Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTGATCAAAAATATGGAAAAGATTATTAGGGACTTTATATGGAATGGTGGCAATTTCAAGCCTGTTTGTAATCTTGTTAGATGGGATTGGGCGGCTTTGCCCACATCTCATGGAGGCATAGGAGTGGGCACTTTAGATCTTCGCAATCAGACCCTCCTAACTAAATGGCTTTGGAGATTTGTCCATGAGGAAAATGCCACCTGGAGAAAAGTCATTAGCAGCATTTATGGGATTGATAACTTTGGGTGGAGAACTACTGAGATTAAAAAAGGTAGAAGCAGTAGAATTTGGCCAGATATTCAAAGGAACCAGCAAAGCTTTGAGGAGTTTTCCAAGTTCCAAGTTAGTTGTGGCAGCCCAGACCTTTTTGATGTTTCCTACAAGAAGAATGCCTCTATTAAGGATTGTTGGGATGATAGCAATCAAACTTGGAATCTTGGCTTGCATAGGGGGCTGTTTGATCGGGAGCTGAGCAATTGGGCTGCCTTAACAGAGATGCTGGAAAACATCCAGCTGGGAAATCAGGAGGACAAAATCTTGTGGAAACTGGAGCCCTCGGGTGCTTTTTCCTGTAAATCTATGGTGCGGAAATCGATTAATATATCCCCTAATATTTGTAAGTCTCTAGTTGGGCAAATCTGGAAGCACAAAACCCCTAAAAAGGTGAAAGTATTCCTCTGGTCTGTGGCTTATAGGAGCCTGAAAACGGATGACAAAGTGCAAAGAAAGCTGAGGAATTGGTGCCTTTCTCCTTCAAGTTGTAGGCTTTGCCTGATGGATTGTGAAAGTATAGACCATTTATTCCTTCACTGTGTGTTTGCTCAGAAGCCTTGGAACTTGATTGGTGGCTTACTGGGGCTTTCTTTTTGTGTGCCGAGAAGGGTCGAGGACTGGCGCTGAAGGCTTGATCGCTTGGAACTTAAAGAATAAGGCTAAGGTGATTGGTGGATGCGCGTTTAGAGCGACCATGTGGCTTTTGTGGAAGGAGAGGAACGCTAGAACCTTCGACGATAAATCGTCTTCTTTTGAGCTCTTTGCTAGTTCTGTAAAGAATATTGCTTCTTGGTGGATCTCCTCACATAAGAAGATTTTTTTGTAATTATAGCTTACTTATGATTATTAGTGATTATTAGTGATTGGCAGGCTCTTTTGAGATAGTTTCTTGGGCGGGGCGATCTCCACCCCGGCCCCTAGGTTGTCAATTCTTTTTTGTGATTAATACATATCTTTTGAATGTTTCCTATAAAAAAAAAAAATATATTAGAGTTTAGGCTAGGTACAAAATAGTTGAAAAATAGTGAGTAAAAATGGTTTATTTCGTAATTTATTATGACTCGAGAAGATAATATATACTCCCATTCTGAGGCTATGCCGCTATGGGAAATTATAGAAAGCCTCTCGAAGACAACGAGAAAAGCAAACAAGTTCTTGTTGTGCATACAAATTTCCCAGTAAAATTCTAAAGAAGTGTCCTAAAGGAAGGATGAATTTTACAAAACTTTATAAATGATAGAATTGGGGGGTGGGGTCCTAAAGTAAGCCATCCGCCACTGTGAAGCATTATTAGATTGCAGTCTCATTTACCACACAAAAGCACACGTTATATTCTATTCACAAACAATTTGCAACTTAACTTAGGTTATTTTGGCTGTAAGATTTCCATATTTTGTGAAGTGGAATCAACCTAGTGGCATCTATGAGGAAGGTGACACAAAGGAGGCTCAAGTGCTTGTTAAGGGTGGTGGCAAAGGCTGA
mRNA sequence
ATGAAGGTGATCAAAAATATGGAAAAGATTATTAGGGACTTTATATGGAATGGTGGCAATTTCAAGCCTGTTTGTAATCTTGTTAGATGGGATTGGGCGGCTTTGCCCACATCTCATGGAGGCATAGGAGTGGGCACTTTAGATCTTCGCAATCAGACCCTCCTAACTAAATGGCTTTGGAGATTTGTCCATGAGGAAAATGCCACCTGGAGAAAAGTCATTAGCAGCATTTATGGGATTGATAACTTTGGGTGGAGAACTACTGAGATTAAAAAAGGTAGAAGCAGTAGAATTTGGCCAGATATTCAAAGGAACCAGCAAAGCTTTGAGGAGTTTTCCAAGTTCCAAGTTAGTTGTGGCAGCCCAGACCTTTTTGATGTTTCCTACAAGAAGAATGCCTCTATTAAGGATTGTTGGGATGATAGCAATCAAACTTGGAATCTTGGCTTGCATAGGGGGCTGTTTGATCGGGAGCTGAGCAATTGGGCTGCCTTAACAGAGATGCTGGAAAACATCCAGCTGGGAAATCAGGAGGACAAAATCTTGTGGAAACTGGAGCCCTCGGGTGCTTTTTCCTGTAAATCTATGGTGCGGAAATCGATTAATATATCCCCTAATATTTGTAAGTCTCTAGTTGGGCAAATCTGGAAGCACAAAACCCCTAAAAAGGTGAAAGTATTCCTCTGGTCTGTGGCTTATAGGAGCCTGAAAACGGATGACAAAGTGCAAAGAAAGCTGAGGAATTGGTGCCTTTCTCCTTCAAGTTGTAGGCTTTGCCTGATGGATTGTGAAAAAGGGTCGAGGACTGGCGCTGAAGGCTTGATCGCTTGGAACTTAAAGAATAAGGCTAAGGTGATTGGTGGATGCGCGTTTAGAGCGACCATGTGGCTTTTGTGGAAGGAGAGGAACGCTAGAACCTTCGACGATAAATCGTCTTCTTTTGAGCTCTTTGCTAGTTCTGTAAAGAATATTGCTTCTTGA
