Spg013652 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg013652
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	signal recognition particle 43 kDa protein, chloroplastic-like
Location	scaffold3: 30307070 .. 30307957 (-)
RNA-Seq Expression	Spg013652
Synteny	Spg013652

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTATCTCATCAAATGGAAAGACGGCCATTCCCCTTCCTGGCTCCCCTCCGATTTCATCGCCAGAGACGTCGTCGCCGAGTACGAGACCCCCTGGTGGACCGCCGCCAAGAAGGCCGACCCATCCGACCTCCAATCGCTTATAGACGCCGCCGACGGCCGCGATCTCAACGCCATCGACGAGGACGGCAGGACCGCGCTCCTCTTCGTGGCTGGACTCGGGTCGGAGCCCTGCGTCAGACTATTGGCCGAAGCCGGCGTGAATCTCGACCACCGCGACAACAGCGGCGGGTTCACGGCGCTGCACATGGCGGCCGGGTACGTAAAGCCCGGAACGGTTGAGTTACTCGTGCAATTAGGCGCGGATCCGGAGGTGGAAGACGAGAAGGGTCGGACGCCGTTGGATCTAGCGAGGGAGATTCTGAAAGCGACGCCGAGGATTCAGTTGGCGAGGAGATTGGGGATGGAGAGAGTGATCGGGGCGCTGGAGAGGGTGGTTTTCGAGTACGCGGAGGTGGAGGCGCTGCTGGAGAAGAGAGGGAAGGGGGAGAATTTGGAGTATTTGGTGAAGTGGAAGGACGGGGAAGATAATGAGTGGGTGAAGGTGGGGCTGATTGCGGCGGATTTGGTGGCGGATTTTGAAGCTGGGTTGGAGTACGCGGTGGCGGAGGCGGTGGTCGGGAAAAGGGTTGGGGACGATGGGAAGATGGAGTATCTCGTCAAATGGACGGATATTCAGGATGCCACGTGGGAGCCTGAGACTAATGTGGATCCGGATTTGGTTAGGGAGTTTGAGGACGCTCAGAACAATGGTGGGCTTGGGCCCACTGCGAATGTTCAGGCCCAGCTTCAATCTCAGGCCCAATCCAGTAATAGTGGCCTCTGA

mRNA sequence

ATGGAGTATCTCATCAAATGGAAAGACGGCCATTCCCCTTCCTGGCTCCCCTCCGATTTCATCGCCAGAGACGTCGTCGCCGAGTACGAGACCCCCTGGTGGACCGCCGCCAAGAAGGCCGACCCATCCGACCTCCAATCGCTTATAGACGCCGCCGACGGCCGCGATCTCAACGCCATCGACGAGGACGGCAGGACCGCGCTCCTCTTCGTGGCTGGACTCGGGTCGGAGCCCTGCGTCAGACTATTGGCCGAAGCCGGCGTGAATCTCGACCACCGCGACAACAGCGGCGGGTTCACGGCGCTGCACATGGCGGCCGGGTACGTAAAGCCCGGAACGGTTGAGTTACTCGTGCAATTAGGCGCGGATCCGGAGGTGGAAGACGAGAAGGGTCGGACGCCGTTGGATCTAGCGAGGGAGATTCTGAAAGCGACGCCGAGGATTCAGTTGGCGAGGAGATTGGGGATGGAGAGAGTGATCGGGGCGCTGGAGAGGGTGGTTTTCGAGTACGCGGAGGTGGAGGCGCTGCTGGAGAAGAGAGGGAAGGGGGAGAATTTGGAGTATTTGGTGAAGTGGAAGGACGGGGAAGATAATGAGTGGGTGAAGGTGGGGCTGATTGCGGCGGATTTGGTGGCGGATTTTGAAGCTGGGTTGGAGTACGCGGTGGCGGAGGCGGTGGTCGGGAAAAGGGTTGGGGACGATGGGAAGATGGAGTATCTCGTCAAATGGACGGATATTCAGGATGCCACGTGGGAGCCTGAGACTAATGTGGATCCGGATTTGGTTAGGGAGTTTGAGGACGCTCAGAACAATGGTGGGCTTGGGCCCACTGCGAATGTTCAGGCCCAGCTTCAATCTCAGGCCCAATCCAGTAATAGTGGCCTCTGA

Coding sequence (CDS)

ATGGAGTATCTCATCAAATGGAAAGACGGCCATTCCCCTTCCTGGCTCCCCTCCGATTTCATCGCCAGAGACGTCGTCGCCGAGTACGAGACCCCCTGGTGGACCGCCGCCAAGAAGGCCGACCCATCCGACCTCCAATCGCTTATAGACGCCGCCGACGGCCGCGATCTCAACGCCATCGACGAGGACGGCAGGACCGCGCTCCTCTTCGTGGCTGGACTCGGGTCGGAGCCCTGCGTCAGACTATTGGCCGAAGCCGGCGTGAATCTCGACCACCGCGACAACAGCGGCGGGTTCACGGCGCTGCACATGGCGGCCGGGTACGTAAAGCCCGGAACGGTTGAGTTACTCGTGCAATTAGGCGCGGATCCGGAGGTGGAAGACGAGAAGGGTCGGACGCCGTTGGATCTAGCGAGGGAGATTCTGAAAGCGACGCCGAGGATTCAGTTGGCGAGGAGATTGGGGATGGAGAGAGTGATCGGGGCGCTGGAGAGGGTGGTTTTCGAGTACGCGGAGGTGGAGGCGCTGCTGGAGAAGAGAGGGAAGGGGGAGAATTTGGAGTATTTGGTGAAGTGGAAGGACGGGGAAGATAATGAGTGGGTGAAGGTGGGGCTGATTGCGGCGGATTTGGTGGCGGATTTTGAAGCTGGGTTGGAGTACGCGGTGGCGGAGGCGGTGGTCGGGAAAAGGGTTGGGGACGATGGGAAGATGGAGTATCTCGTCAAATGGACGGATATTCAGGATGCCACGTGGGAGCCTGAGACTAATGTGGATCCGGATTTGGTTAGGGAGTTTGAGGACGCTCAGAACAATGGTGGGCTTGGGCCCACTGCGAATGTTCAGGCCCAGCTTCAATCTCAGGCCCAATCCAGTAATAGTGGCCTCTGA

Protein sequence

MEYLIKWKDGHSPSWLPSDFIARDVVAEYETPWWTAAKKADPSDLQSLIDAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTPLDLAREILKATPRIQLARRLGMERVIGALERVVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAADLVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPETNVDPDLVREFEDAQNNGGLGPTANVQAQLQSQAQSSNSGL

Homology

[Close]

BLAST of Spg013652 vs. NCBI nr
Match: XP_038888741.1 (signal recognition particle 43 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 499.6 bits (1285), Expect = 1.9e-137
Identity = 246/292 (84.25%), Postives = 264/292 (90.41%), Query Frame = 0


Query: 1   MEYLIKWKDGHSPSWLPSDFIARDVVAEYETPWWTAAKKADPSDLQSLIDAADGRDLNAI 60
           MEYLIKWKDGHSPSW+PSDFIA+DVVAEYETPWWTAAKKAD S L+SLIDA DGRD +A+
Sbjct: 85  MEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAGDGRDFDAV 144

Query: 61  DEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPGTVELLVQL 120
           DEDGRTALLFVAGLGS PCVR+LAEAGVNLDHRDNSGGFTALH+AAGYVKP TVELLV+L
Sbjct: 145 DEDGRTALLFVAGLGSNPCVRMLAEAGVNLDHRDNSGGFTALHLAAGYVKPETVELLVEL 204

Query: 121 GADPEVEDEKGRTPLDLAREILKATPRIQLARRLGMERVIGALERVVFEYAEVEALLEKR 180
           GADPE+EDEKGRTPL LA+EILKATPR+Q  RR+G+ERVIGA+E+VV+EYAEVE LLEKR
Sbjct: 205 GADPEIEDEKGRTPLVLAKEILKATPRVQFMRRIGLERVIGAVEKVVYEYAEVEELLEKR 264

Query: 181 GKGENLEYLVKWKDGEDNEWVKVGLIAADLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL 240
           GKGENLEYLVKWKDGEDNEWVKVGLIA DLVADFEAGLEYAVAEAVVGKR GDDGKMEYL
Sbjct: 265 GKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEAGLEYAVAEAVVGKRFGDDGKMEYL 324

Query: 241 VKWTDIQDATWEPETNVDPDLVREFEDAQNNGGLGPTANVQAQLQSQAQSSN 293
           VKWTDIQDATWEP+ NVDPDL+ EFE AQ           Q Q QSQAQSSN
Sbjct: 325 VKWTDIQDATWEPQDNVDPDLIAEFEKAQ------AQPQAQPQAQSQAQSSN 370

[Close]

BLAST of Spg013652 vs. NCBI nr
Match: KAG6589032.1 (Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 497.7 bits (1280), Expect = 7.1e-137
Identity = 245/294 (83.33%), Postives = 266/294 (90.48%), Query Frame = 0


Query: 1   MEYLIKWKDGHSPSWLPSDFIARDVVAEYETPWWTAAKKADPSDLQSLIDAADGRDLNAI 60
           MEYLIKWKDGHSPSW+PSDFIA+DVVAEYETPWWTAAKKAD S L+SLIDAAD RD NA+
Sbjct: 84  MEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAV 143

Query: 61  DEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPGTVELLVQL 120
           DEDGRTALLFVAGLGSEPC+R+LAEAG +LDHRD SGGFTALHMAAGYVKPGTVELL++L
Sbjct: 144 DEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLEL 203

Query: 121 GADPEVEDEKGRTPLDLAREILKATPRIQLARRLGMERVIGALERVVFEYAEVEALLEKR 180
           GADPEV+D+KGRTPL LAREI+KATPR+Q ARRLG+ERVIGALERVVFE+AEVE LLEKR
Sbjct: 204 GADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKR 263

Query: 181 GKGENLEYLVKWKDGEDNEWVKVGLIAADLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL 240
           GKGENLEYLVKWKDGEDNEWVK  LIA DLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL
Sbjct: 264 GKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL 323

Query: 241 VKWTDIQDATWEPETNVDPDLVREFEDAQNNGGLGPTANVQAQLQSQAQSSNSG 295
           VKWTDI+DATWEPE NVD DLV EFE  Q + G GP +++      +AQSSN G
Sbjct: 324 VKWTDIEDATWEPEGNVDSDLVTEFETGQKSVGPGPISDL------EAQSSNGG 371

