Spg013559 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg013559
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like
Location	scaffold1: 14208559 .. 14210549 (-)
RNA-Seq Expression	Spg013559
Synteny	Spg013559

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCCGTCAGAAGAAGGCAGTGAAAGGAAAGACGTGCCATCGCACATCCTACGACAGCCAAGAGGGTCGTATGAAGATAACACGACGTCGTTGCACTGCATCGAGGCCACGCATTGGAAGGAATCATGTCTTCCTTAGCCTCAGCCAGGTGCCATTGGAATTCGGAAGGATAAATTTTAAAAAAATCAAACCATAAAACAGATAGATAAATACGATATACACATATATAAACAAATCCTAAAATTAAAATATTCTCAAAGTCCTCGAATCCAACCTCTCCCACCCCCACACTTCACTTCTTTTATTTATCAACACCATCGAAAACAGATGCTGTGGTCGGCTTCCTGCGATTTCCATCTCTCTTTCTTCACCAACAATGGACCAACAGAACCCATCTCACTGTCACACTGACAGGTGCGTCTCTCTAGCTATCTCTATCTCTGTTTGGCAGCCATGGCTGATTGTGGACAAGCTCGTGTGAAGATACAGAAAGGGAAAGAGAGATCTTGAATCTTGTTAATGGCTTTTGGATTTTTATGCTGTTTCTTTTCTTCTTTTTGGATCGTGGGTTGGTTTTGTTTTTGTTTGTTGTTGTAAGTTTGCAGTTTGTAGGCTGTCTTTCTCGAGATTATGCTCGAGTTTGACTCTGGTTTTCTGCATTTTGATTGTGTTTAAGGGAGAAACTTGTTTGTAGAAATTACAACTCTCTTTGTTTCTTTTAGGGGGAAAATTGGCTTCCTGTGCTATGGTTAATCTAACTTAAATTTTTCTGTTTTGTCTTAAAATTAATACTTCCTTTGTTTTATGATTCGGCCATACTGGTTCAGTAGTGGCTCTGAGATTCATGGTTTTCTGTGTTTTCATTTTTCAAAAACCCTAGTCAAATTATAAACAAACATACAAGAAAACCATTATCCAAGGGTTCCTTCAATTTCCAAGATTTGGAATAAACGTAGAACTTTAAATAAGCCCTAAAATACTAAGTATGCAATGAAACTTGACAGAATCGGTTATCAAACTGACCTCAATCACTCAACGACTTTGTAAAGTTCTTGCAGCTTCCATGGCTTTCAACCATGGAATACAAGCGGCTTTGATGTAAAGAAGAAGAGAAAGCTGCTAATTGAGCAACTAAGCTTACCCACACCAAAGCTACCATGTTGGGGTCCAACATCAACTAGCTTTCCCCATGGAGATAACTTTAAGTTTAACAAAAACCATCCTCAAGAAGAAGAAGAAGAAAGCAATGTTACAAGAATGGCAATAGAAGTTGAGATGTCCAAAGAGGAGGTTCGAATTCAGGGTAAGAGAGATGGCATCAAAGATGAGTTGCAGCGAAGCTATGGCCATGAGGAAGATCTGTTGGAGTTCGGAAGCCATGGAAATAGCAGCATTGATGAGCCATGTTGCAGTCCCAGTGCTCAAAGCTTGCTCCTGTCTGGAGACTCCAAGCATGACTTTGTTTTGTCATCAGGGAGATGGACCATAGATCCAGGTATTTAAATTCTCATTTCATCTTTGCAAATCATAAAGATTCAAATGAAATCAGTGATAAAACTGAATGATGAAAATAAGATTTAAACCAGAGACCATAAGAATTAAAAAATGACATCTAGGGATAAGGGGATTTCTTATTTCACCCGTGAGAGTTCTAAAGCAAAAAATTGAGATGTTGGGTCAGTTTAAGTTTATGTTTTTCTCATACACAAATTAAATTTGAATCATTCAAATATGCAGAGGCAGAATCCAAGACTATCAAACCAACCATTGATCAAGAGTTTGAGCAGTACTTTTCTGTGCTTTTGCCGTCCTTCGATCCCTGATGTTTACATATCTTGAATCTCTGTATATAATTCAAGGAATCTTGAAGTGTGCGTGTGTGTGTTCTTTGAGATGAAAAAATTTCAGCAAGTGTGCGACAATTCAATTCAAGTGATGTCTGTGAATGTGAGATCAAGTTAATGAGAATGCACGGAACTGGTTTCTGCA