Coding sequence (CDS)
ATGAAGGTGATCAAAAATATGGAAAAGATTATTAGGGACTTTATATGGAATGGTGGCAATTTCAAGCCTGTTTGTAATCTTGTTAGATGGGATTGGGCGGCTTTGCCCACATCTCATGGAGGCATAGGAGTGGGCACTTTAGATCTTCGCAATCAGACCCTCCTAACTAAATGGCTTTGGAGATTTGTCCATGAGGAAAATGCCACCTGGAGAAAAGTCATTAGCAGCATTTATGGGATTGATAACTTTGGGTGGAGAACTACTGAGATTAAAAAAGGTAGAAGCAGTAGAATTTGGCCAGATATTCAAAGGAACCAGCAAAGCTTTGAGGAGTTTTCCAAGTTCCAAGTTAGTTGTGGCAGCCCAGACCTTTTTGATGTTTCCTACAAGAAGAATGCCTCTATTAAGGATTGTTGGGATGATAGCAATCAAACTTGGAATCTTGGCTTGCATAGGGGGCTGTTTGATCGGGAGCTGAGCAATTGGGCTGCCTTAACAGAGATGCTGGAAAACATCCAGCTGGGAAATCAGGAGGACAAAATCTTGTGGAAACTGGAGCCCTCGGGTGCTTTTTCCTGTAAATCTATGGTGCGGAAATCGATTAATATATCCCCTAATATTTGTAAGTCTCTAGTTGGGCAAATCTGGAAGCACAAAACCCCTAAAAAGGTGAAAGTATTCCTCTGGTCTGTGGCTTATAGGAGCCTGAAAACGGATGACAAAGTGCAAAGAAAGCTGAGGAATTGGTGCCTTTCTCCTTCAAGTTGTAGGCTTTGCCTGATGGATTGTGAAAAAGGGTCGAGGACTGGCGCTGAAGGCTTGATCGCTTGGAACTTAAAGAATAAGGCTAAGGTGATTGGTGGATGCGCGTTTAGAGCGACCATGTGGCTTTTGTGGAAGGAGAGGAACGCTAGAACCTTCGACGATAAATCGTCTTCTTTTGAGCTCTTTGCTAGTTCTGTAAAGAATATTGCTTCTTGA
Protein sequence
MKVIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRFVHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCGSPDLFDVSYKKNASIKDCWDDSNQTWNLGLHRGLFDRELSNWAALTEMLENIQLGNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKHKTPKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLCLMDCEKGSRTGAEGLIAWNLKNKAKVIGGCAFRATMWLLWKERNARTFDDKSSSFELFASSVKNIAS
Homology
BLAST of Spg013566 vs. NCBI nr
Match:
VVA39726.1 (Hypothetical predicted protein, partial [Prunus dulcis])
HSP 1 Score: 187.6 bits (475), Expect = 1.7e-43
Identity = 119/360 (33.06%), Postives = 165/360 (45.83%), Query Frame = 0
Query: 3 VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
V +EK++RDF+W G + K + V W+ GG+GVG+L R+ L KWLWRF
Sbjct: 630 VANRIEKLMRDFLWEGLDGKR-NHAVSWEVVGKAKFCGGLGVGSLRARSAVLRAKWLWRF 689
Query: 63 VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCG-- 122
+E +A W KVI SIYG+D GW +G W DI F F V CG
Sbjct: 690 PNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRSPWRDISSGYNLFLRGCVFVVGCGVR 749
Query: 123 -----------------SPDLFDVSYKKNASIKD--CWDDSNQTWNLGLHRGLFDRELSN 182
P LF++S K+N +I D +W+ G R L + E++
Sbjct: 750 VRFWEDDWSQGGVLKEVFPRLFNLSRKQNHNISSFTSSDGLPLSWDFGFRRNLNELEITE 809
Query: 183 WAALTEMLENIQL-GNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKHKT 242
A L ++LE ++L ++ DK +WKL+PSG F+C S+ N QIWK KT
Sbjct: 810 VARLLDLLEGVRLFTSRLDKRIWKLDPSGLFTCHSLCSHIQNCGEGEIFPPYTQIWKAKT 869
Query: 243 PKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLC----------LMDCEKGSRTG 302
P KVK+F+W L T D +QR+ C+SP C LC L+ C +
Sbjct: 870 PLKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGDSVDHLLLHCPFSLKLW 929
Query: 303 -------------AEG--------LIAWNLKNKAKVIGGCAFRATMWLLWKERNARTFDD 310
EG + A KAK++ G +A +W LW ERN R F+D
Sbjct: 930 ETLLQEVNTVWVIPEGCFELFSIRIDALGRGKKAKILWGSLMQAVVWNLWLERNRRIFED 988
BLAST of Spg013566 vs. NCBI nr
Match:
XP_020420593.1 (uncharacterized protein LOC18774736 [Prunus persica])
HSP 1 Score: 186.4 bits (472), Expect = 3.9e-43
Identity = 116/358 (32.40%), Postives = 165/358 (46.09%), Query Frame = 0
Query: 3 VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
V +EK++RDF+W G + K + V W+ +GG+GVG+L R+ L KWLWRF
Sbjct: 659 VANRIEKLMRDFLWEGLDGKR-NHAVSWEVVGKAKFYGGLGVGSLRARSAALRAKWLWRF 718
Query: 63 VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCG-- 122
+E +A W KVI SIYG+D GW +G +W DI F + F+V CG
Sbjct: 719 PNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRSLWRDISSGYNLFLQGCVFEVGCGVR 778
Query: 123 ---------------SPDLFDVSYKKNASIKDC--WDDSNQTWNLGLHRGLFDRELSNWA 182
P LF++S K+N +I D +W+ R L + E++ A
Sbjct: 779 VRFWEDDWSGVVLEVFPRLFNLSRKQNHNISSFTGLDGFPLSWDFSFRRNLNELEITEAA 838
Query: 183 ALTEMLENIQ-LGNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKHKTPK 242
L ++LE ++ + ++ DK WKL+P G F+C S N S QIWK KTP
Sbjct: 839 RLLDLLEGVRVITSRLDKRRWKLDPFGLFTCHSFCSHIQNRDEREIFSPYTQIWKAKTPP 898
Query: 243 KVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLC----------LMDCEKGSRTG-- 302
KVK+F+W L T D +QR+ C+SP C LC L+ C +
Sbjct: 899 KVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGQSVDHLLIHCPFSLKLWET 958
Query: 303 -----------AEGLI--------AWNLKNKAKVIGGCAFRATMWLLWKERNARTFDD 310
EG A KAK++ G +A +W LW ER+ R F+D
Sbjct: 959 LLKEVNTVWVIPEGCFELFSIRFDALGRGKKAKILWGSLMQAVVWNLWMERSRRIFED 1015
BLAST of Spg013566 vs. NCBI nr
Match:
TQD93576.1 (hypothetical protein C1H46_020784 [Malus baccata])
HSP 1 Score: 184.9 bits (468), Expect = 1.1e-42
Identity = 120/362 (33.15%), Postives = 162/362 (44.75%), Query Frame = 0
Query: 3 VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
VI +EK+++ F+W G +LV+W+ GG+GVG L RN+ LL KWLWRF
Sbjct: 109 VIGRLEKLMKGFLWEGVEEGKKNHLVKWEIVIKSKEEGGLGVGNLRNRNEALLAKWLWRF 168
Query: 63 VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCGS- 122
E ++ W KVI S YG+ N GW +G S W DI Q F KF+V G
Sbjct: 169 PKEPHSLWHKVIRSKYGLQNNGWNAFPPMRGSSRSPWKDISSGSQLFLHCCKFEVGNGER 228
Query: 123 ------------------PDLFDVSYKKNASIKDCWDDSNQ--TWNLGLHRGLFDRELSN 182
P LF +S N +I D S +WN R L + E+
Sbjct: 229 VRFWEDGWLEGGPLKEQFPRLFLLSRMHNQNISSFADFSTNSLSWNFDFRRNLNEAEIEE 288