[Close]

BLAST of Spg013652 vs. NCBI nr
Match: XP_023529738.1 (signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 497.7 bits (1280), Expect = 7.1e-137
Identity = 246/294 (83.67%), Postives = 265/294 (90.14%), Query Frame = 0


Query: 1   MEYLIKWKDGHSPSWLPSDFIARDVVAEYETPWWTAAKKADPSDLQSLIDAADGRDLNAI 60
           MEYLIKWKDGHSPSW+PSDFIA+DVVAEYETPWWTAAKKAD S L+SLIDAAD RD NA+
Sbjct: 86  MEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAV 145

Query: 61  DEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPGTVELLVQL 120
           DED RTALLFVAGLGSEPCVR+LAEAG NLDHRD SGGFTALHMAAGYVKPGTVELL++L
Sbjct: 146 DEDSRTALLFVAGLGSEPCVRILAEAGANLDHRDKSGGFTALHMAAGYVKPGTVELLLEL 205

Query: 121 GADPEVEDEKGRTPLDLAREILKATPRIQLARRLGMERVIGALERVVFEYAEVEALLEKR 180
           GADPEV+D+KGRTPL LAREI+KATPR+Q ARRLG+ERVIGALERVVFE+AEVE LLEKR
Sbjct: 206 GADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKR 265

Query: 181 GKGENLEYLVKWKDGEDNEWVKVGLIAADLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL 240
           GKGENLEYLVKWKDGEDNEWVK  LIA DLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL
Sbjct: 266 GKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL 325

Query: 241 VKWTDIQDATWEPETNVDPDLVREFEDAQNNGGLGPTANVQAQLQSQAQSSNSG 295
           VKWTDI+DATWEPE NVD DLV EFE  Q + G GP +++      +AQSSN G
Sbjct: 326 VKWTDIEDATWEPEGNVDSDLVTEFETGQKSVGPGPISDL------EAQSSNGG 373

[Close]

BLAST of Spg013652 vs. NCBI nr
Match: XP_022928488.1 (signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 497.7 bits (1280), Expect = 7.1e-137
Identity = 245/294 (83.33%), Postives = 266/294 (90.48%), Query Frame = 0


Query: 1   MEYLIKWKDGHSPSWLPSDFIARDVVAEYETPWWTAAKKADPSDLQSLIDAADGRDLNAI 60
           MEYLIKWKDGHSPSW+PSDFIA+DVVAEYETPWWTAAKKAD S L+SLIDAAD RD NA+
Sbjct: 140 MEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAV 199

Query: 61  DEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPGTVELLVQL 120
           DEDGRTALLFVAGLGSEPC+R+LAEAG +LDHRD SGGFTALHMAAGYVKPGTVELL++L
Sbjct: 200 DEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLEL 259

Query: 121 GADPEVEDEKGRTPLDLAREILKATPRIQLARRLGMERVIGALERVVFEYAEVEALLEKR 180
           GADPEV+D+KGRTPL LAREI+KATPR+Q ARRLG+ERVIGALERVVFE+AEVE LLEKR
Sbjct: 260 GADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKR 319

Query: 181 GKGENLEYLVKWKDGEDNEWVKVGLIAADLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL 240
           GKGENLEYLVKWKDGEDNEWVK  LIA DLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL
Sbjct: 320 GKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL 379

Query: 241 VKWTDIQDATWEPETNVDPDLVREFEDAQNNGGLGPTANVQAQLQSQAQSSNSG 295
           VKWTDI+DATWEPE NVD DLV EFE  Q + G GP +++      +AQSSN G
Sbjct: 380 VKWTDIEDATWEPEGNVDSDLVTEFETGQKSVGPGPISDL------EAQSSNGG 427

[Close]

BLAST of Spg013652 vs. NCBI nr
Match: XP_022989400.1 (signal recognition particle 43 kDa protein, chloroplastic [Cucurbita maxima])

HSP 1 Score: 497.3 bits (1279), Expect = 9.2e-137
Identity = 244/294 (82.99%), Postives = 267/294 (90.82%), Query Frame = 0


Query: 1   MEYLIKWKDGHSPSWLPSDFIARDVVAEYETPWWTAAKKADPSDLQSLIDAADGRDLNAI 60
           MEYLIKWKDGHSPSW+PSDFIA+DVVAEYETPWWTAAKKAD S L+SLIDAAD RD NA+
Sbjct: 133 MEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAV 192

Query: 61  DEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPGTVELLVQL 120
           DEDGRTALLFVAGLGSEPCVR+LAEAG +LDHRD SGGFTALHMAAGYVKPGTVELL++L
Sbjct: 193 DEDGRTALLFVAGLGSEPCVRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLEL 252

Query: 121 GADPEVEDEKGRTPLDLAREILKATPRIQLARRLGMERVIGALERVVFEYAEVEALLEKR 180
           GADPEV+D+KGRTPL LAREI+KATPR+Q ARRLG+ERVIGALERVVFE+AEVE LLEKR
Sbjct: 253 GADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKR 312

Query: 181 GKGENLEYLVKWKDGEDNEWVKVGLIAADLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL 240
           GKGENLEYLVKWKDGEDNEWVK  LIA DLVADFEAGLEYAVAEAVVGKR+GDDGKMEYL
Sbjct: 313 GKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRLGDDGKMEYL 372

Query: 241 VKWTDIQDATWEPETNVDPDLVREFEDAQNNGGLGPTANVQAQLQSQAQSSNSG 295
           VKWTDI+DATWEPE NVD DL+ EFE  Q + G GP++++      +AQSSN G
Sbjct: 373 VKWTDIEDATWEPEGNVDSDLIAEFETGQKSVGPGPSSDL------EAQSSNGG 420

[Close]

BLAST of Spg013652 vs. ExPASy Swiss-Prot
Match: O22265 (Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAO PE=1 SV=2)

HSP 1 Score: 371.7 bits (953), Expect = 7.7e-102
Identity = 183/273 (67.03%), Postives = 222/273 (81.32%), Query Frame = 0


Query: 1   MEYLIKWKDGHSPSWLPSDFIARDVVAEYETPWWTAAKKADPSDLQSLIDAADGRDLNAI 60
           MEYLI+WKDGHSPSW+PS +IA DVV+EYETPWWTAA+KAD   L  L+   + RD++A+
Sbjct: 100 MEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLL---EDRDVDAV 159

Query: 61  DEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPGTVELLVQL 120
           DE+GRTALLFVAGLGS+ CVRLLAEAG +LDHRD  GG TALHMAAGYV+P  VE LV+L
Sbjct: 160 DENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL 219

Query: 121 GADPEVEDEKGRTPLDLAREILKATPR---IQLARRLGMERVIGALERVVFEYAEVEALL 180
           GAD EVEDE+G T L+LAREILK TP+   +Q  RR+G+E+VI  LE  VFEYAEV+ ++
Sbjct: 220 GADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIV 279

Query: 181 EKRGKGENLEYLVKWKDGEDNEWVKVGLIAADLVADFEAGLEYAVAEAVVGKRVGDDGK- 240
           EKRGKG+++EYLV+WKDG D EWVK   +A D+  D+E GLEYAVAE+V+GKRVGDDGK 
Sbjct: 280 EKRGKGKDVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKT 339

Query: 241 MEYLVKWTDIQDATWEPETNVDPDLVREFEDAQ 270
           +EYLVKWTD+ DATWEP+ NVD  LV  ++  Q
Sbjct: 340 IEYLVKWTDMSDATWEPQDNVDSTLVLLYQQQQ 369

[Close]

BLAST of Spg013652 vs. ExPASy Swiss-Prot
Match: Q8LSQ2 (Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0131900 PE=2 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 4.0e-82
Identity = 153/284 (53.87%), Postives = 201/284 (70.77%), Query Frame = 0


Query: 2   EYLIKWKDGHSPSWLPSDFIARDVVAEYETPWWTAAKKADPSDLQSLI-DAADGRDLNAI 61
           EYL++WKDGH PSW+P++ IA DVVAEYETPWWTAAKKAD +++ +L+ D    RD +A 
Sbjct: 97  EYLVEWKDGHEPSWIPAEAIAADVVAEYETPWWTAAKKADAAEITALLADETLRRDPDAE 156

Query: 62  DEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNS-GGFTALHMAAGYVKPGTVELLVQ 121
           D  GRTA+ F AGLGSE CVR LAEAG ++   + + GG T LH+A GY +P  V  L++
Sbjct: 157 DAQGRTAMHFAAGLGSEECVRALAEAGADVGRPERAGGGLTPLHIAVGYGRPAAVRALLE 216

Query: 122 LGADPEVEDEKGRTPLDLAREILKATPR---IQLARRLGMERVIGALERVVFEYAEVEAL 181
           LGA+PE  D +GRTPL+L +++L  TP+       RRL +E     LE+ V+E+ EVE +
Sbjct: 217 LGAEPEAPDGQGRTPLELVQDVLAKTPKGNPATFERRLALEAAAKELEKAVYEWGEVEKV 276

Query: 182 LEKRGKGENLEYLVKWKDGEDNEWVKVGLIAADLVADFEAGLEYAVAEAVVGKR--VGDD 241
           ++ RG+G+  EYLV+W+DG D EWV+   +A DLV DF+AGLEYAVAEAVV KR     +
Sbjct: 277 VDGRGEGKWREYLVEWRDGGDREWVRAAWVAEDLVKDFDAGLEYAVAEAVVNKREAAEGE 336

Query: 242 GKMEYLVKWTDIQDATWEPETNVDPDLVREFEDAQNNGGLGPTA 279
           GK EYLVKW DI++ATWEP  NVD +L++EFE  Q+    G  A
Sbjct: 337 GKWEYLVKWVDIEEATWEPAENVDAELLQEFEQRQSGVAAGGDA 380

[Close]

BLAST of Spg013652 vs. ExPASy Swiss-Prot
Match: Q9ULT8 (E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens OX=9606 GN=HECTD1 PE=1 SV=3)

HSP 1 Score: 66.2 bits (160), Expect = 6.9e-10
Identity = 36/99 (36.36%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 44  DLQSLIDAAD--GRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTA 103
           D  +LIDA D    ++N +D+ G+T L + +  G++  V  L E G +++    S   ++
Sbjct: 374 DTDALIDAIDTGAFEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNRGQRS---SS 433

Query: 104 LHMAAGYVKPGTVELLVQLGADPEVEDEKGRTPLDLARE 141
           LH AA + +P   + L++ GA+P++ DE G+TPLD ARE
Sbjct: 434 LHYAACFGRPQVAKTLLRHGANPDLRDEDGKTPLDKARE 469

[Close]

BLAST of Spg013652 vs. ExPASy Swiss-Prot
Match: Q69ZR2 (E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 9.0e-10
Identity = 36/100 (36.00%), Postives = 60/100 (60.00%), Query Frame = 0


Query: 44  DLQSLIDAAD---GRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFT 103
           D  +LIDA D     ++N +D+ G+T L + +  G++  V  L E G +++    S   +
Sbjct: 374 DTDALIDAIDTGAAFEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNRGQRS---S 433

Query: 104 ALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTPLDLARE 141
           +LH AA + +P   + L++ GA+P++ DE G+TPLD ARE
Sbjct: 434 SLHYAACFGRPQVAKTLLRHGANPDLRDEDGKTPLDKARE 470

[Close]

BLAST of Spg013652 vs. ExPASy Swiss-Prot
Match: Q9VL06 (E3 ubiquitin-protein ligase Ufd4 OS=Drosophila melanogaster OX=7227 GN=Ufd4 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.0e-09
Identity = 36/105 (34.29%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 38  KKADPSDLQSLIDAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSG 97
           +  D   L+  I++  G D+N +D+ G+T L + +  G+   V  L E G +++    S 
Sbjct: 398 RSKDSEALREAIESG-GIDVNCMDDVGQTLLNWASAFGTLEMVEYLCEKGADVNKGQRS- 457

Query: 98  GFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTPLDLAREIL 143
             ++LH AA + +P   ++L++ GA P++ DE G+TPLD ARE L
Sbjct: 458 --SSLHYAACFGRPAIAKILLKFGAYPDLRDEDGKTPLDKARERL 498

[Close]

BLAST of Spg013652 vs. ExPASy TrEMBL
Match: A0A6J1EP65 (signal recognition particle 43 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111435281 PE=4 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.4e-137
Identity = 245/294 (83.33%), Postives = 266/294 (90.48%), Query Frame = 0


Query: 1   MEYLIKWKDGHSPSWLPSDFIARDVVAEYETPWWTAAKKADPSDLQSLIDAADGRDLNAI 60
           MEYLIKWKDGHSPSW+PSDFIA+DVVAEYETPWWTAAKKAD S L+SLIDAAD RD NA+
Sbjct: 140 MEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAV 199

Query: 61  DEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPGTVELLVQL 120
           DEDGRTALLFVAGLGSEPC+R+LAEAG +LDHRD SGGFTALHMAAGYVKPGTVELL++L
Sbjct: 200 DEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLEL 259

Query: 121 GADPEVEDEKGRTPLDLAREILKATPRIQLARRLGMERVIGALERVVFEYAEVEALLEKR 180
           GADPEV+D+KGRTPL LAREI+KATPR+Q ARRLG+ERVIGALERVVFE+AEVE LLEKR
Sbjct: 260 GADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKR 319

Query: 181 GKGENLEYLVKWKDGEDNEWVKVGLIAADLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL 240
           GKGENLEYLVKWKDGEDNEWVK  LIA DLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL
Sbjct: 320 GKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL 379

Query: 241 VKWTDIQDATWEPETNVDPDLVREFEDAQNNGGLGPTANVQAQLQSQAQSSNSG 295
           VKWTDI+DATWEPE NVD DLV EFE  Q + G GP +++      +AQSSN G
Sbjct: 380 VKWTDIEDATWEPEGNVDSDLVTEFETGQKSVGPGPISDL------EAQSSNGG 427

[Close]

BLAST of Spg013652 vs. ExPASy TrEMBL
Match: A0A6J1JM92 (signal recognition particle 43 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486468 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 4.5e-137
Identity = 244/294 (82.99%), Postives = 267/294 (90.82%), Query Frame = 0


Query: 1   MEYLIKWKDGHSPSWLPSDFIARDVVAEYETPWWTAAKKADPSDLQSLIDAADGRDLNAI 60
           MEYLIKWKDGHSPSW+PSDFIA+DVVAEYETPWWTAAKKAD S L+SLIDAAD RD NA+
Sbjct: 133 MEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAV 192

Query: 61  DEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPGTVELLVQL 120
           DEDGRTALLFVAGLGSEPCVR+LAEAG +LDHRD SGGFTALHMAAGYVKPGTVELL++L
Sbjct: 193 DEDGRTALLFVAGLGSEPCVRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLEL 252

Query: 121 GADPEVEDEKGRTPLDLAREILKATPRIQLARRLGMERVIGALERVVFEYAEVEALLEKR 180
           GADPEV+D+KGRTPL LAREI+KATPR+Q ARRLG+ERVIGALERVVFE+AEVE LLEKR
Sbjct: 253 GADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKR 312

Query: 181 GKGENLEYLVKWKDGEDNEWVKVGLIAADLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL 240
           GKGENLEYLVKWKDGEDNEWVK  LIA DLVADFEAGLEYAVAEAVVGKR+GDDGKMEYL
Sbjct: 313 GKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRLGDDGKMEYL 372

Query: 241 VKWTDIQDATWEPETNVDPDLVREFEDAQNNGGLGPTANVQAQLQSQAQSSNSG 295
           VKWTDI+DATWEPE NVD DL+ EFE  Q + G GP++++      +AQSSN G
Sbjct: 373 VKWTDIEDATWEPEGNVDSDLIAEFETGQKSVGPGPSSDL------EAQSSNGG 420

[Close]

BLAST of Spg013652 vs. ExPASy TrEMBL
Match: A0A6J1C248 (signal recognition particle 43 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007575 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.2e-134
Identity = 238/277 (85.92%), Postives = 256/277 (92.42%), Query Frame = 0


Query: 1   MEYLIKWKDGHSPSWLPSDFIARDVVAEYETPWWTAAKKADPSDLQSLIDAADGRDLNAI 60
           MEYLI WKDGH+PSW+PSDFIARDVVAEYETPWWTAAKKAD S L+SLIDAADGRDL+A+
Sbjct: 85  MEYLIAWKDGHAPSWVPSDFIARDVVAEYETPWWTAAKKADESALKSLIDAADGRDLDAV 144

Query: 61  DEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPGTVELLVQL 120
           DEDGRTALLFVAGLGSE CVR+LAE G N+DHRDNSGGFTALHMAAGYVKPG VE L+ L
Sbjct: 145 DEDGRTALLFVAGLGSEACVRMLAEGGANVDHRDNSGGFTALHMAAGYVKPGAVEQLLDL 204

Query: 121 GADPEVEDEKGRTPLDLAREILKATPRIQLARRLGMERVIGALERVVFEYAEVEALLEKR 180
           GA PEVEDEKGRT L+LAREILKATPRIQ  RR+G+ERV+GALE+ VFEYAEVEALLEKR
Sbjct: 205 GAYPEVEDEKGRTALELAREILKATPRIQFGRRMGLERVVGALEKAVFEYAEVEALLEKR 264

Query: 181 GKGENLEYLVKWKDGEDNEWVKVGLIAADLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL 240
           GKGENLEYLVKWKDGEDNEWVK GLIAADLVADFEAGLEYAVAEAV GKR+GDDGKMEYL
Sbjct: 265 GKGENLEYLVKWKDGEDNEWVKAGLIAADLVADFEAGLEYAVAEAVAGKRMGDDGKMEYL 324

Query: 241 VKWTDIQDATWEPETNVDPDLVREFEDAQ---NNGGL 275
           VKWTDI+DATWEP  NVDPDL++EFEDAQ   +NGGL
Sbjct: 325 VKWTDIEDATWEPLDNVDPDLIKEFEDAQAQSSNGGL 361

[Close]

BLAST of Spg013652 vs. ExPASy TrEMBL
Match: A0A1S3BHX6 (signal recognition particle 43 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490246 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 2.2e-131
Identity = 233/279 (83.51%), Postives = 256/279 (91.76%), Query Frame = 0


Query: 1   MEYLIKWKDGHSPSWLPSDFIARDVVAEYETPWWTAAKKADPSDLQSLIDAADGRDLNAI 60
           MEYLIKWKDGHSPSW+PSDFIA+DVVAEYETPWWTAAKKAD S L+SLID+ D RD +A+
Sbjct: 85  MEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADKSALESLIDSGDERDFDAV 144

Query: 61  DEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPGTVELLVQL 120
           DEDGRTALLFV+GLGS  CVR+LAEAGVNL+HRDNSGGFTALHMAAGYVKP TVELLV+L
Sbjct: 145 DEDGRTALLFVSGLGSVECVRILAEAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVEL 204

Query: 121 GADPEVEDEKGRTPLDLAREILKATPRIQLARRLGMERVIGALERVVFEYAEVEALLEKR 180
           GADPE+EDEKGRT L+LA+EILKATPR+Q  RRLG+E+VIGA+E+VV+EYAEVE LLEKR
Sbjct: 205 GADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKR 264

Query: 181 GKGENLEYLVKWKDGEDNEWVKVGLIAADLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL 240
           GKGENLEYLVKWKDGEDNEWVKVGLIA DLVAD+EAGLEYAVAEAVVGKRVGD+GKMEYL
Sbjct: 265 GKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADYEAGLEYAVAEAVVGKRVGDEGKMEYL 324

Query: 241 VKWTDIQDATWEPETNVDPDLVREFEDAQNNG-GLGPTA 279
           VKWTDIQDATWEP  NVDPDL+ EFE AQ     L PT+
Sbjct: 325 VKWTDIQDATWEPLDNVDPDLINEFEKAQAQAQTLNPTS 363

[Close]

BLAST of Spg013652 vs. ExPASy TrEMBL
Match: A0A0A0K634 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018780 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.2e-129
Identity = 227/269 (84.39%), Postives = 250/269 (92.94%), Query Frame = 0


Query: 1   MEYLIKWKDGHSPSWLPSDFIARDVVAEYETPWWTAAKKADPSDLQSLIDAADGRDLNAI 60
           MEYLIKWKDGHSPSW+PSDFIA+DVVAEYETPWWTAAKKAD S L+SLID+ D RD +A+
Sbjct: 81  MEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAV 140

Query: 61  DEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPGTVELLVQL 120
           DEDGRTALLFV+GLGS  CVR+LA+AGVNL+HRDNSGGFTALHMAAGYVKP TVELLV+L
Sbjct: 141 DEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVEL 200

Query: 121 GADPEVEDEKGRTPLDLAREILKATPRIQLARRLGMERVIGALERVVFEYAEVEALLEKR 180
           GADPE++DEKGRT L+LA+EILKATPR+Q  RRLG+E+VI A+E+VV+EYAEVE LLEKR
Sbjct: 201 GADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVEELLEKR 260

Query: 181 GKGENLEYLVKWKDGEDNEWVKVGLIAADLVADFEAGLEYAVAEAVVGKRVGDDGKMEYL 240
           GKGENLEYLVKWKDGEDNEWVKVGLIA DLV D+EAGLEYAVAEAVVGKRVGDDGKMEYL
Sbjct: 261 GKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEYAVAEAVVGKRVGDDGKMEYL 320

Query: 241 VKWTDIQDATWEPETNVDPDLVREFEDAQ 270
           VKWTDIQDATWEP  NVDPDL+ EFE AQ
Sbjct: 321 VKWTDIQDATWEPLDNVDPDLINEFEKAQ 349

[Close]

BLAST of Spg013652 vs. TAIR 10
Match: AT2G47450.1 (chloroplast signal recognition particle component (CAO) )

HSP 1 Score: 371.7 bits (953), Expect = 5.5e-103
Identity = 183/273 (67.03%), Postives = 222/273 (81.32%), Query Frame = 0


Query: 1   MEYLIKWKDGHSPSWLPSDFIARDVVAEYETPWWTAAKKADPSDLQSLIDAADGRDLNAI 60
           MEYLI+WKDGHSPSW+PS +IA DVV+EYETPWWTAA+KAD   L  L+   + RD++A+
Sbjct: 100 MEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLL---EDRDVDAV 159

Query: 61  DEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPGTVELLVQL 120
           DE+GRTALLFVAGLGS+ CVRLLAEAG +LDHRD  GG TALHMAAGYV+P  VE LV+L
Sbjct: 160 DENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL 219

Query: 121 GADPEVEDEKGRTPLDLAREILKATPR---IQLARRLGMERVIGALERVVFEYAEVEALL 180
           GAD EVEDE+G T L+LAREILK TP+   +Q  RR+G+E+VI  LE  VFEYAEV+ ++
Sbjct: 220 GADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIV 279

Query: 181 EKRGKGENLEYLVKWKDGEDNEWVKVGLIAADLVADFEAGLEYAVAEAVVGKRVGDDGK- 240
           EKRGKG+++EYLV+WKDG D EWVK   +A D+  D+E GLEYAVAE+V+GKRVGDDGK 
Sbjct: 280 EKRGKGKDVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKT 339

Query: 241 MEYLVKWTDIQDATWEPETNVDPDLVREFEDAQ 270
           +EYLVKWTD+ DATWEP+ NVD  LV  ++  Q
Sbjct: 340 IEYLVKWTDMSDATWEPQDNVDSTLVLLYQQQQ 369

[Close]

BLAST of Spg013652 vs. TAIR 10
Match: AT5G09410.1 (ethylene induced calmodulin binding protein )

HSP 1 Score: 62.8 bits (151), Expect = 5.4e-10
Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 53  DGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPG 112
           +G+  N +DEDG+  L FVA LG +  ++ +  AGVN++ RD + G++ALH AA   +  
Sbjct: 584 EGKGPNILDEDGQGILHFVAALGYDWAIKPVLAAGVNINFRD-ANGWSALHWAAFSGREE 643

Query: 113 TVELLVQLGA------DPEVEDEKGRTPLDLA 139
           TV +LV LGA      DP  E   G+T  DLA
Sbjct: 644 TVAVLVSLGADAGALTDPSPELPLGKTAADLA 674

[Close]

BLAST of Spg013652 vs. TAIR 10
Match: AT5G09410.2 (ethylene induced calmodulin binding protein )

HSP 1 Score: 62.8 bits (151), Expect = 5.4e-10
Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 53  DGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPG 112
           +G+  N +DEDG+  L FVA LG +  ++ +  AGVN++ RD + G++ALH AA   +  
Sbjct: 602 EGKGPNILDEDGQGILHFVAALGYDWAIKPVLAAGVNINFRD-ANGWSALHWAAFSGREE 661

Query: 113 TVELLVQLGA------DPEVEDEKGRTPLDLA 139
           TV +LV LGA      DP  E   G+T  DLA
Sbjct: 662 TVAVLVSLGADAGALTDPSPELPLGKTAADLA 692

[Close]

BLAST of Spg013652 vs. TAIR 10
Match: AT5G09410.3 (ethylene induced calmodulin binding protein )

HSP 1 Score: 62.8 bits (151), Expect = 5.4e-10
Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 53  DGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPG 112
           +G+  N +DEDG+  L FVA LG +  ++ +  AGVN++ RD + G++ALH AA   +  
Sbjct: 661 EGKGPNILDEDGQGILHFVAALGYDWAIKPVLAAGVNINFRD-ANGWSALHWAAFSGREE 720

Query: 113 TVELLVQLGA------DPEVEDEKGRTPLDLA 139
           TV +LV LGA      DP  E   G+T  DLA
Sbjct: 721 TVAVLVSLGADAGALTDPSPELPLGKTAADLA 751

[Close]

BLAST of Spg013652 vs. TAIR 10
Match: AT2G17390.1 (ankyrin repeat-containing 2B )

HSP 1 Score: 59.3 bits (142), Expect = 6.0e-09
Identity = 37/101 (36.63%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 40  ADPSDLQSLIDA-ADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGG 99
           A   D++ L  A A G + +  D +GRTAL F  G G   C ++L +AG N +  D +  
Sbjct: 228 ASLGDVEGLKAALASGGNKDEEDSEGRTALHFACGYGEVRCAQVLLDAGANANAIDKNKN 287

Query: 100 FTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTPLDLAR 140
            T LH AAGY +   V LL++ GA    ++   + P+D+AR
Sbjct: 288 -TPLHYAAGYGRKECVSLLLENGAAVTQQNMDNKNPIDVAR 327

The following BLAST results are available for this feature:

BLAST of Spg013652 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888741.1	1.9e-137	84.25	signal recognition particle 43 kDa protein, chloroplastic [Benincasa hispida]	[more]
KAG6589032.1	7.1e-137	83.33	Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita ar...	[more]
XP_023529738.1	7.1e-137	83.67	signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita pepo s...	[more]
XP_022928488.1	7.1e-137	83.33	signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita moscha...	[more]
XP_022989400.1	9.2e-137	82.99	signal recognition particle 43 kDa protein, chloroplastic [Cucurbita maxima]	[more]

BLAST of Spg013652 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22265	7.7e-102	67.03	Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thalian...	[more]
Q8LSQ2	4.0e-82	53.87	Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sati...	[more]
Q9ULT8	6.9e-10	36.36	E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens OX=9606 GN=HECTD1 PE=1 SV=3	[more]
Q69ZR2	9.0e-10	36.00	E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=2	[more]
Q9VL06	2.0e-09	34.29	E3 ubiquitin-protein ligase Ufd4 OS=Drosophila melanogaster OX=7227 GN=Ufd4 PE=2...	[more]

BLAST of Spg013652 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EP65	3.4e-137	83.33	signal recognition particle 43 kDa protein, chloroplastic-like OS=Cucurbita mosc...	[more]
A0A6J1JM92	4.5e-137	82.99	signal recognition particle 43 kDa protein, chloroplastic OS=Cucurbita maxima OX...	[more]
A0A6J1C248	1.2e-134	85.92	signal recognition particle 43 kDa protein, chloroplastic OS=Momordica charantia...	[more]
A0A1S3BHX6	2.2e-131	83.51	signal recognition particle 43 kDa protein, chloroplastic OS=Cucumis melo OX=365...	[more]
A0A0A0K634	1.2e-129	84.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018780 PE=4 SV=1	[more]

BLAST of Spg013652 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47450.1	5.5e-103	67.03	chloroplast signal recognition particle component (CAO)	[more]
AT5G09410.1	5.4e-10	42.39	ethylene induced calmodulin binding protein	[more]
AT5G09410.2	5.4e-10	42.39	ethylene induced calmodulin binding protein	[more]
AT5G09410.3	5.4e-10	42.39	ethylene induced calmodulin binding protein	[more]
AT2G17390.1	6.0e-09	36.63	ankyrin repeat-containing 2B	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 97..126 e-value: 0.0044 score: 26.2 coord: 63..92 e-value: 8.6 score: 15.3
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 63..95 score: 10.04513
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 97..129 score: 11.16695
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 169..219 e-value: 1.3E-7 score: 41.3 coord: 220..270 e-value: 3.6E-8 score: 43.2
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 171..200 score: 8.557401
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 221..257 score: 11.3086
None	No IPR available	GENE3D	2.40.50.40		coord: 217..269 e-value: 2.3E-26 score: 93.1
None	No IPR available	GENE3D	2.40.50.40		coord: 167..216 e-value: 2.5E-18 score: 67.3 coord: 1..27 e-value: 3.0E-10 score: 41.4
None	No IPR available	PFAM	PF13857	Ank_5	coord: 83..138 e-value: 9.9E-10 score: 38.5
None	No IPR available	PANTHER	PTHR24128	HOMEOBOX PROTEIN WARIAI	coord: 1..281
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 97..129 score: 9.807884
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 63..95 score: 8.693567
None	No IPR available	CDD	cd18628	CD3_cpSRP43_like	coord: 218..266 e-value: 1.37126E-10 score: 53.9244
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 28..166 e-value: 2.3E-35 score: 123.1
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 28..140
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 223..267 e-value: 2.7E-8 score: 33.6
IPR030300	Signal recognition particle 43kDa protein	PANTHER	PTHR24128:SF43	SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC	coord: 1..281
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 2..33
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 219..268
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 169..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg013652.1	Spg013652.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070208	protein heterotrimerization
biological_process	GO:0045038	protein import into chloroplast thylakoid membrane
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0080085	signal recognition particle, chloroplast targeting
molecular_function	GO:0097718	disordered domain specific binding
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0030674	protein-macromolecule adaptor activity
molecular_function	GO:0005515	protein binding