Spg013768 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg013768
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold3: 46742601 .. 46743083 (-)
RNA-Seq ExpressionSpg013768
SyntenySpg013768
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAATGGCCATTCCATTTGTGAGACAATGGGGAGTGAAAGCATATCTTATAAACGCCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGCTTCAAAACCTCGCACCAAACGATGTCGATGATCTTAACGTTGGTGACGGAGATCAACTCGAGAGTCCTGCAACAAAAGAGTTCGAGAACAACGACCACAAAAGCTTAAAACAACTCATCAATGGCGAAGGGAAAGCGGAGACGAAGTCGGGAGCCGACGAGGGCGGTCGAGGAAGGAACTCGCTCGGGCAACACTTTAGTGAAGAAGAGATGAACAATAATAATCTTCAAATTGTGAAGAAACAACATCATGATGGACTACAAGGAGTGAAGCTGAAAAAAGTGATTGGAAAATTTTTGAGAAATTTGATCAAAGGTGGGGATCAACACCAGCTGAAGAAGCCAAGAAAAAAGGCTTTTCTCTAA

mRNA sequence

ATGGCCAATGGCCATTCCATTTGTGAGACAATGGGGAGTGAAAGCATATCTTATAAACGCCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGCTTCAAAACCTCGCACCAAACGATGTCGATGATCTTAACGTTGGTGACGGAGATCAACTCGAGAGTCCTGCAACAAAAGAGTTCGAGAACAACGACCACAAAAGCTTAAAACAACTCATCAATGGCGAAGGGAAAGCGGAGACGAAGTCGGGAGCCGACGAGGGCGGTCGAGGAAGGAACTCGCTCGGGCAACACTTTAGTGAAGAAGAGATGAACAATAATAATCTTCAAATTGTGAAGAAACAACATCATGATGGACTACAAGGAGTGAAGCTGAAAAAAGTGATTGGAAAATTTTTGAGAAATTTGATCAAAGGTGGGGATCAACACCAGCTGAAGAAGCCAAGAAAAAAGGCTTTTCTCTAA

Coding sequence (CDS)

ATGGCCAATGGCCATTCCATTTGTGAGACAATGGGGAGTGAAAGCATATCTTATAAACGCCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGCTTCAAAACCTCGCACCAAACGATGTCGATGATCTTAACGTTGGTGACGGAGATCAACTCGAGAGTCCTGCAACAAAAGAGTTCGAGAACAACGACCACAAAAGCTTAAAACAACTCATCAATGGCGAAGGGAAAGCGGAGACGAAGTCGGGAGCCGACGAGGGCGGTCGAGGAAGGAACTCGCTCGGGCAACACTTTAGTGAAGAAGAGATGAACAATAATAATCTTCAAATTGTGAAGAAACAACATCATGATGGACTACAAGGAGTGAAGCTGAAAAAAGTGATTGGAAAATTTTTGAGAAATTTGATCAAAGGTGGGGATCAACACCAGCTGAAGAAGCCAAGAAAAAAGGCTTTTCTCTAA

Protein sequence

MANGHSICETMGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLESPATKEFENNDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKKQHHDGLQGVKLKKVIGKFLRNLIKGGDQHQLKKPRKKAFL
Homology
BLAST of Spg013768 vs. NCBI nr
Match: XP_023004344.1 (uncharacterized protein LOC111497689 [Cucurbita maxima])

HSP 1 Score: 227.6 bits (579), Expect = 7.4e-56
Identity = 123/160 (76.88%), Postives = 136/160 (85.00%), Query Frame = 0

Query: 1   MANGHSICETMGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLE 60
           M  G SICE M SESIS+K +YDISMSKRTRKPAKIQDELQNL PN+ +DLNV + DQ  
Sbjct: 1   MDYGLSICEAMESESISHKHYYDISMSKRTRKPAKIQDELQNLTPNN-EDLNVDNRDQFG 60

Query: 61  SPATKEFENNDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKK 120
           SP TK FENN+HKSLKQL+N E KAET+ G DEG RGRNSLGQHFS+EEM N NLQIVKK
Sbjct: 61  SPTTKGFENNEHKSLKQLMNEEEKAETRLGEDEGSRGRNSLGQHFSKEEM-NKNLQIVKK 120

Query: 121 QHHDGLQGVKLKKVIGKFLRNLIKGGDQHQLKKPRKKAFL 161
           QH DGLQGVKLKKV+G FLR+LIKGGD+HQLKKP KK+FL
Sbjct: 121 QHRDGLQGVKLKKVVGNFLRSLIKGGDKHQLKKPTKKSFL 158

BLAST of Spg013768 vs. NCBI nr
Match: XP_022959694.1 (uncharacterized protein LOC111460691 [Cucurbita moschata])

HSP 1 Score: 222.2 bits (565), Expect = 3.1e-54
Identity = 121/159 (76.10%), Postives = 134/159 (84.28%), Query Frame = 0

Query: 1   MANGHSICETMGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLE 60
           MA G SI E M SESIS+K +YDISMSKRTRKPAKIQDELQNL PN+ +DLNV + D+  
Sbjct: 1   MAYGLSISEAMESESISHKHYYDISMSKRTRKPAKIQDELQNLTPNN-EDLNVDNRDRFG 60

Query: 61  SPATKEFENNDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKK 120
           SP TK FENN+HKSLKQL+N E KAET+ G DEGGRGRNSLGQHFS+EEM N NLQIVKK
Sbjct: 61  SPTTKGFENNEHKSLKQLMNEEEKAETRLGEDEGGRGRNSLGQHFSKEEM-NKNLQIVKK 120

Query: 121 QHHDGLQGVKLKKVIGKFLRNLIKGGDQHQLKKPRKKAF 160
           QH DGLQGVKLKKV+G FLR+LIKGGD+HQLKKP K  F
Sbjct: 121 QHRDGLQGVKLKKVVGNFLRSLIKGGDKHQLKKPTKNHF 157

BLAST of Spg013768 vs. NCBI nr
Match: KAG7025689.1 (hypothetical protein SDJN02_12187, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 220.7 bits (561), Expect = 9.1e-54
Identity = 121/160 (75.62%), Postives = 135/160 (84.38%), Query Frame = 0

Query: 1   MANGHSICETMGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLE 60
           MA G SI E M  ESIS+K +YDISMSKRTRKPAKIQDELQNL PN+ +DLNV + D+  
Sbjct: 1   MAYGLSISEAMERESISHKHYYDISMSKRTRKPAKIQDELQNLTPNN-EDLNVDNRDRFG 60

Query: 61  SPATKEFENNDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKK 120
           SP TK FENN+HKSLKQL+N E KAET+ G DEGGR RNSLGQHFS+EEM N NLQIVKK
Sbjct: 61  SPTTKGFENNEHKSLKQLMNEEEKAETRLGEDEGGRRRNSLGQHFSKEEM-NKNLQIVKK 120

Query: 121 QHHDGLQGVKLKKVIGKFLRNLIKGGDQHQLKKPRKKAFL 161
           QH DGLQGVKLKKV+G FLR+LIKGGD+HQLKKP KK+FL
Sbjct: 121 QHRDGLQGVKLKKVVGIFLRSLIKGGDKHQLKKPTKKSFL 158

BLAST of Spg013768 vs. NCBI nr
Match: KAG6593342.1 (hypothetical protein SDJN03_12818, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 212.2 bits (539), Expect = 3.2e-51
Identity = 115/150 (76.67%), Postives = 129/150 (86.00%), Query Frame = 0

Query: 11  MGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLESPATKEFENN 70
           M  ESIS+K +YDISMSKRTRKPAKIQDELQNL PN+ +DLNV + D+  SP TK FENN
Sbjct: 1   MERESISHKHYYDISMSKRTRKPAKIQDELQNLTPNN-EDLNVDNRDRFGSPTTKGFENN 60

Query: 71  DHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKKQHHDGLQGVK 130
           +HKSLKQL+N E KAET+ G DEGGR RNSLGQHFS+EEM N NLQIVKKQH DGLQGVK
Sbjct: 61  EHKSLKQLMNEEEKAETRLGEDEGGRRRNSLGQHFSKEEM-NKNLQIVKKQHRDGLQGVK 120

Query: 131 LKKVIGKFLRNLIKGGDQHQLKKPRKKAFL 161
           LKKV+G FLR+LIKGGD+HQLKKP KK+FL
Sbjct: 121 LKKVVGIFLRSLIKGGDKHQLKKPTKKSFL 148

BLAST of Spg013768 vs. NCBI nr
Match: XP_038896195.1 (uncharacterized protein LOC120084478 [Benincasa hispida])

HSP 1 Score: 209.1 bits (531), Expect = 2.7e-50
Identity = 126/155 (81.29%), Postives = 135/155 (87.10%), Query Frame = 0

Query: 11  MGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNV-GDGDQLESPATKEFE- 70
           MGSESIS+K HYDISMSKRTRKPAKIQDELQNLA N+ DDLNV G+GD+ ESPATK FE 
Sbjct: 1   MGSESISHKHHYDISMSKRTRKPAKIQDELQNLALNN-DDLNVIGEGDRFESPATKGFEI 60

Query: 71  NNDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKKQHHDGLQG 130
            ND KSL+QLINGEGK ET+S  DEG RGRNSLGQHFS+EE+  NNLQIVKKQH DGLQG
Sbjct: 61  ENDRKSLEQLINGEGKEETRS--DEGNRGRNSLGQHFSKEEI--NNLQIVKKQHQDGLQG 120

Query: 131 VKLKKVIGKFLRNLIK-GGDQHQL-KKP-RKKAFL 161
           VKLKKV+GKFLRNLIK GGDQHQL KKP RKK FL
Sbjct: 121 VKLKKVVGKFLRNLIKGGGDQHQLMKKPIRKKPFL 150

BLAST of Spg013768 vs. ExPASy TrEMBL
Match: A0A6J1KW04 (uncharacterized protein LOC111497689 OS=Cucurbita maxima OX=3661 GN=LOC111497689 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.6e-56
Identity = 123/160 (76.88%), Postives = 136/160 (85.00%), Query Frame = 0

Query: 1   MANGHSICETMGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLE 60
           M  G SICE M SESIS+K +YDISMSKRTRKPAKIQDELQNL PN+ +DLNV + DQ  
Sbjct: 1   MDYGLSICEAMESESISHKHYYDISMSKRTRKPAKIQDELQNLTPNN-EDLNVDNRDQFG 60

Query: 61  SPATKEFENNDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKK 120
           SP TK FENN+HKSLKQL+N E KAET+ G DEG RGRNSLGQHFS+EEM N NLQIVKK
Sbjct: 61  SPTTKGFENNEHKSLKQLMNEEEKAETRLGEDEGSRGRNSLGQHFSKEEM-NKNLQIVKK 120

Query: 121 QHHDGLQGVKLKKVIGKFLRNLIKGGDQHQLKKPRKKAFL 161
           QH DGLQGVKLKKV+G FLR+LIKGGD+HQLKKP KK+FL
Sbjct: 121 QHRDGLQGVKLKKVVGNFLRSLIKGGDKHQLKKPTKKSFL 158

BLAST of Spg013768 vs. ExPASy TrEMBL
Match: A0A6J1H8U7 (uncharacterized protein LOC111460691 OS=Cucurbita moschata OX=3662 GN=LOC111460691 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.5e-54
Identity = 121/159 (76.10%), Postives = 134/159 (84.28%), Query Frame = 0

Query: 1   MANGHSICETMGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLE 60
           MA G SI E M SESIS+K +YDISMSKRTRKPAKIQDELQNL PN+ +DLNV + D+  
Sbjct: 1   MAYGLSISEAMESESISHKHYYDISMSKRTRKPAKIQDELQNLTPNN-EDLNVDNRDRFG 60

Query: 61  SPATKEFENNDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKK 120
           SP TK FENN+HKSLKQL+N E KAET+ G DEGGRGRNSLGQHFS+EEM N NLQIVKK
Sbjct: 61  SPTTKGFENNEHKSLKQLMNEEEKAETRLGEDEGGRGRNSLGQHFSKEEM-NKNLQIVKK 120

Query: 121 QHHDGLQGVKLKKVIGKFLRNLIKGGDQHQLKKPRKKAF 160
           QH DGLQGVKLKKV+G FLR+LIKGGD+HQLKKP K  F
Sbjct: 121 QHRDGLQGVKLKKVVGNFLRSLIKGGDKHQLKKPTKNHF 157

BLAST of Spg013768 vs. ExPASy TrEMBL
Match: A0A6J1DDD0 (uncharacterized protein LOC111020003 OS=Momordica charantia OX=3673 GN=LOC111020003 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 5.0e-50
Identity = 116/151 (76.82%), Postives = 129/151 (85.43%), Query Frame = 0

Query: 11  MGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLESPATKEFENN 70
           MGSESIS++RHYDISMSKRTRKPAKI+DELQNL+ N  D L      Q+ESP TK FENN
Sbjct: 1   MGSESISHQRHYDISMSKRTRKPAKIRDELQNLSLNKDDLL---PSHQVESPPTKGFENN 60

Query: 71  DHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVK-KQHHDGLQGV 130
           DHKSLKQLI GEGKAETKSGADEGGRGR+SLGQHF+E++   NNLQ+V+ KQ  DGLQ V
Sbjct: 61  DHKSLKQLITGEGKAETKSGADEGGRGRSSLGQHFNEDK---NNLQMVRSKQQPDGLQRV 120

Query: 131 KLKKVIGKFLRNLIKGGDQHQLKKPRKKAFL 161
           KLKKV+GKFLRNLIKGGDQH LKKPRKK+ L
Sbjct: 121 KLKKVVGKFLRNLIKGGDQHHLKKPRKKSLL 145

BLAST of Spg013768 vs. ExPASy TrEMBL
Match: A0A0A0KBK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430160 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.4e-44
Identity = 114/155 (73.55%), Postives = 125/155 (80.65%), Query Frame = 0

Query: 11  MGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLESPATKEFENN 70
           MGSESIS+K+HYDISMSKRTRKPAKIQDELQ L  ND D + +G GDQ E        NN
Sbjct: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEI-------NN 60

Query: 71  DHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKKQHHDGLQGVK 130
           DHKSLKQLI+GEGKAE +S  DEG R RNSLGQHFS+EE+  NNLQIVKKQH DGLQGVK
Sbjct: 61  DHKSLKQLISGEGKAEIRS--DEGNRERNSLGQHFSKEEI--NNLQIVKKQHQDGLQGVK 120

Query: 131 LKKVIGKFLRNLIK-GGDQHQ---LKKP-RKKAFL 161
           LKKV+GKFLRNLIK GGD HQ   +KKP RKK+FL
Sbjct: 121 LKKVVGKFLRNLIKGGGDHHQHQLMKKPIRKKSFL 144

BLAST of Spg013768 vs. ExPASy TrEMBL
Match: A0A5A7US55 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001280 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 9.2e-44
Identity = 113/155 (72.90%), Postives = 125/155 (80.65%), Query Frame = 0

Query: 11  MGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGD-GDQLESPATKEFEN 70
           MGSESIS+K+HYDISMSKRTRKPAKIQDELQN    D D L++ D GD+ ES       N
Sbjct: 1   MGSESISHKQHYDISMSKRTRKPAKIQDELQNFTSKD-DGLSIIDKGDRSES-------N 60

Query: 71  NDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKKQHHDGLQGV 130
           NDHKSLKQLI+GEGKAET+   DEG R RNSLGQHFS+EE+  NNLQIVKKQH DGLQGV
Sbjct: 61  NDHKSLKQLISGEGKAETR--LDEGNRERNSLGQHFSKEEI--NNLQIVKKQHQDGLQGV 120

Query: 131 KLKKVIGKFLRNLIKGGDQHQ---LKKP-RKKAFL 161
           KLKKV+GKFLRNLIKGG  HQ   +KKP RKK+FL
Sbjct: 121 KLKKVVGKFLRNLIKGGGDHQHQLMKKPTRKKSFL 143

BLAST of Spg013768 vs. TAIR 10
Match: AT2G31930.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.4e-04
Identity = 45/145 (31.03%), Postives = 74/145 (51.03%), Query Frame = 0

Query: 11  MGSESIS-YKRHYDISMSKRTRKP-AKIQDELQNLAPNDVDDLNVGDGDQLESPATKEFE 70
           MGSE ++  K  +D+SMSKRTRKP + + +++ + A          D +Q E    KE  
Sbjct: 1   MGSEVVNPTKPRFDLSMSKRTRKPWSSLINDMHHHAICTQSSQPKPDKEQ-EQIEDKEI- 60

Query: 71  NNDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKKQHHDGLQG 130
             D KSL  L+    + + K   +     ++SL QHF + E     +Q+V K+   G  G
Sbjct: 61  --DRKSLNNLM----RCDEKLNGEADVNNKSSLDQHFEDGEGIKPTMQLVVKKEKQG--G 120

Query: 131 VKLKKVIGKFLR---NLIKGGDQHQ 151
           +K K ++G++++    LIK    H+
Sbjct: 121 LKFKGMVGRYVKVWSGLIKAKRDHK 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023004344.17.4e-5676.88uncharacterized protein LOC111497689 [Cucurbita maxima][more]
XP_022959694.13.1e-5476.10uncharacterized protein LOC111460691 [Cucurbita moschata][more]
KAG7025689.19.1e-5475.63hypothetical protein SDJN02_12187, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6593342.13.2e-5176.67hypothetical protein SDJN03_12818, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038896195.12.7e-5081.29uncharacterized protein LOC120084478 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1KW043.6e-5676.88uncharacterized protein LOC111497689 OS=Cucurbita maxima OX=3661 GN=LOC111497689... [more]
A0A6J1H8U71.5e-5476.10uncharacterized protein LOC111460691 OS=Cucurbita moschata OX=3662 GN=LOC1114606... [more]
A0A6J1DDD05.0e-5076.82uncharacterized protein LOC111020003 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A0A0KBK81.4e-4473.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430160 PE=4 SV=1[more]
A0A5A7US559.2e-4472.90Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
AT2G31930.11.4e-0431.03unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..79

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg013768.1Spg013768.1mRNA