mRNA sequence

ATGCGCCGTCAGAAGAAGGCAGTGAAAGGAAAGACGTGCCATCGCACATCCTACGACAGCCAAGAGGGTCGTATGAAGATAACACGACGTCGTTGCACTGCATCGAGGCCACGCATTGGAAGGAATCATGTCTTCCTTAGCCTCAGCCAGGGGGAAAATTGGCTTCCTGTGCTATGCTTCCATGGCTTTCAACCATGGAATACAAGCGGCTTTGATGTAAAGAAGAAGAGAAAGCTGCTAATTGAGCAACTAAGCTTACCCACACCAAAGCTACCATGTTGGGGTCCAACATCAACTAGCTTTCCCCATGGAGATAACTTTAAGTTTAACAAAAACCATCCTCAAGAAGAAGAAGAAGAAAGCAATGTTACAAGAATGGCAATAGAAGTTGAGATGTCCAAAGAGGAGGTTCGAATTCAGGGTAAGAGAGATGGCATCAAAGATGAGTTGCAGCGAAGCTATGGCCATGAGGAAGATCTGTTGGAGTTCGGAAGCCATGGAAATAGCAGCATTGATGAGCCATGTTGCAGTCCCAGTGCTCAAAGCTTGCTCCTGTCTGGAGACTCCAAGCATGACTTTGTTTTGTCATCAGGGAGATGGACCATAGATCCAGAGGCAGAATCCAAGACTATCAAACCAACCATTGATCAAGAGTTTGAGCAGTACTTTTCTGTGCTTTTGCCGTCCTTCGATCCCTGA

Coding sequence (CDS)

ATGCGCCGTCAGAAGAAGGCAGTGAAAGGAAAGACGTGCCATCGCACATCCTACGACAGCCAAGAGGGTCGTATGAAGATAACACGACGTCGTTGCACTGCATCGAGGCCACGCATTGGAAGGAATCATGTCTTCCTTAGCCTCAGCCAGGGGGAAAATTGGCTTCCTGTGCTATGCTTCCATGGCTTTCAACCATGGAATACAAGCGGCTTTGATGTAAAGAAGAAGAGAAAGCTGCTAATTGAGCAACTAAGCTTACCCACACCAAAGCTACCATGTTGGGGTCCAACATCAACTAGCTTTCCCCATGGAGATAACTTTAAGTTTAACAAAAACCATCCTCAAGAAGAAGAAGAAGAAAGCAATGTTACAAGAATGGCAATAGAAGTTGAGATGTCCAAAGAGGAGGTTCGAATTCAGGGTAAGAGAGATGGCATCAAAGATGAGTTGCAGCGAAGCTATGGCCATGAGGAAGATCTGTTGGAGTTCGGAAGCCATGGAAATAGCAGCATTGATGAGCCATGTTGCAGTCCCAGTGCTCAAAGCTTGCTCCTGTCTGGAGACTCCAAGCATGACTTTGTTTTGTCATCAGGGAGATGGACCATAGATCCAGAGGCAGAATCCAAGACTATCAAACCAACCATTGATCAAGAGTTTGAGCAGTACTTTTCTGTGCTTTTGCCGTCCTTCGATCCCTGA

Protein sequence

MRRQKKAVKGKTCHRTSYDSQEGRMKITRRRCTASRPRIGRNHVFLSLSQGENWLPVLCFHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTSTSFPHGDNFKFNKNHPQEEEEESNVTRMAIEVEMSKEEVRIQGKRDGIKDELQRSYGHEEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP

Homology

[Close]

BLAST of Spg013559 vs. NCBI nr
Match: KAG6603645.1 (Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266.9 bits (681), Expect = 1.6e-67
Identity = 153/255 (60.00%), Postives = 173/255 (67.84%), Query Frame = 0


Query: 15  RTSYDSQEGRMKITRRRCTASRPRIG---------------------------------R 74
           RTS DSQEG + I RRR  ASR  +G                                 +
Sbjct: 5   RTSDDSQEGCIMIRRRRRRASRQALGGIMCILLPRPQPDASGSCLPPISISLSSPTMDQK 64

Query: 75  NHVFLSLSQGENWLPVLCFHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST-- 134
           NH     S G        F GFQPW+T  FDVKKKRKLL EQLSLPTPKLPCWGP+S+  
Sbjct: 65  NHTRHHPSHGGTH----SFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 124

Query: 135 SFPHG-DNFKFNKNHPQEEEEESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYGHE 194
           SFP+G D+FKFNK  P +EE ES++T+MA E  +MS EEVRIQG++DGIKD+L  +YGHE
Sbjct: 125 SFPYGEDSFKFNKKRP-KEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHE 184

Query: 195 EDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQ 233
           EDLLEFGSHGNSSI E CCS S Q+LLL  DSKHDFVLSSGRW+IDPEAESK I PTIDQ
Sbjct: 185 EDLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIITPTIDQ 244

[Close]

BLAST of Spg013559 vs. NCBI nr
Match: KAG7033829.1 (hypothetical protein SDJN02_03554, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 258.1 bits (658), Expect = 7.4e-65
Identity = 132/177 (74.58%), Postives = 149/177 (84.18%), Query Frame = 0


Query: 60  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQE 119
           F GFQPW+T  FDVKKKRKLL EQLSLPTPKLPCWGP+S+  SFP+G D+ KFNK  P +
Sbjct: 19  FSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSISFPYGEDSLKFNKKRP-K 78

Query: 120 EEEESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYGHEEDLLEFGSHGNSSIDEPC 179
           EE ES++T+MA E  +MS EEVRIQG++DGIKD+L  +YGHEEDLLEFGSHGNSSI E C
Sbjct: 79  EEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEEDLLEFGSHGNSSIYEQC 138

Query: 180 CSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP 233
           CS S Q+LLL  DSKHDFVLSSGRW+IDPEAESK I PTIDQEFEQYFS +LPS DP
Sbjct: 139 CSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIITPTIDQEFEQYFSGILPSLDP 194

[Close]

BLAST of Spg013559 vs. NCBI nr
Match: XP_023544624.1 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.9 bits (642), Expect = 5.3e-63
Identity = 131/177 (74.01%), Postives = 148/177 (83.62%), Query Frame = 0


Query: 60  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQE 119
           F GFQPW+T  FDVKKKRKLL EQLSLPTPKLPCWGP+S+  SFP+G D+FKFNK  P +
Sbjct: 19  FPGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSISFPYGEDSFKFNKKRP-K 78

Query: 120 EEEESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYGHEEDLLEFGSHGNSSIDEPC 179
           EE ES++T+MA E  +MS EEVRIQG++DGIKD L  +YGHEEDLLEFG+HGNSSI E C
Sbjct: 79  EEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDNLDLNYGHEEDLLEFGNHGNSSIYEQC 138

Query: 180 CSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP 233
           CS S Q+LLL  DSKHDFVLSSGRW+IDPEAESK I PTIDQEFEQYFS +LP  DP
Sbjct: 139 CSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIITPTIDQEFEQYFSGILP-LDP 193

[Close]

BLAST of Spg013559 vs. NCBI nr
Match: XP_022950730.1 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita moschata])

HSP 1 Score: 249.2 bits (635), Expect = 3.4e-62
Identity = 129/177 (72.88%), Postives = 146/177 (82.49%), Query Frame = 0


