Spg013399 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg013399
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Thioredoxin, putative
Location	scaffold1: 12916756 .. 12918017 (+)
RNA-Seq Expression	Spg013399
Synteny	Spg013399

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTGGAAGACTGATAATAATAAGAAATTCAGGGACTCCCGATAATTTAATCAGGAACTTAGCAACAAATTGATGATCGAATTAATCTCTCGTCCACGTAAAAGCCGAACATTTTTCCTTTTAATGGATTAATGGATAACGCTCGTTAGAATAAGAATTTGAATTCTCTTCACCACTCAAATTTGGAAGCAGTAGCCGCCATAGCCAAAAGGGGATGGAGGACAAGGAGAAGAAGGGGCTAGAAGGCACTGGTTTAGATCTTCCAGTCAATCGCCATGGTAACTTGAAGAGTGCTTCTAGCGATCAAGATTTCAAGGATGTTCTTCTTCAAATCAAGTCCTCCAAAACCACTGTAAACTTCTTTATACTTAATAAATTTTGTTTCCCATTCCCCTAAATCGCTGTCCTCGTGTTATTTCATGGGCTGTTTGGTTTCTTGGAAAATTGTGTAAACTCGAATGGGATGAAGATTTCAAGTTACGGGTTTTTGGTTCTTTCTGTGCTGTAACTGGTTTTGGAAGATTGATTGTTTGATTCTATTGTTCAATACTTTGCAGGCAGTTATCAAATATGGTGCATCCTGGTAAGTCCACACTTTTCTTTAGCGGATTGAACGCAAGGTGTTTGAGGTTTTGCCTGTATGAGAAATGCTGAAAGACTAGAATAACAAACGCCTTTCTCTCTCTCTCAACAACATAGGTGATTGGTTTGTTTCATAGCTGATGAATTTAAATATGCCATCTCTTGCTTCAATTTCATTTCACCATTCGTCACTGTTCTTAGCAACACTTTCATAATGGGGAATTGTAAAATTTGTTCCCACTGGTCATTGCTGGACTAATGTTAAAAAGAACTTACCAGCAAAGCTCTGCATTACCATTTCAGTGAGGTAGTTGATAGAATCTGGTGCTCAAATTGAGTTGAGAGAAAACATAATCTGGTGCTAAAATTAAACCTCAGTTTCTTGTTTTAAGAGCTCATGGATTGCTTTTGTGATATCAGAACCTGCAGGGCTTAGAGGGATTGTTGTTGTTCGTTTCAGGTGTCGTGTGTGCAGTCAGATTCTCCCTGCTTTCTGTCGGCTGAGTAACAATTTTCCAAAGGTTTCTTTCATCTATGCAGATATTGATGAATGCCCAGAAACAACTGAACACATCCGCTACACACCGACATTTCAATTCTATCGAGACGGTGAAAGAGTCGACGAGATGTTTGGTGCCGGGGAAGAACGGCTGCACGACAGGTTGTGGTTGCATTCCTAA

mRNA sequence

ATGGAGGACAAGGAGAAGAAGGGGCTAGAAGGCACTGGTTTAGATCTTCCAGTCAATCGCCATGGTAACTTGAAGAGTGCTTCTAGCGATCAAGATTTCAAGGATGTTCTTCTTCAAATCAAGTCCTCCAAAACCACTGCAGTTATCAAATATGGTGCATCCTGCAAAGCTCTGCATTACCATTTCAGTGAGAGCTCATGGATTGCTTTTGTGATATCAGAACCTGCAGGGCTTAGAGGGATTGTTGTTGTTCGTTTCAGGTGTCGTGTGTGCAGTCAGATTCTCCCTGCTTTCTGTCGGCTGAGTAACAATTTTCCAAAGGTTTCTTTCATCTATGCAGATATTGATGAATGCCCAGAAACAACTGAACACATCCGCTACACACCGACATTTCAATTCTATCGAGACGGTGAAAGAGTCGACGAGATGTTTGGTGCCGGGGAAGAACGGCTGCACGACAGGTTGTGGTTGCATTCCTAA

Coding sequence (CDS)

ATGGAGGACAAGGAGAAGAAGGGGCTAGAAGGCACTGGTTTAGATCTTCCAGTCAATCGCCATGGTAACTTGAAGAGTGCTTCTAGCGATCAAGATTTCAAGGATGTTCTTCTTCAAATCAAGTCCTCCAAAACCACTGCAGTTATCAAATATGGTGCATCCTGCAAAGCTCTGCATTACCATTTCAGTGAGAGCTCATGGATTGCTTTTGTGATATCAGAACCTGCAGGGCTTAGAGGGATTGTTGTTGTTCGTTTCAGGTGTCGTGTGTGCAGTCAGATTCTCCCTGCTTTCTGTCGGCTGAGTAACAATTTTCCAAAGGTTTCTTTCATCTATGCAGATATTGATGAATGCCCAGAAACAACTGAACACATCCGCTACACACCGACATTTCAATTCTATCGAGACGGTGAAAGAGTCGACGAGATGTTTGGTGCCGGGGAAGAACGGCTGCACGACAGGTTGTGGTTGCATTCCTAA

Protein sequence

MEDKEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVIKYGASCKALHYHFSESSWIAFVISEPAGLRGIVVVRFRCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFQFYRDGERVDEMFGAGEERLHDRLWLHS

Homology

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BLAST of Spg013399 vs. NCBI nr
Match: XP_022143884.1 (thioredoxin-like 3-3 [Momordica charantia])

HSP 1 Score: 236.9 bits (603), Expect = 1.2e-58
Identity = 121/159 (76.10%), Postives = 123/159 (77.36%), Query Frame = 0


Query: 1   MEDKEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVIKYGASCKALHY 60
           MED EKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVI YGA       
Sbjct: 1   MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGA------- 60

Query: 61  HFSESSWIAFVISEPAGLRGIVVVRFRCRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120
                SW                    CRVCSQILPAFCRLSNNFPK+ FIYADIDECPE
Sbjct: 61  -----SW--------------------CRVCSQILPAFCRLSNNFPKLYFIYADIDECPE 120

Query: 121 TTEHIRYTPTFQFYRDGERVDEMFGAGEERLHDRLWLHS 160
           TT+HIRYTPTF FYRDGERVDEMFGAGEERLHDRLWLHS
Sbjct: 121 TTQHIRYTPTFHFYRDGERVDEMFGAGEERLHDRLWLHS 127

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BLAST of Spg013399 vs. NCBI nr
Match: XP_008462474.1 (PREDICTED: thioredoxin-like 3-3 [Cucumis melo] >XP_008462475.1 PREDICTED: thioredoxin-like 3-3 [Cucumis melo] >XP_008462476.1 PREDICTED: thioredoxin-like 3-3 [Cucumis melo] >XP_008462478.1 PREDICTED: thioredoxin-like 3-3 [Cucumis melo] >TYK07313.1 thioredoxin-like 3-3 [Cucumis melo var. makuwa])

HSP 1 Score: 235.0 bits (598), Expect = 4.6e-58
Identity = 121/159 (76.10%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 1   MEDKEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVIKYGASCKALHY 60
           MEDKEKKGLEGTG  LPVN HGNLKSASSDQDFKDVLLQIKSSKTTAVI YGA       
Sbjct: 1   MEDKEKKGLEGTGSCLPVNHHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGA------- 60

Query: 61  HFSESSWIAFVISEPAGLRGIVVVRFRCRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120
                SW                    CRVCSQILPAFCRLSNNFPKVSFIYADIDECPE
Sbjct: 61  -----SW--------------------CRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120

Query: 121 TTEHIRYTPTFQFYRDGERVDEMFGAGEERLHDRLWLHS 160
           TT+HIRYTPTF FYRDGERVDEMFGAGEERLHDRLWLHS
Sbjct: 121 TTQHIRYTPTFHFYRDGERVDEMFGAGEERLHDRLWLHS 127

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BLAST of Spg013399 vs. NCBI nr
Match: XP_011657665.1 (thioredoxin-like 3-3 [Cucumis sativus] >XP_031742982.1 thioredoxin-like 3-3 [Cucumis sativus] >KGN48189.1 hypothetical protein Csa_003651 [Cucumis sativus])

HSP 1 Score: 234.6 bits (597), Expect = 6.0e-58
Identity = 121/159 (76.10%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 1   MEDKEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVIKYGASCKALHY 60
           MEDKEKKGLEGTGL LPVN HGNLKSASSDQDFKDVLLQIKSSKTTAVI YGA       
Sbjct: 1   MEDKEKKGLEGTGLCLPVNHHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGA------- 60

Query: 61  HFSESSWIAFVISEPAGLRGIVVVRFRCRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120
                SW                    CRVCSQILPAFCRLSNNFPKVSFIYADIDECPE
Sbjct: 61  -----SW--------------------CRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120

Query: 121 TTEHIRYTPTFQFYRDGERVDEMFGAGEERLHDRLWLHS 160
           TT+HIRYTPTF FYR GERVDEMFGAGEERLHDRLWLHS
Sbjct: 121 TTQHIRYTPTFHFYRGGERVDEMFGAGEERLHDRLWLHS 127

[Close]

BLAST of Spg013399 vs. NCBI nr
Match: XP_022963258.1 (thioredoxin-like 3-3 [Cucurbita moschata] >XP_022963259.1 thioredoxin-like 3-3 [Cucurbita moschata] >XP_022963260.1 thioredoxin-like 3-3 [Cucurbita moschata] >XP_022963261.1 thioredoxin-like 3-3 [Cucurbita moschata])

HSP 1 Score: 234.6 bits (597), Expect = 6.0e-58
Identity = 121/159 (76.10%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MEDKEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVIKYGASCKALHY 60
           MEDKEKKGLEG GLD  VNRHGNLKSASSDQDFKDVLLQIKSSKTTAVI YGA       
Sbjct: 1   MEDKEKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGA------- 60

Query: 61  HFSESSWIAFVISEPAGLRGIVVVRFRCRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120
                SW                    CRVCSQILPAFCRLSNNFPKVSFIYADIDECPE
Sbjct: 61  -----SW--------------------CRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120

Query: 121 TTEHIRYTPTFQFYRDGERVDEMFGAGEERLHDRLWLHS 160
           TTEHIRYTPTF FYRDGERVDEMFG GEERLHDRLWLHS
Sbjct: 121 TTEHIRYTPTFHFYRDGERVDEMFGTGEERLHDRLWLHS 127

[Close]

BLAST of Spg013399 vs. NCBI nr
Match: XP_022972722.1 (thioredoxin-like 3-3 [Cucurbita maxima] >XP_022972723.1 thioredoxin-like 3-3 [Cucurbita maxima] >XP_022972724.1 thioredoxin-like 3-3 [Cucurbita maxima] >XP_022972725.1 thioredoxin-like 3-3 [Cucurbita maxima] >XP_023518471.1 thioredoxin-like 3-3 [Cucurbita pepo subsp. pepo] >XP_023518472.1 thioredoxin-like 3-3 [Cucurbita pepo subsp. pepo] >XP_023518473.1 thioredoxin-like 3-3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 232.6 bits (592), Expect = 2.3e-57
Identity = 120/159 (75.47%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MEDKEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVIKYGASCKALHY 60
           MEDKEKKGLEG GLD  V+RHGNLKSASSDQDFKDVLLQIKSSKTTAVI YGA       
Sbjct: 1   MEDKEKKGLEGAGLDPTVSRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGA------- 60

Query: 61  HFSESSWIAFVISEPAGLRGIVVVRFRCRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120
                SW                    CRVCSQILPAFCRLSNNFPKVSFIYADIDECPE
Sbjct: 61  -----SW--------------------CRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120

Query: 121 TTEHIRYTPTFQFYRDGERVDEMFGAGEERLHDRLWLHS 160
           TTEHIRYTPTF FYRDGERVDEMFG GEERLHDRLWLHS
Sbjct: 121 TTEHIRYTPTFHFYRDGERVDEMFGTGEERLHDRLWLHS 127

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BLAST of Spg013399 vs. ExPASy Swiss-Prot
Match: Q7XSQ7 (Thioredoxin-like 3-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560200 PE=2 SV=2)

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-44
Identity = 92/157 (58.60%), Postives = 104/157 (66.24%), Query Frame = 0


Query: 3   DKEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVIKYGASCKALHYHF 62
           + +K GLEGTGL LP + HGNL+SA SDQ  K +L  +KSSK+ AVI YGA         
Sbjct: 5   EAKKTGLEGTGLSLPGSSHGNLRSAGSDQQLKQMLDSLKSSKSPAVINYGA--------- 64

Query: 63  SESSWIAFVISEPAGLRGIVVVRFRCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETT 122
              SW                    CRVCSQILP FCR SN F  ++FIYADIDECPETT
Sbjct: 65  ---SW--------------------CRVCSQILPPFCRFSNEFKNLTFIYADIDECPETT 124

Query: 123 EHIRYTPTFQFYRDGERVDEMFGAGEERLHDRLWLHS 160
           ++IRYTPTF FYRDGE+VDEM G GEERLHDRLWLHS
Sbjct: 125 QNIRYTPTFHFYRDGEKVDEMLGTGEERLHDRLWLHS 129

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BLAST of Spg013399 vs. ExPASy Swiss-Prot
Match: Q8LCH9 (Thioredoxin-like 3-3 OS=Arabidopsis thaliana OX=3702 GN=At3g53220 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.5e-39
Identity = 87/156 (55.77%), Postives = 100/156 (64.10%), Query Frame = 0


Query: 6   KKGLEGTGLDL--PVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVIKYGASCKALHYHFS 65
           K+  EG  L+     N +GN+K A +DQ F  +L  IKSSK+ AVI YGA          
Sbjct: 3   KQESEGANLEFESKSNDNGNVKIAPNDQSFLTILDDIKSSKSPAVINYGA---------- 62

Query: 66  ESSWIAFVISEPAGLRGIVVVRFRCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTE 125
             SW                    C VCSQILPAF +LSN+F K+ F+YADIDECPETT 
Sbjct: 63  --SW--------------------CGVCSQILPAFRKLSNSFSKLKFVYADIDECPETTR 122

Query: 126 HIRYTPTFQFYRDGERVDEMFGAGEERLHDRLWLHS 160
           HIRYTPTFQFYRDGE+VDEMFGAGE+RLHDRLWLHS
Sbjct: 123 HIRYTPTFQFYRDGEKVDEMFGAGEQRLHDRLWLHS 126

[Close]

BLAST of Spg013399 vs. ExPASy Swiss-Prot
Match: P85801 (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 33/89 (37.08%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 72  ISEPAGLRGIVVVRFR---CRVCSQILPAFCRLSNNFPKVSFIYADIDECPE--TTEHIR 131
           +SE +    IV+  F    C  C QI P +  LS N+P + F+  D+DE  +   +  I+
Sbjct: 39  LSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIK 98

Query: 132 YTPTFQFYRDGERVDEMFGAGEERLHDRL 156
            TPTF F RDG++VD++ GA +  LH ++
Sbjct: 99  ATPTFFFLRDGQQVDKLVGANKPELHKKI 127

[Close]

BLAST of Spg013399 vs. ExPASy Swiss-Prot
Match: O43396 (Thioredoxin-like protein 1 OS=Homo sapiens OX=9606 GN=TXNL1 PE=1 SV=3)

HSP 1 Score: 59.3 bits (142), Expect = 4.5e-08
Identity = 33/88 (37.50%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 76  AGLRGIVVVRFR---CRVCSQILPAFCRLSNNFPKVSFIYADIDECPET--TEHIRYTPT 135
           AG R + VV+F    C  C +I PAF  +SN +P+  F+  D+ +C  T  T +I  TPT
Sbjct: 20  AGSR-LAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPT 79

Query: 136 FQFYRDGERVDEMFGAGEERLHDRLWLH 159
           F F+R+  R+D+  GA    L +++  H
Sbjct: 80  FLFFRNKVRIDQYQGADAVGLEEKIKQH 106

[Close]

BLAST of Spg013399 vs. ExPASy Swiss-Prot
Match: Q8CDN6 (Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3)

HSP 1 Score: 59.3 bits (142), Expect = 4.5e-08
Identity = 33/88 (37.50%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 76  AGLRGIVVVRFR---CRVCSQILPAFCRLSNNFPKVSFIYADIDECPET--TEHIRYTPT 135
           AG R + VV+F    C  C +I PAF  +SN +P+  F+  D+ +C  T  T +I  TPT
Sbjct: 20  AGSR-LAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPT 79

Query: 136 FQFYRDGERVDEMFGAGEERLHDRLWLH 159
           F F+R+  R+D+  GA    L +++  H
Sbjct: 80  FLFFRNKVRIDQYQGADAVGLEEKIKQH 106

[Close]

BLAST of Spg013399 vs. ExPASy TrEMBL
Match: A0A6J1CQN4 (thioredoxin-like 3-3 OS=Momordica charantia OX=3673 GN=LOC111013691 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 5.9e-59
Identity = 121/159 (76.10%), Postives = 123/159 (77.36%), Query Frame = 0


Query: 1   MEDKEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVIKYGASCKALHY 60
           MED EKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVI YGA       
Sbjct: 1   MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGA------- 60

Query: 61  HFSESSWIAFVISEPAGLRGIVVVRFRCRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120
                SW                    CRVCSQILPAFCRLSNNFPK+ FIYADIDECPE
Sbjct: 61  -----SW--------------------CRVCSQILPAFCRLSNNFPKLYFIYADIDECPE 120

Query: 121 TTEHIRYTPTFQFYRDGERVDEMFGAGEERLHDRLWLHS 160
           TT+HIRYTPTF FYRDGERVDEMFGAGEERLHDRLWLHS
Sbjct: 121 TTQHIRYTPTFHFYRDGERVDEMFGAGEERLHDRLWLHS 127

[Close]

BLAST of Spg013399 vs. ExPASy TrEMBL
Match: A0A1S3CH29 (thioredoxin-like 3-3 OS=Cucumis melo OX=3656 GN=LOC103500822 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.2e-58
Identity = 121/159 (76.10%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 1   MEDKEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVIKYGASCKALHY 60
           MEDKEKKGLEGTG  LPVN HGNLKSASSDQDFKDVLLQIKSSKTTAVI YGA       
Sbjct: 1   MEDKEKKGLEGTGSCLPVNHHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGA------- 60

Query: 61  HFSESSWIAFVISEPAGLRGIVVVRFRCRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120
                SW                    CRVCSQILPAFCRLSNNFPKVSFIYADIDECPE
Sbjct: 61  -----SW--------------------CRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120

Query: 121 TTEHIRYTPTFQFYRDGERVDEMFGAGEERLHDRLWLHS 160
           TT+HIRYTPTF FYRDGERVDEMFGAGEERLHDRLWLHS
Sbjct: 121 TTQHIRYTPTFHFYRDGERVDEMFGAGEERLHDRLWLHS 127

[Close]

BLAST of Spg013399 vs. ExPASy TrEMBL
Match: A0A5D3C5X7 (Thioredoxin-like 3-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00280 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.2e-58
Identity = 121/159 (76.10%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 1   MEDKEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVIKYGASCKALHY 60
           MEDKEKKGLEGTG  LPVN HGNLKSASSDQDFKDVLLQIKSSKTTAVI YGA       
Sbjct: 1   MEDKEKKGLEGTGSCLPVNHHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGA------- 60

Query: 61  HFSESSWIAFVISEPAGLRGIVVVRFRCRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120
                SW                    CRVCSQILPAFCRLSNNFPKVSFIYADIDECPE
Sbjct: 61  -----SW--------------------CRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120

Query: 121 TTEHIRYTPTFQFYRDGERVDEMFGAGEERLHDRLWLHS 160
           TT+HIRYTPTF FYRDGERVDEMFGAGEERLHDRLWLHS
Sbjct: 121 TTQHIRYTPTFHFYRDGERVDEMFGAGEERLHDRLWLHS 127

[Close]

BLAST of Spg013399 vs. ExPASy TrEMBL
Match: A0A6J1HH85 (thioredoxin-like 3-3 OS=Cucurbita moschata OX=3662 GN=LOC111463526 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.9e-58
Identity = 121/159 (76.10%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MEDKEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVIKYGASCKALHY 60
           MEDKEKKGLEG GLD  VNRHGNLKSASSDQDFKDVLLQIKSSKTTAVI YGA       
Sbjct: 1   MEDKEKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGA------- 60

Query: 61  HFSESSWIAFVISEPAGLRGIVVVRFRCRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120
                SW                    CRVCSQILPAFCRLSNNFPKVSFIYADIDECPE
Sbjct: 61  -----SW--------------------CRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120

Query: 121 TTEHIRYTPTFQFYRDGERVDEMFGAGEERLHDRLWLHS 160
           TTEHIRYTPTF FYRDGERVDEMFG GEERLHDRLWLHS
Sbjct: 121 TTEHIRYTPTFHFYRDGERVDEMFGTGEERLHDRLWLHS 127

[Close]

BLAST of Spg013399 vs. ExPASy TrEMBL
Match: A0A0A0KH96 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G446490 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.9e-58
Identity = 121/159 (76.10%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 1   MEDKEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVIKYGASCKALHY 60
           MEDKEKKGLEGTGL LPVN HGNLKSASSDQDFKDVLLQIKSSKTTAVI YGA       
Sbjct: 1   MEDKEKKGLEGTGLCLPVNHHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGA------- 60

Query: 61  HFSESSWIAFVISEPAGLRGIVVVRFRCRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120
                SW                    CRVCSQILPAFCRLSNNFPKVSFIYADIDECPE
Sbjct: 61  -----SW--------------------CRVCSQILPAFCRLSNNFPKVSFIYADIDECPE 120

Query: 121 TTEHIRYTPTFQFYRDGERVDEMFGAGEERLHDRLWLHS 160
           TT+HIRYTPTF FYR GERVDEMFGAGEERLHDRLWLHS
Sbjct: 121 TTQHIRYTPTFHFYRGGERVDEMFGAGEERLHDRLWLHS 127

[Close]

BLAST of Spg013399 vs. TAIR 10
Match: AT3G53220.1 (Thioredoxin superfamily protein )

HSP 1 Score: 161.8 bits (408), Expect = 4.6e-40
Identity = 87/156 (55.77%), Postives = 100/156 (64.10%), Query Frame = 0


Query: 6   KKGLEGTGLDL--PVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVIKYGASCKALHYHFS 65
           K+  EG  L+     N +GN+K A +DQ F  +L  IKSSK+ AVI YGA          
Sbjct: 3   KQESEGANLEFESKSNDNGNVKIAPNDQSFLTILDDIKSSKSPAVINYGA---------- 62

Query: 66  ESSWIAFVISEPAGLRGIVVVRFRCRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTE 125
             SW                    C VCSQILPAF +LSN+F K+ F+YADIDECPETT 
Sbjct: 63  --SW--------------------CGVCSQILPAFRKLSNSFSKLKFVYADIDECPETTR 122

Query: 126 HIRYTPTFQFYRDGERVDEMFGAGEERLHDRLWLHS 160
           HIRYTPTFQFYRDGE+VDEMFGAGE+RLHDRLWLHS
Sbjct: 123 HIRYTPTFQFYRDGEKVDEMFGAGEQRLHDRLWLHS 126

[Close]

BLAST of Spg013399 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 48.1 bits (113), Expect = 7.4e-06
Identity = 24/74 (32.43%), Postives = 38/74 (51.35%), Query Frame = 0


Query: 88  CRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTE--HIRYTPTFQFYRDGERVDEMFG 147
           C  C  + P +  L+    +V F+  DID+  +     +I   PTF F RDG+ VD++ G
Sbjct: 304 CGPCRYMSPLYSNLATQHSRVVFLKVDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVG 363

Query: 148 AGEERLHDRLWLHS 160
           A +  L  ++  HS
Sbjct: 364 ADKGSLEQKIAQHS 377

[Close]

BLAST of Spg013399 vs. TAIR 10
Match: AT3G17880.2 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 48.1 bits (113), Expect = 7.4e-06
Identity = 24/74 (32.43%), Postives = 38/74 (51.35%), Query Frame = 0


Query: 88  CRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTE--HIRYTPTFQFYRDGERVDEMFG 147
           C  C  + P +  L+    +V F+  DID+  +     +I   PTF F RDG+ VD++ G
Sbjct: 297 CGPCRYMSPLYSNLATQHSRVVFLKVDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVG 356

Query: 148 AGEERLHDRLWLHS 160
           A +  L  ++  HS
Sbjct: 357 ADKGSLEQKIAQHS 370

[Close]

BLAST of Spg013399 vs. TAIR 10
Match: AT2G42580.1 (tetratricopetide-repeat thioredoxin-like 3 )

HSP 1 Score: 46.2 bits (108), Expect = 2.8e-05
Identity = 27/83 (32.53%), Postives = 40/83 (48.19%), Query Frame = 0


Query: 78  LRGIVVVRFRC---RVCSQILPAFCRLSNNFPKVSFIYADIDE--CPETTEHIRYTPTFQ 137
           L G+ V  F+    R C +I P    L   +P V F   D++E       E IR  PTF+
Sbjct: 604 LPGVSVFHFKSSSNRQCEEISPFINTLCLRYPLVHFFMVDVEESMALAKAESIRKVPTFK 663

Query: 138 FYRDGERVDEMFGAGEERLHDRL 156
            Y++G++V EM     + L D +
Sbjct: 664 MYKNGDKVKEMVCPSHQFLEDSI 686

[Close]

BLAST of Spg013399 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 46.2 bits (108), Expect = 2.8e-05
Identity = 27/83 (32.53%), Postives = 40/83 (48.19%), Query Frame = 0


Query: 81  IVVVRFR---CRVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEH--IRYTPTFQFYR 140
           +VVV F    C  C  I P F  L+   P V F+  D DE         I+  PTF F +
Sbjct: 30  LVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLK 89

Query: 141 DGERVDEMFGAGEERLHDRLWLH 159
           +G+ +D++ GA ++ L   +  H
Sbjct: 90  EGKILDKVVGAKKDELQSTIAKH 112

The following BLAST results are available for this feature:

BLAST of Spg013399 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143884.1	1.2e-58	76.10	thioredoxin-like 3-3 [Momordica charantia]	[more]
XP_008462474.1	4.6e-58	76.10	PREDICTED: thioredoxin-like 3-3 [Cucumis melo] >XP_008462475.1 PREDICTED: thiore...	[more]
XP_011657665.1	6.0e-58	76.10	thioredoxin-like 3-3 [Cucumis sativus] >XP_031742982.1 thioredoxin-like 3-3 [Cuc...	[more]
XP_022963258.1	6.0e-58	76.10	thioredoxin-like 3-3 [Cucurbita moschata] >XP_022963259.1 thioredoxin-like 3-3 [...	[more]
XP_022972722.1	2.3e-57	75.47	thioredoxin-like 3-3 [Cucurbita maxima] >XP_022972723.1 thioredoxin-like 3-3 [Cu...	[more]

BLAST of Spg013399 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XSQ7	1.4e-44	58.60	Thioredoxin-like 3-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560200 PE...	[more]
Q8LCH9	6.5e-39	55.77	Thioredoxin-like 3-3 OS=Arabidopsis thaliana OX=3702 GN=At3g53220 PE=2 SV=1	[more]
P85801	1.1e-09	37.08	Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1	[more]
O43396	4.5e-08	37.50	Thioredoxin-like protein 1 OS=Homo sapiens OX=9606 GN=TXNL1 PE=1 SV=3	[more]
Q8CDN6	4.5e-08	37.50	Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3	[more]

BLAST of Spg013399 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQN4	5.9e-59	76.10	thioredoxin-like 3-3 OS=Momordica charantia OX=3673 GN=LOC111013691 PE=4 SV=1	[more]
A0A1S3CH29	2.2e-58	76.10	thioredoxin-like 3-3 OS=Cucumis melo OX=3656 GN=LOC103500822 PE=4 SV=1	[more]
A0A5D3C5X7	2.2e-58	76.10	Thioredoxin-like 3-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202...	[more]
A0A6J1HH85	2.9e-58	76.10	thioredoxin-like 3-3 OS=Cucurbita moschata OX=3662 GN=LOC111463526 PE=4 SV=1	[more]
A0A0A0KH96	2.9e-58	76.10	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G446490...	[more]

BLAST of Spg013399 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53220.1	4.6e-40	55.77	Thioredoxin superfamily protein	[more]
AT3G17880.1	7.4e-06	32.43	tetraticopeptide domain-containing thioredoxin	[more]
AT3G17880.2	7.4e-06	32.43	tetraticopeptide domain-containing thioredoxin	[more]
AT2G42580.1	2.8e-05	32.53	tetratricopetide-repeat thioredoxin-like 3	[more]
AT3G51030.1	2.8e-05	32.53	thioredoxin H-type 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 15..157 e-value: 9.2E-14 score: 53.2
None	No IPR available	CDD	cd02947	TRX_family	coord: 80..155 e-value: 3.49357E-16 score: 67.5833
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 83..151 e-value: 8.0E-8 score: 32.2
IPR044193	Thioredoxin-like 3-3	PANTHER	PTHR47571	THIOREDOXIN-LIKE 3-3	coord: 3..55 coord: 88..159
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 20..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg013399.1	Spg013399.1	mRNA