Spg013461 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg013461
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNAC domain-containing protein 82-like
Locationscaffold1: 10785188 .. 10785891 (+)
RNA-Seq ExpressionSpg013461
SyntenySpg013461
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTTAAACACGTCTTGTGGTTTACAGGCTAATGTTGCTGCTTCAAATAATACAAATCAAGATGATACTATTTACGAAGGTTTAGGAGATATAGGCGGTAGGTCTGATGCATTGAATGGAGATGGGAATGCTTATATCACTGGCAATGAAATGATCTTTAGTTCAGAACAAATGTCTTTGATTTACGAAGAAATGCTTAGTTCAGACCCAATGTCATTCTTTGAGCTGAATGATCTTGAGACTCCATTAAGTTCTTTTGATGTCGTAAATGACCAGGACTTGCAAATCTCAAACTTGAATGCTGCATACAAGCGTTCTAGTGTTATCGAGCAGCCAAGTTTCCCATTTAGTTCTTTTGGAGCTGCCAATCAGCACATTCCTTATGGTCACTATCCCTCTCTGCACAATTCCAATGAACAAATATGCCGCCCTACTGATCTTGGATACCCTGTTGTAGACACGTCTGCTTTCAGCCAGTCTGTCTGGCTGCAGGTACGTAATCATTCTCGATTCGGCAAGTCGGTGAAACTTTTGAAACTAATAAATAACTCACTTTACTCTTTATTCTACAACTTCTTTTACTTAATTTGAACATGTGAACATTTCAGGAAAATATTCCTCCCAACTCAAATGGAGGGATCAGGGATGTAAGCAATGGCTATAAAGCTCCCTGGTCGGATCATGCTTGGAACCCCCCTTGA

mRNA sequence

ATGATCTTAAACACGTCTTGTGGTTTACAGGCTAATGTTGCTGCTTCAAATAATACAAATCAAGATGATACTATTTACGAAGGTTTAGGAGATATAGGCGGTAGGTCTGATGCATTGAATGGAGATGGGAATGCTTATATCACTGGCAATGAAATGATCTTTAGTTCAGAACAAATGTCTTTGATTTACGAAGAAATGCTTAGTTCAGACCCAATGTCATTCTTTGAGCTGAATGATCTTGAGACTCCATTAAGTTCTTTTGATGTCGTAAATGACCAGGACTTGCAAATCTCAAACTTGAATGCTGCATACAAGCGTTCTAGTGTTATCGAGCAGCCAAGTTTCCCATTTAGTTCTTTTGGAGCTGCCAATCAGCACATTCCTTATGGTCACTATCCCTCTCTGCACAATTCCAATGAACAAATATGCCGCCCTACTGATCTTGGATACCCTGTTGTAGACACGTCTGCTTTCAGCCAGTCTGTCTGGCTGCAGGAAAATATTCCTCCCAACTCAAATGGAGGGATCAGGGATGTAAGCAATGGCTATAAAGCTCCCTGGTCGGATCATGCTTGGAACCCCCCTTGA

Coding sequence (CDS)

ATGATCTTAAACACGTCTTGTGGTTTACAGGCTAATGTTGCTGCTTCAAATAATACAAATCAAGATGATACTATTTACGAAGGTTTAGGAGATATAGGCGGTAGGTCTGATGCATTGAATGGAGATGGGAATGCTTATATCACTGGCAATGAAATGATCTTTAGTTCAGAACAAATGTCTTTGATTTACGAAGAAATGCTTAGTTCAGACCCAATGTCATTCTTTGAGCTGAATGATCTTGAGACTCCATTAAGTTCTTTTGATGTCGTAAATGACCAGGACTTGCAAATCTCAAACTTGAATGCTGCATACAAGCGTTCTAGTGTTATCGAGCAGCCAAGTTTCCCATTTAGTTCTTTTGGAGCTGCCAATCAGCACATTCCTTATGGTCACTATCCCTCTCTGCACAATTCCAATGAACAAATATGCCGCCCTACTGATCTTGGATACCCTGTTGTAGACACGTCTGCTTTCAGCCAGTCTGTCTGGCTGCAGGAAAATATTCCTCCCAACTCAAATGGAGGGATCAGGGATGTAAGCAATGGCTATAAAGCTCCCTGGTCGGATCATGCTTGGAACCCCCCTTGA

Protein sequence

MILNTSCGLQANVAASNNTNQDDTIYEGLGDIGGRSDALNGDGNAYITGNEMIFSSEQMSLIYEEMLSSDPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAANQHIPYGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGYKAPWSDHAWNPP
Homology
BLAST of Spg013461 vs. NCBI nr
Match: XP_022979110.1 (NAC domain-containing protein 82-like [Cucurbita maxima] >XP_022979111.1 NAC domain-containing protein 82-like [Cucurbita maxima] >XP_022979112.1 NAC domain-containing protein 82-like [Cucurbita maxima])

HSP 1 Score: 179.9 bits (455), Expect = 2.2e-41
Identity = 109/192 (56.77%), Postives = 125/192 (65.10%), Query Frame = 0

Query: 8   GLQANVAASNNTNQDDTIYEGLGDIGGRSDA---LNGDGNAYITGNEMIFSSEQM-SLIY 67
           G QA V AS +T+Q+D  YEGLGD+G RS     +  DGNAY+TGN  I+S EQM  + Y
Sbjct: 280 GFQATVPASKHTDQNDPTYEGLGDLGARSQLNANITEDGNAYLTGNGAIYSPEQMFPIYY 339

Query: 68  EEMLSSDPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAA 127
           E M SSD M + ELNDL  PLS       +D Q+S  NAAY  SSVIEQP F FSSFG A
Sbjct: 340 EAMFSSDQMPYLELNDLNAPLSD----TYRDTQMS--NAAYNCSSVIEQPCFHFSSFGTA 399

Query: 128 NQHIPYGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGY 187
           NQH+P   YPSLH+S++QIC PTDLGYP  + SA S     QENI  NSNGG    SNGY
Sbjct: 400 NQHVPSCQYPSLHHSSDQICHPTDLGYPDANMSASS-----QENIHSNSNGG----SNGY 456

Query: 188 KAPWSDHAWNPP 196
           K P  DH  N P
Sbjct: 460 KPPRLDHDANLP 456

BLAST of Spg013461 vs. NCBI nr
Match: XP_038882500.1 (NAC domain-containing protein 82 isoform X2 [Benincasa hispida])

HSP 1 Score: 165.6 bits (418), Expect = 4.2e-37
Identity = 100/181 (55.25%), Postives = 121/181 (66.85%), Query Frame = 0

Query: 8   GLQANVAASNNTNQDDTIYEGLGDIGGRSDALNGDGNAYITGNEMIFSSE-QMSLIYEEM 67
           G QA+VAAS  T+Q DTI++ L D+GG S  LNGDGNA +TG+ +  SSE       + M
Sbjct: 198 GFQASVAASKYTDQTDTIFKDLEDLGGWS-PLNGDGNACVTGHGVTCSSEPTFPFRNKGM 257

Query: 68  LSSDPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAANQH 127
            SSD   + ELNDL++PLSS      +D+Q+S  NAAY  SS+IEQP FPFSSFGAANQ+
Sbjct: 258 FSSDQRPYLELNDLDSPLSS----TYRDMQMS--NAAYNGSSIIEQPCFPFSSFGAANQN 317

Query: 128 IPYGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGYKAP 187
           I    YPSLH+SN+QIC PTDLGYP    SA  QS WLQE   PNSN G    + G + P
Sbjct: 318 ILSCQYPSLHHSNDQICHPTDLGYPDAHMSASIQSAWLQEIFHPNSNVG---CNGGNEIP 368

BLAST of Spg013461 vs. NCBI nr
Match: XP_038882498.1 (NAC domain-containing protein 82 isoform X1 [Benincasa hispida] >XP_038882499.1 NAC domain-containing protein 82 isoform X1 [Benincasa hispida])

HSP 1 Score: 165.6 bits (418), Expect = 4.2e-37
Identity = 100/181 (55.25%), Postives = 121/181 (66.85%), Query Frame = 0

Query: 8   GLQANVAASNNTNQDDTIYEGLGDIGGRSDALNGDGNAYITGNEMIFSSE-QMSLIYEEM 67
           G QA+VAAS  T+Q DTI++ L D+GG S  LNGDGNA +TG+ +  SSE       + M
Sbjct: 277 GFQASVAASKYTDQTDTIFKDLEDLGGWS-PLNGDGNACVTGHGVTCSSEPTFPFRNKGM 336

Query: 68  LSSDPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAANQH 127
            SSD   + ELNDL++PLSS      +D+Q+S  NAAY  SS+IEQP FPFSSFGAANQ+
Sbjct: 337 FSSDQRPYLELNDLDSPLSS----TYRDMQMS--NAAYNGSSIIEQPCFPFSSFGAANQN 396

Query: 128 IPYGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGYKAP 187
           I    YPSLH+SN+QIC PTDLGYP    SA  QS WLQE   PNSN G    + G + P
Sbjct: 397 ILSCQYPSLHHSNDQICHPTDLGYPDAHMSASIQSAWLQEIFHPNSNVG---CNGGNEIP 447

BLAST of Spg013461 vs. NCBI nr
Match: XP_022132829.1 (NAC domain-containing protein 82 [Momordica charantia])

HSP 1 Score: 163.7 bits (413), Expect = 1.6e-36
Identity = 100/187 (53.48%), Postives = 116/187 (62.03%), Query Frame = 0

Query: 10  QANVAASNNTNQDDTIYEGLGDIGGRSDALNGDGNAYITGNEMIFSSEQMSLIYEEMLSS 69
           QA  AASN T+Q+D   +   +   R   LNGDGNA + G+E+I++SEQM    + M SS
Sbjct: 288 QATAAASNKTDQNDIFTDLELEDVFRLSELNGDGNAEVAGHELIYNSEQMFPNIKAMFSS 347

Query: 70  DPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAANQHIPY 129
               F ELNDLE PL S      + +Q+SNLNAAY  SS  EQP FPF SFGAANQH P 
Sbjct: 348 GQAPFLELNDLEVPLHS--TSEYEHMQMSNLNAAYSCSSANEQPHFPFISFGAANQHAPS 407

Query: 130 GHYPSLHNSNEQICRPTDLGYPVVD--TSAFSQSVWLQENIPPNSNGGIRDVSNGYKAPW 189
             YPSLHNSN+QIC PTD G+P      S  +QS W QENI  NSN G     NGYKAPW
Sbjct: 408 CQYPSLHNSNDQICHPTDHGFPDAHMFASTSTQSPWQQENIHHNSNVG----CNGYKAPW 467

Query: 190 -SDHAWN 194
             DH  N
Sbjct: 468 RHDHNSN 468

BLAST of Spg013461 vs. NCBI nr
Match: XP_022950312.1 (NAC domain-containing protein 82-like [Cucurbita moschata] >XP_022950313.1 NAC domain-containing protein 82-like [Cucurbita moschata] >XP_022950314.1 NAC domain-containing protein 82-like [Cucurbita moschata])

HSP 1 Score: 161.8 bits (408), Expect = 6.1e-36
Identity = 103/192 (53.65%), Postives = 120/192 (62.50%), Query Frame = 0

Query: 8   GLQANVAASNNTNQDDTIYEGLGDIGG---RSDALNGDGNAYITGNEMIFSSEQMSLIYE 67
           G QA V AS +T+Q+D I+ GLG +      +  +  DGNAY+TGN  I+SSEQ   IY 
Sbjct: 281 GFQATVPASKHTDQNDPIFGGLGYLDAWYPLNANITEDGNAYVTGNGAIYSSEQTFPIYN 340

Query: 68  E-MLSSDPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAA 127
           E M SSD   + ELNDL  PLS       +D Q+S  NA Y  SSVIEQP F FSSFGAA
Sbjct: 341 EAMFSSDQRPYLELNDLNAPLSD----TYRDTQMS--NAVYNCSSVIEQPCFHFSSFGAA 400

Query: 128 NQHIPYGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGY 187
           NQH+P   YPS H+S++QIC PTDLGYP  + SA S     QENI  NSNGG    SNGY
Sbjct: 401 NQHVPSCQYPSQHHSSDQICHPTDLGYPDANMSASS-----QENIHSNSNGG----SNGY 457

Query: 188 KAPWSDHAWNPP 196
           K P  DH  N P
Sbjct: 461 KPPRLDHDANLP 457

BLAST of Spg013461 vs. ExPASy TrEMBL
Match: A0A6J1IMW9 (NAC domain-containing protein 82-like OS=Cucurbita maxima OX=3661 GN=LOC111478846 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.0e-41
Identity = 109/192 (56.77%), Postives = 125/192 (65.10%), Query Frame = 0

Query: 8   GLQANVAASNNTNQDDTIYEGLGDIGGRSDA---LNGDGNAYITGNEMIFSSEQM-SLIY 67
           G QA V AS +T+Q+D  YEGLGD+G RS     +  DGNAY+TGN  I+S EQM  + Y
Sbjct: 280 GFQATVPASKHTDQNDPTYEGLGDLGARSQLNANITEDGNAYLTGNGAIYSPEQMFPIYY 339

Query: 68  EEMLSSDPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAA 127
           E M SSD M + ELNDL  PLS       +D Q+S  NAAY  SSVIEQP F FSSFG A
Sbjct: 340 EAMFSSDQMPYLELNDLNAPLSD----TYRDTQMS--NAAYNCSSVIEQPCFHFSSFGTA 399

Query: 128 NQHIPYGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGY 187
           NQH+P   YPSLH+S++QIC PTDLGYP  + SA S     QENI  NSNGG    SNGY
Sbjct: 400 NQHVPSCQYPSLHHSSDQICHPTDLGYPDANMSASS-----QENIHSNSNGG----SNGY 456

Query: 188 KAPWSDHAWNPP 196
           K P  DH  N P
Sbjct: 460 KPPRLDHDANLP 456

BLAST of Spg013461 vs. ExPASy TrEMBL
Match: A0A6J1BU77 (NAC domain-containing protein 82 OS=Momordica charantia OX=3673 GN=LOC111005583 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 7.8e-37
Identity = 100/187 (53.48%), Postives = 116/187 (62.03%), Query Frame = 0

Query: 10  QANVAASNNTNQDDTIYEGLGDIGGRSDALNGDGNAYITGNEMIFSSEQMSLIYEEMLSS 69
           QA  AASN T+Q+D   +   +   R   LNGDGNA + G+E+I++SEQM    + M SS
Sbjct: 288 QATAAASNKTDQNDIFTDLELEDVFRLSELNGDGNAEVAGHELIYNSEQMFPNIKAMFSS 347

Query: 70  DPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAANQHIPY 129
               F ELNDLE PL S      + +Q+SNLNAAY  SS  EQP FPF SFGAANQH P 
Sbjct: 348 GQAPFLELNDLEVPLHS--TSEYEHMQMSNLNAAYSCSSANEQPHFPFISFGAANQHAPS 407

Query: 130 GHYPSLHNSNEQICRPTDLGYPVVD--TSAFSQSVWLQENIPPNSNGGIRDVSNGYKAPW 189
             YPSLHNSN+QIC PTD G+P      S  +QS W QENI  NSN G     NGYKAPW
Sbjct: 408 CQYPSLHNSNDQICHPTDHGFPDAHMFASTSTQSPWQQENIHHNSNVG----CNGYKAPW 467

Query: 190 -SDHAWN 194
             DH  N
Sbjct: 468 RHDHNSN 468

BLAST of Spg013461 vs. ExPASy TrEMBL
Match: A0A6J1GFF9 (NAC domain-containing protein 82-like OS=Cucurbita moschata OX=3662 GN=LOC111453432 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.9e-36
Identity = 103/192 (53.65%), Postives = 120/192 (62.50%), Query Frame = 0

Query: 8   GLQANVAASNNTNQDDTIYEGLGDIGG---RSDALNGDGNAYITGNEMIFSSEQMSLIYE 67
           G QA V AS +T+Q+D I+ GLG +      +  +  DGNAY+TGN  I+SSEQ   IY 
Sbjct: 281 GFQATVPASKHTDQNDPIFGGLGYLDAWYPLNANITEDGNAYVTGNGAIYSSEQTFPIYN 340

Query: 68  E-MLSSDPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFGAA 127
           E M SSD   + ELNDL  PLS       +D Q+S  NA Y  SSVIEQP F FSSFGAA
Sbjct: 341 EAMFSSDQRPYLELNDLNAPLSD----TYRDTQMS--NAVYNCSSVIEQPCFHFSSFGAA 400

Query: 128 NQHIPYGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGY 187
           NQH+P   YPS H+S++QIC PTDLGYP  + SA S     QENI  NSNGG    SNGY
Sbjct: 401 NQHVPSCQYPSQHHSSDQICHPTDLGYPDANMSASS-----QENIHSNSNGG----SNGY 457

Query: 188 KAPWSDHAWNPP 196
           K P  DH  N P
Sbjct: 461 KPPRLDHDANLP 457

BLAST of Spg013461 vs. ExPASy TrEMBL
Match: A0A5A7SJN4 (NAC domain-containing protein 82 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1230G00150 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.0e-32
Identity = 93/187 (49.73%), Postives = 116/187 (62.03%), Query Frame = 0

Query: 10  QANVAASNNTNQDDTIYEGLGDIGGRSDALNGDGNAYITGNEMIFSSEQMSLIYEEMLSS 69
           QA V A  +T+Q DTI++ L D+GG S  L GD NAY TG+E+  S    S   + M   
Sbjct: 283 QAPVGAPIHTDQVDTIFKDLEDLGGLS-PLKGDENAYETGHEVYSSEPTFSFNNKTMSCL 342

Query: 70  DPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFG-AANQHIP 129
           D   + E+NDL  PLSS      +D Q   +NA Y  SS+IEQP FP+SSFG AANQ++P
Sbjct: 343 DHREYLEMNDLNVPLSS----TYRDRQ--KVNAPYSGSSIIEQPCFPYSSFGAAANQNVP 402

Query: 130 YGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGYKAPWS 189
              YPSL++SN+QIC P DL   ++ TSA  QS W+QEN  PN+N G     NGYKAPW 
Sbjct: 403 SCQYPSLYHSNDQICHPADLD-TLMHTSASIQSAWVQENFHPNANAG----CNGYKAPWL 457

Query: 190 DHAWNPP 196
           DH  N P
Sbjct: 463 DHDANLP 457

BLAST of Spg013461 vs. ExPASy TrEMBL
Match: A0A1S3B3A9 (NAC domain-containing protein 82 OS=Cucumis melo OX=3656 GN=LOC103485278 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.0e-32
Identity = 93/187 (49.73%), Postives = 116/187 (62.03%), Query Frame = 0

Query: 10  QANVAASNNTNQDDTIYEGLGDIGGRSDALNGDGNAYITGNEMIFSSEQMSLIYEEMLSS 69
           QA V A  +T+Q DTI++ L D+GG S  L GD NAY TG+E+  S    S   + M   
Sbjct: 283 QAPVGAPIHTDQVDTIFKDLEDLGGLS-PLKGDENAYETGHEVYSSEPTFSFNNKTMSCL 342

Query: 70  DPMSFFELNDLETPLSSFDVVNDQDLQISNLNAAYKRSSVIEQPSFPFSSFG-AANQHIP 129
           D   + E+NDL  PLSS      +D Q   +NA Y  SS+IEQP FP+SSFG AANQ++P
Sbjct: 343 DHREYLEMNDLNVPLSS----TYRDRQ--KVNAPYSGSSIIEQPCFPYSSFGAAANQNVP 402

Query: 130 YGHYPSLHNSNEQICRPTDLGYPVVDTSAFSQSVWLQENIPPNSNGGIRDVSNGYKAPWS 189
              YPSL++SN+QIC P DL   ++ TSA  QS W+QEN  PN+N G     NGYKAPW 
Sbjct: 403 SCQYPSLYHSNDQICHPADLD-TLMHTSASIQSAWVQENFHPNANAG----CNGYKAPWL 457

Query: 190 DHAWNPP 196
           DH  N P
Sbjct: 463 DHDANLP 457

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022979110.12.2e-4156.77NAC domain-containing protein 82-like [Cucurbita maxima] >XP_022979111.1 NAC dom... [more]
XP_038882500.14.2e-3755.25NAC domain-containing protein 82 isoform X2 [Benincasa hispida][more]
XP_038882498.14.2e-3755.25NAC domain-containing protein 82 isoform X1 [Benincasa hispida] >XP_038882499.1 ... [more]
XP_022132829.11.6e-3653.48NAC domain-containing protein 82 [Momordica charantia][more]
XP_022950312.16.1e-3653.65NAC domain-containing protein 82-like [Cucurbita moschata] >XP_022950313.1 NAC d... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1IMW91.0e-4156.77NAC domain-containing protein 82-like OS=Cucurbita maxima OX=3661 GN=LOC11147884... [more]
A0A6J1BU777.8e-3753.48NAC domain-containing protein 82 OS=Momordica charantia OX=3673 GN=LOC111005583 ... [more]
A0A6J1GFF92.9e-3653.65NAC domain-containing protein 82-like OS=Cucurbita moschata OX=3662 GN=LOC111453... [more]
A0A5A7SJN42.0e-3249.73NAC domain-containing protein 82 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3B3A92.0e-3249.73NAC domain-containing protein 82 OS=Cucumis melo OX=3656 GN=LOC103485278 PE=4 SV... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg013461.1Spg013461.1mRNA