Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTTAAACACGTCTTGTGGTTTACAGGCTAATGTTGCTGCTTCAAATAATACAAATCAAGATGATACTATTTACGAAGGTTTAGGAGATATAGGCGGTAGGTCTGATGCATTGAATGGAGATGGGAATGCTTATATCACTGGCAATGAAATGATCTTTAGTTCAGAACAAATGTCTTTGATTTACGAAGAAATGCTTAGTTCAGACCCAATGTCATTCTTTGAGCTGAATGATCTTGAGACTCCATTAAGTTCTTTTGATGTCGTAAATGACCAGGACTTGCAAATCTCAAACTTGAATGCTGCATACAAGCGTTCTAGTGTTATCGAGCAGCCAAGTTTCCCATTTAGTTCTTTTGGAGCTGCCAATCAGCACATTCCTTATGGTCACTATCCCTCTCTGCACAATTCCAATGAACAAATATGCCGCCCTACTGATCTTGGATACCCTGTTGTAGACACGTCTGCTTTCAGCCAGTCTGTCTGGCTGCAGGTACGTAATCATTCTCGATTCGGCAAGTCGGTGAAACTTTTGAAACTAATAAATAACTCACTTTACTCTTTATTCTACAACTTCTTTTACTTAATTTGAACATGTGAACATTTCAGGAAAATATTCCTCCCAACTCAAATGGAGGGATCAGGGATGTAAGCAATGGCTATAAAGCTCCCTGGTCGGATCATGCTTGGAACCCCCCTTGA
mRNA sequence
ATGATCTTAAACACGTCTTGTGGTTTACAGGCTAATGTTGCTGCTTCAAATAATACAAATCAAGATGATACTATTTACGAAGGTTTAGGAGATATAGGCGGTAGGTCTGATGCATTGAATGGAGATGGGAATGCTTATATCACTGGCAATGAAATGATCTTTAGTTCAGAACAAATGTCTTTGATTTACGAAGAAATGCTTAGTTCAGACCCAATGTCATTCTTTGAGCTGAATGATCTTGAGACTCCATTAAGTTCTTTTGATGTCGTAAATGACCAGGACTTGCAAATCTCAAACTTGAATGCTGCATACAAGCGTTCTAGTGTTATCGAGCAGCCAAGTTTCCCATTTAGTTCTTTTGGAGCTGCCAATCAGCACATTCCTTATGGTCACTATCCCTCTCTGCACAATTCCAATGAACAAATATGCCGCCCTACTGATCTTGGATACCCTGTTGTAGACACGTCTGCTTTCAGCCAGTCTGTCTGGCTGCAGGAAAATATTCCTCCCAACTCAAATGGAGGGATCAGGGATGTAAGCAATGGCTATAAAGCTCCCTGGTCGGATCATGCTTGGAACCCCCCTTGA
Coding sequence (CDS)
ATGATCTTAAACACGTCTTGTGGTTTACAGGCTAATGTTGCTGCTTCAAATAATACAAATCAAGATGATACTATTTACGAAGGTTTAGGAGATATAGGCGGTAGGTCTGATGCATTGAATGGAGATGGGAATGCTTATATCACTGGCAATGAAATGATCTTTAGTTCAGAACAAATGTCTTTGATTTACGAAGAAATGCTTAGTTCAGACCCAATGTCATTCTTTGAGCTGAATGATCTTGAGACTCCATTAAGTTCTTTTGATGTCGTAAATGACCAGGACTTGCAAATCTCAAACTTGAATGCTGCATACAAGCGTTCTAGTGTTATCGAGCAGCCAAGTTTCCCATTTAGTTCTTTTGGAGCTGCCAATCAGCACATTCCTTATGGTCACTATCCCTCTCTGCACAATTCCAATGAACAAATATGCCGCCCTACTGATCTTGGATACCCTGTTGTAGACACGTCTGCTTTCAGCCAGTCTGTCTGGCTGCAGGAAAATATTCCTCCCAACTCAAATGGAGGGATCAGGGATGTAAGCAATGGCTATAAAGCTCCCTGGTCGGATCATGCTTGGAACCCCCCTTGA
Protein sequence
MILNTSCGLQANVAASNNTNQDDTIYEGLGDIGGRSDALNGDGNAYITGNEMIFSSEQMSLIYEEMLSSDPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAANQHIPYGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGYKAPWSDHAWNPP
Homology
BLAST of Spg013461 vs. NCBI nr
Match:
XP_022979110.1 (NAC domain-containing protein 82-like [Cucurbita maxima] >XP_022979111.1 NAC domain-containing protein 82-like [Cucurbita maxima] >XP_022979112.1 NAC domain-containing protein 82-like [Cucurbita maxima])
HSP 1 Score: 179.9 bits (455), Expect = 2.2e-41
Identity = 109/192 (56.77%), Postives = 125/192 (65.10%), Query Frame = 0
Query: 8 GLQANVAASNNTNQDDTIYEGLGDIGGRSDA---LNGDGNAYITGNEMIFSSEQM-SLIY 67
G QA V AS +T+Q+D YEGLGD+G RS + DGNAY+TGN I+S EQM + Y
Sbjct: 280 GFQATVPASKHTDQNDPTYEGLGDLGARSQLNANITEDGNAYLTGNGAIYSPEQMFPIYY 339
Query: 68 EEMLSSDPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAA 127
E M SSD M + ELNDL PLS +D Q+S NAAY SSVIEQP F FSSFG A
Sbjct: 340 EAMFSSDQMPYLELNDLNAPLSD----TYRDTQMS--NAAYNCSSVIEQPCFHFSSFGTA 399
Query: 128 NQHIPYGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGY 187
NQH+P YPSLH+S++QIC PTDLGYP + SA S QENI NSNGG SNGY
Sbjct: 400 NQHVPSCQYPSLHHSSDQICHPTDLGYPDANMSASS-----QENIHSNSNGG----SNGY 456
Query: 188 KAPWSDHAWNPP 196
K P DH N P
Sbjct: 460 KPPRLDHDANLP 456
BLAST of Spg013461 vs. NCBI nr
Match:
XP_038882500.1 (NAC domain-containing protein 82 isoform X2 [Benincasa hispida])
HSP 1 Score: 165.6 bits (418), Expect = 4.2e-37
Identity = 100/181 (55.25%), Postives = 121/181 (66.85%), Query Frame = 0
Query: 8 GLQANVAASNNTNQDDTIYEGLGDIGGRSDALNGDGNAYITGNEMIFSSE-QMSLIYEEM 67
G QA+VAAS T+Q DTI++ L D+GG S LNGDGNA +TG+ + SSE + M
Sbjct: 198 GFQASVAASKYTDQTDTIFKDLEDLGGWS-PLNGDGNACVTGHGVTCSSEPTFPFRNKGM 257
Query: 68 LSSDPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAANQH 127
SSD + ELNDL++PLSS +D+Q+S NAAY SS+IEQP FPFSSFGAANQ+
Sbjct: 258 FSSDQRPYLELNDLDSPLSS----TYRDMQMS--NAAYNGSSIIEQPCFPFSSFGAANQN 317
Query: 128 IPYGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGYKAP 187
I YPSLH+SN+QIC PTDLGYP SA QS WLQE PNSN G + G + P
Sbjct: 318 ILSCQYPSLHHSNDQICHPTDLGYPDAHMSASIQSAWLQEIFHPNSNVG---CNGGNEIP 368
BLAST of Spg013461 vs. NCBI nr
Match:
XP_038882498.1 (NAC domain-containing protein 82 isoform X1 [Benincasa hispida] >XP_038882499.1 NAC domain-containing protein 82 isoform X1 [Benincasa hispida])
HSP 1 Score: 165.6 bits (418), Expect = 4.2e-37
Identity = 100/181 (55.25%), Postives = 121/181 (66.85%), Query Frame = 0
Query: 8 GLQANVAASNNTNQDDTIYEGLGDIGGRSDALNGDGNAYITGNEMIFSSE-QMSLIYEEM 67
G QA+VAAS T+Q DTI++ L D+GG S LNGDGNA +TG+ + SSE + M
Sbjct: 277 GFQASVAASKYTDQTDTIFKDLEDLGGWS-PLNGDGNACVTGHGVTCSSEPTFPFRNKGM 336
Query: 68 LSSDPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAANQH 127
SSD + ELNDL++PLSS +D+Q+S NAAY SS+IEQP FPFSSFGAANQ+
Sbjct: 337 FSSDQRPYLELNDLDSPLSS----TYRDMQMS--NAAYNGSSIIEQPCFPFSSFGAANQN 396
Query: 128 IPYGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGYKAP 187
I YPSLH+SN+QIC PTDLGYP SA QS WLQE PNSN G + G + P
Sbjct: 397 ILSCQYPSLHHSNDQICHPTDLGYPDAHMSASIQSAWLQEIFHPNSNVG---CNGGNEIP 447
BLAST of Spg013461 vs. NCBI nr
Match:
XP_022132829.1 (NAC domain-containing protein 82 [Momordica charantia])
HSP 1 Score: 163.7 bits (413), Expect = 1.6e-36
