Spg013727 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGACTTTGCAGTTGCACCATCCGCTCTGGAAATTGGTCGGGTGAAGCAGTGACAAGTTTCTTCGAGCTCTCGTTTGTTTTTAATTATCTGATCAAAATAGATGTTTACACTCTCCTAGTCCTTGGAGTTGGGACACTATGTTTATTTGTTTCAGAGAGTACCCATTGTTTTATAAATTGTAACCATGTTCATTGTAATTATCTACTGGACATATCCATCCATGCCAGGAAATTTTGGGAACTTTCATAAGATGCATTTATATTGCAGGTGGAATCACTGACCAACCAGGAAGAAGTTGAGTTGCGTACGAAGATTGAAGCCCTTGGACTTGAAGTTACAAAAGTACCCTCAAAGTCCTTAAAGCAGCTGGATGAAGTTAGTCTGGTTTCCTTTATACATTCATTGCATTTATCTTTGTTCCATTGCAAGCATTTTCTTGAAGAGATTGAATCTAGTGTCAAAAAAGTTTCCTTTCTATTTACCTATTTTATGCCCTCTATTCAGATGGAAATTGCCAAGGAGTTGGATAAATTATCTGAAAAGCTAGATGATGTGGATGAAATGATTTCTTCAGCAATGGCTGCAGATCCACAGGTGCAGTCTCTGTTGAGTGACACTGCTGATATTTGGATGCCAGTGATAACTGCTACGGCTGATGATCGACGAAAATTTACAGCTTCAGTTGGAGAAAATTCAGAAGCAGAAGAGAATTGTGCCAGTTAGATAAATGTTTTTTTTTTTTTTTTTTGTTTATTTAAGGGATAAGGAAAGTAATTTCAATTCTCTATCTCAATTTTGTTATATTCGATAAAGAATGTTCCGACTCATAACTTTAGCTTTTACAATGGTTGGAATGTGTTTTTCCAACAGATAATTTATTGTATCATCTTGTCTGTAGAAATCCTTCATAATTATCTAAAGAAAAAAAAGGTACTAAGCCTTTTTATTGATGTGAAGTAAAATCAAATATATTTTCTTTACCATTA ATGAAGACTTTGCAGTTGCACCATCCGCTCTGGAAATTGGTGGAATCACTGACCAACCAGGAAGAAGTTGAGTTGCGTACGAAGATTGAAGCCCTTGGACTTGAAGTTACAAAAGTACCCTCAAAGTCCTTAAAGCAGCTGGATGAAGTTAGTCTGATGGAAATTGCCAAGGAGTTGGATAAATTATCTGAAAAGCTAGATGATGTGGATGAAATGATTTCTTCAGCAATGGCTGCAGATCCACAGGTGCAGTCTCTGTTGAGTGACACTGCTGATATTTGGATGCCAGTGATAACTGCTACGGCTGATGATCGACGAAAATTTACAGCTTCAGTTGGAGAAAATTCAGAAGCAGAAGAGAATTGTGCCAGTTAG ATGAAGACTTTGCAGTTGCACCATCCGCTCTGGAAATTGGTGGAATCACTGACCAACCAGGAAGAAGTTGAGTTGCGTACGAAGATTGAAGCCCTTGGACTTGAAGTTACAAAAGTACCCTCAAAGTCCTTAAAGCAGCTGGATGAAGTTAGTCTGATGGAAATTGCCAAGGAGTTGGATAAATTATCTGAAAAGCTAGATGATGTGGATGAAATGATTTCTTCAGCAATGGCTGCAGATCCACAGGTGCAGTCTCTGTTGAGTGACACTGCTGATATTTGGATGCCAGTGATAACTGCTACGGCTGATGATCGACGAAAATTTACAGCTTCAGTTGGAGAAAATTCAGAAGCAGAAGAGAATTGTGCCAGTTAG MKTLQLHHPLWKLVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSLMEIAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITATADDRRKFTASVGENSEAEENCAS Homology
BLAST of Spg013727 vs. NCBI nr
Match: KAG7014211.1 (hypothetical protein SDJN02_24386 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 196.1 bits (497), Expect = 1.9e-46 Identity = 106/111 (95.50%), Postives = 109/111 (98.20%), Query Frame = 0
BLAST of Spg013727 vs. NCBI nr
Match: KAG7025681.1 (hypothetical protein SDJN02_12179, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 188.0 bits (476), Expect = 5.0e-44 Identity = 105/120 (87.50%), Postives = 108/120 (90.00%), Query Frame = 0
BLAST of Spg013727 vs. NCBI nr
Match: XP_022953424.1 (uncharacterized protein LOC111455983 [Cucurbita moschata] >XP_023547946.1 uncharacterized protein LOC111806741 [Cucurbita pepo subsp. pepo] >KAG6575661.1 hypothetical protein SDJN03_26300, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 186.0 bits (471), Expect = 1.9e-43 Identity = 103/111 (92.79%), Postives = 106/111 (95.50%), Query Frame = 0
BLAST of Spg013727 vs. NCBI nr
Match: XP_022991943.1 (uncharacterized protein LOC111488434 [Cucurbita maxima]) HSP 1 Score: 183.7 bits (465), Expect = 9.5e-43 Identity = 101/109 (92.66%), Postives = 105/109 (96.33%), Query Frame = 0
BLAST of Spg013727 vs. NCBI nr
Match: XP_038899531.1 (uncharacterized protein LOC120086812 [Benincasa hispida]) HSP 1 Score: 182.6 bits (462), Expect = 2.1e-42 Identity = 103/120 (85.83%), Postives = 109/120 (90.83%), Query Frame = 0
BLAST of Spg013727 vs. ExPASy TrEMBL
Match: A0A6J1GPL7 (uncharacterized protein LOC111455983 OS=Cucurbita moschata OX=3662 GN=LOC111455983 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 9.3e-44 Identity = 103/111 (92.79%), Postives = 106/111 (95.50%), Query Frame = 0
BLAST of Spg013727 vs. ExPASy TrEMBL
Match: A0A6J1JXP7 (uncharacterized protein LOC111488434 OS=Cucurbita maxima OX=3661 GN=LOC111488434 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 4.6e-43 Identity = 101/109 (92.66%), Postives = 105/109 (96.33%), Query Frame = 0
BLAST of Spg013727 vs. ExPASy TrEMBL
Match: A0A6J1KTB9 (uncharacterized protein LOC111498046 OS=Cucurbita maxima OX=3661 GN=LOC111498046 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 5.1e-42 Identity = 103/120 (85.83%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of Spg013727 vs. ExPASy TrEMBL
Match: A0A0A0KBJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429570 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 3.3e-41 Identity = 102/120 (85.00%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of Spg013727 vs. ExPASy TrEMBL
Match: A0A6J1H914 (uncharacterized protein LOC111461159 OS=Cucurbita moschata OX=3662 GN=LOC111461159 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 4.8e-40 Identity = 102/121 (84.30%), Postives = 106/121 (87.60%), Query Frame = 0
BLAST of Spg013727 vs. TAIR 10
Match: AT2G44360.1 (unknown protein; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 141.0 bits (354), Expect = 6.6e-34 Identity = 81/113 (71.68%), Postives = 95/113 (84.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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