Spg013416 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg013416
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	transcription factor TCP11-like
Location	scaffold1: 13057307 .. 13057921 (+)
RNA-Seq Expression	Spg013416
Synteny	Spg013416

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATCGGAGGTCGTTCTCCACAAATTCCCCTCTTCCTCCGACCCCCATTCTCAGCCCACCGCTTCTTCTCACTCACTCGCCACTAACCCATCTCCGGCCAACGCCACGCAATCCGTCGTACCCCGAAAATCCACCGCCGCTTTATCCAGGGACCGCCACACCAAGGTCAACGGCAGAGGCCGCCGCGTTCGTATGCCGGCCCTCTGCGCCGCCCGCATCTTTCAGTTGACGCGCGAGCTTGGCCATCGTTCCGATGGCGAGACGATCGAGTGGCTGCTCCGTCAGGCTGAGCCCTCCATCATTGCCGCCACTGGTACTGGTACTGTTCCGGCAGCTCCGATCTCCACCGTCTCCCCGGCTATGGCCTCGTCCGCTCCCTCAGTTTCTTGTAGGGTTCAGCCGGTGGCGGTGGCTGCCGGTGGGCAGGGGATGTTCGCGATGCCTCCGCCGCCGCCGAGCTGCCGTTTGGATTTATGCCAGCCGGTCGGGATGGAGTACTCTGCCGCCGGGAATGATTACCGGCACATGCCGTTCACTGCGCTGCTGTTGCAGCCGGCGACGGCGGACGAGGCGGAGGAGAGGCAGGAAGAGGAGGTCTTCAGAGAACAATAG

mRNA sequence

ATGGGATCGGAGGTCGTTCTCCACAAATTCCCCTCTTCCTCCGACCCCCATTCTCAGCCCACCGCTTCTTCTCACTCACTCGCCACTAACCCATCTCCGGCCAACGCCACGCAATCCGTCGTACCCCGAAAATCCACCGCCGCTTTATCCAGGGACCGCCACACCAAGGTCAACGGCAGAGGCCGCCGCGTTCGTATGCCGGCCCTCTGCGCCGCCCGCATCTTTCAGTTGACGCGCGAGCTTGGCCATCGTTCCGATGGCGAGACGATCGAGTGGCTGCTCCGTCAGGCTGAGCCCTCCATCATTGCCGCCACTGGTACTGGTACTGTTCCGGCAGCTCCGATCTCCACCGTCTCCCCGGCTATGGCCTCGTCCGCTCCCTCAGTTTCTTGTAGGGTTCAGCCGGTGGCGGTGGCTGCCGGTGGGCAGGGGATGTTCGCGATGCCTCCGCCGCCGCCGAGCTGCCGTTTGGATTTATGCCAGCCGGTCGGGATGGAGTACTCTGCCGCCGGGAATGATTACCGGCACATGCCGTTCACTGCGCTGCTGTTGCAGCCGGCGACGGCGGACGAGGCGGAGGAGAGGCAGGAAGAGGAGGTCTTCAGAGAACAATAG

Coding sequence (CDS)

ATGGGATCGGAGGTCGTTCTCCACAAATTCCCCTCTTCCTCCGACCCCCATTCTCAGCCCACCGCTTCTTCTCACTCACTCGCCACTAACCCATCTCCGGCCAACGCCACGCAATCCGTCGTACCCCGAAAATCCACCGCCGCTTTATCCAGGGACCGCCACACCAAGGTCAACGGCAGAGGCCGCCGCGTTCGTATGCCGGCCCTCTGCGCCGCCCGCATCTTTCAGTTGACGCGCGAGCTTGGCCATCGTTCCGATGGCGAGACGATCGAGTGGCTGCTCCGTCAGGCTGAGCCCTCCATCATTGCCGCCACTGGTACTGGTACTGTTCCGGCAGCTCCGATCTCCACCGTCTCCCCGGCTATGGCCTCGTCCGCTCCCTCAGTTTCTTGTAGGGTTCAGCCGGTGGCGGTGGCTGCCGGTGGGCAGGGGATGTTCGCGATGCCTCCGCCGCCGCCGAGCTGCCGTTTGGATTTATGCCAGCCGGTCGGGATGGAGTACTCTGCCGCCGGGAATGATTACCGGCACATGCCGTTCACTGCGCTGCTGTTGCAGCCGGCGACGGCGGACGAGGCGGAGGAGAGGCAGGAAGAGGAGGTCTTCAGAGAACAATAG

Protein sequence

MGSEVVLHKFPSSSDPHSQPTASSHSLATNPSPANATQSVVPRKSTAALSRDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSPAMASSAPSVSCRVQPVAVAAGGQGMFAMPPPPPSCRLDLCQPVGMEYSAAGNDYRHMPFTALLLQPATADEAEERQEEEVFREQ

Homology

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BLAST of Spg013416 vs. NCBI nr
Match: XP_023543697.1 (transcription factor TCP11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.8 bits (852), Expect = 2.1e-87
Identity = 181/210 (86.19%), Postives = 190/210 (90.48%), Query Frame = 0


Query: 1   MGSEVVLHKFPSSSDPHSQPTASSHSLA-TNPSPANAT-QSVVPRKSTAAL-----SRDR 60
           MGSE+ LHKFPSSSD HSQPTA+SHS+  +N SP N T QSVVPRKSTA+L     SRDR
Sbjct: 1   MGSEIALHKFPSSSDHHSQPTAASHSVVRSNASPTNVTQQSVVPRKSTASLSSSSSSRDR 60

Query: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120
           HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 121 PISTVSPAMASSAPSVSCRVQPVAVAAGGQGMFAMPPPPPSCRLDLCQPVGMEYSAAGND 180
           PIST+SPAMASS PSVSCRVQ V VAA  QGMFAM  PPPSCRLDLCQPVG++YSAAGND
Sbjct: 121 PISTISPAMASSGPSVSCRVQSVGVAADEQGMFAM--PPPSCRLDLCQPVGLDYSAAGND 180

Query: 181 YRHMPFTALLLQPATADEAEERQEEEVFRE 204
           YRHMPFTALLLQP+TADEAEERQEEEVFRE
Sbjct: 181 YRHMPFTALLLQPSTADEAEERQEEEVFRE 208

[Close]

BLAST of Spg013416 vs. NCBI nr
Match: XP_022926085.1 (transcription factor TCP11-like [Cucurbita moschata] >KAG7034559.1 Transcription factor TCP11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-86
Identity = 181/210 (86.19%), Postives = 190/210 (90.48%), Query Frame = 0


Query: 1   MGSEVVLHKFPSSSDPHSQPTASSHSLA-TNPSPANAT-QSVVPRKSTAAL-----SRDR 60
           MGSE+ LHKFPSSSD HSQPTA+SHS+  +N SP N T QSVVPRKSTA+L     SRDR
Sbjct: 1   MGSEIALHKFPSSSDHHSQPTAASHSVVRSNASPTNVTQQSVVPRKSTASLSSSSSSRDR 60

Query: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120
           HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 121 PISTVSPAMASSAPSVSCRVQPVAVAAGGQGMFAMPPPPPSCRLDLCQPVGMEYSAAGND 180
           PIST+SPAMASSA SVSCRVQ V VAA  QGMFAM  PPPSCRLDLCQPVG++YSAAGND
Sbjct: 121 PISTISPAMASSALSVSCRVQSVGVAADEQGMFAM--PPPSCRLDLCQPVGLDYSAAGND 180

Query: 181 YRHMPFTALLLQPATADEAEERQEEEVFRE 204
           YRHMPFTALLLQP+TADEAEERQEEEVFRE
Sbjct: 181 YRHMPFTALLLQPSTADEAEERQEEEVFRE 208

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BLAST of Spg013416 vs. NCBI nr
Match: KAG6604408.1 (Transcription factor TCP11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 328.9 bits (842), Expect = 3.0e-86
Identity = 180/210 (85.71%), Postives = 189/210 (90.00%), Query Frame = 0


Query: 1   MGSEVVLHKFPSSSDPHSQPTASSHSLA-TNPSPANA-TQSVVPRKSTAAL-----SRDR 60
           MGSE+ LHKFPSSSD HSQPTA+SHS+  +N SP N   QSVVPRKSTA+L     SRDR
Sbjct: 1   MGSEIALHKFPSSSDHHSQPTAASHSVVRSNASPTNVPQQSVVPRKSTASLSSSSSSRDR 60

Query: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120
           HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 121 PISTVSPAMASSAPSVSCRVQPVAVAAGGQGMFAMPPPPPSCRLDLCQPVGMEYSAAGND 180
           PIST+SPAMASSAPSVSCRVQ V VAA  QGMFAM  P PSCRLDLCQPVG++YSAAGND
Sbjct: 121 PISTISPAMASSAPSVSCRVQSVGVAADEQGMFAM--PTPSCRLDLCQPVGLDYSAAGND 180

Query: 181 YRHMPFTALLLQPATADEAEERQEEEVFRE 204
           YRHMPFTALLLQP+TADEAEERQEEEVFRE
Sbjct: 181 YRHMPFTALLLQPSTADEAEERQEEEVFRE 208

[Close]

BLAST of Spg013416 vs. NCBI nr
Match: XP_038882900.1 (transcription factor TCP11 [Benincasa hispida])

HSP 1 Score: 325.5 bits (833), Expect = 3.3e-85
Identity = 175/205 (85.37%), Postives = 187/205 (91.22%), Query Frame = 0


Query: 1   MGSEVVLHKFPSSSDPHSQPTASSHSLATNPSPANAT-QSVVPRKSTAAL-SRDRHTKVN 60
           MGSE+VLHKFPS+SD +SQPTAS   + +N S AN T Q+VVPRKST +L SRDRHTKVN
Sbjct: 1   MGSEIVLHKFPSTSDHNSQPTASHSVVGSNSSLANITPQAVVPRKSTTSLSSRDRHTKVN 60

Query: 61  GRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTV 120
           GRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPIST+
Sbjct: 61  GRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTL 120

Query: 121 SPAMASSAPSVSCRVQPVAVAAGGQGMFAMPPPPPSCRLDLCQPVGMEYSAAGNDYRHMP 180
           SPAMASSA S+SCRVQP+ V  GGQGMFAM  PPPSCRLDLCQPVGMEYSA GNDYRHMP
Sbjct: 121 SPAMASSARSISCRVQPLTVGGGGQGMFAM--PPPSCRLDLCQPVGMEYSAVGNDYRHMP 180

Query: 181 FTALLLQPATADEAEERQEEEVFRE 204
           FTALLLQP+TA+EAEERQEEEVFRE
Sbjct: 181 FTALLLQPSTAEEAEERQEEEVFRE 203

[Close]

BLAST of Spg013416 vs. NCBI nr
Match: XP_022978800.1 (transcription factor TCP11-like [Cucurbita maxima])

HSP 1 Score: 321.6 bits (823), Expect = 4.8e-84
Identity = 177/210 (84.29%), Postives = 186/210 (88.57%), Query Frame = 0


Query: 1   MGSEVVLHKFPSSSDPHSQPTASSHSLA-TNPSPANAT-QSVVPRKSTAAL-----SRDR 60
           MGSE+ LHKFPSSSD HSQ TA+SHS+   N SP N T QSVVPRKSTA+L     SRDR
Sbjct: 1   MGSEIALHKFPSSSDHHSQSTAASHSVVRNNSSPTNVTQQSVVPRKSTASLSSSSSSRDR 60

Query: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120
           HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 121 PISTVSPAMASSAPSVSCRVQPVAVAAGGQGMFAMPPPPPSCRLDLCQPVGMEYSAAGND 180
           PIST++PAMASSAPSVSCRVQ V VAA  QGMFAM    PSCRLDLCQPVG++YSAAGND
Sbjct: 121 PISTITPAMASSAPSVSCRVQSVGVAADEQGMFAM----PSCRLDLCQPVGLDYSAAGND 180

Query: 181 YRHMPFTALLLQPATADEAEERQEEEVFRE 204
           YRHMPFTALLLQP+TADEAEERQE EVFRE
Sbjct: 181 YRHMPFTALLLQPSTADEAEERQEGEVFRE 206

[Close]

BLAST of Spg013416 vs. ExPASy Swiss-Prot
Match: Q9SJK7 (Transcription factor TCP11 OS=Arabidopsis thaliana OX=3702 GN=TCP11 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.4e-33
Identity = 87/156 (55.77%), Postives = 100/156 (64.10%), Query Frame = 0


Query: 47  AALSRDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATG 106
           +A ++DRHTKVNGR RRV MPAL AARIFQLTRELGH+++GETIEWLL QAEPSIIAATG
Sbjct: 40  SARTKDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAEPSIIAATG 99

Query: 107 TGTVPAAPISTVSPAMASSAPSVSCRVQPVAVAAGGQGMFAMPPPPPSCRLDLCQPVGME 166
            GT     IS      A  + S S    P              P  PSCRLDLCQP+G++
Sbjct: 100 YGT---KLISNWVDVAADDSSSSSSMTSPQTQ--------TQTPQSPSCRLDLCQPIGIQ 159

Query: 167 YSAAGNDYRHMPFTALLLQPATA---DEAEERQEEE 200
           Y    N Y HMPFTA+LL+P T     E E  +EEE
Sbjct: 160 YPV--NGYSHMPFTAMLLEPMTTTAESEVEIAEEEE 182

[Close]

BLAST of Spg013416 vs. ExPASy Swiss-Prot
Match: Q9C518 (Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.6e-27
Identity = 71/115 (61.74%), Postives = 88/115 (76.52%), Query Frame = 0


Query: 16  PHSQPTASSHSLATNPSPANATQSVVPRKSTAALSRDRHTKVNGRGRRVRMPALCAARIF 75
           P S P   S +LAT  S A AT       +T   ++DRHTKV+GRGRR+RMPALCAAR+F
Sbjct: 34  PRSTPPEDS-TLATTSSTATAT-------TTKRSTKDRHTKVDGRGRRIRMPALCAARVF 93

Query: 76  QLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSPAMASSAPSVS 131
           QLTRELGH+SDGETIEWLL+QAEP+I+AATGTGT+P A  ST+S ++ SS  ++S
Sbjct: 94  QLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTIP-ANFSTLSVSLRSSGSTLS 139

[Close]

BLAST of Spg013416 vs. ExPASy Swiss-Prot
Match: Q9FTA2 (Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.8e-25
Identity = 58/75 (77.33%), Postives = 67/75 (89.33%), Query Frame = 0


Query: 50  SRDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGT 109
           S+DRH+KV+GRGRR+RMP +CAAR+FQLTRELGH+SDG+TIEWLLRQAEPSIIAATGTGT
Sbjct: 31  SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGT 90

Query: 110 VPA----APISTVSP 121
            PA    A +ST SP
Sbjct: 91  TPASFSTASLSTSSP 105

[Close]

BLAST of Spg013416 vs. ExPASy Swiss-Prot
Match: Q9LQF0 (Transcription factor TCP23 OS=Arabidopsis thaliana OX=3702 GN=TCP23 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.8e-25
Identity = 69/116 (59.48%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 16  PHSQPTASSHSLATNPSPANATQSVVPRKSTAAL-SRDRHTKVNGRGRRVRMPALCAARI 75
           P   P + S SL T  +P + T +V   K+ A   S+DRH KV+GRGRR+RMPA+CAAR+
Sbjct: 21  PSMGPISGSVSLTTT-APNSTTTTVTAAKTPAKRPSKDRHIKVDGRGRRIRMPAICAARV 80

Query: 76  FQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSPAMASSAPSVS 131
           FQLTREL H+SDGETIEWLL+QAEP+IIAATGTGT+P A IST++ ++ SS  ++S
Sbjct: 81  FQLTRELQHKSDGETIEWLLQQAEPAIIAATGTGTIP-ANISTLNISLRSSGSTLS 134

[Close]

BLAST of Spg013416 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-25
Identity = 70/121 (57.85%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 11  PSSSDPHSQP-TASSHSLATNPSPANATQSVVPRKSTAALSRDRHTKVNGRGRRVRMPAL 70
           P S    SQP T     L T    A       P K   A ++DRHTKV+GRGRR+RMPAL
Sbjct: 79  PQSQSQKSQPQTTQKELLQTQEESAVVAAKKPPLK--RASTKDRHTKVDGRGRRIRMPAL 138

Query: 71  CAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSPAMASSAPSV 130
           CAAR+FQLTRELGH+SDGETIEWLL+QAEPS+IAATGTGT+P A  ++++ ++ SS  S+
Sbjct: 139 CAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIP-ANFTSLNISLRSSGSSM 196

[Close]

BLAST of Spg013416 vs. ExPASy TrEMBL
Match: A0A6J1EK07 (transcription factor TCP11-like OS=Cucurbita moschata OX=3662 GN=LOC111433306 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 5.0e-87
Identity = 181/210 (86.19%), Postives = 190/210 (90.48%), Query Frame = 0


Query: 1   MGSEVVLHKFPSSSDPHSQPTASSHSLA-TNPSPANAT-QSVVPRKSTAAL-----SRDR 60
           MGSE+ LHKFPSSSD HSQPTA+SHS+  +N SP N T QSVVPRKSTA+L     SRDR
Sbjct: 1   MGSEIALHKFPSSSDHHSQPTAASHSVVRSNASPTNVTQQSVVPRKSTASLSSSSSSRDR 60

Query: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120
           HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 121 PISTVSPAMASSAPSVSCRVQPVAVAAGGQGMFAMPPPPPSCRLDLCQPVGMEYSAAGND 180
           PIST+SPAMASSA SVSCRVQ V VAA  QGMFAM  PPPSCRLDLCQPVG++YSAAGND
Sbjct: 121 PISTISPAMASSALSVSCRVQSVGVAADEQGMFAM--PPPSCRLDLCQPVGLDYSAAGND 180

Query: 181 YRHMPFTALLLQPATADEAEERQEEEVFRE 204
           YRHMPFTALLLQP+TADEAEERQEEEVFRE
Sbjct: 181 YRHMPFTALLLQPSTADEAEERQEEEVFRE 208

[Close]

BLAST of Spg013416 vs. ExPASy TrEMBL
Match: A0A6J1IR93 (transcription factor TCP11-like OS=Cucurbita maxima OX=3661 GN=LOC111478656 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.3e-84
Identity = 177/210 (84.29%), Postives = 186/210 (88.57%), Query Frame = 0


Query: 1   MGSEVVLHKFPSSSDPHSQPTASSHSLA-TNPSPANAT-QSVVPRKSTAAL-----SRDR 60
           MGSE+ LHKFPSSSD HSQ TA+SHS+   N SP N T QSVVPRKSTA+L     SRDR
Sbjct: 1   MGSEIALHKFPSSSDHHSQSTAASHSVVRNNSSPTNVTQQSVVPRKSTASLSSSSSSRDR 60

Query: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120
           HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 121 PISTVSPAMASSAPSVSCRVQPVAVAAGGQGMFAMPPPPPSCRLDLCQPVGMEYSAAGND 180
           PIST++PAMASSAPSVSCRVQ V VAA  QGMFAM    PSCRLDLCQPVG++YSAAGND
Sbjct: 121 PISTITPAMASSAPSVSCRVQSVGVAADEQGMFAM----PSCRLDLCQPVGLDYSAAGND 180

Query: 181 YRHMPFTALLLQPATADEAEERQEEEVFRE 204
           YRHMPFTALLLQP+TADEAEERQE EVFRE
Sbjct: 181 YRHMPFTALLLQPSTADEAEERQEGEVFRE 206

[Close]

BLAST of Spg013416 vs. ExPASy TrEMBL
Match: A0A6J1CQB6 (transcription factor TCP11 OS=Momordica charantia OX=3673 GN=LOC111013755 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.3e-82
Identity = 170/209 (81.34%), Postives = 180/209 (86.12%), Query Frame = 0


Query: 1   MGSEVVLHKFPSSSDPHSQPTASSHSLATNPSPANATQSVVPRKSTAAL-----SRDRHT 60
           MGSE+VLHKFPS SDPHS   A++ S   N       Q V+PRKST+A      SRDRHT
Sbjct: 1   MGSEIVLHKFPSPSDPHSSQPAAADSARAN----TTAQLVLPRKSTSATALSSSSRDRHT 60

Query: 61  KVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI 120
           KVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI
Sbjct: 61  KVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI 120

Query: 121 STVSPAMASSAPSVSCRVQPVAVAAGGQGMFAMPPPPPSCRLDLCQPVGMEYSAAGNDYR 180
           ST S A+ASSAPSVSCRVQPV V  GGQGMF MP PPPSCRLDLCQP+GMEY+AAGNDYR
Sbjct: 121 STASQAIASSAPSVSCRVQPVPV-GGGQGMFVMPQPPPSCRLDLCQPLGMEYAAAGNDYR 180

Query: 181 HMPFTALLLQPATADEAEERQEEEVFREQ 205
           HMPFTALLLQP+TADEAEERQEEEVFR+Q
Sbjct: 181 HMPFTALLLQPSTADEAEERQEEEVFRDQ 204

[Close]

BLAST of Spg013416 vs. ExPASy TrEMBL
Match: A0A1S3CGZ3 (uncharacterized protein LOC103500811 OS=Cucumis melo OX=3656 GN=LOC103500811 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.4e-81
Identity = 166/209 (79.43%), Postives = 182/209 (87.08%), Query Frame = 0


Query: 1   MGSEVVLHKFPSSSDPHSQPTASSHS-LATNPSPAN-ATQSVVPRKSTAAL----SRDRH 60
           MGS++VLHKFPSSSDPHSQP  +SHS + +N SPA  + QS++PRKS  +L    S+DRH
Sbjct: 116 MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPATISRQSLLPRKSNTSLSSSSSKDRH 175

Query: 61  TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP 120
            KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ P
Sbjct: 176 IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 235

Query: 121 ISTVSPAMASSAPSVSCRVQPVAVAAGGQGMFAMPPPPPSCRLDLCQPVGMEYSAAGNDY 180
           ISTVS AMASS  SVSCR+QPV V   GQGMF+M  PPPSCRLDLCQPVGMEYSAAGNDY
Sbjct: 236 ISTVSSAMASSGRSVSCRIQPVTVGGSGQGMFSM--PPPSCRLDLCQPVGMEYSAAGNDY 295

Query: 181 RHMPFTALLLQPATADEAEERQEEEVFRE 204
           RHMPFTALLLQP+T +E EERQEEEVFRE
Sbjct: 296 RHMPFTALLLQPSTGEETEERQEEEVFRE 322

[Close]

BLAST of Spg013416 vs. ExPASy TrEMBL
Match: A0A0A0KH86 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G446400 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.0e-80
Identity = 166/207 (80.19%), Postives = 179/207 (86.47%), Query Frame = 0


Query: 1   MGSEVVLHKFPSSSDPHSQPTASSHS-LATNPSPANAT-QSVVPRKSTAAL----SRDRH 60
           MGS++VLHKFPSSSDPHSQP  +SHS + +N SP   T QS++PRKS   L    S+DRH
Sbjct: 1   MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRH 60

Query: 61  TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP 120
            KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ P
Sbjct: 61  IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 120

Query: 121 ISTVSPAMASSAPSVSCRVQPVAVAAGGQGMFAMPPPPPSCRLDLCQPVGMEYSAAGNDY 180
           ISTVS AMASS  SVSCRVQPV V   GQGMFAM  PPPSCRLDLCQPVGMEYSAAGNDY
Sbjct: 121 ISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAM--PPPSCRLDLCQPVGMEYSAAGNDY 180

Query: 181 RHMPFTALLLQPATADEAEERQEEEVF 202
           RHMPFTALLLQP+TA+E EERQEEE+F
Sbjct: 181 RHMPFTALLLQPSTAEETEERQEEELF 205

[Close]

BLAST of Spg013416 vs. TAIR 10
Match: AT2G37000.1 (TCP family transcription factor )

HSP 1 Score: 144.4 bits (363), Expect = 9.8e-35
Identity = 87/156 (55.77%), Postives = 100/156 (64.10%), Query Frame = 0


Query: 47  AALSRDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATG 106
           +A ++DRHTKVNGR RRV MPAL AARIFQLTRELGH+++GETIEWLL QAEPSIIAATG
Sbjct: 40  SARTKDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAEPSIIAATG 99

Query: 107 TGTVPAAPISTVSPAMASSAPSVSCRVQPVAVAAGGQGMFAMPPPPPSCRLDLCQPVGME 166
            GT     IS      A  + S S    P              P  PSCRLDLCQP+G++
Sbjct: 100 YGT---KLISNWVDVAADDSSSSSSMTSPQTQ--------TQTPQSPSCRLDLCQPIGIQ 159

Query: 167 YSAAGNDYRHMPFTALLLQPATA---DEAEERQEEE 200
           Y    N Y HMPFTA+LL+P T     E E  +EEE
Sbjct: 160 YPV--NGYSHMPFTAMLLEPMTTTAESEVEIAEEEE 182

[Close]

BLAST of Spg013416 vs. TAIR 10
Match: AT1G58100.1 (TCP family transcription factor )

HSP 1 Score: 122.5 bits (306), Expect = 4.0e-28
Identity = 71/115 (61.74%), Postives = 88/115 (76.52%), Query Frame = 0


Query: 16  PHSQPTASSHSLATNPSPANATQSVVPRKSTAALSRDRHTKVNGRGRRVRMPALCAARIF 75
           P S P   S +LAT  S A AT       +T   ++DRHTKV+GRGRR+RMPALCAAR+F
Sbjct: 34  PRSTPPEDS-TLATTSSTATAT-------TTKRSTKDRHTKVDGRGRRIRMPALCAARVF 93

Query: 76  QLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSPAMASSAPSVS 131
           QLTRELGH+SDGETIEWLL+QAEP+I+AATGTGT+P A  ST+S ++ SS  ++S
Sbjct: 94  QLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTIP-ANFSTLSVSLRSSGSTLS 139

[Close]

BLAST of Spg013416 vs. TAIR 10
Match: AT1G35560.1 (TCP family transcription factor )

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-26
Identity = 69/116 (59.48%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 16  PHSQPTASSHSLATNPSPANATQSVVPRKSTAAL-SRDRHTKVNGRGRRVRMPALCAARI 75
           P   P + S SL T  +P + T +V   K+ A   S+DRH KV+GRGRR+RMPA+CAAR+
Sbjct: 21  PSMGPISGSVSLTTT-APNSTTTTVTAAKTPAKRPSKDRHIKVDGRGRRIRMPAICAARV 80

Query: 76  FQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSPAMASSAPSVS 131
           FQLTREL H+SDGETIEWLL+QAEP+IIAATGTGT+P A IST++ ++ SS  ++S
Sbjct: 81  FQLTRELQHKSDGETIEWLLQQAEPAIIAATGTGTIP-ANISTLNISLRSSGSTLS 134

[Close]

BLAST of Spg013416 vs. TAIR 10
Match: AT5G08330.1 (TCP family transcription factor )

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-26
Identity = 58/75 (77.33%), Postives = 67/75 (89.33%), Query Frame = 0


Query: 50  SRDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGT 109
           S+DRH+KV+GRGRR+RMP +CAAR+FQLTRELGH+SDG+TIEWLLRQAEPSIIAATGTGT
Sbjct: 31  SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGT 90

Query: 110 VPA----APISTVSP 121
            PA    A +ST SP
Sbjct: 91  TPASFSTASLSTSSP 105

[Close]

BLAST of Spg013416 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-26
Identity = 70/121 (57.85%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 11  PSSSDPHSQP-TASSHSLATNPSPANATQSVVPRKSTAALSRDRHTKVNGRGRRVRMPAL 70
           P S    SQP T     L T    A       P K   A ++DRHTKV+GRGRR+RMPAL
Sbjct: 79  PQSQSQKSQPQTTQKELLQTQEESAVVAAKKPPLK--RASTKDRHTKVDGRGRRIRMPAL 138

Query: 71  CAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSPAMASSAPSV 130
           CAAR+FQLTRELGH+SDGETIEWLL+QAEPS+IAATGTGT+P A  ++++ ++ SS  S+
Sbjct: 139 CAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIP-ANFTSLNISLRSSGSSM 196

The following BLAST results are available for this feature:

BLAST of Spg013416 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543697.1	2.1e-87	86.19	transcription factor TCP11-like [Cucurbita pepo subsp. pepo]	[more]
XP_022926085.1	1.0e-86	86.19	transcription factor TCP11-like [Cucurbita moschata] >KAG7034559.1 Transcription...	[more]
KAG6604408.1	3.0e-86	85.71	Transcription factor TCP11, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038882900.1	3.3e-85	85.37	transcription factor TCP11 [Benincasa hispida]	[more]
XP_022978800.1	4.8e-84	84.29	transcription factor TCP11-like [Cucurbita maxima]	[more]

BLAST of Spg013416 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJK7	1.4e-33	55.77	Transcription factor TCP11 OS=Arabidopsis thaliana OX=3702 GN=TCP11 PE=1 SV=1	[more]
Q9C518	5.6e-27	61.74	Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1	[more]
Q9FTA2	1.8e-25	77.33	Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1	[more]
Q9LQF0	1.8e-25	59.48	Transcription factor TCP23 OS=Arabidopsis thaliana OX=3702 GN=TCP23 PE=1 SV=1	[more]
Q93Z00	2.4e-25	57.85	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]

BLAST of Spg013416 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EK07	5.0e-87	86.19	transcription factor TCP11-like OS=Cucurbita moschata OX=3662 GN=LOC111433306 PE...	[more]
A0A6J1IR93	2.3e-84	84.29	transcription factor TCP11-like OS=Cucurbita maxima OX=3661 GN=LOC111478656 PE=4...	[more]
A0A6J1CQB6	1.3e-82	81.34	transcription factor TCP11 OS=Momordica charantia OX=3673 GN=LOC111013755 PE=4 S...	[more]
A0A1S3CGZ3	5.4e-81	79.43	uncharacterized protein LOC103500811 OS=Cucumis melo OX=3656 GN=LOC103500811 PE=...	[more]
A0A0A0KH86	2.0e-80	80.19	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G446400 PE=4 SV...	[more]

BLAST of Spg013416 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37000.1	9.8e-35	55.77	TCP family transcription factor	[more]
AT1G58100.1	4.0e-28	61.74	TCP family transcription factor	[more]
AT1G35560.1	1.3e-26	59.48	TCP family transcription factor	[more]
AT5G08330.1	1.3e-26	77.33	TCP family transcription factor	[more]
AT3G47620.1	1.7e-26	57.85	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 50..139 e-value: 4.9E-29 score: 101.9
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 50..104 score: 27.171705
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	PANTHER	PTHR31072:SF4	TRANSCRIPTION FACTOR TCP16-RELATED	coord: 28..130
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 28..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg013416.1	Spg013416.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity