Sbjct: 61  TAAAVSLSLSPLIAPVKPAKSEENLSQWARLYLPIDPGVVLLDIAFVPDDLNHGFLLGTR 120

Query: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDAGESWE 180
           QTILETKDGGRTWAPRSIPSAEEEDFNYRFN+ISF+GKEGWIVGKPAILLYTSDAGESWE
Sbjct: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWE 180

Query: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240
           RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS
Sbjct: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240

Query: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG----QPHNRAIARRIQNMGWR 300
           GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG    QPHNRAIARRIQNMGWR
Sbjct: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWR 300

Query: 301 ADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKASVQEEAWAAGGSG 360
           ADGGLWLLVRGGGLFLSKGTGISE+FEEVPVQSRGFGILDVGYRSK    EEAWAAGGSG
Sbjct: 301 ADGGLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSK----EEAWAAGGSG 360

Query: 361 VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 407
           VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 403

[Close]
BLAST of Spg013798 vs. NCBI nr
Match: KAA0058574.1 (photosystem II stability/assembly factor HCF136 [Cucumis melo var. makuwa] >TYK10374.1 photosystem II stability/assembly factor HCF136 [Cucumis melo var. makuwa])

HSP 1 Score: 745.0 bits (1922), Expect = 3.5e-211
Identity = 382/412 (92.72%), Postives = 392/412 (95.15%), Query Frame = 0 

Query: 1   MATL-QQLLKPSWT-SLFAPSSPRHSLTSVSQPQVQPRGVNSTTPKASLQNSSINRRQFV 60
           MATL QQLLKPSWT SLFA SSPRHSL   SQPQ+ PR ++ST+PKASL NSSINRRQFV
Sbjct: 1   MATLQQQLLKPSWTSSLFASSSPRHSL---SQPQLLPRTISSTSPKASLHNSSINRRQFV 60

Query: 61  AETAAAVSLSLSPLIAPVHPAKSEETLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLG 120
           A+TAAAVSLSLSP IAPV PAKSEE+LSEWERLYLPIDPGVVLLDIAFVPDDL+HGFLLG
Sbjct: 61  ADTAAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLNHGFLLG 120

Query: 121 TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDAGES 180
           TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFN+ISFKGKEGWIVGKPAILLYTSDAGES
Sbjct: 121 TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGES 180

Query: 181 WERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV 240
           WERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV
Sbjct: 181 WERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV 240

Query: 241 SSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG----QPHNRAIARRIQNMG 300
           SSGISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPG    QPHNRAIARRIQNMG
Sbjct: 241 SSGISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMG 300

Query: 301 WRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKASVQEEAWAAGG 360
           WRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSK    EEAWAAGG
Sbjct: 301 WRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSK----EEAWAAGG 360

Query: 361 SGVLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 407
           SGVLLKTTNGG++WTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 SGVLLKTTNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 405

[Close]
BLAST of Spg013798 vs. ExPASy Swiss-Prot
Match: O82660 (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCF136 PE=1 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 1.8e-173
Identity = 310/415 (74.70%), Postives = 354/415 (85.30%), Query Frame = 0 

Query: 1   MATLQ-----QLLKPSWTSLFAPSSPRHSLTSVSQPQVQPRGVNSTTPKASLQNSSINRR 60
           MA+LQ      L KPS +  F      H L   +     P    S +P +S  + S +RR
Sbjct: 1   MASLQLCDGYLLFKPSVSPRFLSQRISHRLIPKASSSPPP----SPSPSSSSSSLSFSRR 60

Query: 61  QFVAETAAAVSLSLSPLIAPVHPAKSEETLSEWERLYLPIDPGVVLLDIAFVPDDLDHGF 120
           + + + +AAVSLSLS ++    PA+++E LSEWER++LPIDPGVVLLDIAFVPD+   GF
Sbjct: 61  ELLYQ-SAAVSLSLSSIVG---PARADEQLSEWERVFLPIDPGVVLLDIAFVPDEPSRGF 120

Query: 121 LLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDA 180
           LLGTRQT+LETKDGG TW PRSIPSAEEEDFNYRFN+ISFKGKEGWI+GKPAILLYT+DA
Sbjct: 121 LLGTRQTLLETKDGGSTWNPRSIPSAEEEDFNYRFNSISFKGKEGWIIGKPAILLYTADA 180

Query: 181 GESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLN 240
           GE+W+RIPLS+QLPGDMV+IKAT +KSAEMVTDEGAIYVTSN+GYNWKAA+QETVSATLN
Sbjct: 181 GENWDRIPLSSQLPGDMVFIKATEDKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLN 240

Query: 241 RTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG----QPHNRAIARRIQ 300
           RTVSSGISGASYYTGTF+ VNRSPDGRYVAVSSRGNF+LTWEPG    QPHNRA+ARRIQ
Sbjct: 241 RTVSSGISGASYYTGTFSAVNRSPDGRYVAVSSRGNFFLTWEPGQPYWQPHNRAVARRIQ 300

Query: 301 NMGWRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKASVQEEAWA 360
           NMGWRADGGLWLLVRGGGL+LSKGTGI+EEFEEVPVQSRGFGILDVGYRS    +EEAWA
Sbjct: 301 NMGWRADGGLWLLVRGGGLYLSKGTGITEEFEEVPVQSRGFGILDVGYRS----EEEAWA 360

Query: 361 AGGSGVLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 407
           AGGSG+LL+T NGGK+W RDKAADNIAANLY+VKF++DKKGFVLGNDGVLL+Y+G
Sbjct: 361 AGGSGILLRTRNGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 403

[Close]
BLAST of Spg013798 vs. ExPASy Swiss-Prot
Match: Q5Z5A8 (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=HCF136 PE=3 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 1.5e-169
Identity = 302/394 (76.65%), Postives = 333/394 (84.52%), Query Frame = 0 

Query: 43  PKASLQNSSINRRQFVAETA-AAVSLSLSPLIAPVHP---AKSEETLSEWERLYLPIDPG 102
           P+A   + S  RR+F+A+TA A+ + ++ PL+ P  P   A    +LSEWER+ LPIDPG
Sbjct: 27  PRAHTDSISTGRRRFIADTATASAAAAVGPLVLPRTPLARADQPPSLSEWERVLLPIDPG 86

Query: 103 VVLLDIAFVPDDLDHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGK 162
           VVLLDIAFVPDD  HGFLLGTRQTILETK+GG TW PRSIPSAE+EDFNYRFN++SF GK
Sbjct: 87  VVLLDIAFVPDDPSHGFLLGTRQTILETKNGGNTWFPRSIPSAEDEDFNYRFNSVSFMGK 146

Query: 163 EGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNK 222
           EGWI+GKPAILL+TSDAG+SWERIPLSAQLPG+MVYIKATGE+SAEMVTDEGAIYVTSN+
Sbjct: 147 EGWIIGKPAILLHTSDAGDSWERIPLSAQLPGNMVYIKATGEQSAEMVTDEGAIYVTSNR 206

Query: 223 GYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEP 282
           GYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEP
Sbjct: 207 GYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEP 266

Query: 283 G----QPHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTG----------------- 342
           G    QPHNRA+ARRIQNMGWRADGGLWLLVRGGGLFLSKG+G                 
Sbjct: 267 GQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLSKGSGFQFFYRGLNDAHAISYL 326

Query: 343 -----ISEEFEEVPVQSRGFGILDVGYRSKASVQEEAWAAGGSGVLLKTTNGGKTWTRDK 402
                I+E+FEE  VQSRGFGILDVGYRSK    +EAWAAGGSGVLLKTTNGGKTW RDK
Sbjct: 327 HPPNQITEDFEEASVQSRGFGILDVGYRSK----DEAWAAGGSGVLLKTTNGGKTWVRDK 386

Query: 403 AADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 407
           AADNIAANLYSVKF+ D KG+VLGNDGVLL+Y+G
Sbjct: 387 AADNIAANLYSVKFLGDNKGYVLGNDGVLLRYVG 416

[Close]
BLAST of Spg013798 vs. ExPASy Swiss-Prot
Match: Q9AW48 (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Guillardia theta OX=55529 GN=hcf136 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.9e-90
Identity = 165/366 (45.08%), Postives = 242/366 (66.12%), Query Frame = 0 

Query: 52  INRRQFVAETAAAVSLSLSPLIAPVHPAKSEETLSEWERLYLPIDPGVVLLDIAFVPDDL 111
           INR +F       ++  L P +  ++P  +    + W ++ LP+D   VL DI F   + 
Sbjct: 42  INRTKF-------INYLLYPTLTSLYPKFTHANTTSWTKVDLPVDS--VLFDIEFTDPEC 101

Query: 112 DHGFLLGTRQTILETKDGGRTWAPRSIPSAE-EEDFNYRFNAISFKGKEGWIVGKPAILL 171
            HG+L+G++ T LET DGG TW PR+  + + +E+  YRF  ISF+G+EGW++GKPAI+L
Sbjct: 102 KHGWLVGSKGTFLETDDGGNTWVPRTFANLDPDEELTYRFENISFEGQEGWVIGKPAIIL 161

Query: 172 YTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETV 231
           YT D G++W R+P+S +LPG+   IKA G +SAE+ T  GAIYVT+N G NWKA V+ET+
Sbjct: 162 YTKDGGKTWFRVPVSPKLPGEPCLIKALGSESAELTTTSGAIYVTNNAGRNWKAQVKETI 221

Query: 232 SATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQ----PHNRAI 291
            +TLNRT+SSG+SGASY+TG    V R+ +G+Y+A+SSRGNFYLTWEPGQ    P  R  
Sbjct: 222 DSTLNRTISSGVSGASYFTGNVINVIRNSEGKYLAISSRGNFYLTWEPGQDFWIPRARET 281

Query: 292 ARRIQNMGWRADG---GLWLLVRGGGLFLSKGT----GISE-EFEEVPVQSRGFGILDVG 351
           +RRIQ+MG+  +    G+W+  RGGGL +S        IS   FE + +++ G+GILD  
Sbjct: 282 SRRIQSMGFIQNDNQKGIWMSTRGGGLSVSTKNFDFESISSFNFENIDIKTGGYGILDAA 341

Query: 352 YRSKASVQEEAWAAGGSGVLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGND 405
           + +     ++ W   G G++  +T+ GK WT+    D ++ NLY +KF+N+ KGF+LG++
Sbjct: 342 FVN----DKDIWIICGGGIVYNSTDKGKNWTKVDGIDKLSGNLYKIKFVNNNKGFILGSN 394

[Close]
BLAST of Spg013798 vs. ExPASy Swiss-Prot
Match: P73069 (Ycf48-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr2034 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.5e-76
Identity = 154/322 (47.83%), Postives = 201/322 (62.42%), Query Frame = 0 

Query: 88  WERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFN 147
           W+ + L  D      DIAF  +D +HG+L+GT++TI ET DGG TW  + I   EE+   
Sbjct: 40  WQEIALETDS--TFADIAFT-EDPNHGWLVGTKETIFETTDGGDTWEQKLIDLGEEK--- 99

Query: 148 YRFNAISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVT 207
             F+A+SF G EGWI GKP+ILL+T+D G++W RIPLS +LPG    I A G ++AEM+T
Sbjct: 100 ASFSAVSFSGNEGWITGKPSILLHTTDGGQTWARIPLSEKLPGAPYSIIALGPQTAEMIT 159

Query: 208 DEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVS 267
           D GAIY T+N G NWKA V+  V                   G   T+ RS DGRYVAVS
Sbjct: 160 DLGAIYKTTNGGKNWKALVEGAV-------------------GVARTIQRSTDGRYVAVS 219

Query: 268 SRGNFYLTWEPGQ----PHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEEFE 327
           +RGNFY TW PGQ    PHNR  +RR+Q MG+  DG LWLL RGG L  S      E  +
Sbjct: 220 ARGNFYSTWAPGQTEWTPHNRNSSRRLQTMGYGKDGQLWLLARGGQLQFSTDPDAEEWSD 279

Query: 328 EVPVQSRG-FGILDVGYRSKASVQEEAWAAGGSGVLLKTTNGGKTWTRDKAADNIAANLY 387
            +  Q +G +G+LD+ +R+     EE W AG SG LL + +GG+TW +D   ++I ANLY
Sbjct: 280 VIAPQDKGSWGLLDLSFRT----PEEVWVAGASGNLLMSQDGGQTWAKDTGVEDIPANLY 332

Query: 388 SVKFINDKKGFVLGNDGVLLQY 405
            V F++ +KGFVLG DG+LL+Y
Sbjct: 340 RVVFLSPEKGFVLGQDGILLKY 332

[Close]
BLAST of Spg013798 vs. ExPASy Swiss-Prot
Match: P48325 (Photosystem II stability/assembly factor HCF136 OS=Cyanophora paradoxa OX=2762 GN=hcf136 PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 2.5e-74
Identity = 148/328 (45.12%), Postives = 194/328 (59.15%), Query Frame = 0 