Identity = 100/187 (53.48%), Postives = 116/187 (62.03%), Query Frame = 0
Query: 10 QANVAASNNTNQDDTIYEGLGDIGGRSDALNGDGNAYITGNEMIFSSEQMSLIYEEMLSS 69
QA AASN T+Q+D + + R LNGDGNA + G+E+I++SEQM + M SS
Sbjct: 288 QATAAASNKTDQNDIFTDLELEDVFRLSELNGDGNAEVAGHELIYNSEQMFPNIKAMFSS 347
Query: 70 DPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAANQHIPY 129
F ELNDLE PL S + +Q+SNLNAAY SS EQP FPF SFGAANQH P
Sbjct: 348 GQAPFLELNDLEVPLHS--TSEYEHMQMSNLNAAYSCSSANEQPHFPFISFGAANQHAPS 407
Query: 130 GHYPSLHNSNEQICRPTDLGYPVVD--TSAFSQSVWLQENIPPNSNGGIRDVSNGYKAPW 189
YPSLHNSN+QIC PTD G+P S +QS W QENI NSN G NGYKAPW
Sbjct: 408 CQYPSLHNSNDQICHPTDHGFPDAHMFASTSTQSPWQQENIHHNSNVG----CNGYKAPW 467
Query: 190 -SDHAWN 194
DH N
Sbjct: 468 RHDHNSN 468
BLAST of Spg013461 vs. NCBI nr
Match:
XP_022950312.1 (NAC domain-containing protein 82-like [Cucurbita moschata] >XP_022950313.1 NAC domain-containing protein 82-like [Cucurbita moschata] >XP_022950314.1 NAC domain-containing protein 82-like [Cucurbita moschata])
HSP 1 Score: 161.8 bits (408), Expect = 6.1e-36
Identity = 103/192 (53.65%), Postives = 120/192 (62.50%), Query Frame = 0
Query: 8 GLQANVAASNNTNQDDTIYEGLGDIGG---RSDALNGDGNAYITGNEMIFSSEQMSLIYE 67
G QA V AS +T+Q+D I+ GLG + + + DGNAY+TGN I+SSEQ IY
Sbjct: 281 GFQATVPASKHTDQNDPIFGGLGYLDAWYPLNANITEDGNAYVTGNGAIYSSEQTFPIYN 340
Query: 68 E-MLSSDPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAA 127
E M SSD + ELNDL PLS +D Q+S NA Y SSVIEQP F FSSFGAA
Sbjct: 341 EAMFSSDQRPYLELNDLNAPLSD----TYRDTQMS--NAVYNCSSVIEQPCFHFSSFGAA 400
Query: 128 NQHIPYGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGY 187
NQH+P YPS H+S++QIC PTDLGYP + SA S QENI NSNGG SNGY
Sbjct: 401 NQHVPSCQYPSQHHSSDQICHPTDLGYPDANMSASS-----QENIHSNSNGG----SNGY 457
Query: 188 KAPWSDHAWNPP 196
K P DH N P
Sbjct: 461 KPPRLDHDANLP 457
BLAST of Spg013461 vs. ExPASy TrEMBL
Match:
A0A6J1IMW9 (NAC domain-containing protein 82-like OS=Cucurbita maxima OX=3661 GN=LOC111478846 PE=4 SV=1)
HSP 1 Score: 179.9 bits (455), Expect = 1.0e-41
Identity = 109/192 (56.77%), Postives = 125/192 (65.10%), Query Frame = 0
Query: 8 GLQANVAASNNTNQDDTIYEGLGDIGGRSDA---LNGDGNAYITGNEMIFSSEQM-SLIY 67
G QA V AS +T+Q+D YEGLGD+G RS + DGNAY+TGN I+S EQM + Y
Sbjct: 280 GFQATVPASKHTDQNDPTYEGLGDLGARSQLNANITEDGNAYLTGNGAIYSPEQMFPIYY 339
Query: 68 EEMLSSDPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAA 127
E M SSD M + ELNDL PLS +D Q+S NAAY SSVIEQP F FSSFG A
Sbjct: 340 EAMFSSDQMPYLELNDLNAPLSD----TYRDTQMS--NAAYNCSSVIEQPCFHFSSFGTA 399
Query: 128 NQHIPYGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGY 187
NQH+P YPSLH+S++QIC PTDLGYP + SA S QENI NSNGG SNGY
Sbjct: 400 NQHVPSCQYPSLHHSSDQICHPTDLGYPDANMSASS-----QENIHSNSNGG----SNGY 456
Query: 188 KAPWSDHAWNPP 196
K P DH N P
Sbjct: 460 KPPRLDHDANLP 456
BLAST of Spg013461 vs. ExPASy TrEMBL
Match:
A0A6J1BU77 (NAC domain-containing protein 82 OS=Momordica charantia OX=3673 GN=LOC111005583 PE=4 SV=1)
HSP 1 Score: 163.7 bits (413), Expect = 7.8e-37
Identity = 100/187 (53.48%), Postives = 116/187 (62.03%), Query Frame = 0
Query: 10 QANVAASNNTNQDDTIYEGLGDIGGRSDALNGDGNAYITGNEMIFSSEQMSLIYEEMLSS 69
QA AASN T+Q+D + + R LNGDGNA + G+E+I++SEQM + M SS
Sbjct: 288 QATAAASNKTDQNDIFTDLELEDVFRLSELNGDGNAEVAGHELIYNSEQMFPNIKAMFSS 347
Query: 70 DPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAANQHIPY 129
F ELNDLE PL S + +Q+SNLNAAY SS EQP FPF SFGAANQH P
Sbjct: 348 GQAPFLELNDLEVPLHS--TSEYEHMQMSNLNAAYSCSSANEQPHFPFISFGAANQHAPS 407
Query: 130 GHYPSLHNSNEQICRPTDLGYPVVD--TSAFSQSVWLQENIPPNSNGGIRDVSNGYKAPW 189
YPSLHNSN+QIC PTD G+P S +QS W QENI NSN G NGYKAPW
Sbjct: 408 CQYPSLHNSNDQICHPTDHGFPDAHMFASTSTQSPWQQENIHHNSNVG----CNGYKAPW 467
Query: 190 -SDHAWN 194
DH N
Sbjct: 468 RHDHNSN 468
BLAST of Spg013461 vs. ExPASy TrEMBL
Match:
A0A6J1GFF9 (NAC domain-containing protein 82-like OS=Cucurbita moschata OX=3662 GN=LOC111453432 PE=4 SV=1)
HSP 1 Score: 161.8 bits (408), Expect = 2.9e-36
Identity = 103/192 (53.65%), Postives = 120/192 (62.50%), Query Frame = 0
Query: 8 GLQANVAASNNTNQDDTIYEGLGDIGG---RSDALNGDGNAYITGNEMIFSSEQMSLIYE 67
G QA V AS +T+Q+D I+ GLG + + + DGNAY+TGN I+SSEQ IY
Sbjct: 281 GFQATVPASKHTDQNDPIFGGLGYLDAWYPLNANITEDGNAYVTGNGAIYSSEQTFPIYN 340
Query: 68 E-MLSSDPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAA 127
E M SSD + ELNDL PLS +D Q+S NA Y SSVIEQP F FSSFGAA
Sbjct: 341 EAMFSSDQRPYLELNDLNAPLSD----TYRDTQMS--NAVYNCSSVIEQPCFHFSSFGAA 400
Query: 128 NQHIPYGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGY 187
NQH+P YPS H+S++QIC PTDLGYP + SA S QENI NSNGG SNGY
Sbjct: 401 NQHVPSCQYPSQHHSSDQICHPTDLGYPDANMSASS-----QENIHSNSNGG----SNGY 457
Query: 188 KAPWSDHAWNPP 196
K P DH N P
Sbjct: 461 KPPRLDHDANLP 457
BLAST of Spg013461 vs. ExPASy TrEMBL
Match:
A0A5A7SJN4 (NAC domain-containing protein 82 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1230G00150 PE=4 SV=1)
HSP 1 Score: 149.1 bits (375), Expect = 2.0e-32
Identity = 93/187 (49.73%), Postives = 116/187 (62.03%), Query Frame = 0
Query: 10 QANVAASNNTNQDDTIYEGLGDIGGRSDALNGDGNAYITGNEMIFSSEQMSLIYEEMLSS 69
QA V A +T+Q DTI++ L D+GG S L GD NAY TG+E+ S S + M
Sbjct: 283 QAPVGAPIHTDQVDTIFKDLEDLGGLS-PLKGDENAYETGHEVYSSEPTFSFNNKTMSCL 342
Query: 70 DPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFG-AANQHIP 129
D + E+NDL PLSS +D Q +NA Y SS+IEQP FP+SSFG AANQ++P
