Spg013710 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg013710
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold3: 46872241 .. 46875839 (+)
RNA-Seq ExpressionSpg013710
SyntenySpg013710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTGCCATAAAAGAAGGTGAATATCATTAAAAGTTTTAGATGACATTATTTTATTGTTCCAAGATATTTTCTATGGCTAATAAATTTTTAAATAATGGTAGGTTATATTATTATACCATCATTCATCTAAAAAAAAAAAATAATAGAGACCAAAGAATTCAAACCTTAAACCCATAAACAATAATTTAAACCAACTTAAGTTTCTGATTGAGCTGTCACAATTAAATAGACACGTATACAAGCTGAATAATTAAAGTGTTCGTCACAAGCTTTTTTTTTTCCTTATAAATAAAAAATTAGAATTTATTGATAATAGAGAAGACATTAAAAACATAAAACATAGAAAAATTAGGAATGATTTTTAAAATAAACCAATACTTACCTAAGCACTAAAAAGAGATGAATGAGTCCCACTAACCAATAAAAATGTTTTACATAAAAAATAAGTAAGAATTCTGTTTTTTTTTTTTTTTTACAATAAGTAAGGTGGAAAAGTTTGAACCTCTGATCTCTTGTCGATAATATATACTTTAACTAGTTGAACTAGATTCAAATTGACATAAGAGCTATTGCTTTTGCTCGTTGAAAGTGTTTTTACGGTCTAAAGAACTAGTGGTCCCATAGAATTAGTTAAGCAAAGAAAAAACAAAATTTAATCTACTAAAGCCACGATTATTGTTTAGGATGCTAAAATGGAGTCCTTGTCAAAAAAAAAAAGATGCTAAAATGGAGTGTTATGTAAGGAAAGTTAAATCTCCTAAAAAAAAAAAAAAAAAAAAGTTAAAAAGTTGTGTATGTCAAATATATAACTTGAAATTATTTATTTATTAAATAAAAAATAAAAAAGAGTGTAAAATATAAATAACCAAAAAAGTATTTTCTTAAAAAAAATACATGAAGTTGCAAAGTCATAGTGGGACAATCGTATATTACGTAGGCAACCGGTCACGTGTCGGTGGCCTCGTTTTCAGATATAAAACGGACTGCCCATTTGGTCACCTATAATTGGCGCTTCCCGTTTTCAATTTTTTCTCTCATAACTTTATTTTATCGTCCAATTCATTTCTCTGCTTCTCTGTCTCTCTCTCTCTCTCTCTCTCTGCAATTTCATAAACGCACTGATCGCAATTTCACTAGCGAAGAGGAACTGGAAGAAGCTTCAGAGTGAAAGGAGAGGGGGCAGTTCTGGCCGGACTAAGCACCATAGCCGTTCGACTCGGCGGCGGCACCGGCGGTGGCGGTGGAGGATTTTGGTACCGGAGGAAAAAGAAGAGGCGGAGCCGGAGGAAGACGAAAGTTAAGGATCGGTTTATGGAGCTTTGGCACAAGATGATTTTCCCTGTCCGACGAGTTTGGCTCGCTGTTTCCGCTCGAGTTAGGGCTCGGAAGAACGGTTAGTCGCTTAATACTCTTCTTCTTTCGCCTTCGAAGTTTTTTTTTGTCAAATCGGAGTTTGATTATGGCTTGATTTGATTGAATGTGATGATCTCGACTACATGAATTGCTTCTGATTGATGGAATTGTTGCTGTATTTCTGTTTCCATTAGTTTACTCTGGTTCTGGTTTTTGTCATCTGAACTGTGTGAACTCCATTATTGTTTCCATGATGCCATTTGGAGTTGCTTACTGCAGAGGAATTTGTTTGTAACAACATCTACAGTTAATTGCCATGAGAGGAAAATAGTAAAAAAAAAAAAAAAGTTTGGAAGATATTGAAGGAGCCACCTAGCTAGTGAACCGAAAGGTGAAAATACGGTTTATAATTCTAATTTCTTAGTCTTTTCCAGTTTTTTAATTCTTTTATCGACTTTGAATATGTTATATTATACCTTGATCTGTATGCAATAGTTATTAGCCACTTAATCCCAAGTCCAACCACTACGATAGAGATAGAGAGAGAGAGAGAGAGAGAGAGGGATGATTCTAGAAGATAATAAATGGCCATGTGATTATTCAACCTCTCCAGTACAATAATTTGGTTGGAAAAATCACAAGGAACCCATAATATGGTTGTGTATTATTATTTCTCCAAATTGACTCTAATTAAATGGCCAAAATATGGTTATGGACATCAAGTCCTTTTAATTTTGGGAATTTTAGTTTACAAAGTAGGTGTCTCTATGCTTAAACTACGAGTTATTTAATCTTAGGTCAAACATGATCTCTTGGAATATATAATTTTGTTCTTCAACTAAGATATTTATCCCAAGAAGTTTTCCCCATTTAATAATGCACAAAAAGGTCCCCACTGGCATTGCAGTTGAAGACAGAGTGAAAGATTAAAGCCACTTTTAAGCTTAAAGGTTTATTTTATAACAGTTTTGATTGTCCTGTTGTGATTCTTAACAGTCATCGTCCCACTTTAGACCAACGACGGCCACCAAATGCCCATTAGTTTTCGACTAGTGGTGACCCAATTTGATTTGTTTTTGCCCTCTATTACTATTATAAGCAGGAGGCCAAGAGGTGTGCCCGTCTTTAGACTTTTATTATTCTTTTTAGTATTGTCCAAGTCGCTTTTATTGACAATTTGACTAGCACCACAAATTTCCTCTACCCTCTTCAGTATCCACATTCCAAATTTCCAATATATATATATGTAGAGAGAGAGAGCTTAGGTGAATTGGAGTTAGGTGAGTTCTGTCCCTTTAGATGGGCTGGGCCCAAAGGCCCATTAAATTCTGAATTTGTTGTGTGTGGGTGGCCCCAAGCCCCCAAAAATCTCTGTTATTTGAACTTATCTTTCATCCATAAAGTTGCCCTTTAGGAAGCTAAGCTAAGCAATTGTGTGAACTTTGCTGCTAACAGGAGCTGGCCTTTTGAAGCTTCATGATGATGTAGAAACCTGTGGATATGAAGATGTGAAGGTGATGTGGGAAATGCTGCGTCGATCGGAGTCGGAGCTGGTCGGTCACCAACCGAAGCGCAAGCAGCGGCCGTTCTGGAGAGTCTCTGTGTGGTCCAACCATGCTGCTGCAGCCTCCTCTTACACTGCAACTCATGCTTGAGGGCCATCAAATCAACACTCTACTCTCTGTTCAGCACAGCTTCAATTCTCTGCGCCATCTCTTTGGTATCTTCAGCTTTTTTTAAACTAACAGCGCCAATGCTTGCAATGGCACAGAACTTTTTACCAACTTGTTCAAAGAAATGTGAAGTCTTTGCACACGCAGTTCATCTCTTCCACTTTGAGCAGACAAACGCCCTTTTGTAAGTAATAATAAAATTTTTGGTTCGTAGCTAAGAATCCTTCATGAATCGATGCCGCTGGGTTGGATATGTGTCCAAAAGTTGATGGGATCACTTGTAGTTTCTCATCTAAATGAAAAATGTCAAAATGAAAATCAATCAAAATCCAATGCTTAAGCACAAGCGTGATGTAAAGTGAGAATTTGAACATCCAACCGAAGTTTAGACATGTAATGTTTTAACTAGTTGAAATACTTAAACGAAATTTGTTATGATATTAGAGTATGGTTGATTTGAGTTTTACTGTATTGTTGTAAGGTTTAATGAAACAAATATTGATATTTAGACATAATTGACACAATGCAGGAGACATGATTGGGACCTAAATTGAAAACAATCCATAAAC

mRNA sequence

ATGCCTTGCCATAAAAGAAGAGGAACTGGAAGAAGCTTCAGAGTGAAAGGAGAGGGGGCAGTTCTGGCCGGACTAAGCACCATAGCCGTTCGACTCGGCGGCGGCACCGGCGGTGGCGGTGGAGGATTTTGGTACCGGAGGAAAAAGAAGAGGCGGAGCCGGAGGAAGACGAAAGTTAAGGATCGGTTTATGGAGCTTTGGCACAAGATGATTTTCCCTGTCCGACGAGTTTGGCTCGCTGTTTCCGCTCGAGTTAGGGCTCGGAAGAACGTTTACTCTGGTTCTGGTTTTTGTCATCTGAACTGTGTGAACTCCATTATTGTTTCCATGATGCCATTTGGAGTTGCTTACTGCAGAGGAATTTGA

Coding sequence (CDS)

ATGCCTTGCCATAAAAGAAGAGGAACTGGAAGAAGCTTCAGAGTGAAAGGAGAGGGGGCAGTTCTGGCCGGACTAAGCACCATAGCCGTTCGACTCGGCGGCGGCACCGGCGGTGGCGGTGGAGGATTTTGGTACCGGAGGAAAAAGAAGAGGCGGAGCCGGAGGAAGACGAAAGTTAAGGATCGGTTTATGGAGCTTTGGCACAAGATGATTTTCCCTGTCCGACGAGTTTGGCTCGCTGTTTCCGCTCGAGTTAGGGCTCGGAAGAACGTTTACTCTGGTTCTGGTTTTTGTCATCTGAACTGTGTGAACTCCATTATTGTTTCCATGATGCCATTTGGAGTTGCTTACTGCAGAGGAATTTGA

Protein sequence

MPCHKRRGTGRSFRVKGEGAVLAGLSTIAVRLGGGTGGGGGGFWYRRKKKRRSRRKTKVKDRFMELWHKMIFPVRRVWLAVSARVRARKNVYSGSGFCHLNCVNSIIVSMMPFGVAYCRGI
Homology
[Close]
BLAST of Spg013710 vs. NCBI nr
Match: KAG7014198.1 (hypothetical protein SDJN02_24373, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 119.0 bits (297), Expect = 2.8e-23
Identity = 68/95 (71.58%), Postives = 74/95 (77.89%), Query Frame = 0 

Query: 7   RGTGRSFRVKGEGAVLAGLSTIAVRLGGGTGGGGGGFWYRRKKKRRSRRKTKVKDRFMEL 66
           + +GR+   +   A LAGLSTIAVRLG   GGGGGGFWYRRKKK RSR KTKVK RFMEL
Sbjct: 36  KSSGRTVSER-SAAGLAGLSTIAVRLG---GGGGGGFWYRRKKKTRSRSKTKVKHRFMEL 95

Query: 67  WHKMIFPVRRVWLAVSARVRARKNVYSGSGFCHLN 102
           WHKMIFPVRRVWL VSARVRARK   SG+G   L+
Sbjct: 96  WHKMIFPVRRVWLTVSARVRARK---SGAGLLKLH 123

[Close]
BLAST of Spg013710 vs. NCBI nr
Match: KAG6575646.1 (hypothetical protein SDJN03_26285, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117.1 bits (292), Expect = 1.1e-22
Identity = 65/82 (79.27%), Postives = 67/82 (81.71%), Query Frame = 0 

Query: 20  AVLAGLSTIAVRLGGGTGGGGGGFWYRRKKKRRSRRKTKVKDRFMELWHKMIFPVRRVWL 79
           A LAGLSTIAVRL    GGGGGGFWYRRKKK RSR KTKVK RFMELWHKMIFPVRRVWL
Sbjct: 24  AGLAGLSTIAVRL---DGGGGGGFWYRRKKKTRSRSKTKVKHRFMELWHKMIFPVRRVWL 83

Query: 80  AVSARVRARKNVYSGSGFCHLN 102
            VSARVRARK   SG+G   L+
Sbjct: 84  TVSARVRARK---SGAGLLKLH 99

[Close]
BLAST of Spg013710 vs. NCBI nr
Match: XP_020414834.1 (uncharacterized protein LOC18784497 [Prunus persica] >XP_034206995.1 uncharacterized protein LOC117620861 [Prunus dulcis] >ONI16566.1 hypothetical protein PRUPE_3G106900 [Prunus persica] >VVA30297.1 PREDICTED: unnamed product [Prunus dulcis])

HSP 1 Score: 77.0 bits (188), Expect = 1.2e-10
Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 0 

Query: 18  EGAVLAGLSTIAVRLGGGTGGGGGGFWYRRKKKRRSRRKTKV-KDRFMELWHKMIFPVRR 77
           +GA LAG  +IA+R+      GGGG+    KKK + R+K KV K+R M+ WHKMIFPVRR
Sbjct: 6   KGAGLAGQRSIAIRV----SSGGGGY---NKKKIKGRKKVKVIKERLMDFWHKMIFPVRR 65

Query: 78  VWLAVSARVRARKNVYSGSGFCHLN 102
           VWL VSAR++ARKN   G+G   L+
Sbjct: 66  VWLTVSARIKARKN---GAGLLKLH 80

[Close]
BLAST of Spg013710 vs. NCBI nr
Match: KAF9688833.1 (hypothetical protein SADUNF_Sadunf01G0029100 [Salix dunnii])

HSP 1 Score: 77.0 bits (188), Expect = 1.2e-10
Identity = 44/84 (52.38%), Postives = 58/84 (69.05%), Query Frame = 0 

Query: 8   GTGRSFRVKGE-GAVLAGLSTIAVRLGGGTGGGGGGFWYRRKKKRRSRRKTKVKDRFMEL 67
           GT  + R+  + GA LAGL +IAVR+ GG G          ++++   +K KV+D  M+L
Sbjct: 61  GTYGTRRINNKLGAGLAGLKSIAVRVVGGFG----------RRRKAKTKKIKVEDELMDL 120

Query: 68  WHKMIFPVRRVWLAVSARVRARKN 91
           WHKMIFPVRRVWLAVSAR++ARKN
Sbjct: 121 WHKMIFPVRRVWLAVSARLKARKN 134

[Close]
BLAST of Spg013710 vs. NCBI nr
Match: OMO65950.1 (hypothetical protein COLO4_30895 [Corchorus olitorius])

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-10
Identity = 44/80 (55.00%), Postives = 54/80 (67.50%), Query Frame = 0 

Query: 22  LAGLSTIAVRLGGGTGGGGGGFWYRRKKKRRSRRKTKVKDRFMELWHKMIFPVRRVWLAV 81
           LAG  TI  R+ GG          RRKK   S++K KVK++FM+ WHKMIFPVRRVW AV
Sbjct: 11  LAGFKTITFRIFGGGN--------RRKKTILSKKKIKVKEKFMDWWHKMIFPVRRVWFAV 70

Query: 82  SARVRARKNVYSGSGFCHLN 102
           SARV+ARKN   G+G  +L+
Sbjct: 71  SARVKARKN---GAGLLNLH 79

[Close]
BLAST of Spg013710 vs. ExPASy TrEMBL
Match: A0A5E4FSC5 (PREDICTED: unnamed product OS=Prunus dulcis OX=3755 GN=ALMOND_2B017093 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 5.9e-11
Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 0 

Query: 18  EGAVLAGLSTIAVRLGGGTGGGGGGFWYRRKKKRRSRRKTKV-KDRFMELWHKMIFPVRR 77
           +GA LAG  +IA+R+      GGGG+    KKK + R+K KV K+R M+ WHKMIFPVRR
Sbjct: 6   KGAGLAGQRSIAIRV----SSGGGGY---NKKKIKGRKKVKVIKERLMDFWHKMIFPVRR 65

Query: 78  VWLAVSARVRARKNVYSGSGFCHLN 102
           VWL VSAR++ARKN   G+G   L+
Sbjct: 66  VWLTVSARIKARKN---GAGLLKLH 80

[Close]
BLAST of Spg013710 vs. ExPASy TrEMBL
Match: A0A251PYA8 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G106900 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 5.9e-11
Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 0 

Query: 18  EGAVLAGLSTIAVRLGGGTGGGGGGFWYRRKKKRRSRRKTKV-KDRFMELWHKMIFPVRR 77
           +GA LAG  +IA+R+      GGGG+    KKK + R+K KV K+R M+ WHKMIFPVRR
Sbjct: 6   KGAGLAGQRSIAIRV----SSGGGGY---NKKKIKGRKKVKVIKERLMDFWHKMIFPVRR 65

Query: 78  VWLAVSARVRARKNVYSGSGFCHLN 102
           VWL VSAR++ARKN   G+G   L+
Sbjct: 66  VWLTVSARIKARKN---GAGLLKLH 80

[Close]
BLAST of Spg013710 vs. ExPASy TrEMBL
Match: A0A1R3H6Q9 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_30895 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 7.7e-11
Identity = 44/80 (55.00%), Postives = 54/80 (67.50%), Query Frame = 0 

Query: 22  LAGLSTIAVRLGGGTGGGGGGFWYRRKKKRRSRRKTKVKDRFMELWHKMIFPVRRVWLAV 81
           LAG  TI  R+ GG          RRKK   S++K KVK++FM+ WHKMIFPVRRVW AV
Sbjct: 11  LAGFKTITFRIFGGGN--------RRKKTILSKKKIKVKEKFMDWWHKMIFPVRRVWFAV 70

Query: 82  SARVRARKNVYSGSGFCHLN 102
           SARV+ARKN   G+G  +L+
Sbjct: 71  SARVKARKN---GAGLLNLH 79

[Close]
BLAST of Spg013710 vs. ExPASy TrEMBL
Match: M5XI68 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa022433mg PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.0e-10
Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 0 

Query: 18 EGAVLAGLSTIAVRLGGGTGGGGGGFWYRRKKKRRSRRKTKV-KDRFMELWHKMIFPVRR 77
          +GA LAG  +IA+R+      GGGG+    KKK + R+K KV K+R M+ WHKMIFPVRR
Sbjct: 2  KGAGLAGQRSIAIRV----SSGGGGY---NKKKIKGRKKVKVIKERLMDFWHKMIFPVRR 61

Query: 78 VWLAVSARVRARKN 91
          VWL VSAR++ARKN
Sbjct: 62 VWLTVSARIKARKN 68

[Close]
BLAST of Spg013710 vs. ExPASy TrEMBL
Match: A0A314YLL6 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_30213 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-10
Identity = 47/85 (55.29%), Postives = 58/85 (68.24%), Query Frame = 0 

Query: 18  EGAVLAGLSTIAVRLGGGTGGGGGGFWYRRKKKRRSRRKTKV-KDRFMELWHKMIFPVRR 77
           +GA LAG  +IA+R+   TGGGG       KKK + R+K KV K+R M+ WHKMIFPVRR
Sbjct: 8   KGAGLAGQRSIAIRV--STGGGG-----YNKKKIKGRKKVKVIKERLMDFWHKMIFPVRR 67

Query: 78  VWLAVSARVRARKNVYSGSGFCHLN 102
           VWL VSAR +ARKN   G+G   L+
Sbjct: 68  VWLTVSARFKARKN---GAGLLKLH 82

The following BLAST results are available for this feature:
BLAST of Spg013710 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7014198.12.8e-2371.58hypothetical protein SDJN02_24373, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6575646.11.1e-2279.27hypothetical protein SDJN03_26285, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_020414834.11.2e-1054.12uncharacterized protein LOC18784497 [Prunus persica] >XP_034206995.1 uncharacter... [more]
KAF9688833.11.2e-1052.38hypothetical protein SADUNF_Sadunf01G0029100 [Salix dunnii][more]
OMO65950.11.6e-1055.00hypothetical protein COLO4_30895 [Corchorus olitorius][more]
BLAST of Spg013710 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg013710 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5E4FSC55.9e-1154.12PREDICTED: unnamed product OS=Prunus dulcis OX=3755 GN=ALMOND_2B017093 PE=4 SV=1[more]
A0A251PYA85.9e-1154.12Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G106900 PE=4 SV=1[more]
A0A1R3H6Q97.7e-1155.00Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_30895 PE=4 SV=1[more]
M5XI681.0e-1058.11Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa022433m... [more]
A0A314YLL61.7e-1055.29Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_302... [more]
BLAST of Spg013710 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg013710.1Spg013710.1mRNA