Query: 183 WAALTEMLENIQLG-NQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSL--VGQIWKH 242
A L + +E ++L ++ D WKLE S F+CKS +S + I + QIWK
Sbjct: 289 AARLLQKVEEVRLSQSRTDNRRWKLEASRLFTCKSY--RSFLSNNGIMQYFPPYSQIWKS 348
Query: 243 KTPKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLC----------LMDCE---- 302
K P KVK+ +W VA L T D++QR+ CLSP C LC + C
Sbjct: 349 KVPPKVKILVWLVAKGKLNTCDQIQRRSHFICLSPHWCSLCKAKEESVNHIFLHCSYTIQ 408
Query: 303 ---------KGSRTGAEGLI--------AWNLKNKAKVIGGCAFRATMWLLWKERNARTF 310
+ S +G A + KAKV+ GC A W +W ERN R F
Sbjct: 409 LWWKLFQEVRASWVIPKGCFELLSTKFQALGIGRKAKVLWGCLVSAVFWNIWLERNKRIF 468
BLAST of Spg013566 vs. NCBI nr
Match:
KAB2623078.1 (ribonuclease H protein [Pyrus ussuriensis x Pyrus communis])
HSP 1 Score: 184.9 bits (468), Expect = 1.1e-42
Identity = 119/362 (32.87%), Postives = 166/362 (45.86%), Query Frame = 0
Query: 3 VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
VI +EK+++ F+W G +LV+W+ GG+GVG L +N+ LL KWLWRF
Sbjct: 43 VIGRLEKLMKGFLWEGVEEGKKNHLVKWEIVIKSKEEGGLGVGNLRNQNEALLAKWLWRF 102
Query: 63 VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCGS- 122
E N+ W KVI + YG+ + GW +G S W DI QSF + KF+V G
Sbjct: 103 PKEPNSLWHKVIRTKYGLQDNGWNANPPVRGSSRSPWKDISCGLQSFLQCCKFKVGNGER 162
Query: 123 ------------------PDLFDVSYKKNASIKDCWDDSNQ--TWNLGLHRGLFDRELSN 182
P LF +S + N +I D S +WN R L + E+
Sbjct: 163 VKCWEDGWLEGGPLKEQFPRLFLLSRRHNQNIASFVDLSINFLSWNFDFRRNLNEVEIEE 222
Query: 183 WAALTEMLENIQLG-NQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSL--VGQIWKH 242
A L + +EN++L ++ D WKL+ SG F+CKS +S + I + QIWK
Sbjct: 223 AARLLQKVENVRLSQSRADDRRWKLDLSGLFTCKSY--RSFLSNNGIVQHFPPSSQIWKS 282
Query: 243 KTPKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLCLMDCEKGS----------- 302
K P KVKV +W VA L T D++QR+ C+SP C LC E +
Sbjct: 283 KVPPKVKVLVWLVAIGRLNTCDQIQRRSPFICISPHWCSLCKAKEESVNHIFLHCSYTIQ 342
Query: 303 ---RTGAEGLIAW-----------------NLKNKAKVIGGCAFRATMWLLWKERNARTF 310
+ E ++W + KAK + GC A W +W ERN R F
Sbjct: 343 LWWKLFQEVRVSWVIPKGCFELLSTNFEALGIGRKAKALWGCLVSAVFWNIWLERNKRIF 402
BLAST of Spg013566 vs. NCBI nr
Match:
BBN69274.1 (TatD related DNase [Prunus dulcis])
HSP 1 Score: 182.2 bits (461), Expect = 7.3e-42
Identity = 112/364 (30.77%), Postives = 168/364 (46.15%), Query Frame = 0
Query: 3 VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
V +E+++R+F+W G C+LVRW GG+G+G+L RN+ L KWLWRF
Sbjct: 573 VTAKVEQLMRNFLWEGVEEGKNCHLVRWVRVTKSKEEGGLGIGSLRERNEALRAKWLWRF 632
Query: 63 VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCGS- 122
E N+ W ++I S YG+D+ GW T +I K W +I + SF + +F V G
Sbjct: 633 PLETNSLWHRIIKSKYGLDSNGWDTKQIDKVSCRNPWREISKGYISFLQCCRFSVGNGEK 692
Query: 123 ------------------PDLFDVSYKKNASIKDCWDDSNQ----TWNLGLHRGLFDREL 182
P L+ +S +KN I W +N W+ R L + E+
Sbjct: 693 IRFWEDFWLKEGILKDLFPRLYSLSRRKNQCI--AWFANNHEMPLNWDFDFRRNLSEAEI 752
Query: 183 SNWAALTEMLENIQL-GNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKH 242
+ L ++L N++L G++ D+ W++E G+FSCKS R + + ++ IWK
Sbjct: 753 AEVVLLLDILGNVRLFGSRPDRRSWEIEEQGSFSCKSF-RSFLISTTSVVFPPYRSIWKA 812
Query: 243 KTPKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLCLMDCEKGSR---------- 302
KTP K++ F+W A + T D +QR+ CLSPS C C + E
Sbjct: 813 KTPPKIQFFVWLAANGRINTCDCIQRRQPKMCLSPSWCVFCKENAENIDHLFIHCSYSLK 872
Query: 303 --------TGAE--------GLIAWNLK-----NKAKVIGGCAFRATMWLLWKERNARTF 312
GAE L++ NL+ KA ++ C A W +W ERN R F
Sbjct: 873 LWWRMLDALGAEWVIPKGCFELLSINLRISGKGKKAGILRDCLIHAIFWNIWMERNRRIF 932
BLAST of Spg013566 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 76.3 bits (186), Expect = 7.4e-13
Identity = 69/283 (24.38%), Postives = 115/283 (40.64%), Query Frame = 0
Query: 3 VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
++ ++++ R F+W K +LV+W P GG+GV N+ L++K WR
Sbjct: 62 ILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRL 121
Query: 63 VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPD---------------IQRNQQ 122
+ E+N+ W V+ Y + I KG S W I + Q
Sbjct: 122 LQEKNSLWTLVLQKKYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQ 181
Query: 123 SFEEFSKFQVSCGSPDLFDVSYKKNAS------IKDCWDDSNQTWNLGLHRGLFDRELSN 182
++ VS G P L ++ + + KD W G D +N
Sbjct: 182 QIRFWTDRWVS-GKP-LLELDNGERPTDCDTVVAKDLWIPGR-----GWDFAKIDPYTTN 241
Query: 183 WAALTEMLENIQL-GNQEDKILWKLEPSGAFSCKS---MVRKSINISPNICKSLVGQIWK 242
L + L D++ WK G FS +S M+ PN+ S +WK
Sbjct: 242 NTRLELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMA-SFFNCLWK 301
Query: 243 HKTPKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSS-CRLC 260
+ P++VK FLW V +++ T+++ R+ LS S+ C++C
Sbjct: 302 VRVPERVKTFLWLVGNQAVMTEEERHRR----HLSASNVCQVC 332
BLAST of Spg013566 vs. ExPASy TrEMBL
Match:
A0A5E4GJ11 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035891 PE=4 SV=1)
HSP 1 Score: 187.6 bits (475), Expect = 8.4e-44
Identity = 119/360 (33.06%), Postives = 165/360 (45.83%), Query Frame = 0
Query: 3 VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
V +EK++RDF+W G + K + V W+ GG+GVG+L R+ L KWLWRF
Sbjct: 630 VANRIEKLMRDFLWEGLDGKR-NHAVSWEVVGKAKFCGGLGVGSLRARSAVLRAKWLWRF 689
Query: 63 VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCG-- 122
+E +A W KVI SIYG+D GW +G W DI F F V CG
Sbjct: 690 PNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRSPWRDISSGYNLFLRGCVFVVGCGVR 749