Sbjct: 343 DHREYLEMNDLNVPLSS----TYRDRQ--KVNAPYSGSSIIEQPCFPYSSFGAAANQNVP 402
Query: 130 YGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGYKAPWS 189
YPSL++SN+QIC P DL ++ TSA QS W+QEN PN+N G NGYKAPW
Sbjct: 403 SCQYPSLYHSNDQICHPADLD-TLMHTSASIQSAWVQENFHPNANAG----CNGYKAPWL 457
Query: 190 DHAWNPP 196
DH N P
Sbjct: 463 DHDANLP 457
BLAST of Spg013461 vs. ExPASy TrEMBL
Match:
A0A1S3B3A9 (NAC domain-containing protein 82 OS=Cucumis melo OX=3656 GN=LOC103485278 PE=4 SV=1)
HSP 1 Score: 149.1 bits (375), Expect = 2.0e-32
Identity = 93/187 (49.73%), Postives = 116/187 (62.03%), Query Frame = 0
Query: 10 QANVAASNNTNQDDTIYEGLGDIGGRSDALNGDGNAYITGNEMIFSSEQMSLIYEEMLSS 69
QA V A +T+Q DTI++ L D+GG S L GD NAY TG+E+ S S + M
Sbjct: 283 QAPVGAPIHTDQVDTIFKDLEDLGGLS-PLKGDENAYETGHEVYSSEPTFSFNNKTMSCL 342
Query: 70 DPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFG-AANQHIP 129
D + E+NDL PLSS +D Q +NA Y SS+IEQP FP+SSFG AANQ++P
Sbjct: 343 DHREYLEMNDLNVPLSS----TYRDRQ--KVNAPYSGSSIIEQPCFPYSSFGAAANQNVP 402
Query: 130 YGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGYKAPWS 189
YPSL++SN+QIC P DL ++ TSA QS W+QEN PN+N G NGYKAPW
Sbjct: 403 SCQYPSLYHSNDQICHPADLD-TLMHTSASIQSAWVQENFHPNANAG----CNGYKAPWL 457
Query: 190 DHAWNPP 196
DH N P
Sbjct: 463 DHDANLP 457
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022979110.1 | 2.2e-41 | 56.77 | NAC domain-containing protein 82-like [Cucurbita maxima] >XP_022979111.1 NAC dom... | [more] |
XP_038882500.1 | 4.2e-37 | 55.25 | NAC domain-containing protein 82 isoform X2 [Benincasa hispida] | [more] |
XP_038882498.1 | 4.2e-37 | 55.25 | NAC domain-containing protein 82 isoform X1 [Benincasa hispida] >XP_038882499.1 ... | [more] |
XP_022132829.1 | 1.6e-36 | 53.48 | NAC domain-containing protein 82 [Momordica charantia] | [more] |
XP_022950312.1 | 6.1e-36 | 53.65 | NAC domain-containing protein 82-like [Cucurbita moschata] >XP_022950313.1 NAC d... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1IMW9 | 1.0e-41 | 56.77 | NAC domain-containing protein 82-like OS=Cucurbita maxima OX=3661 GN=LOC11147884... | [more] |
A0A6J1BU77 | 7.8e-37 | 53.48 | NAC domain-containing protein 82 OS=Momordica charantia OX=3673 GN=LOC111005583 ... | [more] |
A0A6J1GFF9 | 2.9e-36 | 53.65 | NAC domain-containing protein 82-like OS=Cucurbita moschata OX=3662 GN=LOC111453... | [more] |
A0A5A7SJN4 | 2.0e-32 | 49.73 | NAC domain-containing protein 82 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... | [more] |
A0A1S3B3A9 | 2.0e-32 | 49.73 | NAC domain-containing protein 82 OS=Cucumis melo OX=3656 GN=LOC103485278 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |