Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCAATCACTTCGAAAATGTTTTTAGGAGTCTCAGCTCTGATTCTCTTAGGGTTTCATTTTATCGCCTTCCAAACACATGCTCGACCTATTCCTCCGACTGGACCAAATCAAAGGACATCGGACTCATCTCCTCCGCCACCTTCATACTCTAGTTTAGAGAACGAGTCAAAGTTCAACTTCGGGGCGTATTCAAAAGGAGCATCCAAATCGAAGTTCAACTTTGTAATGTATCCGAAAGGTGTTCCTATTCCTCCATCTGGACCAAGTCAAAGGACATCAGACTCATTAACTCCGCCCCCTCCATCCTTTATTTTGGAGAAGGAATCAAAGTTCAATTTCAAAATGTATCCGAAAGGCACACCGATCCCTCCATCTGGACCGAGTCAAAGGACATCAGACCCATCTCCTCCACCACCAAAGTTCAATTTCAAAATGTATCCGAAAGACACACCGATCCCTCCATCTGGACCGAGTCAAAGGACATCAGACTCATCTCCTCCACCACCGCAGCTGTGA
mRNA sequence
ATGGCCTCAATCACTTCGAAAATGTTTTTAGGAGTCTCAGCTCTGATTCTCTTAGGGTTTCATTTTATCGCCTTCCAAACACATGCTCGACCTATTCCTCCGACTGGACCAAATCAAAGGACATCGGACTCATCTCCTCCGCCACCTTCATACTCTAGTTTAGAGAACGAGTCAAAGTTCAACTTCGGGGCGTATTCAAAAGGAGCATCCAAATCGAAGTTCAACTTTGTAATGTATCCGAAAGGTGTTCCTATTCCTCCATCTGGACCAAGTCAAAGGACATCAGACTCATTAACTCCGCCCCCTCCATCCTTTATTTTGGAGAAGGAATCAAAGTTCAATTTCAAAATGTATCCGAAAGGCACACCGATCCCTCCATCTGGACCGAGTCAAAGGACATCAGACCCATCTCCTCCACCACCAAAGTTCAATTTCAAAATGTATCCGAAAGACACACCGATCCCTCCATCTGGACCGAGTCAAAGGACATCAGACTCATCTCCTCCACCACCGCAGCTGTGA
Coding sequence (CDS)
ATGGCCTCAATCACTTCGAAAATGTTTTTAGGAGTCTCAGCTCTGATTCTCTTAGGGTTTCATTTTATCGCCTTCCAAACACATGCTCGACCTATTCCTCCGACTGGACCAAATCAAAGGACATCGGACTCATCTCCTCCGCCACCTTCATACTCTAGTTTAGAGAACGAGTCAAAGTTCAACTTCGGGGCGTATTCAAAAGGAGCATCCAAATCGAAGTTCAACTTTGTAATGTATCCGAAAGGTGTTCCTATTCCTCCATCTGGACCAAGTCAAAGGACATCAGACTCATTAACTCCGCCCCCTCCATCCTTTATTTTGGAGAAGGAATCAAAGTTCAATTTCAAAATGTATCCGAAAGGCACACCGATCCCTCCATCTGGACCGAGTCAAAGGACATCAGACCCATCTCCTCCACCACCAAAGTTCAATTTCAAAATGTATCCGAAAGACACACCGATCCCTCCATCTGGACCGAGTCAAAGGACATCAGACTCATCTCCTCCACCACCGCAGCTGTGA
Protein sequence
MASITSKMFLGVSALILLGFHFIAFQTHARPIPPTGPNQRTSDSSPPPPSYSSLENESKFNFGAYSKGASKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPPPSFILEKESKFNFKMYPKGTPIPPSGPSQRTSDPSPPPPKFNFKMYPKDTPIPPSGPSQRTSDSSPPPPQL
Homology
BLAST of Spg013433 vs. NCBI nr
Match:
XP_011654399.2 (proline-rich protein HaeIII subfamily 1-like [Cucumis sativus])
HSP 1 Score: 157.5 bits (397), Expect = 1.0e-34
Identity = 101/171 (59.06%), Postives = 110/171 (64.33%), Query Frame = 0
Query: 8 MFLGVSALILLGFHFIAFQTHARPIPPTGPNQRTSDSSPPPPSYSSLENESKFNFGAYSK 67
M LG S L+LLGFH IA QTHARPIPPTG N TSD +PPPPS S
Sbjct: 1 MILGASFLVLLGFHLIAVQTHARPIPPTGSNPTTSDPTPPPPSNSI-------------- 60
Query: 68 GASKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPPPSFILEKESKFNFKMYPKGTPIPPS 127
F +Y KG+ IPPSGPSQRTSDS +PPPP IL+K KF+F MYPKG PIPPS
Sbjct: 61 --------FKVYSKGI-IPPSGPSQRTSDS-SPPPPFNILQK--KFDFGMYPKGIPIPPS 120
Query: 128 GPSQRTSDPSPPPPK-------FNFKMYPKDTPIPPSGPSQRTSDSSPPPP 172
GPSQRTSD SPPPP F F MY + PIPPSG + RTS S PPPP
Sbjct: 121 GPSQRTSDSSPPPPSNFFHHNTFGFGMYQRRVPIPPSGLNPRTSYSPPPPP 145
BLAST of Spg013433 vs. NCBI nr
Match:
KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 156.8 bits (395), Expect = 1.7e-34
Identity = 101/186 (54.30%), Postives = 109/186 (58.60%), Query Frame = 0
Query: 31 PIPPTGPNQRTSDSSPPPPSYSS--LENESKFNFGAYSKGA------------------- 90
PIPP+GP+QRTSD PPPP SS L +SK NFG KG
Sbjct: 130 PIPPSGPSQRTSDYPPPPPRASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSNYPPPPP 189
Query: 91 ---------SKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPP--PSFILEKESKFNFKMY 150
++SK NF M PKGVPIPPSGPSQRTSD PPP SFIL +SK NF M
Sbjct: 190 LHASSVILNTQSKINFGMLPKGVPIPPSGPSQRTSDYPPPPPHASSFILNTQSKINFGML 249
Query: 151 PKGTPIPPSGPSQRTSDPSPPPP-----------KFNFKMYPKDTPIPPSGPSQRTSDSS 174
PKG PIPPSGPSQRTSD PPPP K NF M PK PIPPSGPSQRTS+
Sbjct: 250 PKGVPIPPSGPSQRTSDYPPPPPHASSVILNTQSKINFGMLPKGVPIPPSGPSQRTSNYP 309
BLAST of Spg013433 vs. NCBI nr
Match:
XP_008442275.1 (PREDICTED: proline-rich protein HaeIII subfamily 1-like [Cucumis melo] >KAA0041826.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK05348.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])
HSP 1 Score: 150.2 bits (378), Expect = 1.6e-32
Identity = 97/171 (56.73%), Postives = 110/171 (64.33%), Query Frame = 0
Query: 1 MASITSKMFLGVSALILLGFHFIAFQTHARPIPPTGPNQRTSDSSPPPPSYSSLENESKF 60
MAS + M LG L+LLGFH IA QTHARPIPP+G N TSD PPPP
Sbjct: 1 MASKSWIMMLGGWLLVLLGFHLIAVQTHARPIPPSGSNPTTSDPPPPPP----------- 60
Query: 61 NFGAYSKGASKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPPPSFILEKESKFNFKMYPK 120
S F F MYPKG+ +PPSGPSQRTSDS +PPPP IL ++KF+F MYPK
Sbjct: 61 -----------SNFIFKMYPKGI-VPPSGPSQRTSDS-SPPPPFNIL--QNKFDFGMYPK 120
Query: 121 GTPIPPSGPSQRTSDPSPPPPKFNFKMYPKDTPIPPSGPSQRTSDSSPPPP 172
G +PPSGPSQRTSD SPPPP F+ P+PPSGP+ TSDS PPPP
Sbjct: 121 GI-VPPSGPSQRTSDSSPPPPSNFFEERFGRVPVPPSGPNPTTSDSPPPPP 144
BLAST of Spg013433 vs. NCBI nr
Match:
XP_022967687.1 (actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima])
HSP 1 Score: 148.7 bits (374), Expect = 4.7e-32
Identity = 97/179 (54.19%), Postives = 104/179 (58.10%), Query Frame = 0
Query: 31 PIPPTGPNQRTSDSSPPPPSYSS--LENESKFNFGAYSKGA------------------- 90
PIPP+GP+QRTSD PPPP SS L +SK NFG KG
Sbjct: 290 PIPPSGPSQRTSDYPPPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPP 349
Query: 91 --------SKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPP--PSFILEKESKFNFKMYP 150
+SK M P+GVPIPP G SQRTSD PPP S IL K+SK NF M P
Sbjct: 350 RASSVILNKQSKIYLGMLPRGVPIPPPGLSQRTSDYPHPPPHASSVILNKQSKINFGMLP 409
Query: 151 KGTPIPPSGPSQRTSDPSPPP-----PKFNFKMYPKDTPIPPSGPSQRTSDSSPPPPQL 174
KG PIPPSGPS RTSD PPP PK NF M PKD PIPPSGPSQRTSD PPPP +
Sbjct: 410 KGVPIPPSGPSHRTSDYPPPPPHVLWPKINFGMLPKDVPIPPSGPSQRTSDYPPPPPHV 468
BLAST of Spg013433 vs. NCBI nr
Match:
CAB4314850.1 (unnamed protein product [Prunus armeniaca])
HSP 1 Score: 124.0 bits (310), Expect = 1.2e-24
Identity = 80/142 (56.34%), Postives = 82/142 (57.75%), Query Frame = 0
Query: 31 PIPPTGPNQRTSDSSPPPPSYSSLENESKFNFGAYSKGASKSKFNFVMYPKGVPIPPSGP 90
PIPP+GP+ RTSD PPPP FNF PK PIPPSGP
Sbjct: 101 PIPPSGPSGRTSDPPPPPP-----------------------PFNFGTLPKYTPIPPSGP 160
Query: 91 SQRTSDSLTPPPPSFILEKESKFNFKMYPKGTPIPPSGPSQRTSD-PSPPPPKFNFKMYP 150
S RTSD PPPP FNF PK TPIPPSGPS RTSD P PPPP FNF P
Sbjct: 161 SGRTSDPPPPPPP--------PFNFGTLPKYTPIPPSGPSGRTSDPPPPPPPPFNFGTLP 211
Query: 151 KDTPIPPSGPSQRTSDSSPPPP 172
K TPIPPSGPS RTSD PPPP
Sbjct: 221 KYTPIPPSGPSGRTSDPPPPPP 211
BLAST of Spg013433 vs. ExPASy TrEMBL
Match:
A0A5D3C2C7 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00150 PE=4 SV=1)
HSP 1 Score: 150.2 bits (378), Expect = 7.9e-33
Identity = 97/171 (56.73%), Postives = 110/171 (64.33%), Query Frame = 0
Query: 1 MASITSKMFLGVSALILLGFHFIAFQTHARPIPPTGPNQRTSDSSPPPPSYSSLENESKF 60
MAS + M LG L+LLGFH IA QTHARPIPP+G N TSD PPPP
Sbjct: 1 MASKSWIMMLGGWLLVLLGFHLIAVQTHARPIPPSGSNPTTSDPPPPPP----------- 60
Query: 61 NFGAYSKGASKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPPPSFILEKESKFNFKMYPK 120
S F F MYPKG+ +PPSGPSQRTSDS +PPPP IL ++KF+F MYPK
Sbjct: 61 -----------SNFIFKMYPKGI-VPPSGPSQRTSDS-SPPPPFNIL--QNKFDFGMYPK 120
Query: 121 GTPIPPSGPSQRTSDPSPPPPKFNFKMYPKDTPIPPSGPSQRTSDSSPPPP 172
G +PPSGPSQRTSD SPPPP F+ P+PPSGP+ TSDS PPPP
Sbjct: 121 GI-VPPSGPSQRTSDSSPPPPSNFFEERFGRVPVPPSGPNPTTSDSPPPPP 144
BLAST of Spg013433 vs. ExPASy TrEMBL
Match:
A0A1S3B4V4 (proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo OX=3656 GN=LOC103486183 PE=4 SV=1)
HSP 1 Score: 150.2 bits (378), Expect = 7.9e-33
Identity = 97/171 (56.73%), Postives = 110/171 (64.33%), Query Frame = 0
Query: 1 MASITSKMFLGVSALILLGFHFIAFQTHARPIPPTGPNQRTSDSSPPPPSYSSLENESKF 60
MAS + M LG L+LLGFH IA QTHARPIPP+G N TSD PPPP
Sbjct: 1 MASKSWIMMLGGWLLVLLGFHLIAVQTHARPIPPSGSNPTTSDPPPPPP----------- 60
Query: 61 NFGAYSKGASKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPPPSFILEKESKFNFKMYPK 120
S F F MYPKG+ +PPSGPSQRTSDS +PPPP IL ++KF+F MYPK
Sbjct: 61 -----------SNFIFKMYPKGI-VPPSGPSQRTSDS-SPPPPFNIL--QNKFDFGMYPK 120
Query: 121 GTPIPPSGPSQRTSDPSPPPPKFNFKMYPKDTPIPPSGPSQRTSDSSPPPP 172
G +PPSGPSQRTSD SPPPP F+ P+PPSGP+ TSDS PPPP
Sbjct: 121 GI-VPPSGPSQRTSDSSPPPPSNFFEERFGRVPVPPSGPNPTTSDSPPPPP 144
BLAST of Spg013433 vs. ExPASy TrEMBL
Match:
A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)
HSP 1 Score: 148.7 bits (374), Expect = 2.3e-32
Identity = 97/179 (54.19%), Postives = 104/179 (58.10%), Query Frame = 0
Query: 31 PIPPTGPNQRTSDSSPPPPSYSS--LENESKFNFGAYSKGA------------------- 90
PIPP+GP+QRTSD PPPP SS L +SK NFG KG
Sbjct: 290 PIPPSGPSQRTSDYPPPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPP 349
Query: 91 --------SKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPP--PSFILEKESKFNFKMYP 150
+SK M P+GVPIPP G SQRTSD PPP S IL K+SK NF M P
Sbjct: 350 RASSVILNKQSKIYLGMLPRGVPIPPPGLSQRTSDYPHPPPHASSVILNKQSKINFGMLP 409
Query: 151 KGTPIPPSGPSQRTSDPSPPP-----PKFNFKMYPKDTPIPPSGPSQRTSDSSPPPPQL 174
KG PIPPSGPS RTSD PPP PK NF M PKD PIPPSGPSQRTSD PPPP +
Sbjct: 410 KGVPIPPSGPSHRTSDYPPPPPHVLWPKINFGMLPKDVPIPPSGPSQRTSDYPPPPPHV 468
BLAST of Spg013433 vs. ExPASy TrEMBL
Match:
A0A6J5XM21 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS39378 PE=4 SV=1)
HSP 1 Score: 124.0 bits (310), Expect = 6.0e-25
Identity = 80/142 (56.34%), Postives = 82/142 (57.75%), Query Frame = 0
Query: 31 PIPPTGPNQRTSDSSPPPPSYSSLENESKFNFGAYSKGASKSKFNFVMYPKGVPIPPSGP 90
PIPP+GP+ RTSD PPPP FNF PK PIPPSGP
Sbjct: 101 PIPPSGPSGRTSDPPPPPP-----------------------PFNFGTLPKYTPIPPSGP 160
Query: 91 SQRTSDSLTPPPPSFILEKESKFNFKMYPKGTPIPPSGPSQRTSD-PSPPPPKFNFKMYP 150
S RTSD PPPP FNF PK TPIPPSGPS RTSD P PPPP FNF P
Sbjct: 161 SGRTSDPPPPPPP--------PFNFGTLPKYTPIPPSGPSGRTSDPPPPPPPPFNFGTLP 211
Query: 151 KDTPIPPSGPSQRTSDSSPPPP 172
K TPIPPSGPS RTSD PPPP
Sbjct: 221 KYTPIPPSGPSGRTSDPPPPPP 211
BLAST of Spg013433 vs. ExPASy TrEMBL
Match:
A0A438DWZ1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_074658 PE=4 SV=1)
HSP 1 Score: 119.8 bits (299), Expect = 1.1e-23
Identity = 79/148 (53.38%), Postives = 86/148 (58.11%), Query Frame = 0
Query: 31 PIPPTGPNQRTSDSSPPPPSYSSLENESKFNFGAYSKGASKSKFNFVMYPKGVPIPPSGP 90
PIPP+GP+ R S++ PPP S+ A F M PKGVPIPPSGP
Sbjct: 46 PIPPSGPSHRGSETPPPPHSF-----------------ARGPTLRFGMLPKGVPIPPSGP 105
Query: 91 SQRTSDSLTPPPPSFILEKESKFNFKMYPKGTPIPPSGPSQRTSDPSPPP------PKFN 150
SQRTSD PPPP + S F F M PKG PIPPSGPS R S+ PPP P
Sbjct: 106 SQRTSD---PPPPPQPFARASVFRFGMLPKGDPIPPSGPSHRGSETPPPPHSFARGPTLR 165
Query: 151 FKMYPKDTPIPPSGPSQRTSDSSPPPPQ 173
F M PK PIPPSGPSQRTSD PPPPQ
Sbjct: 166 FGMLPKGDPIPPSGPSQRTSD-PPPPPQ 172
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_011654399.2 | 1.0e-34 | 59.06 | proline-rich protein HaeIII subfamily 1-like [Cucumis sativus] | [more] |
| KAG6603169.1 | 1.7e-34 | 54.30 | hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_008442275.1 | 1.6e-32 | 56.73 | PREDICTED: proline-rich protein HaeIII subfamily 1-like [Cucumis melo] >KAA00418... | [more] |
| XP_022967687.1 | 4.7e-32 | 54.19 | actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima] | [more] |
| CAB4314850.1 | 1.2e-24 | 56.34 | unnamed protein product [Prunus armeniaca] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3C2C7 | 7.9e-33 | 56.73 | Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... | [more] |
| A0A1S3B4V4 | 7.9e-33 | 56.73 | proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo OX=3656 GN=LOC10348... | [more] |
| A0A6J1HRH7 | 2.3e-32 | 54.19 | actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3... | [more] |
| A0A6J5XM21 | 6.0e-25 | 56.34 | Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS39378 PE=... | [more] |
| A0A438DWZ1 | 1.1e-23 | 53.38 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_074658 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
