Spg013566 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg013566
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzf-RVT domain-containing protein
Locationscaffold1: 21485884 .. 21487644 (+)
RNA-Seq ExpressionSpg013566
SyntenySpg013566
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTGATCAAAAATATGGAAAAGATTATTAGGGACTTTATATGGAATGGTGGCAATTTCAAGCCTGTTTGTAATCTTGTTAGATGGGATTGGGCGGCTTTGCCCACATCTCATGGAGGCATAGGAGTGGGCACTTTAGATCTTCGCAATCAGACCCTCCTAACTAAATGGCTTTGGAGATTTGTCCATGAGGAAAATGCCACCTGGAGAAAAGTCATTAGCAGCATTTATGGGATTGATAACTTTGGGTGGAGAACTACTGAGATTAAAAAAGGTAGAAGCAGTAGAATTTGGCCAGATATTCAAAGGAACCAGCAAAGCTTTGAGGAGTTTTCCAAGTTCCAAGTTAGTTGTGGCAGCCCAGACCTTTTTGATGTTTCCTACAAGAAGAATGCCTCTATTAAGGATTGTTGGGATGATAGCAATCAAACTTGGAATCTTGGCTTGCATAGGGGGCTGTTTGATCGGGAGCTGAGCAATTGGGCTGCCTTAACAGAGATGCTGGAAAACATCCAGCTGGGAAATCAGGAGGACAAAATCTTGTGGAAACTGGAGCCCTCGGGTGCTTTTTCCTGTAAATCTATGGTGCGGAAATCGATTAATATATCCCCTAATATTTGTAAGTCTCTAGTTGGGCAAATCTGGAAGCACAAAACCCCTAAAAAGGTGAAAGTATTCCTCTGGTCTGTGGCTTATAGGAGCCTGAAAACGGATGACAAAGTGCAAAGAAAGCTGAGGAATTGGTGCCTTTCTCCTTCAAGTTGTAGGCTTTGCCTGATGGATTGTGAAAGTATAGACCATTTATTCCTTCACTGTGTGTTTGCTCAGAAGCCTTGGAACTTGATTGGTGGCTTACTGGGGCTTTCTTTTTGTGTGCCGAGAAGGGTCGAGGACTGGCGCTGAAGGCTTGATCGCTTGGAACTTAAAGAATAAGGCTAAGGTGATTGGTGGATGCGCGTTTAGAGCGACCATGTGGCTTTTGTGGAAGGAGAGGAACGCTAGAACCTTCGACGATAAATCGTCTTCTTTTGAGCTCTTTGCTAGTTCTGTAAAGAATATTGCTTCTTGGTGGATCTCCTCACATAAGAAGATTTTTTTGTAATTATAGCTTACTTATGATTATTAGTGATTATTAGTGATTGGCAGGCTCTTTTGAGATAGTTTCTTGGGCGGGGCGATCTCCACCCCGGCCCCTAGGTTGTCAATTCTTTTTTGTGATTAATACATATCTTTTGAATGTTTCCTATAAAAAAAAAAAATATATTAGAGTTTAGGCTAGGTACAAAATAGTTGAAAAATAGTGAGTAAAAATGGTTTATTTCGTAATTTATTATGACTCGAGAAGATAATATATACTCCCATTCTGAGGCTATGCCGCTATGGGAAATTATAGAAAGCCTCTCGAAGACAACGAGAAAAGCAAACAAGTTCTTGTTGTGCATACAAATTTCCCAGTAAAATTCTAAAGAAGTGTCCTAAAGGAAGGATGAATTTTACAAAACTTTATAAATGATAGAATTGGGGGGTGGGGTCCTAAAGTAAGCCATCCGCCACTGTGAAGCATTATTAGATTGCAGTCTCATTTACCACACAAAAGCACACGTTATATTCTATTCACAAACAATTTGCAACTTAACTTAGGTTATTTTGGCTGTAAGATTTCCATATTTTGTGAAGTGGAATCAACCTAGTGGCATCTATGAGGAAGGTGACACAAAGGAGGCTCAAGTGCTTGTTAAGGGTGGTGGCAAAGGCTGA