Query: 87  EWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDF 146
           +WE+  +P++   +LLDI FVPD    G+LLGTR T+ ET D G+TW  RS+     ED 
Sbjct: 32  KWEQ--IPLNTDEILLDIGFVPDQPQRGWLLGTRSTLFETTDKGKTWELRSL---NLEDD 91

Query: 147 NYRFNAISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMV 206
            YR N+ISF GKEGW+ GKPAILL+T+D G SW RIPLS QLPGD   I A G   AE+ 
Sbjct: 92  KYRLNSISFSGKEGWVTGKPAILLHTTDGGSSWSRIPLSNQLPGDPALITALGTGKAELA 151

Query: 207 TDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAV 266
           TD GAIY T N G  WKA +QE +                   G   TV RS +G YVAV
Sbjct: 152 TDIGAIYRTENSGQTWKAQIQEPL-------------------GVIRTVARSENGSYVAV 211

Query: 267 SSRGNFYLTWEPGQ----PHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEEF 326
           S++GNFY TW+ G      H R  +RRIQ+MG+  +  LW+L RGG L+ S      E  
Sbjct: 212 SAKGNFYSTWKEGDDKWISHPRQSSRRIQSMGFTNNNRLWMLTRGGQLWFSSNDSFDEPN 271

Query: 327 EEVPVQSR-----GFGILDVGYRSKASVQEEAWAAGGSGVLLKTTNGGKTWTRDKAADNI 386
            E P         G G+L++ +++      E W +GGSG+LL + + G TW ++ + DNI
Sbjct: 272 WEGPKTPEGKVGFGLGLLNLAFKTPT----EIWVSGGSGILLSSQDTGNTWKKETSTDNI 331

Query: 387 AANLYSVKFINDKKGFVLGNDGVLLQYL 406
            +N Y + FI+ + GFVLGN G LL+Y+
Sbjct: 332 PSNFYKISFIDKEVGFVLGNQGTLLRYV 331

[Close]
BLAST of Spg013798 vs. ExPASy TrEMBL
Match: A0A6J1H8H0 (Photosystem II stability/assembly factor OS=Cucurbita moschata OX=3662 GN=LOC111460613 PE=3 SV=1)

HSP 1 Score: 756.9 bits (1953), Expect = 4.3e-215
Identity = 382/410 (93.17%), Postives = 393/410 (95.85%), Query Frame = 0 

Query: 1   MATLQQLLKPSWTSLFAPSSPRHSLTSVSQPQVQPRGVNSTTPKASLQNSSINRRQFVAE 60
           MAT+QQLL+PSW   FA SSPRHS TS+SQPQVQPR VNS TPKAS++NSSINRR+FVAE
Sbjct: 1   MATMQQLLRPSW---FASSSPRHSFTSLSQPQVQPRTVNSVTPKASIKNSSINRREFVAE 60

Query: 61  TAAAVSLSLSPLIAPVHPAKSEETLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTR 120
           TAAAVSLSLSPLIAPV PAKSEE LS+WERLYLPIDPGVVLLDIAFVPDDL+HGFLLGTR
Sbjct: 61  TAAAVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTR 120

Query: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDAGESWE 180
           QTILETKDGGRTWAPRSIPSAEEEDFNYRFN+ISF+GKEGWIVGKPAILLYTSDAGESWE
Sbjct: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWE 180

Query: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240
           RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS
Sbjct: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240

Query: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG----QPHNRAIARRIQNMGWR 300
           GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG    QPHNRAIARRIQNMGWR
Sbjct: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWR 300

Query: 301 ADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKASVQEEAWAAGGSG 360
           ADGGLWLLVRGGGLFLSKGTGISE+FEEVPVQSRGFGILDVGYRSK    EEAWAAGGSG
Sbjct: 301 ADGGLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSK----EEAWAAGGSG 360

Query: 361 VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 407
           VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 403

[Close]
BLAST of Spg013798 vs. ExPASy TrEMBL
Match: A0A6J1KSF8 (Photosystem II stability/assembly factor OS=Cucurbita maxima OX=3661 GN=LOC111497826 PE=3 SV=1)

HSP 1 Score: 755.0 bits (1948), Expect = 1.6e-214
Identity = 381/410 (92.93%), Postives = 393/410 (95.85%), Query Frame = 0 