Query: 60  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQE 119
           F  FQPW+T  FDVKKKRKLL EQLSLPTPKLPCWGP+S+  SFP+G D+FKFNK  P  
Sbjct: 19  FSDFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSISFPYGEDSFKFNKKRP-- 78

Query: 120 EEEESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYGHEEDLLEFGSHGNSSIDEPC 179
           +E ES++T+MA E  +MS EEVRIQG++DGIKD+L  +YGHEEDLLEFGSHGNSSI E  
Sbjct: 79  KEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEEDLLEFGSHGNSSIYEHY 138

Query: 180 CSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP 233
           CS S Q+LLL  DS HDFVLSSGRW+IDPEAESK I PTIDQEFEQYFS +LPS DP
Sbjct: 139 CSDSTQNLLLPTDSNHDFVLSSGRWSIDPEAESKIITPTIDQEFEQYFSGILPSLDP 193

[Close]

BLAST of Spg013559 vs. NCBI nr
Match: XP_022978296.1 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita maxima])

HSP 1 Score: 246.1 bits (627), Expect = 2.9e-61
Identity = 128/177 (72.32%), Postives = 145/177 (81.92%), Query Frame = 0


Query: 60  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQE 119
           F GFQPW+T  FDVKKKRKLL EQLSLPTPKLPCWGP+S+  SFP+G D+FKFNK  P +
Sbjct: 19  FSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSISFPYGEDSFKFNKKRP-K 78

Query: 120 EEEESNVTRMAIEVEMSKEEVRIQGKRDGIKDELQRSYGHEEDLLEFGSHGNSSIDEPCC 179
           EE ES++T+MA     S EEVRIQG++DGIKD+L  +YGHEEDLLEFGSHGNSSI E CC
Sbjct: 79  EEGESSLTKMA-----STEEVRIQGEKDGIKDKLDLNYGHEEDLLEFGSHGNSSIYEQCC 138

Query: 180 SPSAQSLLLSGDSKHD-FVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP 233
           S S Q+LLL  DS HD FVLSSGRW+IDPEAESK + P IDQEFEQYFS +LPS DP
Sbjct: 139 SDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAIDQEFEQYFSGVLPSLDP 189

[Close]

BLAST of Spg013559 vs. ExPASy Swiss-Prot
Match: Q8S4Q6 (Protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Arabidopsis thaliana OX=3702 GN=FHY1 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.1e-06
Identity = 52/175 (29.71%), Postives = 71/175 (40.57%), Query Frame = 0


Query: 72  DVKKKRKLLIEQLS----LPTPKLPCWGPTSTSFPHGDNFKFNKNHPQEEEEESNVT-RM 131
           +V KKRK   +Q      LP  K  C+   + S     N + +  +       S  +   
Sbjct: 37  EVSKKRKFQTDQSDELSLLPLSKHTCFANVACSENTNGNSEIDTEYSMSSYVNSTTSMEC 96

Query: 132 AIEVEMSKEEVRIQG--KRDGIKDELQRSYGHE----------EDLLEFGSHGNSSIDEP 191
             ++EM +E     G  K    +  L   YG +          E++L          D  
Sbjct: 97  NNDIEMKEESSGSCGEDKMISFESHLDYIYGTQNLEDFSEKVIENILYLDEQEEEEEDAK 156

Query: 192 CCSPSAQSLLLSGDSKHDFVLSSGRWTI--DPEAESKTIKPTIDQEFEQYFSVLL 228
            CS +A            FVLSSGRWT+  D     +T KPTIDQEFEQYFS L+
Sbjct: 157 GCSSNAAK----------FVLSSGRWTVNQDDSTLHETKKPTIDQEFEQYFSTLM 201

[Close]

BLAST of Spg013559 vs. ExPASy Swiss-Prot
Match: A8MR65 (Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE OS=Arabidopsis thaliana OX=3702 GN=FHL PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.4e-04
Identity = 20/36 (55.56%), Postives = 29/36 (80.56%), Query Frame = 0