mRNA sequence

ATGAAGGTGATCAAAAATATGGAAAAGATTATTAGGGACTTTATATGGAATGGTGGCAATTTCAAGCCTGTTTGTAATCTTGTTAGATGGGATTGGGCGGCTTTGCCCACATCTCATGGAGGCATAGGAGTGGGCACTTTAGATCTTCGCAATCAGACCCTCCTAACTAAATGGCTTTGGAGATTTGTCCATGAGGAAAATGCCACCTGGAGAAAAGTCATTAGCAGCATTTATGGGATTGATAACTTTGGGTGGAGAACTACTGAGATTAAAAAAGGTAGAAGCAGTAGAATTTGGCCAGATATTCAAAGGAACCAGCAAAGCTTTGAGGAGTTTTCCAAGTTCCAAGTTAGTTGTGGCAGCCCAGACCTTTTTGATGTTTCCTACAAGAAGAATGCCTCTATTAAGGATTGTTGGGATGATAGCAATCAAACTTGGAATCTTGGCTTGCATAGGGGGCTGTTTGATCGGGAGCTGAGCAATTGGGCTGCCTTAACAGAGATGCTGGAAAACATCCAGCTGGGAAATCAGGAGGACAAAATCTTGTGGAAACTGGAGCCCTCGGGTGCTTTTTCCTGTAAATCTATGGTGCGGAAATCGATTAATATATCCCCTAATATTTGTAAGTCTCTAGTTGGGCAAATCTGGAAGCACAAAACCCCTAAAAAGGTGAAAGTATTCCTCTGGTCTGTGGCTTATAGGAGCCTGAAAACGGATGACAAAGTGCAAAGAAAGCTGAGGAATTGGTGCCTTTCTCCTTCAAGTTGTAGGCTTTGCCTGATGGATTGTGAAAAAGGGTCGAGGACTGGCGCTGAAGGCTTGATCGCTTGGAACTTAAAGAATAAGGCTAAGGTGATTGGTGGATGCGCGTTTAGAGCGACCATGTGGCTTTTGTGGAAGGAGAGGAACGCTAGAACCTTCGACGATAAATCGTCTTCTTTTGAGCTCTTTGCTAGTTCTGTAAAGAATATTGCTTCTTGA

Coding sequence (CDS)

ATGAAGGTGATCAAAAATATGGAAAAGATTATTAGGGACTTTATATGGAATGGTGGCAATTTCAAGCCTGTTTGTAATCTTGTTAGATGGGATTGGGCGGCTTTGCCCACATCTCATGGAGGCATAGGAGTGGGCACTTTAGATCTTCGCAATCAGACCCTCCTAACTAAATGGCTTTGGAGATTTGTCCATGAGGAAAATGCCACCTGGAGAAAAGTCATTAGCAGCATTTATGGGATTGATAACTTTGGGTGGAGAACTACTGAGATTAAAAAAGGTAGAAGCAGTAGAATTTGGCCAGATATTCAAAGGAACCAGCAAAGCTTTGAGGAGTTTTCCAAGTTCCAAGTTAGTTGTGGCAGCCCAGACCTTTTTGATGTTTCCTACAAGAAGAATGCCTCTATTAAGGATTGTTGGGATGATAGCAATCAAACTTGGAATCTTGGCTTGCATAGGGGGCTGTTTGATCGGGAGCTGAGCAATTGGGCTGCCTTAACAGAGATGCTGGAAAACATCCAGCTGGGAAATCAGGAGGACAAAATCTTGTGGAAACTGGAGCCCTCGGGTGCTTTTTCCTGTAAATCTATGGTGCGGAAATCGATTAATATATCCCCTAATATTTGTAAGTCTCTAGTTGGGCAAATCTGGAAGCACAAAACCCCTAAAAAGGTGAAAGTATTCCTCTGGTCTGTGGCTTATAGGAGCCTGAAAACGGATGACAAAGTGCAAAGAAAGCTGAGGAATTGGTGCCTTTCTCCTTCAAGTTGTAGGCTTTGCCTGATGGATTGTGAAAAAGGGTCGAGGACTGGCGCTGAAGGCTTGATCGCTTGGAACTTAAAGAATAAGGCTAAGGTGATTGGTGGATGCGCGTTTAGAGCGACCATGTGGCTTTTGTGGAAGGAGAGGAACGCTAGAACCTTCGACGATAAATCGTCTTCTTTTGAGCTCTTTGCTAGTTCTGTAAAGAATATTGCTTCTTGA

Protein sequence

MKVIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRFVHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCGSPDLFDVSYKKNASIKDCWDDSNQTWNLGLHRGLFDRELSNWAALTEMLENIQLGNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKHKTPKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLCLMDCEKGSRTGAEGLIAWNLKNKAKVIGGCAFRATMWLLWKERNARTFDDKSSSFELFASSVKNIAS
Homology
BLAST of Spg013566 vs. NCBI nr
Match: VVA39726.1 (Hypothetical predicted protein, partial [Prunus dulcis])

HSP 1 Score: 187.6 bits (475), Expect = 1.7e-43
Identity = 119/360 (33.06%), Postives = 165/360 (45.83%), Query Frame = 0

Query: 3   VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
           V   +EK++RDF+W G + K   + V W+        GG+GVG+L  R+  L  KWLWRF
Sbjct: 630 VANRIEKLMRDFLWEGLDGKR-NHAVSWEVVGKAKFCGGLGVGSLRARSAVLRAKWLWRF 689

Query: 63  VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCG-- 122
            +E +A W KVI SIYG+D  GW      +G     W DI      F     F V CG  
Sbjct: 690 PNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRSPWRDISSGYNLFLRGCVFVVGCGVR 749

Query: 123 -----------------SPDLFDVSYKKNASIKD--CWDDSNQTWNLGLHRGLFDRELSN 182
                             P LF++S K+N +I      D    +W+ G  R L + E++ 
Sbjct: 750 VRFWEDDWSQGGVLKEVFPRLFNLSRKQNHNISSFTSSDGLPLSWDFGFRRNLNELEITE 809

Query: 183 WAALTEMLENIQL-GNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKHKT 242
            A L ++LE ++L  ++ DK +WKL+PSG F+C S+     N           QIWK KT
Sbjct: 810 VARLLDLLEGVRLFTSRLDKRIWKLDPSGLFTCHSLCSHIQNCGEGEIFPPYTQIWKAKT 869

Query: 243 PKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLC----------LMDCEKGSRTG 302
           P KVK+F+W      L T D +QR+    C+SP  C LC          L+ C    +  
Sbjct: 870 PLKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGDSVDHLLLHCPFSLKLW 929

Query: 303 -------------AEG--------LIAWNLKNKAKVIGGCAFRATMWLLWKERNARTFDD 310
                         EG        + A     KAK++ G   +A +W LW ERN R F+D
Sbjct: 930 ETLLQEVNTVWVIPEGCFELFSIRIDALGRGKKAKILWGSLMQAVVWNLWLERNRRIFED 988

BLAST of Spg013566 vs. NCBI nr
Match: XP_020420593.1 (uncharacterized protein LOC18774736 [Prunus persica])

HSP 1 Score: 186.4 bits (472), Expect = 3.9e-43
Identity = 116/358 (32.40%), Postives = 165/358 (46.09%), Query Frame = 0

Query: 3    VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
            V   +EK++RDF+W G + K   + V W+       +GG+GVG+L  R+  L  KWLWRF
Sbjct: 659  VANRIEKLMRDFLWEGLDGKR-NHAVSWEVVGKAKFYGGLGVGSLRARSAALRAKWLWRF 718

Query: 63   VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCG-- 122
             +E +A W KVI SIYG+D  GW      +G    +W DI      F +   F+V CG  
Sbjct: 719  PNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRSLWRDISSGYNLFLQGCVFEVGCGVR 778

Query: 123  ---------------SPDLFDVSYKKNASIKDC--WDDSNQTWNLGLHRGLFDRELSNWA 182
                            P LF++S K+N +I      D    +W+    R L + E++  A
Sbjct: 779  VRFWEDDWSGVVLEVFPRLFNLSRKQNHNISSFTGLDGFPLSWDFSFRRNLNELEITEAA 838

Query: 183  ALTEMLENIQ-LGNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKHKTPK 242
             L ++LE ++ + ++ DK  WKL+P G F+C S      N       S   QIWK KTP 
Sbjct: 839  RLLDLLEGVRVITSRLDKRRWKLDPFGLFTCHSFCSHIQNRDEREIFSPYTQIWKAKTPP 898

Query: 243  KVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLC----------LMDCEKGSRTG-- 302
            KVK+F+W      L T D +QR+    C+SP  C LC          L+ C    +    
Sbjct: 899  KVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGQSVDHLLIHCPFSLKLWET 958

Query: 303  -----------AEGLI--------AWNLKNKAKVIGGCAFRATMWLLWKERNARTFDD 310
                        EG          A     KAK++ G   +A +W LW ER+ R F+D
Sbjct: 959  LLKEVNTVWVIPEGCFELFSIRFDALGRGKKAKILWGSLMQAVVWNLWMERSRRIFED 1015

BLAST of Spg013566 vs. NCBI nr
Match: TQD93576.1 (hypothetical protein C1H46_020784 [Malus baccata])

HSP 1 Score: 184.9 bits (468), Expect = 1.1e-42
Identity = 120/362 (33.15%), Postives = 162/362 (44.75%), Query Frame = 0

Query: 3   VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
           VI  +EK+++ F+W G       +LV+W+        GG+GVG L  RN+ LL KWLWRF
Sbjct: 109 VIGRLEKLMKGFLWEGVEEGKKNHLVKWEIVIKSKEEGGLGVGNLRNRNEALLAKWLWRF 168

Query: 63  VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCGS- 122
             E ++ W KVI S YG+ N GW      +G S   W DI    Q F    KF+V  G  
Sbjct: 169 PKEPHSLWHKVIRSKYGLQNNGWNAFPPMRGSSRSPWKDISSGSQLFLHCCKFEVGNGER 228

Query: 123 ------------------PDLFDVSYKKNASIKDCWDDSNQ--TWNLGLHRGLFDRELSN 182
                             P LF +S   N +I    D S    +WN    R L + E+  
Sbjct: 229 VRFWEDGWLEGGPLKEQFPRLFLLSRMHNQNISSFADFSTNSLSWNFDFRRNLNEAEIEE 288

Query: 183 WAALTEMLENIQLG-NQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSL--VGQIWKH 242
            A L + +E ++L  ++ D   WKLE S  F+CKS   +S   +  I +      QIWK 
Sbjct: 289 AARLLQKVEEVRLSQSRTDNRRWKLEASRLFTCKSY--RSFLSNNGIMQYFPPYSQIWKS 348

Query: 243 KTPKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLC----------LMDCE---- 302
           K P KVK+ +W VA   L T D++QR+    CLSP  C LC           + C     
Sbjct: 349 KVPPKVKILVWLVAKGKLNTCDQIQRRSHFICLSPHWCSLCKAKEESVNHIFLHCSYTIQ 408

Query: 303 ---------KGSRTGAEGLI--------AWNLKNKAKVIGGCAFRATMWLLWKERNARTF 310
                    + S    +G          A  +  KAKV+ GC   A  W +W ERN R F
Sbjct: 409 LWWKLFQEVRASWVIPKGCFELLSTKFQALGIGRKAKVLWGCLVSAVFWNIWLERNKRIF 468

BLAST of Spg013566 vs. NCBI nr
Match: KAB2623078.1 (ribonuclease H protein [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 184.9 bits (468), Expect = 1.1e-42
Identity = 119/362 (32.87%), Postives = 166/362 (45.86%), Query Frame = 0

Query: 3   VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
           VI  +EK+++ F+W G       +LV+W+        GG+GVG L  +N+ LL KWLWRF
Sbjct: 43  VIGRLEKLMKGFLWEGVEEGKKNHLVKWEIVIKSKEEGGLGVGNLRNQNEALLAKWLWRF 102

Query: 63  VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCGS- 122
             E N+ W KVI + YG+ + GW      +G S   W DI    QSF +  KF+V  G  
Sbjct: 103 PKEPNSLWHKVIRTKYGLQDNGWNANPPVRGSSRSPWKDISCGLQSFLQCCKFKVGNGER 162

Query: 123 ------------------PDLFDVSYKKNASIKDCWDDSNQ--TWNLGLHRGLFDRELSN 182
                             P LF +S + N +I    D S    +WN    R L + E+  
Sbjct: 163 VKCWEDGWLEGGPLKEQFPRLFLLSRRHNQNIASFVDLSINFLSWNFDFRRNLNEVEIEE 222

Query: 183 WAALTEMLENIQLG-NQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSL--VGQIWKH 242
            A L + +EN++L  ++ D   WKL+ SG F+CKS   +S   +  I +      QIWK 
Sbjct: 223 AARLLQKVENVRLSQSRADDRRWKLDLSGLFTCKSY--RSFLSNNGIVQHFPPSSQIWKS 282

Query: 243 KTPKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLCLMDCEKGS----------- 302
           K P KVKV +W VA   L T D++QR+    C+SP  C LC    E  +           
Sbjct: 283 KVPPKVKVLVWLVAIGRLNTCDQIQRRSPFICISPHWCSLCKAKEESVNHIFLHCSYTIQ 342

Query: 303 ---RTGAEGLIAW-----------------NLKNKAKVIGGCAFRATMWLLWKERNARTF 310
              +   E  ++W                  +  KAK + GC   A  W +W ERN R F
Sbjct: 343 LWWKLFQEVRVSWVIPKGCFELLSTNFEALGIGRKAKALWGCLVSAVFWNIWLERNKRIF 402

BLAST of Spg013566 vs. NCBI nr
Match: BBN69274.1 (TatD related DNase [Prunus dulcis])

HSP 1 Score: 182.2 bits (461), Expect = 7.3e-42
Identity = 112/364 (30.77%), Postives = 168/364 (46.15%), Query Frame = 0

Query: 3   VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
           V   +E+++R+F+W G      C+LVRW         GG+G+G+L  RN+ L  KWLWRF
Sbjct: 573 VTAKVEQLMRNFLWEGVEEGKNCHLVRWVRVTKSKEEGGLGIGSLRERNEALRAKWLWRF 632

Query: 63  VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCGS- 122
             E N+ W ++I S YG+D+ GW T +I K      W +I +   SF +  +F V  G  
Sbjct: 633 PLETNSLWHRIIKSKYGLDSNGWDTKQIDKVSCRNPWREISKGYISFLQCCRFSVGNGEK 692

Query: 123 ------------------PDLFDVSYKKNASIKDCWDDSNQ----TWNLGLHRGLFDREL 182
                             P L+ +S +KN  I   W  +N      W+    R L + E+
Sbjct: 693 IRFWEDFWLKEGILKDLFPRLYSLSRRKNQCI--AWFANNHEMPLNWDFDFRRNLSEAEI 752

Query: 183 SNWAALTEMLENIQL-GNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKH 242
           +    L ++L N++L G++ D+  W++E  G+FSCKS  R  +  + ++       IWK 
Sbjct: 753 AEVVLLLDILGNVRLFGSRPDRRSWEIEEQGSFSCKSF-RSFLISTTSVVFPPYRSIWKA 812

Query: 243 KTPKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLCLMDCEKGSR---------- 302
           KTP K++ F+W  A   + T D +QR+    CLSPS C  C  + E              
Sbjct: 813 KTPPKIQFFVWLAANGRINTCDCIQRRQPKMCLSPSWCVFCKENAENIDHLFIHCSYSLK 872

Query: 303 --------TGAE--------GLIAWNLK-----NKAKVIGGCAFRATMWLLWKERNARTF 312
                    GAE         L++ NL+      KA ++  C   A  W +W ERN R F
Sbjct: 873 LWWRMLDALGAEWVIPKGCFELLSINLRISGKGKKAGILRDCLIHAIFWNIWMERNRRIF 932

BLAST of Spg013566 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 7.4e-13
Identity = 69/283 (24.38%), Postives = 115/283 (40.64%), Query Frame = 0

Query: 3   VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
           ++  ++++ R F+W     K   +LV+W     P   GG+GV      N+ L++K  WR 
Sbjct: 62  ILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRL 121

Query: 63  VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPD---------------IQRNQQ 122
           + E+N+ W  V+   Y +         I KG  S  W                 I  + Q
Sbjct: 122 LQEKNSLWTLVLQKKYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQ 181

Query: 123 SFEEFSKFQVSCGSPDLFDVSYKKNAS------IKDCWDDSNQTWNLGLHRGLFDRELSN 182
               ++   VS G P L ++   +  +       KD W         G      D   +N
Sbjct: 182 QIRFWTDRWVS-GKP-LLELDNGERPTDCDTVVAKDLWIPGR-----GWDFAKIDPYTTN 241