Query: 1   MATLQQLLKPSWTSLFAPSSPRHSLTSVSQPQVQPRGVNSTTPKASLQNSSINRRQFVAE 60
           MATLQQLL+PSW   FA SSPRHS TS+SQPQVQP+ VNS TPKAS++NSSINRR+FVAE
Sbjct: 1   MATLQQLLRPSW---FASSSPRHSFTSLSQPQVQPQTVNSVTPKASIKNSSINRREFVAE 60

Query: 61  TAAAVSLSLSPLIAPVHPAKSEETLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTR 120
           TAAAVSLSLSPLIAPV PAKSEE LS+WERLYLPIDPGVVLLDIAFVPDDL+HGFLLGTR
Sbjct: 61  TAAAVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTR 120

Query: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDAGESWE 180
           QTILETKDGGRTWAPRSIPSAEEEDFNYRFN+ISF+GKEGWIVGKPAILLYTSDAGESW+
Sbjct: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGESWD 180

Query: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240
           RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS
Sbjct: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240

Query: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG----QPHNRAIARRIQNMGWR 300
           GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG    QPHNRAIARRIQNMGWR
Sbjct: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWR 300

Query: 301 ADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKASVQEEAWAAGGSG 360
           ADGGLWLLVRGGGLFLSKGTGISE+FEEVPVQSRGFGILDVGYRSK    EEAWAAGGSG
Sbjct: 301 ADGGLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSK----EEAWAAGGSG 360

Query: 361 VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 407
           VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 403

[Close]
BLAST of Spg013798 vs. ExPASy TrEMBL
Match: A0A5D3CGP8 (Photosystem II stability/assembly factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00160 PE=3 SV=1)

HSP 1 Score: 745.0 bits (1922), Expect = 1.7e-211
Identity = 382/412 (92.72%), Postives = 392/412 (95.15%), Query Frame = 0 

Query: 1   MATL-QQLLKPSWT-SLFAPSSPRHSLTSVSQPQVQPRGVNSTTPKASLQNSSINRRQFV 60
           MATL QQLLKPSWT SLFA SSPRHSL   SQPQ+ PR ++ST+PKASL NSSINRRQFV
Sbjct: 1   MATLQQQLLKPSWTSSLFASSSPRHSL---SQPQLLPRTISSTSPKASLHNSSINRRQFV 60

Query: 61  AETAAAVSLSLSPLIAPVHPAKSEETLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLG 120
           A+TAAAVSLSLSP IAPV PAKSEE+LSEWERLYLPIDPGVVLLDIAFVPDDL+HGFLLG
Sbjct: 61  ADTAAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLNHGFLLG 120

Query: 121 TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDAGES 180
           TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFN+ISFKGKEGWIVGKPAILLYTSDAGES
Sbjct: 121 TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGES 180

Query: 181 WERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV 240
           WERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV
Sbjct: 181 WERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV 240

Query: 241 SSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG----QPHNRAIARRIQNMG 300
           SSGISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPG    QPHNRAIARRIQNMG
Sbjct: 241 SSGISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMG 300

Query: 301 WRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKASVQEEAWAAGG 360
           WRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSK    EEAWAAGG
Sbjct: 301 WRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSK----EEAWAAGG 360

Query: 361 SGVLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 407
           SGVLLKTTNGG++WTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 SGVLLKTTNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 405

[Close]
BLAST of Spg013798 vs. ExPASy TrEMBL
Match: A0A1S3CFV0 (Photosystem II stability/assembly factor OS=Cucumis melo OX=3656 GN=LOC103499970 PE=3 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 4.9e-211
Identity = 381/412 (92.48%), Postives = 392/412 (95.15%), Query Frame = 0 

Query: 1   MATL-QQLLKPSWT-SLFAPSSPRHSLTSVSQPQVQPRGVNSTTPKASLQNSSINRRQFV 60
           MATL QQLLKPSWT SLFA SSPRHSL   SQPQ+ PR ++ST+PKASL NSSINRRQFV
Sbjct: 1   MATLQQQLLKPSWTSSLFASSSPRHSL---SQPQLLPRTISSTSPKASLHNSSINRRQFV 60

Query: 61  AETAAAVSLSLSPLIAPVHPAKSEETLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLG 120
           A+TAAAVSLSLSP IAPV PAKSEE+LSEWERLYLPIDPGVVLLDIAFVPDDL+HGFLLG
Sbjct: 61  ADTAAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLNHGFLLG 120

