Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAATGGCCATTCCATTTGTGAGACAATGGGGAGTGAAAGCATATCTTATAAACGCCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGCTTCAAAACCTCGCACCAAACGATGTCGATGATCTTAACGTTGGTGACGGAGATCAACTCGAGAGTCCTGCAACAAAAGAGTTCGAGAACAACGACCACAAAAGCTTAAAACAACTCATCAATGGCGAAGGGAAAGCGGAGACGAAGTCGGGAGCCGACGAGGGCGGTCGAGGAAGGAACTCGCTCGGGCAACACTTTAGTGAAGAAGAGATGAACAATAATAATCTTCAAATTGTGAAGAAACAACATCATGATGGACTACAAGGAGTGAAGCTGAAAAAAGTGATTGGAAAATTTTTGAGAAATTTGATCAAAGGTGGGGATCAACACCAGCTGAAGAAGCCAAGAAAAAAGGCTTTTCTCTAA
mRNA sequence
ATGGCCAATGGCCATTCCATTTGTGAGACAATGGGGAGTGAAAGCATATCTTATAAACGCCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGCTTCAAAACCTCGCACCAAACGATGTCGATGATCTTAACGTTGGTGACGGAGATCAACTCGAGAGTCCTGCAACAAAAGAGTTCGAGAACAACGACCACAAAAGCTTAAAACAACTCATCAATGGCGAAGGGAAAGCGGAGACGAAGTCGGGAGCCGACGAGGGCGGTCGAGGAAGGAACTCGCTCGGGCAACACTTTAGTGAAGAAGAGATGAACAATAATAATCTTCAAATTGTGAAGAAACAACATCATGATGGACTACAAGGAGTGAAGCTGAAAAAAGTGATTGGAAAATTTTTGAGAAATTTGATCAAAGGTGGGGATCAACACCAGCTGAAGAAGCCAAGAAAAAAGGCTTTTCTCTAA
Coding sequence (CDS)
ATGGCCAATGGCCATTCCATTTGTGAGACAATGGGGAGTGAAAGCATATCTTATAAACGCCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGCTTCAAAACCTCGCACCAAACGATGTCGATGATCTTAACGTTGGTGACGGAGATCAACTCGAGAGTCCTGCAACAAAAGAGTTCGAGAACAACGACCACAAAAGCTTAAAACAACTCATCAATGGCGAAGGGAAAGCGGAGACGAAGTCGGGAGCCGACGAGGGCGGTCGAGGAAGGAACTCGCTCGGGCAACACTTTAGTGAAGAAGAGATGAACAATAATAATCTTCAAATTGTGAAGAAACAACATCATGATGGACTACAAGGAGTGAAGCTGAAAAAAGTGATTGGAAAATTTTTGAGAAATTTGATCAAAGGTGGGGATCAACACCAGCTGAAGAAGCCAAGAAAAAAGGCTTTTCTCTAA
Protein sequence
MANGHSICETMGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLESPATKEFENNDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKKQHHDGLQGVKLKKVIGKFLRNLIKGGDQHQLKKPRKKAFL
Homology
BLAST of Spg013768 vs. NCBI nr
Match:
XP_023004344.1 (uncharacterized protein LOC111497689 [Cucurbita maxima])
HSP 1 Score: 227.6 bits (579), Expect = 7.4e-56
Identity = 123/160 (76.88%), Postives = 136/160 (85.00%), Query Frame = 0
Query: 1 MANGHSICETMGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLE 60
M G SICE M SESIS+K +YDISMSKRTRKPAKIQDELQNL PN+ +DLNV + DQ
Sbjct: 1 MDYGLSICEAMESESISHKHYYDISMSKRTRKPAKIQDELQNLTPNN-EDLNVDNRDQFG 60
Query: 61 SPATKEFENNDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKK 120
SP TK FENN+HKSLKQL+N E KAET+ G DEG RGRNSLGQHFS+EEM N NLQIVKK
Sbjct: 61 SPTTKGFENNEHKSLKQLMNEEEKAETRLGEDEGSRGRNSLGQHFSKEEM-NKNLQIVKK 120
Query: 121 QHHDGLQGVKLKKVIGKFLRNLIKGGDQHQLKKPRKKAFL 161
QH DGLQGVKLKKV+G FLR+LIKGGD+HQLKKP KK+FL
Sbjct: 121 QHRDGLQGVKLKKVVGNFLRSLIKGGDKHQLKKPTKKSFL 158
BLAST of Spg013768 vs. NCBI nr
Match:
XP_022959694.1 (uncharacterized protein LOC111460691 [Cucurbita moschata])
HSP 1 Score: 222.2 bits (565), Expect = 3.1e-54
Identity = 121/159 (76.10%), Postives = 134/159 (84.28%), Query Frame = 0
Query: 1 MANGHSICETMGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLE 60
MA G SI E M SESIS+K +YDISMSKRTRKPAKIQDELQNL PN+ +DLNV + D+
Sbjct: 1 MAYGLSISEAMESESISHKHYYDISMSKRTRKPAKIQDELQNLTPNN-EDLNVDNRDRFG 60
Query: 61 SPATKEFENNDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKK 120
SP TK FENN+HKSLKQL+N E KAET+ G DEGGRGRNSLGQHFS+EEM N NLQIVKK
Sbjct: 61 SPTTKGFENNEHKSLKQLMNEEEKAETRLGEDEGGRGRNSLGQHFSKEEM-NKNLQIVKK 120
Query: 121 QHHDGLQGVKLKKVIGKFLRNLIKGGDQHQLKKPRKKAF 160
QH DGLQGVKLKKV+G FLR+LIKGGD+HQLKKP K F
Sbjct: 121 QHRDGLQGVKLKKVVGNFLRSLIKGGDKHQLKKPTKNHF 157
BLAST of Spg013768 vs. NCBI nr
Match:
KAG7025689.1 (hypothetical protein SDJN02_12187, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 220.7 bits (561), Expect = 9.1e-54
Identity = 121/160 (75.62%), Postives = 135/160 (84.38%), Query Frame = 0
Query: 1 MANGHSICETMGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLE 60
MA G SI E M ESIS+K +YDISMSKRTRKPAKIQDELQNL PN+ +DLNV + D+
Sbjct: 1 MAYGLSISEAMERESISHKHYYDISMSKRTRKPAKIQDELQNLTPNN-EDLNVDNRDRFG 60
Query: 61 SPATKEFENNDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKK 120
SP TK FENN+HKSLKQL+N E KAET+ G DEGGR RNSLGQHFS+EEM N NLQIVKK
Sbjct: 61 SPTTKGFENNEHKSLKQLMNEEEKAETRLGEDEGGRRRNSLGQHFSKEEM-NKNLQIVKK 120
Query: 121 QHHDGLQGVKLKKVIGKFLRNLIKGGDQHQLKKPRKKAFL 161
QH DGLQGVKLKKV+G FLR+LIKGGD+HQLKKP KK+FL
Sbjct: 121 QHRDGLQGVKLKKVVGIFLRSLIKGGDKHQLKKPTKKSFL 158
BLAST of Spg013768 vs. NCBI nr
Match:
KAG6593342.1 (hypothetical protein SDJN03_12818, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 212.2 bits (539), Expect = 3.2e-51
Identity = 115/150 (76.67%), Postives = 129/150 (86.00%), Query Frame = 0
Query: 11 MGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLESPATKEFENN 70
M ESIS+K +YDISMSKRTRKPAKIQDELQNL PN+ +DLNV + D+ SP TK FENN
Sbjct: 1 MERESISHKHYYDISMSKRTRKPAKIQDELQNLTPNN-EDLNVDNRDRFGSPTTKGFENN 60
Query: 71 DHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKKQHHDGLQGVK 130
+HKSLKQL+N E KAET+ G DEGGR RNSLGQHFS+EEM N NLQIVKKQH DGLQGVK
Sbjct: 61 EHKSLKQLMNEEEKAETRLGEDEGGRRRNSLGQHFSKEEM-NKNLQIVKKQHRDGLQGVK 120
Query: 131 LKKVIGKFLRNLIKGGDQHQLKKPRKKAFL 161
LKKV+G FLR+LIKGGD+HQLKKP KK+FL
Sbjct: 121 LKKVVGIFLRSLIKGGDKHQLKKPTKKSFL 148
BLAST of Spg013768 vs. NCBI nr
Match:
XP_038896195.1 (uncharacterized protein LOC120084478 [Benincasa hispida])
HSP 1 Score: 209.1 bits (531), Expect = 2.7e-50
Identity = 126/155 (81.29%), Postives = 135/155 (87.10%), Query Frame = 0
Query: 11 MGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNV-GDGDQLESPATKEFE- 70
MGSESIS+K HYDISMSKRTRKPAKIQDELQNLA N+ DDLNV G+GD+ ESPATK FE
Sbjct: 1 MGSESISHKHHYDISMSKRTRKPAKIQDELQNLALNN-DDLNVIGEGDRFESPATKGFEI 60
Query: 71 NNDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKKQHHDGLQG 130
ND KSL+QLINGEGK ET+S DEG RGRNSLGQHFS+EE+ NNLQIVKKQH DGLQG
Sbjct: 61 ENDRKSLEQLINGEGKEETRS--DEGNRGRNSLGQHFSKEEI--NNLQIVKKQHQDGLQG 120
Query: 131 VKLKKVIGKFLRNLIK-GGDQHQL-KKP-RKKAFL 161
VKLKKV+GKFLRNLIK GGDQHQL KKP RKK FL
Sbjct: 121 VKLKKVVGKFLRNLIKGGGDQHQLMKKPIRKKPFL 150
BLAST of Spg013768 vs. ExPASy TrEMBL
Match:
A0A6J1KW04 (uncharacterized protein LOC111497689 OS=Cucurbita maxima OX=3661 GN=LOC111497689 PE=4 SV=1)
HSP 1 Score: 227.6 bits (579), Expect = 3.6e-56
Identity = 123/160 (76.88%), Postives = 136/160 (85.00%), Query Frame = 0
Query: 1 MANGHSICETMGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLE 60
M G SICE M SESIS+K +YDISMSKRTRKPAKIQDELQNL PN+ +DLNV + DQ
Sbjct: 1 MDYGLSICEAMESESISHKHYYDISMSKRTRKPAKIQDELQNLTPNN-EDLNVDNRDQFG 60
Query: 61 SPATKEFENNDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKK 120
SP TK FENN+HKSLKQL+N E KAET+ G DEG RGRNSLGQHFS+EEM N NLQIVKK
Sbjct: 61 SPTTKGFENNEHKSLKQLMNEEEKAETRLGEDEGSRGRNSLGQHFSKEEM-NKNLQIVKK 120
Query: 121 QHHDGLQGVKLKKVIGKFLRNLIKGGDQHQLKKPRKKAFL 161
QH DGLQGVKLKKV+G FLR+LIKGGD+HQLKKP KK+FL
Sbjct: 121 QHRDGLQGVKLKKVVGNFLRSLIKGGDKHQLKKPTKKSFL 158
BLAST of Spg013768 vs. ExPASy TrEMBL
Match:
A0A6J1H8U7 (uncharacterized protein LOC111460691 OS=Cucurbita moschata OX=3662 GN=LOC111460691 PE=4 SV=1)
HSP 1 Score: 222.2 bits (565), Expect = 1.5e-54
Identity = 121/159 (76.10%), Postives = 134/159 (84.28%), Query Frame = 0
Query: 1 MANGHSICETMGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLE 60
MA G SI E M SESIS+K +YDISMSKRTRKPAKIQDELQNL PN+ +DLNV + D+
Sbjct: 1 MAYGLSISEAMESESISHKHYYDISMSKRTRKPAKIQDELQNLTPNN-EDLNVDNRDRFG 60
Query: 61 SPATKEFENNDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKK 120
SP TK FENN+HKSLKQL+N E KAET+ G DEGGRGRNSLGQHFS+EEM N NLQIVKK
Sbjct: 61 SPTTKGFENNEHKSLKQLMNEEEKAETRLGEDEGGRGRNSLGQHFSKEEM-NKNLQIVKK 120
Query: 121 QHHDGLQGVKLKKVIGKFLRNLIKGGDQHQLKKPRKKAF 160
QH DGLQGVKLKKV+G FLR+LIKGGD+HQLKKP K F
Sbjct: 121 QHRDGLQGVKLKKVVGNFLRSLIKGGDKHQLKKPTKNHF 157
BLAST of Spg013768 vs. ExPASy TrEMBL
Match:
A0A6J1DDD0 (uncharacterized protein LOC111020003 OS=Momordica charantia OX=3673 GN=LOC111020003 PE=4 SV=1)
HSP 1 Score: 207.2 bits (526), Expect = 5.0e-50
Identity = 116/151 (76.82%), Postives = 129/151 (85.43%), Query Frame = 0
Query: 11 MGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLESPATKEFENN 70
MGSESIS++RHYDISMSKRTRKPAKI+DELQNL+ N D L Q+ESP TK FENN
Sbjct: 1 MGSESISHQRHYDISMSKRTRKPAKIRDELQNLSLNKDDLL---PSHQVESPPTKGFENN 60
Query: 71 DHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVK-KQHHDGLQGV 130
DHKSLKQLI GEGKAETKSGADEGGRGR+SLGQHF+E++ NNLQ+V+ KQ DGLQ V
Sbjct: 61 DHKSLKQLITGEGKAETKSGADEGGRGRSSLGQHFNEDK---NNLQMVRSKQQPDGLQRV 120
Query: 131 KLKKVIGKFLRNLIKGGDQHQLKKPRKKAFL 161
KLKKV+GKFLRNLIKGGDQH LKKPRKK+ L
Sbjct: 121 KLKKVVGKFLRNLIKGGDQHHLKKPRKKSLL 145
BLAST of Spg013768 vs. ExPASy TrEMBL
Match:
A0A0A0KBK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430160 PE=4 SV=1)
HSP 1 Score: 189.1 bits (479), Expect = 1.4e-44
Identity = 114/155 (73.55%), Postives = 125/155 (80.65%), Query Frame = 0
Query: 11 MGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGDGDQLESPATKEFENN 70
MGSESIS+K+HYDISMSKRTRKPAKIQDELQ L ND D + +G GDQ E NN
Sbjct: 1 MGSESISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEI-------NN 60
Query: 71 DHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKKQHHDGLQGVK 130
DHKSLKQLI+GEGKAE +S DEG R RNSLGQHFS+EE+ NNLQIVKKQH DGLQGVK
Sbjct: 61 DHKSLKQLISGEGKAEIRS--DEGNRERNSLGQHFSKEEI--NNLQIVKKQHQDGLQGVK 120
Query: 131 LKKVIGKFLRNLIK-GGDQHQ---LKKP-RKKAFL 161
LKKV+GKFLRNLIK GGD HQ +KKP RKK+FL
Sbjct: 121 LKKVVGKFLRNLIKGGGDHHQHQLMKKPIRKKSFL 144
BLAST of Spg013768 vs. ExPASy TrEMBL
Match:
A0A5A7US55 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001280 PE=4 SV=1)
HSP 1 Score: 186.4 bits (472), Expect = 9.2e-44
Identity = 113/155 (72.90%), Postives = 125/155 (80.65%), Query Frame = 0
Query: 11 MGSESISYKRHYDISMSKRTRKPAKIQDELQNLAPNDVDDLNVGD-GDQLESPATKEFEN 70
MGSESIS+K+HYDISMSKRTRKPAKIQDELQN D D L++ D GD+ ES N
Sbjct: 1 MGSESISHKQHYDISMSKRTRKPAKIQDELQNFTSKD-DGLSIIDKGDRSES-------N 60
Query: 71 NDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKKQHHDGLQGV 130
NDHKSLKQLI+GEGKAET+ DEG R RNSLGQHFS+EE+ NNLQIVKKQH DGLQGV
Sbjct: 61 NDHKSLKQLISGEGKAETR--LDEGNRERNSLGQHFSKEEI--NNLQIVKKQHQDGLQGV 120
Query: 131 KLKKVIGKFLRNLIKGGDQHQ---LKKP-RKKAFL 161
KLKKV+GKFLRNLIKGG HQ +KKP RKK+FL
Sbjct: 121 KLKKVVGKFLRNLIKGGGDHQHQLMKKPTRKKSFL 143
BLAST of Spg013768 vs. TAIR 10
Match:
AT2G31930.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )
HSP 1 Score: 43.9 bits (102), Expect = 1.4e-04
Identity = 45/145 (31.03%), Postives = 74/145 (51.03%), Query Frame = 0
Query: 11 MGSESIS-YKRHYDISMSKRTRKP-AKIQDELQNLAPNDVDDLNVGDGDQLESPATKEFE 70
MGSE ++ K +D+SMSKRTRKP + + +++ + A D +Q E KE
Sbjct: 1 MGSEVVNPTKPRFDLSMSKRTRKPWSSLINDMHHHAICTQSSQPKPDKEQ-EQIEDKEI- 60
Query: 71 NNDHKSLKQLINGEGKAETKSGADEGGRGRNSLGQHFSEEEMNNNNLQIVKKQHHDGLQG 130
D KSL L+ + + K + ++SL QHF + E +Q+V K+ G G
Sbjct: 61 --DRKSLNNLM----RCDEKLNGEADVNNKSSLDQHFEDGEGIKPTMQLVVKKEKQG--G 120
Query: 131 VKLKKVIGKFLR---NLIKGGDQHQ 151
+K K ++G++++ LIK H+
Sbjct: 121 LKFKGMVGRYVKVWSGLIKAKRDHK 135
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023004344.1 | 7.4e-56 | 76.88 | uncharacterized protein LOC111497689 [Cucurbita maxima] | [more] |
XP_022959694.1 | 3.1e-54 | 76.10 | uncharacterized protein LOC111460691 [Cucurbita moschata] | [more] |
KAG7025689.1 | 9.1e-54 | 75.63 | hypothetical protein SDJN02_12187, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6593342.1 | 3.2e-51 | 76.67 | hypothetical protein SDJN03_12818, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_038896195.1 | 2.7e-50 | 81.29 | uncharacterized protein LOC120084478 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1KW04 | 3.6e-56 | 76.88 | uncharacterized protein LOC111497689 OS=Cucurbita maxima OX=3661 GN=LOC111497689... | [more] |
A0A6J1H8U7 | 1.5e-54 | 76.10 | uncharacterized protein LOC111460691 OS=Cucurbita moschata OX=3662 GN=LOC1114606... | [more] |
A0A6J1DDD0 | 5.0e-50 | 76.82 | uncharacterized protein LOC111020003 OS=Momordica charantia OX=3673 GN=LOC111020... | [more] |
A0A0A0KBK8 | 1.4e-44 | 73.55 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430160 PE=4 SV=1 | [more] |
A0A5A7US55 | 9.2e-44 | 72.90 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
AT2G31930.1 | 1.4e-04 | 31.03 | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... | [more] |