Query: 183 WAALTEMLENIQL-GNQEDKILWKLEPSGAFSCKS---MVRKSINISPNICKSLVGQIWK 242
              L      + L     D++ WK    G FS +S   M+       PN+  S    +WK
Sbjct: 242 NTRLELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMA-SFFNCLWK 301

Query: 243 HKTPKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSS-CRLC 260
            + P++VK FLW V  +++ T+++  R+     LS S+ C++C
Sbjct: 302 VRVPERVKTFLWLVGNQAVMTEEERHRR----HLSASNVCQVC 332

BLAST of Spg013566 vs. ExPASy TrEMBL
Match: A0A5E4GJ11 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035891 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 8.4e-44
Identity = 119/360 (33.06%), Postives = 165/360 (45.83%), Query Frame = 0

Query: 3   VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
           V   +EK++RDF+W G + K   + V W+        GG+GVG+L  R+  L  KWLWRF
Sbjct: 630 VANRIEKLMRDFLWEGLDGKR-NHAVSWEVVGKAKFCGGLGVGSLRARSAVLRAKWLWRF 689

Query: 63  VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCG-- 122
            +E +A W KVI SIYG+D  GW      +G     W DI      F     F V CG  
Sbjct: 690 PNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRSPWRDISSGYNLFLRGCVFVVGCGVR 749

Query: 123 -----------------SPDLFDVSYKKNASIKD--CWDDSNQTWNLGLHRGLFDRELSN 182
                             P LF++S K+N +I      D    +W+ G  R L + E++ 
Sbjct: 750 VRFWEDDWSQGGVLKEVFPRLFNLSRKQNHNISSFTSSDGLPLSWDFGFRRNLNELEITE 809

Query: 183 WAALTEMLENIQL-GNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKHKT 242
            A L ++LE ++L  ++ DK +WKL+PSG F+C S+     N           QIWK KT
Sbjct: 810 VARLLDLLEGVRLFTSRLDKRIWKLDPSGLFTCHSLCSHIQNCGEGEIFPPYTQIWKAKT 869

Query: 243 PKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLC----------LMDCEKGSRTG 302
           P KVK+F+W      L T D +QR+    C+SP  C LC          L+ C    +  
Sbjct: 870 PLKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGDSVDHLLLHCPFSLKLW 929

Query: 303 -------------AEG--------LIAWNLKNKAKVIGGCAFRATMWLLWKERNARTFDD 310
                         EG        + A     KAK++ G   +A +W LW ERN R F+D
Sbjct: 930 ETLLQEVNTVWVIPEGCFELFSIRIDALGRGKKAKILWGSLMQAVVWNLWLERNRRIFED 988

BLAST of Spg013566 vs. ExPASy TrEMBL
Match: M5XTH8 (zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020284mg PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.4e-43
Identity = 119/360 (33.06%), Postives = 165/360 (45.83%), Query Frame = 0

Query: 3   VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
           V   +EK++RDF+W G + K   + V W+        GG+GVG+L  R+  L  KWLWRF
Sbjct: 79  VANRIEKLMRDFLWEGLDGKR-NHAVSWEVVGKAKFCGGLGVGSLRARSAALREKWLWRF 138

Query: 63  VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCG-- 122
            +E +A W KVI SIYG+D  GW      +G     W DI      F +   F+V CG  
Sbjct: 139 PNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRSPWRDISSGYNLFLQGCVFKVGCGVR 198

Query: 123 -----------------SPDLFDVSYKKNASIKDC--WDDSNQTWNLGLHRGLFDRELSN 182
                             P LF++S K+N +I      D    +W+ G  R L + E++ 
Sbjct: 199 VRFWEDDWSRGGVLKEVFPRLFNLSRKQNHNISSFTGLDGFPLSWDFGFRRNLNELEITE 258

Query: 183 WAALTEMLENIQ-LGNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKHKT 242
            A L ++LE ++ + ++ DK  WKL+PSG F+C S      N       S   QIWK KT
Sbjct: 259 AARLLDLLEGVRVITSRLDKRRWKLDPSGLFTCHSFCSHIQNRDEGEIFSPYTQIWKAKT 318

Query: 243 PKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLC----------LMDCEKGSR-- 302
           P KVK+F+W      L T D +QR+    C+SP  C LC          L+ C    +  
Sbjct: 319 PPKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGESVDHILIHCPFSLKLW 378

Query: 303 --------------TGAEGLI-----AWNLKNKAKVIGGCAFRATMWLLWKERNARTFDD 310
                          G   L      A     KAK++ G   +A +W LW ERN R F+D
Sbjct: 379 ETLLKEVNSVWVIPKGCFELFSIRFDALGRGKKAKILWGSLMQAVVWNLWMERNRRIFED 437

BLAST of Spg013566 vs. ExPASy TrEMBL
Match: M5W647 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa019748mg PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.9e-43
Identity = 116/358 (32.40%), Postives = 165/358 (46.09%), Query Frame = 0

Query: 3    VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
            V   +EK++RDF+W G + K   + V W+       +GG+GVG+L  R+  L  KWLWRF
Sbjct: 777  VANRIEKLMRDFLWEGLDGKR-NHAVSWEVVGKAKFYGGLGVGSLRARSAALRAKWLWRF 836

Query: 63   VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCG-- 122
             +E +A W KVI SIYG+D  GW      +G    +W DI      F +   F+V CG  
Sbjct: 837  PNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRSLWRDISSGYNLFLQGCVFEVGCGVR 896

Query: 123  ---------------SPDLFDVSYKKNASIKDC--WDDSNQTWNLGLHRGLFDRELSNWA 182
                            P LF++S K+N +I      D    +W+    R L + E++  A
Sbjct: 897  VRFWEDDWSGVVLEVFPRLFNLSRKQNHNISSFTGLDGFPLSWDFSFRRNLNELEITEAA 956

Query: 183  ALTEMLENIQ-LGNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKHKTPK 242
             L ++LE ++ + ++ DK  WKL+P G F+C S      N       S   QIWK KTP 
Sbjct: 957  RLLDLLEGVRVITSRLDKRRWKLDPFGLFTCHSFCSHIQNRDEREIFSPYTQIWKAKTPP 1016

Query: 243  KVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLC----------LMDCEKGSRTG-- 302
            KVK+F+W      L T D +QR+    C+SP  C LC          L+ C    +    
Sbjct: 1017 KVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGQSVDHLLIHCPFSLKLWET 1076

Query: 303  -----------AEGLI--------AWNLKNKAKVIGGCAFRATMWLLWKERNARTFDD 310
                        EG          A     KAK++ G   +A +W LW ER+ R F+D
Sbjct: 1077 LLKEVNTVWVIPEGCFELFSIRFDALGRGKKAKILWGSLMQAVVWNLWMERSRRIFED 1133

BLAST of Spg013566 vs. ExPASy TrEMBL
Match: M5WJI4 (zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020784mg PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.9e-43
Identity = 118/360 (32.78%), Postives = 164/360 (45.56%), Query Frame = 0

Query: 3   VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
           V   +EK++RDF+W G + K   + V W+        GG+GVG+L  R+  L  KWLWRF
Sbjct: 102 VANRIEKLMRDFLWEGLDGKR-NHAVSWEVVGKAKFCGGLGVGSLRARSAALRAKWLWRF 161

Query: 63  VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCG-- 122
            +E +A W KVI SIYG+D  GW      +G     W DI      F +   F+V CG  
Sbjct: 162 PNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCRSPWRDISSGYNLFLQGCVFEVGCGVR 221

Query: 123 -----------------SPDLFDVSYKKNASIKDC--WDDSNQTWNLGLHRGLFDRELSN 182
                             P LF++S K+N +I      D    +W+ G  R L + E++ 
Sbjct: 222 VRFWEDDWSRGGVLKEVFPRLFNLSRKQNHNISSFTGLDGFPLSWDFGFRRNLNELEITE 281

Query: 183 WAALTEMLENIQL-GNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKHKT 242
            A L ++LE +++  ++ DK  WKL+P G F+C S      N       S   QIWK KT
Sbjct: 282 AARLLDLLEGVRVFSSRLDKRRWKLDPFGLFTCHSFCSHIQNRDEGEIFSPYTQIWKAKT 341

Query: 243 PKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLC----------LMDCEKGSRTG 302
           P KVK+F+W      L T D +QR+    C+SP  C LC          L+ C    +  
Sbjct: 342 PPKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKAGESVDHILIHCPFSLKLW 401

Query: 303 -------------AEGLI--------AWNLKNKAKVIGGCAFRATMWLLWKERNARTFDD 310
                         EG          A     KAK++ G   +A +W LW ERN R F+D
Sbjct: 402 ETLLKEVNSVWVIPEGCFELFSIRFDALGRGKKAKILWGSLMQAVVWNLWMERNRRIFED 460

BLAST of Spg013566 vs. ExPASy TrEMBL
Match: M5X4S0 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa021750mg PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.4e-43
Identity = 113/361 (31.30%), Postives = 172/361 (47.65%), Query Frame = 0

Query: 3   VIKNMEKIIRDFIWNGGNFKPVCNLVRWDWAALPTSHGGIGVGTLDLRNQTLLTKWLWRF 62
           V   +E+++R+F+W G      C+LVRW+        GG+G+G+L  RN+ L  KWLWRF
Sbjct: 553 VAAKVEQLMRNFLWEGLEEGKKCHLVRWERVTKSKEEGGLGIGSLRERNEALRAKWLWRF 612

Query: 63  VHEENATWRKVISSIYGIDNFGWRTTEIKKGRSSRIWPDIQRNQQSFEEFSKFQVSCGS- 122
             E N+ W ++I S YGID+ GW T  I K      W +I +   SF +  +F V  G  
Sbjct: 613 PLETNSLWHRIIKSKYGIDSNGWDTKRIDKVSCRNPWREISKGYNSFLQCCRFSVGNGEK 672

Query: 123 ------------------PDLFDVSYKKNASIKDCWDDSN---QTWNLGLHRGLFDRELS 182
                             P L  +S +KN SI  C+ +++     W+    R L + E++
Sbjct: 673 IRFWEDLWLKEGILKDLFPRLSSLSRRKNQSIA-CFANNHVLPLNWDFDFRRNLSEAEIA 732

Query: 183 NWAALTEMLENIQL-GNQEDKILWKLEPSGAFSCKSMVRKSINISPNICKSLVGQIWKHK 242
               L ++L N++L G++ D+  W++E  G+FSCKS     ++ + ++       IWK K
Sbjct: 733 EVVILLDILGNVRLYGSRPDRRSWEVEEQGSFSCKSFRSFLLSTTRDVFPPF-SSIWKAK 792

Query: 243 TPKKVKVFLWSVAYRSLKTDDKVQRKLRNWCLSPSSCRLC----------LMDCEKGSR- 302
           TP K++ F+W  A   + T D +QR+    CLSPS C LC           + C    R 
Sbjct: 793 TPPKIQFFVWLAANGRINTCDCIQRRQPKMCLSPSWCVLCKENAENIDHLFLHCSYSLRL 852

Query: 303 ----TGAEG-----------LIAWNLK-----NKAKVIGGCAFRATMWLLWKERNARTFD 310
                GA G           L++ NL+      +A ++  C   A  W +W ERN R F 
Sbjct: 853 WWKMLGALGVEWVIPKGCFELLSINLRISGKGKRAGILRDCLVHAIFWNIWMERNQRIFQ 911

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
VVA39726.11.7e-4333.06Hypothetical predicted protein, partial [Prunus dulcis][more]
XP_020420593.13.9e-4332.40uncharacterized protein LOC18774736 [Prunus persica][more]
TQD93576.11.1e-4233.15hypothetical protein C1H46_020784 [Malus baccata][more]
KAB2623078.11.1e-4232.87ribonuclease H protein [Pyrus ussuriensis x Pyrus communis][more]
BBN69274.17.3e-4230.77TatD related DNase [Prunus dulcis][more]
Match NameE-valueIdentityDescription
P0C2F67.4e-1324.38Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A5E4GJ118.4e-4433.06Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3... [more]
M5XTH81.4e-4333.06zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020284mg ... [more]
M5W6471.9e-4332.40Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... [more]
M5WJI41.9e-4332.78zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020784mg ... [more]
M5X4S02.4e-4331.30Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg013566.1Spg013566.1mRNA