Query: 123 -----------------SPDLFDVSYKKNASIKD--CWDDSNQTWNLGLHRGLFDRELSN 182
P LF++S K+N +I D +W+ G R L + E++
Sbjct: 750 VRFWEDDWSQGGVLKEVFPRLFNLSRKQNHNISSFTSSDGLPLSWDFGFRRNLNELEITE 809
Query: 183 WAALTEMLENIQL-GNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKHKT 242
A L ++LE ++L ++ DK +WKL+PSG F+C S+ N QIWK KT
Sbjct: 810 VARLLDLLEGVRLFTSRLDKRIWKLDPSGLFTCHSLCSHIQNCGEGEIFPPYTQIWKAKT 869
Query: 243 PKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLC----------LMDCEKGSRTG 302
P KVK+F+W L T D +QR+ C+SP C LC L+ C +
Sbjct: 870 PLKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGDSVDHLLLHCPFSLKLW 929
Query: 303 -------------AEG--------LIAWNLKNKAKVIGGCAFRATMWLLWKERNARTFDD 310
EG + A KAK++ G +A +W LW ERN R F+D
Sbjct: 930 ETLLQEVNTVWVIPEGCFELFSIRIDALGRGKKAKILWGSLMQAVVWNLWLERNRRIFED 988
BLAST of Spg013566 vs. ExPASy TrEMBL
Match:
M5XTH8 (zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020284mg PE=4 SV=1)
HSP 1 Score: 186.8 bits (473), Expect = 1.4e-43
Identity = 119/360 (33.06%), Postives = 165/360 (45.83%), Query Frame = 0
Query: 3 VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
V +EK++RDF+W G + K + V W+ GG+GVG+L R+ L KWLWRF
Sbjct: 79 VANRIEKLMRDFLWEGLDGKR-NHAVSWEVVGKAKFCGGLGVGSLRARSAALREKWLWRF 138
Query: 63 VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCG-- 122
+E +A W KVI SIYG+D GW +G W DI F + F+V CG
Sbjct: 139 PNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRSPWRDISSGYNLFLQGCVFKVGCGVR 198
Query: 123 -----------------SPDLFDVSYKKNASIKDC--WDDSNQTWNLGLHRGLFDRELSN 182
P LF++S K+N +I D +W+ G R L + E++
Sbjct: 199 VRFWEDDWSRGGVLKEVFPRLFNLSRKQNHNISSFTGLDGFPLSWDFGFRRNLNELEITE 258
Query: 183 WAALTEMLENIQ-LGNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKHKT 242
A L ++LE ++ + ++ DK WKL+PSG F+C S N S QIWK KT
Sbjct: 259 AARLLDLLEGVRVITSRLDKRRWKLDPSGLFTCHSFCSHIQNRDEGEIFSPYTQIWKAKT 318
Query: 243 PKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLC----------LMDCEKGSR-- 302
P KVK+F+W L T D +QR+ C+SP C LC L+ C +
Sbjct: 319 PPKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGESVDHILIHCPFSLKLW 378
Query: 303 --------------TGAEGLI-----AWNLKNKAKVIGGCAFRATMWLLWKERNARTFDD 310
G L A KAK++ G +A +W LW ERN R F+D
Sbjct: 379 ETLLKEVNSVWVIPKGCFELFSIRFDALGRGKKAKILWGSLMQAVVWNLWMERNRRIFED 437
BLAST of Spg013566 vs. ExPASy TrEMBL
Match:
M5W647 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa019748mg PE=4 SV=1)
HSP 1 Score: 186.4 bits (472), Expect = 1.9e-43
Identity = 116/358 (32.40%), Postives = 165/358 (46.09%), Query Frame = 0
Query: 3 VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
V +EK++RDF+W G + K + V W+ +GG+GVG+L R+ L KWLWRF