Query: 193 FVLSSGRWTI-DPEAESKTIKPTIDQEFEQYFSVLL 228
           ++LSS RW++ + +++  T KPTIDQEFEQYFS L+
Sbjct: 165 YILSSARWSVSNQDSKEATTKPTIDQEFEQYFSTLM 200

[Close]

BLAST of Spg013559 vs. ExPASy TrEMBL
Match: A0A6J1GGJ6 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita moschata OX=3662 GN=LOC111453741 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.7e-62
Identity = 129/177 (72.88%), Postives = 146/177 (82.49%), Query Frame = 0


Query: 60  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQE 119
           F  FQPW+T  FDVKKKRKLL EQLSLPTPKLPCWGP+S+  SFP+G D+FKFNK  P  
Sbjct: 19  FSDFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSISFPYGEDSFKFNKKRP-- 78

Query: 120 EEEESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYGHEEDLLEFGSHGNSSIDEPC 179
           +E ES++T+MA E  +MS EEVRIQG++DGIKD+L  +YGHEEDLLEFGSHGNSSI E  
Sbjct: 79  KEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEEDLLEFGSHGNSSIYEHY 138

Query: 180 CSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP 233
           CS S Q+LLL  DS HDFVLSSGRW+IDPEAESK I PTIDQEFEQYFS +LPS DP
Sbjct: 139 CSDSTQNLLLPTDSNHDFVLSSGRWSIDPEAESKIITPTIDQEFEQYFSGILPSLDP 193

[Close]

BLAST of Spg013559 vs. ExPASy TrEMBL
Match: A0A6J1IMA5 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita maxima OX=3661 GN=LOC111478324 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.4e-61
Identity = 128/177 (72.32%), Postives = 145/177 (81.92%), Query Frame = 0


Query: 60  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQE 119
           F GFQPW+T  FDVKKKRKLL EQLSLPTPKLPCWGP+S+  SFP+G D+FKFNK  P +
Sbjct: 19  FSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSISFPYGEDSFKFNKKRP-K 78

Query: 120 EEEESNVTRMAIEVEMSKEEVRIQGKRDGIKDELQRSYGHEEDLLEFGSHGNSSIDEPCC 179
           EE ES++T+MA     S EEVRIQG++DGIKD+L  +YGHEEDLLEFGSHGNSSI E CC
Sbjct: 79  EEGESSLTKMA-----STEEVRIQGEKDGIKDKLDLNYGHEEDLLEFGSHGNSSIYEQCC 138

Query: 180 SPSAQSLLLSGDSKHD-FVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP 233
           S S Q+LLL  DS HD FVLSSGRW+IDPEAESK + P IDQEFEQYFS +LPS DP
Sbjct: 139 SDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAIDQEFEQYFSGVLPSLDP 189

[Close]

BLAST of Spg013559 vs. ExPASy TrEMBL
Match: A0A1S3BJU4 (uncharacterized protein LOC103490381 OS=Cucumis melo OX=3656 GN=LOC103490381 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 2.8e-57
Identity = 121/175 (69.14%), Postives = 140/175 (80.00%), Query Frame = 0


Query: 60  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTSTSFPHG-DNFKFNKNHPQEEE 119
           FHGFQ WNT   DVKKKR+LLI+QLSLPT KLPCWG  S S PHG DNFKFNK    +E 
Sbjct: 33  FHGFQSWNTEAIDVKKKRRLLIDQLSLPTSKLPCWGSRSISIPHGEDNFKFNKK--PKEG 92

Query: 120 EESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYGHEEDLLEFGSHGNSSIDEPCCS 179
           E S +T++ I+  EMS+E+VR+QG+    KD+LQ+SYGHEEDLLEFG+ G+S I E CCS
Sbjct: 93  EGSTLTKITIKGKEMSEEQVRMQGE----KDKLQKSYGHEEDLLEFGTLGHSCIYEECCS 152

Query: 180 PSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP 233
            SAQSLLL  DSK +FVLSSGRW++D E ESKT+KPTIDQEFEQYFSVLLPS DP
Sbjct: 153 GSAQSLLLPTDSKQNFVLSSGRWSVDSETESKTVKPTIDQEFEQYFSVLLPSLDP 201

[Close]

BLAST of Spg013559 vs. ExPASy TrEMBL
Match: A0A0A0KZL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296180 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 4.1e-53
Identity = 121/188 (64.36%), Postives = 137/188 (72.87%), Query Frame = 0


Query: 61  HGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTSTSFPHG-DNFKFNKNHPQEEE- 120
           HG Q WNT   DVK KR+LLI+QLSLPT KLP WGP S S PHG DNFKFN + PQEEE 
Sbjct: 34  HGCQSWNTEAVDVKNKRRLLIDQLSLPTSKLPRWGPRSISIPHGEDNFKFN-DQPQEEEQ 93

Query: 121 ------------EESNVTRMAIE--VEMSKEEVRIQGKRDGIKDELQRSYGHEEDLLEFG 180
                       EES +T++AI+   EMS+E+VR+QG     KD+LQ+SYGHEEDLLEFG
Sbjct: 94  EEGEGEGGEGEGEESTLTKIAIDKSKEMSEEQVRMQGG----KDKLQKSYGHEEDLLEFG 153

Query: 181 SHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFS 233
           S     I E CCS SAQ+LLL  DSK +FVLSSGRW++D E ESK IKPTIDQEFEQYFS
Sbjct: 154 SREYGCIYEECCSGSAQNLLLPTDSKQNFVLSSGRWSVDTETESKPIKPTIDQEFEQYFS 213

[Close]

BLAST of Spg013559 vs. ExPASy TrEMBL
Match: A0A6J1CPJ7 (uncharacterized protein LOC111013556 OS=Momordica charantia OX=3673 GN=LOC111013556 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 3.0e-43
Identity = 111/175 (63.43%), Postives = 123/175 (70.29%), Query Frame = 0


Query: 60  FHGFQPWNTSGFDVKKKRKLLI--EQLSLPTPKLPCWGPT-STSFPHGDNFKFNKNHPQE 119
           F GFQPWNT GFDVKKKRKLLI  EQLS PTPKLP WGPT S SFP+G NFKFN+N  ++
Sbjct: 16  FPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPSVSFPYGGNFKFNQNPQKD 75

Query: 120 -EEEESNVTRMAIEV-EMSKEEVRIQGKRDGIKDELQRSYGHEEDLLEFGSHGNSSIDEP 179
            EEEE N+T+ A+EV E+SK E  ++         L  SYGH EDLLEFG     S DE 
Sbjct: 76  VEEEEINLTKRAMEVKEISKLEALME-------SGLHISYGHGEDLLEFG-----STDEE 135

Query: 180 CCSPSAQSLLLSGDSKHDFVLSSGRWTIDP--EAESKTIKPTIDQEFEQYFSVLL 228
           C            DSKHDFVLSSGRW +DP  EAESKT+KPTIDQEFEQYFSVLL
Sbjct: 136 CYR----------DSKHDFVLSSGRWNVDPPSEAESKTLKPTIDQEFEQYFSVLL 168

[Close]

BLAST of Spg013559 vs. TAIR 10
Match: AT2G37678.1 (far-red elongated hypocotyl 1 )

HSP 1 Score: 52.4 bits (124), Expect = 5.8e-07
Identity = 52/175 (29.71%), Postives = 71/175 (40.57%), Query Frame = 0


Query: 72  DVKKKRKLLIEQLS----LPTPKLPCWGPTSTSFPHGDNFKFNKNHPQEEEEESNVT-RM 131
           +V KKRK   +Q      LP  K  C+   + S     N + +  +       S  +   
Sbjct: 37  EVSKKRKFQTDQSDELSLLPLSKHTCFANVACSENTNGNSEIDTEYSMSSYVNSTTSMEC 96