Query: 121 TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDAGES 180
           TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFN+ISFKGKEGWIVGKPAILLYTSDAGES
Sbjct: 121 TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGES 180

Query: 181 WERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV 240
           WERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV
Sbjct: 181 WERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV 240

Query: 241 SSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG----QPHNRAIARRIQNMG 300
           SSGISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPG    QPHNRAIARRIQNMG
Sbjct: 241 SSGISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMG 300

Query: 301 WRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKASVQEEAWAAGG 360
           WRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSK    EEAWAAGG
Sbjct: 301 WRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSK----EEAWAAGG 360

Query: 361 SGVLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 407
           SGVLLKTTNGG++WTRDKAADNIAANLYSVKFIN+KKGFVLGNDGVLLQYLG
Sbjct: 361 SGVLLKTTNGGRSWTRDKAADNIAANLYSVKFINEKKGFVLGNDGVLLQYLG 405

[Close]
BLAST of Spg013798 vs. ExPASy TrEMBL
Match: A0A6J1DGV7 (Photosystem II stability/assembly factor OS=Momordica charantia OX=3673 GN=LOC111020948 PE=3 SV=1)

HSP 1 Score: 741.1 bits (1912), Expect = 2.4e-210
Identity = 376/410 (91.71%), Postives = 386/410 (94.15%), Query Frame = 0 

Query: 1   MATLQQLLKPSWTSLFAPSSPRHSLTSVSQPQVQPRGVNSTTPKASLQNSSINRRQFVAE 60
           MA+LQQLLKPSWTSLFAPS       S  QPQ QPR   ++TP+ASLQNSSINRRQFVAE
Sbjct: 1   MASLQQLLKPSWTSLFAPS------LSQPQPQPQPRTFTTSTPRASLQNSSINRRQFVAE 60

Query: 61  TAAAVSLSLSPLIAPVHPAKSEETLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTR 120
           TAAAVSLSLSPLIAPV PAKSEE LSEWERL+LPIDPGVVLLDIAFVPDDLDHGFLLGTR
Sbjct: 61  TAAAVSLSLSPLIAPVQPAKSEEALSEWERLFLPIDPGVVLLDIAFVPDDLDHGFLLGTR 120

Query: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDAGESWE 180
           QTILETKDGGRTWAPR+IPSAEEEDFNYRFN+ISFKGKEGWIVGKPAILLYTSDAGESWE
Sbjct: 121 QTILETKDGGRTWAPRTIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWE 180

Query: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240
           RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS
Sbjct: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240

Query: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG----QPHNRAIARRIQNMGWR 300
           GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG    QPHNRAIARRIQNMGWR
Sbjct: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWR 300

Query: 301 ADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKASVQEEAWAAGGSG 360
           ADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRS     EEAWAAGGSG
Sbjct: 301 ADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRS----TEEAWAAGGSG 360

Query: 361 VLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 407
           +LLKTTNGG+TW+RDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 ILLKTTNGGRTWSRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 400

[Close]
BLAST of Spg013798 vs. TAIR 10
Match: AT5G23120.1 (photosystem II stability/assembly factor, chloroplast (HCF136) )

HSP 1 Score: 610.1 bits (1572), Expect = 1.3e-174
Identity = 310/415 (74.70%), Postives = 354/415 (85.30%), Query Frame = 0 

Query: 1   MATLQ-----QLLKPSWTSLFAPSSPRHSLTSVSQPQVQPRGVNSTTPKASLQNSSINRR 60
           MA+LQ      L KPS +  F      H L   +     P    S +P +S  + S +RR
Sbjct: 1   MASLQLCDGYLLFKPSVSPRFLSQRISHRLIPKASSSPPP----SPSPSSSSSSLSFSRR 60

Query: 61  QFVAETAAAVSLSLSPLIAPVHPAKSEETLSEWERLYLPIDPGVVLLDIAFVPDDLDHGF 120
           + + + +AAVSLSLS ++    PA+++E LSEWER++LPIDPGVVLLDIAFVPD+   GF
Sbjct: 61  ELLYQ-SAAVSLSLSSIVG---PARADEQLSEWERVFLPIDPGVVLLDIAFVPDEPSRGF 120

Query: 121 LLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDA 180
           LLGTRQT+LETKDGG TW PRSIPSAEEEDFNYRFN+ISFKGKEGWI+GKPAILLYT+DA
Sbjct: 121 LLGTRQTLLETKDGGSTWNPRSIPSAEEEDFNYRFNSISFKGKEGWIIGKPAILLYTADA 180

Query: 181 GESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLN 240
           GE+W+RIPLS+QLPGDMV+IKAT +KSAEMVTDEGAIYVTSN+GYNWKAA+QETVSATLN
Sbjct: 181 GENWDRIPLSSQLPGDMVFIKATEDKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLN 240

Query: 241 RTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG----QPHNRAIARRIQ 300
           RTVSSGISGASYYTGTF+ VNRSPDGRYVAVSSRGNF+LTWEPG    QPHNRA+ARRIQ
Sbjct: 241 RTVSSGISGASYYTGTFSAVNRSPDGRYVAVSSRGNFFLTWEPGQPYWQPHNRAVARRIQ 300

Query: 301 NMGWRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKASVQEEAWA 360
           NMGWRADGGLWLLVRGGGL+LSKGTGI+EEFEEVPVQSRGFGILDVGYRS    +EEAWA
Sbjct: 301 NMGWRADGGLWLLVRGGGLYLSKGTGITEEFEEVPVQSRGFGILDVGYRS----EEEAWA 360

Query: 361 AGGSGVLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 407
           AGGSG+LL+T NGGK+W RDKAADNIAANLY+VKF++DKKGFVLGNDGVLL+Y+G
Sbjct: 361 AGGSGILLRTRNGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 403

The following BLAST results are available for this feature:
BLAST of Spg013798 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022959584.18.9e-21593.17photosystem II stability/assembly factor HCF136, chloroplastic-like [Cucurbita m... [more]
KAG7025624.11.2e-21493.17Photosystem II stability/assembly factor, chloroplastic [Cucurbita argyrosperma ... [more]
XP_023004561.13.4e-21492.93photosystem II stability/assembly factor HCF136, chloroplastic-like [Cucurbita m... [more]
XP_023514720.11.4e-21292.68photosystem II stability/assembly factor HCF136, chloroplastic-like [Cucurbita p... [more]
KAA0058574.13.5e-21192.72photosystem II stability/assembly factor HCF136 [Cucumis melo var. makuwa] >TYK1... [more]
BLAST of Spg013798 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O826601.8e-17374.70Photosystem II stability/assembly factor HCF136, chloroplastic OS=Arabidopsis th... [more]
Q5Z5A81.5e-16976.65Photosystem II stability/assembly factor HCF136, chloroplastic OS=Oryza sativa s... [more]
Q9AW481.9e-9045.08Photosystem II stability/assembly factor HCF136, chloroplastic OS=Guillardia the... [more]
P730691.5e-7647.83Ycf48-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN... [more]
P483252.5e-7445.12Photosystem II stability/assembly factor HCF136 OS=Cyanophora paradoxa OX=2762 G... [more]
BLAST of Spg013798 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H8H04.3e-21593.17Photosystem II stability/assembly factor OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1KSF81.6e-21492.93Photosystem II stability/assembly factor OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
A0A5D3CGP81.7e-21192.72Photosystem II stability/assembly factor OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3CFV04.9e-21192.48Photosystem II stability/assembly factor OS=Cucumis melo OX=3656 GN=LOC103499970... [more]
A0A6J1DGV72.4e-21091.71Photosystem II stability/assembly factor OS=Momordica charantia OX=3673 GN=LOC11... [more]
BLAST of Spg013798 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G23120.11.3e-17474.70photosystem II stability/assembly factor, chloroplast (HCF136) [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028203Photosynthesis system II assembly factor Ycf48/Hcf136-like domainPFAMPF14870PSII_BNRcoord: 83..404
e-value: 6.8E-117
score: 390.1
IPR016705Photosynthesis system II assembly factor Ycf48/Hcf136PIRSFPIRSF017875Photosystem_II_Ycf48-likecoord: 48..406
e-value: 1.8E-139
score: 462.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 73..261
e-value: 1.5E-8
score: 35.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..49
NoneNo IPR availablePANTHERPTHR47199PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTICcoord: 46..406
NoneNo IPR availableSUPERFAMILY110296Oligoxyloglucan reducing end-specific cellobiohydrolasecoord: 88..405

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg013798.1Spg013798.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009507 chloroplast
molecular_function GO:0005515 protein binding