Sbjct: 777 VANRIEKLMRDFLWEGLDGKR-NHAVSWEVVGKAKFYGGLGVGSLRARSAALRAKWLWRF 836
Query: 63 VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCG-- 122
+E +A W KVI SIYG+D GW +G +W DI F + F+V CG
Sbjct: 837 PNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRSLWRDISSGYNLFLQGCVFEVGCGVR 896
Query: 123 ---------------SPDLFDVSYKKNASIKDC--WDDSNQTWNLGLHRGLFDRELSNWA 182
P LF++S K+N +I D +W+ R L + E++ A
Sbjct: 897 VRFWEDDWSGVVLEVFPRLFNLSRKQNHNISSFTGLDGFPLSWDFSFRRNLNELEITEAA 956
Query: 183 ALTEMLENIQ-LGNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKHKTPK 242
L ++LE ++ + ++ DK WKL+P G F+C S N S QIWK KTP
Sbjct: 957 RLLDLLEGVRVITSRLDKRRWKLDPFGLFTCHSFCSHIQNRDEREIFSPYTQIWKAKTPP 1016
Query: 243 KVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLC----------LMDCEKGSRTG-- 302
KVK+F+W L T D +QR+ C+SP C LC L+ C +
Sbjct: 1017 KVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGQSVDHLLIHCPFSLKLWET 1076
Query: 303 -----------AEGLI--------AWNLKNKAKVIGGCAFRATMWLLWKERNARTFDD 310
EG A KAK++ G +A +W LW ER+ R F+D
Sbjct: 1077 LLKEVNTVWVIPEGCFELFSIRFDALGRGKKAKILWGSLMQAVVWNLWMERSRRIFED 1133
BLAST of Spg013566 vs. ExPASy TrEMBL
Match:
M5WJI4 (zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020784mg PE=4 SV=1)
HSP 1 Score: 186.4 bits (472), Expect = 1.9e-43
Identity = 118/360 (32.78%), Postives = 164/360 (45.56%), Query Frame = 0
Query: 3 VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
V +EK++RDF+W G + K + V W+ GG+GVG+L R+ L KWLWRF
Sbjct: 102 VANRIEKLMRDFLWEGLDGKR-NHAVSWEVVGKAKFCGGLGVGSLRARSAALRAKWLWRF 161
Query: 63 VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCG-- 122
+E +A W KVI SIYG+D GW +G W DI F + F+V CG
Sbjct: 162 PNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRSPWRDISSGYNLFLQGCVFEVGCGVR 221
Query: 123 -----------------SPDLFDVSYKKNASIKDC--WDDSNQTWNLGLHRGLFDRELSN 182
P LF++S K+N +I D +W+ G R L + E++
Sbjct: 222 VRFWEDDWSRGGVLKEVFPRLFNLSRKQNHNISSFTGLDGFPLSWDFGFRRNLNELEITE 281
Query: 183 WAALTEMLENIQL-GNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKHKT 242
A L ++LE +++ ++ DK WKL+P G F+C S N S QIWK KT
Sbjct: 282 AARLLDLLEGVRVFSSRLDKRRWKLDPFGLFTCHSFCSHIQNRDEGEIFSPYTQIWKAKT 341
Query: 243 PKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLC----------LMDCEKGSRTG 302
P KVK+F+W L T D +QR+ C+SP C LC L+ C +
Sbjct: 342 PPKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGESVDHILIHCPFSLKLW 401
Query: 303 -------------AEGLI--------AWNLKNKAKVIGGCAFRATMWLLWKERNARTFDD 310
EG A KAK++ G +A +W LW ERN R F+D
Sbjct: 402 ETLLKEVNSVWVIPEGCFELFSIRFDALGRGKKAKILWGSLMQAVVWNLWMERNRRIFED 460
BLAST of Spg013566 vs. ExPASy TrEMBL
Match:
M5X4S0 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa021750mg PE=4 SV=1)
HSP 1 Score: 186.0 bits (471), Expect = 2.4e-43
Identity = 113/361 (31.30%), Postives = 172/361 (47.65%), Query Frame = 0
Query: 3 VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
V +E+++R+F+W G C+LVRW+ GG+G+G+L RN+ L KWLWRF
Sbjct: 553 VAAKVEQLMRNFLWEGLEEGKKCHLVRWERVTKSKEEGGLGIGSLRERNEALRAKWLWRF 612
Query: 63 VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCGS- 122
E N+ W ++I S YGID+ GW T I K W +I + SF + +F V G
Sbjct: 613 PLETNSLWHRIIKSKYGIDSNGWDTKRIDKVSCRNPWREISKGYNSFLQCCRFSVGNGEK 672
Query: 123 ------------------PDLFDVSYKKNASIKDCWDDSN---QTWNLGLHRGLFDRELS 182
P L +S +KN SI C+ +++ W+ R L + E++
Sbjct: 673 IRFWEDLWLKEGILKDLFPRLSSLSRRKNQSIA-CFANNHVLPLNWDFDFRRNLSEAEIA 732
Query: 183 NWAALTEMLENIQL-GNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKHK 242
L ++L N++L G++ D+ W++E G+FSCKS ++ + ++ IWK K
Sbjct: 733 EVVILLDILGNVRLYGSRPDRRSWEVEEQGSFSCKSFRSFLLSTTRDVFPPF-SSIWKAK 792
Query: 243 TPKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLC----------LMDCEKGSR- 302
TP K++ F+W A + T D +QR+ CLSPS C LC + C R
Sbjct: 793 TPPKIQFFVWLAANGRINTCDCIQRRQPKMCLSPSWCVLCKENAENIDHLFLHCSYSLRL 852
Query: 303 ----TGAEG-----------LIAWNLK-----NKAKVIGGCAFRATMWLLWKERNARTFD 310
GA G L++ NL+ +A ++ C A W +W ERN R F
Sbjct: 853 WWKMLGALGVEWVIPKGCFELLSINLRISGKGKRAGILRDCLVHAIFWNIWMERNQRIFQ 911
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
VVA39726.1 | 1.7e-43 | 33.06 | Hypothetical predicted protein, partial [Prunus dulcis] | [more] |
XP_020420593.1 | 3.9e-43 | 32.40 | uncharacterized protein LOC18774736 [Prunus persica] | [more] |
TQD93576.1 | 1.1e-42 | 33.15 | hypothetical protein C1H46_020784 [Malus baccata] | [more] |
KAB2623078.1 | 1.1e-42 | 32.87 | ribonuclease H protein [Pyrus ussuriensis x Pyrus communis] | [more] |
BBN69274.1 | 7.3e-42 | 30.77 | TatD related DNase [Prunus dulcis] | [more] |
Match Name | E-value | Identity | Description | |
P0C2F6 | 7.4e-13 | 24.38 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
Match Name | E-value | Identity | Description | |
A0A5E4GJ11 | 8.4e-44 | 33.06 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3... | [more] |
M5XTH8 | 1.4e-43 | 33.06 | zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020284mg ... | [more] |
M5W647 | 1.9e-43 | 32.40 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... | [more] |
M5WJI4 | 1.9e-43 | 32.78 | zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020784mg ... | [more] |
M5X4S0 | 2.4e-43 | 31.30 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... | [more] |
Match Name | E-value | Identity | Description | |