Query: 132 AIEVEMSKEEVRIQG--KRDGIKDELQRSYGHE----------EDLLEFGSHGNSSIDEP 191
             ++EM +E     G  K    +  L   YG +          E++L          D  
Sbjct: 97  NNDIEMKEESSGSCGEDKMISFESHLDYIYGTQNLEDFSEKVIENILYLDEQEEEEEDAK 156

Query: 192 CCSPSAQSLLLSGDSKHDFVLSSGRWTI--DPEAESKTIKPTIDQEFEQYFSVLL 228
            CS +A            FVLSSGRWT+  D     +T KPTIDQEFEQYFS L+
Sbjct: 157 GCSSNAAK----------FVLSSGRWTVNQDDSTLHETKKPTIDQEFEQYFSTLM 201

[Close]

BLAST of Spg013559 vs. TAIR 10
Match: AT5G02200.1 (far-red-elongated hypocotyl1-like )

HSP 1 Score: 47.0 bits (110), Expect = 2.4e-05
Identity = 20/36 (55.56%), Postives = 29/36 (80.56%), Query Frame = 0


Query: 193 FVLSSGRWTI-DPEAESKTIKPTIDQEFEQYFSVLL 228
           ++LSS RW++ + +++  T KPTIDQEFEQYFS L+
Sbjct: 145 YILSSARWSVSNQDSKEATTKPTIDQEFEQYFSTLM 180

[Close]

BLAST of Spg013559 vs. TAIR 10
Match: AT5G02200.2 (far-red-elongated hypocotyl1-like )

HSP 1 Score: 47.0 bits (110), Expect = 2.4e-05
Identity = 20/36 (55.56%), Postives = 29/36 (80.56%), Query Frame = 0


Query: 193 FVLSSGRWTI-DPEAESKTIKPTIDQEFEQYFSVLL 228
           ++LSS RW++ + +++  T KPTIDQEFEQYFS L+
Sbjct: 165 YILSSARWSVSNQDSKEATTKPTIDQEFEQYFSTLM 200

The following BLAST results are available for this feature:

BLAST of Spg013559 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603645.1	1.6e-67	60.00	Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein, partial [Cucurbita argyrospe...	[more]
KAG7033829.1	7.4e-65	74.58	hypothetical protein SDJN02_03554, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023544624.1	5.3e-63	74.01	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita pepo subsp. pepo]	[more]
XP_022950730.1	3.4e-62	72.88	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita moschata]	[more]
XP_022978296.1	2.9e-61	72.32	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita maxima]	[more]

BLAST of Spg013559 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S4Q6	8.1e-06	29.71	Protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Arabidopsis thaliana OX=3702 GN=FHY1 PE...	[more]
A8MR65	3.4e-04	55.56	Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE OS=Arabidopsis thaliana OX=3702 GN=FH...	[more]

BLAST of Spg013559 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGJ6	1.7e-62	72.88	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IMA5	1.4e-61	72.32	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3BJU4	2.8e-57	69.14	uncharacterized protein LOC103490381 OS=Cucumis melo OX=3656 GN=LOC103490381 PE=...	[more]
A0A0A0KZL8	4.1e-53	64.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296180 PE=4 SV=1	[more]
A0A6J1CPJ7	3.0e-43	63.43	uncharacterized protein LOC111013556 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Spg013559 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37678.1	5.8e-07	29.71	far-red elongated hypocotyl 1	[more]
AT5G02200.1	2.4e-05	55.56	far-red-elongated hypocotyl1-like	[more]
AT5G02200.2	2.4e-05	55.56	far-red-elongated hypocotyl1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037766	Protein FAR-RED ELONGATED HYPOCOTYL 1	PANTHER	PTHR37723	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 60..133
IPR037766	Protein FAR-RED ELONGATED HYPOCOTYL 1	PANTHER	PTHR37723	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 122..227
None	No IPR available	PANTHER	PTHR37723:SF1	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 60..133
None	No IPR available	PANTHER	PTHR37723:SF1	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 122..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg013559.1	Spg013559.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051457	maintenance of protein location in nucleus
biological_process	GO:0009639	response to red or far red light
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus