Spg013196 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg013196
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	FACT complex subunit SSRP1
Location	scaffold1: 20454754 .. 20466262 (-)
RNA-Seq Expression	Spg013196
Synteny	Spg013196

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGACGGTCAGCTCTACAACAATATCTCTCTTGGCGGTCGTGGAGGCACTGTGAGCTCTCTTTCTCTTTGTGTGGATGGTTGCTTAACTAGGTTTCTTGGTGTAGTTGGATCGTTGTATTTTGTATGGGAATGGGGATGCTGTTATGCTTTTCAAACACTAAGTTTTGAACTGTTCCTAAATTCTGTATGTATTTACATGGTGGTTTTGTTTTGTGAAATGAAAAGTGATGAGCTGATTTCTTTACATTTTCTCAAATTTTTGTGTCTTTCTGCACCTCCACGTGGTGCAGCGATGTTCAAATAGCCAGAATGATTAGTTCTTTTCAATGGTCTTTCAGCTTTTGTTTTGACGTAATTCTTCTTGGTGAATTTGTTTGGGGAAGGGATCTGCTGGTAATTTATTTCACGTGTTCTTGAAATTCTCAAATTTCACAAATTTGATGGGGTTGTTATTTTTTCCGAATGTCATCTGTTTGGAGCATGGGGGTAAAGGGTTATATTTTGGACTCTGTAGTTTTTTTTATCCTTGGCATCTCACTTGTTGCATTCAGTGAAGTATTTTTGGAGGATACAAGGTGAACAAAGGAAACGAAATGATCTTTAATAGTTATAGTTTTCTGATCATGCTTTTTGGGCTTCTTTGAAAGTTTGAAATGATAAACATATATATTTTAATGCAGAACCCTGGTCAACTTAAAACAGATCAAAGAGGTATTCAGTGGAAGAAGCAAGGAGGTGGCAAAGCAATTGAGGTGGATAAAGCAGACATTACTAGTGTAACATGGATGAAGGTCCCAAGGACAAACCAATTAGGAATTCGAGTCAAAGATGGATTGTATTACAAGTTCATTGGATTCCGCGACCAGGTTTACCGAATTTTTAACTGTGATATTGCTTTTATGTCTATTGACTTTGGAATCTTGGTATAAATCTCAAGATGTTAATATCTCATTTACATTGTGGCGTGAAGTCATAATTCGCTAAATCATTGCCTTTAGTTAGTGGATAGCTTTCTAGATTGTTGGTCCATGTCATCTGATCAACAGCAGTAGAACGAGATGAGATGATTACAAATTAATATTTTGAGAACTTTCGTATTTCTTATGATGTAGTTGAACTGTTCTGATTGTATGACATTTTTTCTTAATGTAGGACATCACTAGTTTAACCAAATTTTTCCAGAGTAATTGTGGAATAACACCAGAGGAAAAACAGCTTTCTGTCAGTGGTCGTAATTGGGGTGAAGTTGATTTGAATGGTAAGTTGTTCTGATGCATTCAGTCTTTCACTTGTTGCACTTGTAGTTTATTACTCGTCATTTTCTTGTGGTTATCAATTTTATATCCAAAGAACTCTTACTTTATTTACATGTTTAATATTGCAACTTTAGAGCTCTTAGAAGAGATTAGAAGGATCTTAAGAAACCACCAAGCTTGGTTTGCAACTATACCATATTGGCAATTAGCTCTAGCTTACATTTCCTTGAGTTTTTATATTTCTACCCTGAGCTTTTATGCAAATCAATTATGGTAGCCATCTCTCTGCAAAATAATTTTTTGAGGTTAAGCCTATCTTCTTTTAATTATTAAAACTTGTGGTGTAGGGAATATGCTTACTTTCTTGGTTGGTTCAAAGCAAGCATTTGAAGTGTCATTAGCTGATGTTGCTCAAACACAACTTCAAGGGAAGAATGATGTTATGTTAGAGTTTCATGTGGATGATACCACAGGAGCTAATGAGGTCAATGATTATGTTCTCTTTGTTTTAAATAGTTTTTGTGCTTGTTCCCTGCCAATTGATGAGCGATACAGTATCTGATATCTCAAATTGCAAAGCTTTTGTTGTAGATTGCTTCATTGTAATCTAAGTGTTTTAACATTATGATTTTATGATCACAGAAAGATTCTCTAATGGAGATAAGTTTTCACATACCAAATACCAATACTCAATTTGTTGGTGATGAAAATTGTCCTCCTGCTCAGGTAGTATCATTATCTGTTTCAGACTACAACACATATTTTTTGTGATTGTTTATGAAGTATTCTTTAGTATAGGTTTTTCGTGACAAAATCACTTCCATGGCGGATGTTGGTCGGGGCATTGAGGAAGCTGTGGTCACATTTGAGGGTATTGCGATCCTCACTCCAAGGTAGGTATTTATTGAGTGGAAATGTAGTCTGCATGCTGCTTGTTATGTGCCGTACATGCATAGAAGTATCATAGCATGCACATGTATTTATTTGATTAGCTTGCATCATTTCTTCTGATTTTTTTTAATGTTGGCTTTTAGGTTTTTTCTATTGTCTTAAGGTATTCTAAAGAGGTTACTTTTGTTGTATAGGGGTCGGTACAGTGTTGAACTCCACGTTTCTTTCCTGCGGCTCCAAGGACAAGCCAATGACTTCAAAATTCAATACAGCAGTGTTGTTCGTCTTTTTCTACTTCCAAAGGTTTTTCTTCTTCACTTCTATTGACCATGGATGTTAGACTATCTAAACCAGTCAATCAATAAGATATGGAGTCTTACGTGCTTGTGATGTTCTGTGCAGTCCAATCAGCCACATACTTTCGTTGTTGTGACTCTAGATCCACCAATCCGTAAAGGCCAAACTTTATACCCTCATATTGTTTTGCAGGTGTTTGTCACTTCATTGGTTAAGATTTCTCTGCATGTACTTCTTAGGATAACGTTTTGTTCTTATGCATCTTTGCAGTTTGAGACTGACTATGTGGTTCAAAGCACCTTGCATTTTGCCGATGAACATCTCTACACAAAGTACAAGGACAAGTTAGAACTTTCTTATAAGGTATACATTTTTTTTAATTTTTTTTTTATAAGAAACAAAATGTATTCAGAAAAAAGAGAAAGAAGATACAACCTAGGGGCTGGCGGTTGAAGAACCCCCACCAATAGTACCTTCTTATGAGGTAGAAAATTGCTTCTCCCTCCAAACAATAAGCCATCTGCACTATAGATCGAAGGAACACAAATACGGACACAACATGAAATGAACACAGTGGCACATTATTTTCTAAAAACATAGGACATTGGCATGACAAAGACAATTACTAGATACATTTTTTAAACATATATTATTTTTATACAATACCAAAGGAAAATTTAAAGTCAATAAGGCATTTTTATTTTTTTAAATAAACAAGGTTGATGTTACACTCAAAATATTTATTAATTTAGTCATATATTACTATTTTTCTATTTGTAAGCAGTAAATAAAAGAATAGAAGTTCATTTGGTGTATTGGAATGCTTTTTTTAAAATTCCATTGACATGGGTTTTCATCCTCCAAGAAGCACGCCTACGGACATACGACACGGATACGACATGGACATGGCGACACACCAATTTTCATAAGTGTAGGACAGACACATTGAGGACACGTTAGTTTTTTTTTTAAAAAAAAATACATGCATGCGTGTGCATAGTTTGACATACCATGCAATATCTAACCTCCTTAATTCTAATATGACTTTTGGTGTGGTGAGAAGAAAATTCTTATCTTAAATTAATTGATTTATTATATTCAATTAGAAGTATATACTCAGATATGAAAAAAAAAAACCCTTCTGTACATGGCATGGAGTAGTCAACTCAAATTAAAATCAGTCCTCTCTCACCCACAAATAAAACAAATAAAATCAGTCCTCTCCTCAAACAAACAACAATAGTTCTTCAAGAGCAAGCACAATCTGGCTTTCACTGTCAAATAAAGTATTAGGTATCCAACCTCCTTAACCTGCAAGAAACTTAAGAAAACACACAAACAACACGAAAATGGAGAGAAATGGACCCAACTCTGCTGTATTGAGGGGTTCTTCAATACACAAAGGGGTTTTTAGCCGTTTGATATTGATAAACCAAAATAAGAACAAGAACAAGGATTCCCAGCATTCGAGAGGCTGGTTCTCTCCCTCTCAGACCACTCTCAGCCTAAGACAAAATGATCCCTGCCCTCCCAACATTCCCTGCATTCGTATACATCATTCCCTCACTCCCACACTCCCCGTGGTCCCCACAGCATCCTCTTCTACCGTTTCTCTCTTTTCTCTATTTTACCCTTTCTCTTATAAACACGTGTGACAGAAGGCCTAACAATACCCTCCGGGTTCAGATTCACCTTGTCCTCAAGGTGGAAATTAGGAAATTGGCCTTTGATGATCGCGACTATCTCCCAAGTTTCATCACACACTTGCTGGTCTTTCCACTGAATCAACCATTCCTCAACATTCCTCTCATCGTTCCATCGAATTCCCAACCGTGCTGCTGGTTCAATCATCCACTCAAAAGTCTTCAGATAGGGGTGGCAAGTCATTGTGAACCTCCAACTGCTGTCCCACAGCTTTCTTCAACTGAGATATATGGAAAACATCATGTATCATTGTTGAACTTGGAAGTTCAAGTTTGTAAGCAACCGGACTAACCTTCTTAATCACCTGGTACGACCCATAAAAACGAGGAGATAGTTTTTCACACTGGCGTTTGGCTACTGGTTTTTGTCTATTTGGTCTAATTTTCAAGTATGCCCAGTCACCTTCCATCAGTTTCACATCCCTGCGCTTTTTGTCAGCCTGTTTCTTCATTCTTTCTTGAGCTAATCTCAGTTGCTCCTTTAATTGAAGCAATTGTCTGTCTCTATCAATGAGCTGTTGTTCTAAAGAATCGTTCGTAGTTTTCTGATCCCCATAGGAAATCAGCGGTGGTGGCTGTCTTCCATAAACCACATTAAAAGGAGTAGTATTAATGGATGTGTGGAAGGTGGCGTTGTACCAAAATTCAGCCCACGCCAGCCATTGCACCCACTTCTTTGGTTCATTGCAGTAGCAACGCAAATACGTCTCGAGGTAGTGATTAACTCTCTCTGTTTGGCCGTCAGTCTGTGGGTGGAAGGTTGTGCTTCGCCTTAATTGAGTCCCTTGAATTCGAAAAATCTCATTCCAGAAGTGACTCACGAATATCTTATCACAGTCAGAGACTATGGACCTGGGAAACCCGTGCAATCGCACTATCTCCTTGATGAAGGCCGCTGCCACTATTTTGGCTGAAAAAGGATGCTTCAGTGATATGAAGTGAGCATACTTGCTCAATCTGTCCACCACTACCACAATAGTGTCTACCCCTTGAGAAACCGGTAATCCTTCAATGAAATCCATAGAAACATCTTCCCAAATCTTATCAGGACGCGGCAAAGGTTGGAGTAACCCCGTTGGGGCCACCGATTCTGATTTGTTAACTTGGCAAGTTACACACTTCTCCACATATTTCTTCACATCATTTTTCATCCCCTTCCAGTATAACTCTCCAGTCAACCGTTTGTATGTTGGAAGAAAGTCTGAATGTCCTCCCACTACTGAGTCATGAAATGTATGTAAAAGTGCAGGGATTAGTTTGGACTTACTTGACAAGACAAGTCTTCCTTTATAGTGAAGCCTTCCATGAACAAGAGAGAACTTCGGGTGGCTGAGGGAGTCTTCCTGCATTTCCTTGTGAATCAGCTACAGTTCAGGGTCTTGTTCCACCTCCTTTTGGACTACTTCTAGGTCAATCAATGAGGGAACTGCTAGGGCCATCAGTTCGCTCGTAGGTGGCATCCTAGATAAGGCATCAGCTGCCTCGTTGAGTAGCCCCAGGTGGTACTTGATTTCAAAGTCGTAACCCAGCAGTTTAGTTAACCACTTTTGATACTCTGGCTGAATTTTCCTTTGCTCCAACAAATGTCTCAAAGCTCGTTGGTCGGTCAAAACTGTAAACTTTTGTCCCAGTAGGTAATTATGCCACTTCTGTACTGACAACACCACAGCCATCAGCTCACGCTCATACACAGACTTCGCTTGGGATCTGGCACTCAAGGCTTGGTTGGAAAATGCTATAGGTCTTCCCTTCTGAGTCAGTACCGCCCCAATTCCAAACCCGGAGGCATCTGTTTCGATGTTGAAAGACATTGTGAAGTCTGGTAGCGCCAAAACGGGTAAGGAGATCATGACTTGTCTCAGAGTTTCAAAGGCGATGCCTGCTTCATCATTTCAGTTGAATGAGTCTTTTTTGAGCAACCGAGTTAAAGGGGTAGCCAAGGCTCCATAGTTCTTCACAAAACGACGATAGTATCCAGTCAGACCTAAGAATCCTCTTAGCTCCTTGACGGATTTAGGTGTAGGCCACCACAACATTGCTCGAATTTTCTCATGGTTTGCTTCTACACCTTGTGCGGATACCCAATGCCCTAGATATTCCACACGGCTCCTGGCGAAAACACATTTCTTTCGGTTTGCAAACAGAGCACTGTCTCGCAATGTCTCAAAGACTATGACTGGTTTTCTCCCTCTCAGACCACTCTTAGCCTAAGACAAAATGATCCCTACCCTCCCAACATTCCCTGCATCCGTATACATCATTCCCTCACCCCCACACTCCCCGTGGTCCCCACAACATCCTCTTTTAACCGTTTCTCTCTTTTCTCTATTTTACCCTTTCTCTTATAAACACGTGTGATAGGAGGCCTAACATAAAGCTGCAACCAATCTCTCTCTCAACGACAGCTACGACGAAGGAAAAAGAAGATCCCATCAAATAGGTATGGTTTATTTCACAGGTGTGGGTGTGATGGCAAGGATCTTCAATCTTTCTCAAGTAGTGATACATTCCCTTCTTCAATCATTTAGAGTTCTTTCTTCTATCACTTAGGGTTTTAATAAGATGAGTTAGACTCTTTATCTATGGAAAGTTATACTTTTTTTTTCTCTCCTCACCCGTGTCCGAAAAGTGTCTCAAATGTATCCCAACGTGTCCAAAAATGAAAAAAAAGGTAATAAAAAAACAGACACTTAATTTGATGTAAGTGTGTCCGTGTCCTACACTTATATCAATGGAATATGAGCTTCCTTTTAAAAAAAGTTTGAATACTTTAACTCTTTGGTTTAATAATTGTTTGTCATATGCTTTCAAGTGTCTGATATGAGTTGATTATGAACAAGTGTTGAGAATATGCTCAACAAGTATTGGAGTCTTATTCAATTTGTTGAACTAGTATTTGCAAGTTTACGAGTATCTAATATGTGTTCAACAAGTGTTGGAGTGTTAAATATTGTTGGACGTGGATATGTTACCCTACCGCTAAAGACAGATAACCTATGGCATATGTTTTTAAGGACATGGAAACATGCTATATTGTTTTATTTACAGGAGTATCTAGCAAGGTGTTTAGACTTGCTGATTCCATGTTTCTCTCAGTGAATAGTTTTGTTGAAAACAGGGGCTGATTCATGAGGTATTTACCACCATATTGCGTGGTTTATCTGGTGCGAAAATTACCAGACCTGGAAAGTTCCGCAGCTGTCAAGATGGTTATGCTGTCAAGTCATCTTTGAAAGCTGAAGATGGTGTCTTATATCCACTTGAGAAAAGTTTCTTCTTTCTTCCTAAGCCTCCTACCCTTATTCTTCATGAGGAGGTATAATTTCCACATTGGAATCTTGCATTTTCTGACATCATTTGATGGTTCAATCCAATGAGTTGACGAGTTGCTTACCTTTTTCATAAAATACTTTTGCAATAGATTGACTATGTTGAATTTGAGAGGCATGCTGCTGGTGGGTCCAATATGCATTACTTTGATCTTCTTATCAGACTGAAAACTGAACAAGAACATCTCTTTAGAAATATCCAGAGGAATGAATACCATAATCTTTTTGACTTTATCAGGTGAGTCTAATTTTCTTACCTTGTATGTATGGAGGTGTCTTTTATTACATTTGATCTTATTTGTTCATTCCTGCAGTGTGAAGGGTTTGAAAATCATGAATCTGGGAGATGCCAAGGCTAGAGATGGTGTGGCAGCTGTTCTCCAAGAGGATGATGATGATGCTGTTGATCCACATCTTGAGCGTATTAGAAATGAAGCCGGTGGAGATGAGAGCGATGAAGAGGTAAGCTTTGACCTATTTAGTACTGCAATTAGGGATTCTCTTTCAATAGTGGTAAATACTAGGCCTACTGTTCATTTTACGTAGGAGGCATATGAAAGTTTACTTCACTGCCAGTTAATGTCAGGTGGTTGTAACTATTTAGGCTGTTGTATTGGCTAATGTGGCTGTTGGTACCAAGTTGGGTAGTGTGATAGTTGAGTGTTCTAAAAAGGCTGGATGAGGTTAAGATTGCTAGAAGAGGGGATGTGTAGGAATGGTAGAGGGAGAACTCATGCCTACTGAAATTTCTGGAACTTGTAACTTACTCTGGCTTGTACAACCTTAGGCAATTCTTATCTATCTTTTCATTCTGGGGTTCAATCCGATTGCAATTTTCTACTTGTCTTGGGCATGTTTGTTGGATTAAAACAATTGATGGCTTCATAGATATGTGCCACTGCCATTGTAGACTGAGGATTTCAGAATTGTTATTTGTAGTTATGGGAAAGGATATGTAGTTACAAAACAATTTAATTGATATATGCTTCCCTTTTAACCAATTGGGGAAACCTTTTGTAATCATCATGGATTAATTATCCTTTTTGTAAATTTCATATATTAATGAAATTGTTTCTTATAAAAAAAAAAAGTTATGGGATAGGATAGGTAGGAAGCACATTGGCAGTTTAAGGCTGTTATCCATTTGTTCTAGAGTGTTTTAAGGTTGTAAGGAGAGATTTTTGGCCTTTTCCAAGGGCCACAACAACTATGAATTTAATCTCCCTCTGGATGAGCGTTTAATAATTACAGTTCGTATGTCCCCCTTAGGGCTTCCATCACTAAGGACTTGGGGACTGTTTGGGACGCTGAATTGGTTATAATATCTGGTGGTTATAATAACCTGGGGATTATAATAGTCTGGAGGTTATAATAATCTGTGTTTGGAGTGCAGATTATTATAGTCTGGGATAAAATAATATGTGTTTGGGGTGCAGATTATTTTAGTCTGAGATAAAATAATCTGTGTTTGGGATGCAGATTATTTTAGTCTGTGATTGGAGTGCTGATCTGTTTTAACATGGGGTTCTGAATCAAAGGTTCAAATTGACTGTTTTCTTTTTCTATTTTTTTTTTTATTTTTTATGATATACGATTCACTTTGGTTTAGGGTTATGTTTTTTTTTTTTTACAAAACAAAAAAGTTTAGGATTTGGTATAGAAAAATCATATTAGTTAACTTTTAATAAATGTTTAGTTCAAAAATCATATTAGTTTTTTTTATTATTATTTTTATCAATAAAATCATTTGAAATAAACTTGAGTGTGGTAAATACAATTTCGTTTGAATGTTCTTTCTTTTTTTTAAAGTTGGTTAACCTTCGATGTTGTCAACGACTTTTCCGGCAACCTTCGATGTTTTTTTTTCTTTATTTTCATTTTTTATATTTTTCAAAATGAAAATGAGAAGAAATATGAAAAAAAAGAAAAAAAAAATCGGTGGCCGGAAAAGTCGTCGGCGATCGCCGGAAAAGTCGTCGGTGATCGCCGTAAAAGTTGTCGACGGCCATCGGAAAGGTCGCTGGAAACTTCGCCGGCCGACGGCAATCGGCGGTCGTCGGAAAAGTCAAGGAGTCGCATGGAAGTAGATAGGAGAGAGTTATTGTAGAAAATGGATAGAATAATCGGGTGGGTTGAATGATGGTTACTGTAGAGAATGGATAAAATAATCGGGGGTAAAAATAACCCACCTCACCATTTATTTTTGTTGATGCCCCAAACACTGAATAGGTTATAATAAATAGGTAATAAAGGGGGTTATTATAACCTATTCAGTGCCCCAAACACCCCCTTAGTGATTATCCCTTATTTATCTTTCTTTTGGATTGGATCCCATTTTTGTAATCTTTCTTGTGTTTTTTCTGTTTTTTTTTTTCCGTTTCCCTTTCCCCATTTTTTGGTCCATGCTTTCCTTTGTTTGTATTGCCCTCGTGTAGTCTTTCATTCTTTTCCTCCAAAAAAACACAGTTCATATCAGATACTTTTTATTTATTCTTGACACAGGTGCTTTTGGATTCCCCTTGTTGTGTTTGGTGGTTCATTTATTATATTTATGCCTCTGAAATCCCAATGGGTTGTACATACTGGCTAAATGACCTTTTATTCAGTTGGATTTTATACGTTTTGAAACTCTTTACATAAACTTTTTTGCACGGTTGCCCAATATTTTGTGGTCTTTGTGTATTTTTACTTACTGCACGTATGCAGTCCTTTCCAATCTTCTCATATGTATGAAGTTCTGAATTTACTGTACATATCTATATCATTGTGTTCTAATAAAATTACGATCATAGATCTTTATTTATGCCTTTTGGTATTCATGTTCAACTCCATATAATATGGTAGCGTTTATGTAGGATTCGGATTTTGTGGTCGACAAGGATGATGGGGGTTCTCCAACTGATGATTCAGGTGGGGAGGAGTCTGATGCTAGTGATAGTGGCGGTGAAAAGGAGGTCAGCAATATTTTCTGTTGAGTTGAATATATACTTGCATTCTATATTATAGCTAACTGAACTTTGTTTTTTTAGAAGCCTGGGAAAAAGGAGGCCAAAAAAGACCCTTCAGCTTCCAAAGCACCTGCCAAGAAGAAACCTAGAGAAGGGACTGAAGATGGTTCAAAGAAGAAAAAGCAGAAAAAGAAAAAGGATCCAAATGCACCTAAGAGGGCAATATCTGGTTTCATGTTCTTCTCTAAGATGGAAAGAGAGGTGATTTCTCACTTGTATTCCCCCACCCCAATTCTAGGAACCTTTTTTTTTTTTGGTCTTCCTTTTATTTTAATTAATACCAGGAAAGGTAGTTTGCTTACCTGTATTTCCTCATTGCAGAATATAAAGAAAAGCAATCCTGGAATTTCTTTCACGGAATTAGGGCGAGTACTTGGAGATAAGTGGAATAAGATGTCGGGTATGTGTGCCTTTTCAATTTTTTGATTGGATCTCTTGCATCAAAGTGATATGTTGCCTTAAGCTAAGAAAGGAATCTGTACTTTAGCTGATCTTTTGCTGAGCCTTGATTAATTTACCTGCAGTGGAAGAGAAAGAACCATACGAAGCAAAGGCTCGGGATGACAAAAAACGATACAAGGAGGAAATCAGTGGCTACAAGAATCCACAGCCAATGAATATAGATTCAGGGAATGAATCTGACAGTGCATAGATGATAAATCAATACCCAGTTCTTTATTGGATCATTCCTATAGTTCTTTTTCCGTGTATATTGCCAGAGACCCGTTTTGTATTGTATGGAACTTTCTAGCTGAATGGCATTTACATGTACTAGGTGTTGTACCATGTTGTATTAGCATAACATAACATAGTTCAGTTCAGGGTTATTTGAGGAATCCCAAGTGTTGAGCGCGTAGAGGTTGGTTATGGCTTCTAATGTGTGCATTTTTTTTTTCTTGAAGCAACTTGAGAGATTGAACAACCCTACTTGGCGGGCTTTAAGCTAATACAACCTTGTAAATAGTTAGAATTCTTTCTTTTTATGGAGTAGATTTGCTCTTTTATATTTTCTTCTAGCTG

mRNA sequence

ATGGCTGACGGTCAGCTCTACAACAATATCTCTCTTGGCGGTCGTGGAGGCACTGTGAGCTCTCTTTCTCTTTGTGTGGATGGTTGCTTAACTAGGTTTCTTGGTGTAGTTGGATCGTTGTATTTTGTATGGGAATGGGGATGCTGTTATGCTTTTCAAACACTAAGTTTTGAACTGTTCCTAAATTCTAACCCTGGTCAACTTAAAACAGATCAAAGAGGTATTCAGTGGAAGAAGCAAGGAGGTGGCAAAGCAATTGAGGTGGATAAAGCAGACATTACTAGTGTAACATGGATGAAGGTCCCAAGGACAAACCAATTAGGAATTCGAGTCAAAGATGGATTGTATTACAAGTTCATTGGATTCCGCGACCAGGACATCACTAGTTTAACCAAATTTTTCCAGAGTAATTGTGGAATAACACCAGAGGAAAAACAGCTTTCTGTCAGTGGTCGTAATTGGGGTGAAGTTGATTTGAATGGGAATATGCTTACTTTCTTGGTTGGTTCAAAGCAAGCATTTGAAGTGTCATTAGCTGATGTTGCTCAAACACAACTTCAAGGGAAGAATGATGTTATGTTAGAGTTTCATGTGGATGATACCACAGGAGCTAATGAGAAAGATTCTCTAATGGAGATAAGTTTTCACATACCAAATACCAATACTCAATTTGTTGGTGATGAAAATTGTCCTCCTGCTCAGGTTTTTCGTGACAAAATCACTTCCATGGCGGATGTTGGTCGGGGCATTGAGGAAGCTGTGGTCACATTTGAGGGTATTGCGATCCTCACTCCAAGGGGTCGGTACAGTGTTGAACTCCACGTTTCTTTCCTGCGGCTCCAAGGACAAGCCAATGACTTCAAAATTCAATACAGCAGTGTTGTTCGTCTTTTTCTACTTCCAAAGTCCAATCAGCCACATACTTTCGTTGTTGTGACTCTAGATCCACCAATCCGTAAAGGCCAAACTTTATACCCTCATATTGTTTTGCAGTTTGAGACTGACTATGTGGTTCAAAGCACCTTGCATTTTGCCGATGAACATCTCTACACAAAGTACAAGGACAAGTTAGAACTTTCTTATAAGGGGCTGATTCATGAGGTATTTACCACCATATTGCGTGGTTTATCTGGTGCGAAAATTACCAGACCTGGAAAGTTCCGCAGCTGTCAAGATGGTTATGCTGTCAAGTCATCTTTGAAAGCTGAAGATGGTGTCTTATATCCACTTGAGAAAAGTTTCTTCTTTCTTCCTAAGCCTCCTACCCTTATTCTTCATGAGGAGATTGACTATGTTGAATTTGAGAGGCATGCTGCTGGTGGGTCCAATATGCATTACTTTGATCTTCTTATCAGACTGAAAACTGAACAAGAACATCTCTTTAGAAATATCCAGAGGAATGAATACCATAATCTTTTTGACTTTATCAGTGTGAAGGGTTTGAAAATCATGAATCTGGGAGATGCCAAGGCTAGAGATGGTGTGGCAGCTGTTCTCCAAGAGGATGATGATGATGCTGTTGATCCACATCTTGAGCGTATTAGAAATGAAGCCGGTGGAGATGAGAGCGATGAAGAGGATTCGGATTTTGTGGTCGACAAGGATGATGGGGGTTCTCCAACTGATGATTCAGGTGGGGAGGAGTCTGATGCTAGTGATAGTGGCGGTGAAAAGGAGAAGCCTGGGAAAAAGGAGGCCAAAAAAGACCCTTCAGCTTCCAAAGCACCTGCCAAGAAGAAACCTAGAGAAGGGACTGAAGATGGTTCAAAGAAGAAAAAGCAGAAAAAGAAAAAGGATCCAAATGCACCTAAGAGGGCAATATCTGGTTTCATGTTCTTCTCTAAGATGGAAAGAGAGAATATAAAGAAAAGCAATCCTGGAATTTCTTTCACGGAATTAGGGCGAGTACTTGGAGATAAGTGGAATAAGATGTCGGTGGAAGAGAAAGAACCATACGAAGCAAAGGCTCGGGATGACAAAAAACGATACAAGGAGGAAATCAGTGGCTACAAGAATCCACAGCCAATGAATATAGATTCAGGGAATGAATCTGACAGTGCATAG

Coding sequence (CDS)

ATGGCTGACGGTCAGCTCTACAACAATATCTCTCTTGGCGGTCGTGGAGGCACTGTGAGCTCTCTTTCTCTTTGTGTGGATGGTTGCTTAACTAGGTTTCTTGGTGTAGTTGGATCGTTGTATTTTGTATGGGAATGGGGATGCTGTTATGCTTTTCAAACACTAAGTTTTGAACTGTTCCTAAATTCTAACCCTGGTCAACTTAAAACAGATCAAAGAGGTATTCAGTGGAAGAAGCAAGGAGGTGGCAAAGCAATTGAGGTGGATAAAGCAGACATTACTAGTGTAACATGGATGAAGGTCCCAAGGACAAACCAATTAGGAATTCGAGTCAAAGATGGATTGTATTACAAGTTCATTGGATTCCGCGACCAGGACATCACTAGTTTAACCAAATTTTTCCAGAGTAATTGTGGAATAACACCAGAGGAAAAACAGCTTTCTGTCAGTGGTCGTAATTGGGGTGAAGTTGATTTGAATGGGAATATGCTTACTTTCTTGGTTGGTTCAAAGCAAGCATTTGAAGTGTCATTAGCTGATGTTGCTCAAACACAACTTCAAGGGAAGAATGATGTTATGTTAGAGTTTCATGTGGATGATACCACAGGAGCTAATGAGAAAGATTCTCTAATGGAGATAAGTTTTCACATACCAAATACCAATACTCAATTTGTTGGTGATGAAAATTGTCCTCCTGCTCAGGTTTTTCGTGACAAAATCACTTCCATGGCGGATGTTGGTCGGGGCATTGAGGAAGCTGTGGTCACATTTGAGGGTATTGCGATCCTCACTCCAAGGGGTCGGTACAGTGTTGAACTCCACGTTTCTTTCCTGCGGCTCCAAGGACAAGCCAATGACTTCAAAATTCAATACAGCAGTGTTGTTCGTCTTTTTCTACTTCCAAAGTCCAATCAGCCACATACTTTCGTTGTTGTGACTCTAGATCCACCAATCCGTAAAGGCCAAACTTTATACCCTCATATTGTTTTGCAGTTTGAGACTGACTATGTGGTTCAAAGCACCTTGCATTTTGCCGATGAACATCTCTACACAAAGTACAAGGACAAGTTAGAACTTTCTTATAAGGGGCTGATTCATGAGGTATTTACCACCATATTGCGTGGTTTATCTGGTGCGAAAATTACCAGACCTGGAAAGTTCCGCAGCTGTCAAGATGGTTATGCTGTCAAGTCATCTTTGAAAGCTGAAGATGGTGTCTTATATCCACTTGAGAAAAGTTTCTTCTTTCTTCCTAAGCCTCCTACCCTTATTCTTCATGAGGAGATTGACTATGTTGAATTTGAGAGGCATGCTGCTGGTGGGTCCAATATGCATTACTTTGATCTTCTTATCAGACTGAAAACTGAACAAGAACATCTCTTTAGAAATATCCAGAGGAATGAATACCATAATCTTTTTGACTTTATCAGTGTGAAGGGTTTGAAAATCATGAATCTGGGAGATGCCAAGGCTAGAGATGGTGTGGCAGCTGTTCTCCAAGAGGATGATGATGATGCTGTTGATCCACATCTTGAGCGTATTAGAAATGAAGCCGGTGGAGATGAGAGCGATGAAGAGGATTCGGATTTTGTGGTCGACAAGGATGATGGGGGTTCTCCAACTGATGATTCAGGTGGGGAGGAGTCTGATGCTAGTGATAGTGGCGGTGAAAAGGAGAAGCCTGGGAAAAAGGAGGCCAAAAAAGACCCTTCAGCTTCCAAAGCACCTGCCAAGAAGAAACCTAGAGAAGGGACTGAAGATGGTTCAAAGAAGAAAAAGCAGAAAAAGAAAAAGGATCCAAATGCACCTAAGAGGGCAATATCTGGTTTCATGTTCTTCTCTAAGATGGAAAGAGAGAATATAAAGAAAAGCAATCCTGGAATTTCTTTCACGGAATTAGGGCGAGTACTTGGAGATAAGTGGAATAAGATGTCGGTGGAAGAGAAAGAACCATACGAAGCAAAGGCTCGGGATGACAAAAAACGATACAAGGAGGAAATCAGTGGCTACAAGAATCCACAGCCAATGAATATAGATTCAGGGAATGAATCTGACAGTGCATAG

Protein sequence

MADGQLYNNISLGGRGGTVSSLSLCVDGCLTRFLGVVGSLYFVWEWGCCYAFQTLSFELFLNSNPGQLKTDQRGIQWKKQGGGKAIEVDKADITSVTWMKVPRTNQLGIRVKDGLYYKFIGFRDQDITSLTKFFQSNCGITPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENCPPAQVFRDKITSMADVGRGIEEAVVTFEGIAILTPRGRYSVELHVSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLHFADEHLYTKYKDKLELSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISVKGLKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVVDKDDGGSPTDDSGGEESDASDSGGEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSVEEKEPYEAKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA

Homology

[Close]

BLAST of Spg013196 vs. NCBI nr
Match: XP_022153521.1 (FACT complex subunit SSRP1 [Momordica charantia])

HSP 1 Score: 1184.9 bits (3064), Expect = 0.0e+00
Identity = 615/687 (89.52%), Postives = 624/687 (90.83%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTVSSLSLCVDGCLTRFLGVVGSLYFVWEWGCCYAFQTLSFELF 60
           MADGQLYNNISLGGRGGT                                          
Sbjct: 1   MADGQLYNNISLGGRGGT------------------------------------------ 60

Query: 61  LNSNPGQLKTDQRGIQWKKQGGGKAIEVDKADITSVTWMKVPRTNQLGIRVKDGLYYKFI 120
              NPGQLKTDQRGIQWKKQGGGKAIEVDK+DI SVTWMKVPRTNQLGIRVKDGLYYKFI
Sbjct: 61  ---NPGQLKTDQRGIQWKKQGGGKAIEVDKSDIVSVTWMKVPRTNQLGIRVKDGLYYKFI 120

Query: 121 GFRDQDITSLTKFFQSNCGITPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180
           GFRDQDITSLTKFFQSNCGI PEEKQ+SVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD
Sbjct: 121 GFRDQDITSLTKFFQSNCGIVPEEKQISVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180

Query: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENCPPAQVFRDKI 240
           VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPN+NTQFVGDENCPPAQVFRDKI
Sbjct: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENCPPAQVFRDKI 240

Query: 241 TSMADVGRGIEEAVVTFEGIAILTPRGRYSVELHVSFLRLQGQANDFKIQYSSVVRLFLL 300
            SMADV  GIEEAVVTFEGIAILTPRGRYSVELH+SFLRLQGQANDFKIQYSSVVRLFLL
Sbjct: 241 MSMADVNAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLL 300

Query: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLHFADEHLYTKYKDKLELS 360
           PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTL   DE   TKYKDKLE S
Sbjct: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIGDELFNTKYKDKLEPS 360

Query: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420
           YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP
Sbjct: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420

Query: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISVKG 480
           PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFIS KG
Sbjct: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKG 480

Query: 481 LKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVVDKDDGGSP 540
           LKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEED DFV+DKDDGGSP
Sbjct: 481 LKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDEDFVLDKDDGGSP 540

Query: 541 TDDSGGEESDASDSGGEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKKKDP 600
           TDDSGG++SDAS+SGGEKEKPGKKE KKDPSASKAPAKKK R+G EDGSKKKKQKKKKDP
Sbjct: 541 TDDSGGDDSDASESGGEKEKPGKKETKKDPSASKAPAKKKSRDGAEDGSKKKKQKKKKDP 600

Query: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSVEEKEPYEAKARDDK 660
           NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS EEKEPYEAKARDDK
Sbjct: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYEAKARDDK 642

Query: 661 KRYKEEISGYKNPQPMNIDSGNESDSA 688
           KRYKEEISGYKNPQPMNIDSGNESDSA
Sbjct: 661 KRYKEEISGYKNPQPMNIDSGNESDSA 642

[Close]

BLAST of Spg013196 vs. NCBI nr
Match: XP_004147459.1 (FACT complex subunit SSRP1 [Cucumis sativus] >KGN59592.1 hypothetical protein Csa_002635 [Cucumis sativus])

HSP 1 Score: 1174.1 bits (3036), Expect = 0.0e+00
Identity = 612/687 (89.08%), Postives = 621/687 (90.39%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTVSSLSLCVDGCLTRFLGVVGSLYFVWEWGCCYAFQTLSFELF 60
           MADGQLYNNISLGGRGGT                                          
Sbjct: 1   MADGQLYNNISLGGRGGT------------------------------------------ 60

Query: 61  LNSNPGQLKTDQRGIQWKKQGGGKAIEVDKADITSVTWMKVPRTNQLGIRVKDGLYYKFI 120
              NPGQLKTDQRGIQWKKQGGGKAIEVDKADI  VTWMKVPR+NQLGIRVKDGLYYKFI
Sbjct: 61  ---NPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSNQLGIRVKDGLYYKFI 120

Query: 121 GFRDQDITSLTKFFQSNCGITPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180
           GFRDQDI+SLTKFFQSNCGI PEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD
Sbjct: 121 GFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180

Query: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENCPPAQVFRDKI 240
           VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDE+ PPAQVFRDKI
Sbjct: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDESRPPAQVFRDKI 240

Query: 241 TSMADVGRGIEEAVVTFEGIAILTPRGRYSVELHVSFLRLQGQANDFKIQYSSVVRLFLL 300
            SMADV  GIEEAVVTFEGIAILTPRGRYSVELH+SFLRLQGQANDFKIQYSSVVRLFLL
Sbjct: 241 MSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLL 300

Query: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLHFADEHLYTKYKDKLELS 360
           PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTL   DE   TKYKDKLE S
Sbjct: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIGDELFNTKYKDKLEPS 360

Query: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420
           YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP
Sbjct: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420

Query: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISVKG 480
           PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFIS KG
Sbjct: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKG 480

Query: 481 LKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVVDKDDGGSP 540
           LKIMNLGDA+ARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFV DKDDGGSP
Sbjct: 481 LKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVADKDDGGSP 540

Query: 541 TDDSGGEESDASDSGGEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKKKDP 600
           TDDSGG++SD S SGGEKEKPGKKEAKKDPSASKAPAKKK REG +DGSKKKKQKKKKDP
Sbjct: 541 TDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGADDGSKKKKQKKKKDP 600

Query: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSVEEKEPYEAKARDDK 660
           NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS EEKEPYE+KARDDK
Sbjct: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYESKARDDK 642

Query: 661 KRYKEEISGYKNPQPMNIDSGNESDSA 688
           KRYKEEISGYKNPQPMNIDSGNESDSA
Sbjct: 661 KRYKEEISGYKNPQPMNIDSGNESDSA 642

[Close]

BLAST of Spg013196 vs. NCBI nr
Match: XP_038905836.1 (FACT complex subunit SSRP1 [Benincasa hispida])

HSP 1 Score: 1173.3 bits (3034), Expect = 0.0e+00
Identity = 611/687 (88.94%), Postives = 622/687 (90.54%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTVSSLSLCVDGCLTRFLGVVGSLYFVWEWGCCYAFQTLSFELF 60
           MADGQLYNNISLGGRGGT                                          
Sbjct: 1   MADGQLYNNISLGGRGGT------------------------------------------ 60

Query: 61  LNSNPGQLKTDQRGIQWKKQGGGKAIEVDKADITSVTWMKVPRTNQLGIRVKDGLYYKFI 120
              NPGQLKTD RGIQWKKQGGGKA+EVDKADI  VTWMKVPR+NQLGIRVKDGLYYKFI
Sbjct: 61  ---NPGQLKTDPRGIQWKKQGGGKAVEVDKADIVGVTWMKVPRSNQLGIRVKDGLYYKFI 120

Query: 121 GFRDQDITSLTKFFQSNCGITPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180
           GFRDQDI+SLTKFFQSNCGITPEEKQL VSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD
Sbjct: 121 GFRDQDISSLTKFFQSNCGITPEEKQLCVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180

Query: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENCPPAQVFRDKI 240
           VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDE+ PPAQVFRDKI
Sbjct: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDESRPPAQVFRDKI 240

Query: 241 TSMADVGRGIEEAVVTFEGIAILTPRGRYSVELHVSFLRLQGQANDFKIQYSSVVRLFLL 300
            SMADV  GIEEAVVTFEGIAILTPRGRYSVELH+SFLRLQGQANDFKIQYSSVVRLFLL
Sbjct: 241 MSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLL 300

Query: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLHFADEHLYTKYKDKLELS 360
           PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTL   DE L TKYKDKLE S
Sbjct: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIGDELLNTKYKDKLEPS 360

Query: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420
           YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP
Sbjct: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420

Query: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISVKG 480
           PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFIS KG
Sbjct: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKG 480

Query: 481 LKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVVDKDDGGSP 540
           LKIMNLGDA+ARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFV DKDDGGSP
Sbjct: 481 LKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVADKDDGGSP 540

Query: 541 TDDSGGEESDASDSGGEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKKKDP 600
           TDDSGG++SD S SGGEKEKPGKKEAKKDPS+SKAPAKKK REGT+DGSKKKKQKKKKDP
Sbjct: 541 TDDSGGDDSDGSISGGEKEKPGKKEAKKDPSSSKAPAKKKSREGTDDGSKKKKQKKKKDP 600

Query: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSVEEKEPYEAKARDDK 660
           NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS EEKEPYE+KARDDK
Sbjct: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYESKARDDK 642

Query: 661 KRYKEEISGYKNPQPMNIDSGNESDSA 688
           KRYKEEISGYKNPQPMNIDSGNESDSA
Sbjct: 661 KRYKEEISGYKNPQPMNIDSGNESDSA 642

[Close]

BLAST of Spg013196 vs. NCBI nr
Match: XP_008443431.1 (PREDICTED: FACT complex subunit SSRP1 [Cucumis melo])

HSP 1 Score: 1171.4 bits (3029), Expect = 0.0e+00
Identity = 611/687 (88.94%), Postives = 621/687 (90.39%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTVSSLSLCVDGCLTRFLGVVGSLYFVWEWGCCYAFQTLSFELF 60
           MADGQLYNNISLGGRGGT                                          
Sbjct: 1   MADGQLYNNISLGGRGGT------------------------------------------ 60

Query: 61  LNSNPGQLKTDQRGIQWKKQGGGKAIEVDKADITSVTWMKVPRTNQLGIRVKDGLYYKFI 120
              NPGQLKTDQRGIQWKKQGGGKAIEVDKADI  VTWMKVPR+NQLGIRVKDGLYYKFI
Sbjct: 61  ---NPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSNQLGIRVKDGLYYKFI 120

Query: 121 GFRDQDITSLTKFFQSNCGITPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180
           GFRDQDI+SLTK+FQSNCGI PEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD
Sbjct: 121 GFRDQDISSLTKYFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180

Query: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENCPPAQVFRDKI 240
           VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDE+ PPAQVFRDKI
Sbjct: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDESRPPAQVFRDKI 240

Query: 241 TSMADVGRGIEEAVVTFEGIAILTPRGRYSVELHVSFLRLQGQANDFKIQYSSVVRLFLL 300
            SMADV  GIEEAVVTFEGIAILTPRGRYSVELH+SFLRLQGQANDFKIQYSSVVRLFLL
Sbjct: 241 MSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLL 300

Query: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLHFADEHLYTKYKDKLELS 360
           PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTL   DE L TKYKDKLE S
Sbjct: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIGDELLNTKYKDKLEPS 360

Query: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420
           YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP
Sbjct: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420

Query: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISVKG 480
           PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFIS KG
Sbjct: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKG 480

Query: 481 LKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVVDKDDGGSP 540
           LKIMNLGDA+ARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFV DKDDGGSP
Sbjct: 481 LKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVADKDDGGSP 540

Query: 541 TDDSGGEESDASDSGGEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKKKDP 600
           TDDSGG++SD S SGGEKEKPGKKEAKKDPSASKAPAKKK REG +DGSKKKKQKKKKDP
Sbjct: 541 TDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGADDGSKKKKQKKKKDP 600

Query: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSVEEKEPYEAKARDDK 660
           NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS EEKEPYE+KARDDK
Sbjct: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYESKARDDK 642

Query: 661 KRYKEEISGYKNPQPMNIDSGNESDSA 688
           KRYKEEISGYKN QPMNIDSGNESDSA
Sbjct: 661 KRYKEEISGYKNTQPMNIDSGNESDSA 642

[Close]

BLAST of Spg013196 vs. NCBI nr
Match: XP_023531857.1 (FACT complex subunit SSRP1 [Cucurbita pepo subsp. pepo] >KAG6588385.1 FACT complex subunit SSRP1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022232.1 FACT complex subunit SSRP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1169.1 bits (3023), Expect = 0.0e+00
Identity = 609/687 (88.65%), Postives = 621/687 (90.39%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTVSSLSLCVDGCLTRFLGVVGSLYFVWEWGCCYAFQTLSFELF 60
           MADGQLYNNISLGGRGGT                                          
Sbjct: 1   MADGQLYNNISLGGRGGT------------------------------------------ 60

Query: 61  LNSNPGQLKTDQRGIQWKKQGGGKAIEVDKADITSVTWMKVPRTNQLGIRVKDGLYYKFI 120
              NPGQLKTDQRGIQWKKQGGGKA+E+DK DI  VTWMKVPRTNQLGIRVKDGLYYKFI
Sbjct: 61  ---NPGQLKTDQRGIQWKKQGGGKAVELDKEDIIGVTWMKVPRTNQLGIRVKDGLYYKFI 120

Query: 121 GFRDQDITSLTKFFQSNCGITPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180
           GFRDQDITSLTKFFQSNCGI PEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD
Sbjct: 121 GFRDQDITSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180

Query: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENCPPAQVFRDKI 240
           VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDEN PPAQVFRDKI
Sbjct: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENHPPAQVFRDKI 240

Query: 241 TSMADVGRGIEEAVVTFEGIAILTPRGRYSVELHVSFLRLQGQANDFKIQYSSVVRLFLL 300
            SMADV  GIEEAVVTFEGIAILTPRGRYSVELH+SFLRLQGQANDFKIQYSSVVRLFLL
Sbjct: 241 MSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLL 300

Query: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLHFADEHLYTKYKDKLELS 360
           PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTL   DE L+TK+KDKLE S
Sbjct: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIGDELLHTKFKDKLEPS 360

Query: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420
           YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP
Sbjct: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420

Query: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISVKG 480
           PTL+LH+EIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFIS KG
Sbjct: 421 PTLLLHDEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKG 480

Query: 481 LKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVVDKDDGGSP 540
           LKIMNLGDA+ARDGVAAVLQ DDDDAVDPHLERIRNEAGGDESDEEDSDFVV+KDDGGSP
Sbjct: 481 LKIMNLGDAQARDGVAAVLQADDDDAVDPHLERIRNEAGGDESDEEDSDFVVEKDDGGSP 540

Query: 541 TDDSGGEESDASDSGGEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKKKDP 600
           TDDSGGE+SDAS SGGEKEKPGKKEAKKD SASK PAKKKPREGT+DGSKKKK KKKKDP
Sbjct: 541 TDDSGGEDSDASVSGGEKEKPGKKEAKKDHSASKPPAKKKPREGTDDGSKKKKPKKKKDP 600

Query: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSVEEKEPYEAKARDDK 660
           NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS EEKEPYE+KARDDK
Sbjct: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYESKARDDK 642

Query: 661 KRYKEEISGYKNPQPMNIDSGNESDSA 688
            RYKEEISGYKNPQPMNIDSGNESDSA
Sbjct: 661 IRYKEEISGYKNPQPMNIDSGNESDSA 642

[Close]

BLAST of Spg013196 vs. ExPASy Swiss-Prot
Match: O04235 (FACT complex subunit SSRP1 OS=Vicia faba OX=3906 GN=SSRP1 PE=2 SV=1)

HSP 1 Score: 1011.5 bits (2614), Expect = 4.5e-294
Identity = 523/688 (76.02%), Postives = 579/688 (84.16%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTVSSLSLCVDGCLTRFLGVVGSLYFVWEWGCCYAFQTLSFELF 60
           M DG L+NNI+LG RGGT                                          
Sbjct: 1   MTDGHLFNNITLGXRGGT------------------------------------------ 60

Query: 61  LNSNPGQLKTDQRGIQWKKQGGGKAIEVDKADITSVTWMKVPRTNQLGIRVKDGLYYKFI 120
              NPGQ+K    GI WK+QGGGK I+VDK DI  VTWMKVP+TNQLG+++KDGL YKF 
Sbjct: 61  ---NPGQIKIYSGGILWKRQGGGKTIDVDKTDIMGVTWMKVPKTNQLGVQIKDGLLYKFT 120

Query: 121 GFRDQDITSLTKFFQSNCGITPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180
           GFRDQD+ SLT FFQ+  GIT EEKQLSV+GRNWGEVDLNGNML F+VGSKQAFEVSLAD
Sbjct: 121 GFRDQDVVSLTNFFQNTFGITVEEKQLSVTGRNWGEVDLNGNMLAFMVGSKQAFEVSLAD 180

Query: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENCPPAQVFRDKI 240
           V+QT LQGKNDV+LEFHVDDTTGANEKDSLME+SFHIP++NTQFVGDEN P AQVFRDKI
Sbjct: 181 VSQTNLQGKNDVILEFHVDDTTGANEKDSLMEMSFHIPSSNTQFVGDENRPSAQVFRDKI 240

Query: 241 TSMADVGRGIEEAVVTFEGIAILTPRGRYSVELHVSFLRLQGQANDFKIQYSSVVRLFLL 300
            SMADVG G E+AVVTF+GIAILTPRGRYSVELH+SFLRLQGQANDFKIQYSSVVRLFLL
Sbjct: 241 MSMADVGVGGEDAVVTFDGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLL 300

Query: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLHFADEHLYTKYKDKLELS 360
           PKSNQPHTFV+++LDPPIRKGQTLYPHIV+QFETD VV S L  +++   +KYKDKLELS
Sbjct: 301 PKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDTVVDSELAISEDLYNSKYKDKLELS 360

Query: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420
           YKGLIHEVFTT+LRGLSG K+T+PG FRSCQDGYAVKSSLKAEDG+LYPLEKSFFFLPKP
Sbjct: 361 YKGLIHEVFTTVLRGLSGGKVTKPGNFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKP 420

Query: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISVKG 480
           PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLK+EQEHLFRNIQRNEYHNL+ FIS KG
Sbjct: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYGFISSKG 480

Query: 481 LKIMNLGDA-KARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVVDKDDGGS 540
           LKIMN+ DA +A  GVA VL+ DDDDAVDPHLERIRNEAGGDESDEEDSDFV+DKDDGGS
Sbjct: 481 LKIMNIADAQQAVGGVAKVLENDDDDAVDPHLERIRNEAGGDESDEEDSDFVIDKDDGGS 540

Query: 541 PTDDSGGEESDASDSGGEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKKKD 600
           PTDDSG + SDAS SGGE EKP KKE KKD S+  + +KKK ++   DG  KKKQKKKKD
Sbjct: 541 PTDDSGADVSDASQSGGETEKPAKKEPKKDLSSKASSSKKKSKDADVDG-VKKKQKKKKD 600

Query: 601 PNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSVEEKEPYEAKARDD 660
           PNAPKRA+SGFMFFS+MEREN+KK+NPGISFT++GRVLG+KW  +S EEKEPYEAKA+ D
Sbjct: 601 PNAPKRALSGFMFFSQMERENLKKTNPGISFTDVGRVLGEKWKNLSAEEKEPYEAKAQAD 642

Query: 661 KKRYKEEISGYKNPQPMNIDSGNESDSA 688
           KKRYK+EISGYKNPQPMN+DSGNESDSA
Sbjct: 661 KKRYKDEISGYKNPQPMNVDSGNESDSA 642

[Close]

BLAST of Spg013196 vs. ExPASy Swiss-Prot
Match: Q39601 (FACT complex subunit SSRP1 OS=Catharanthus roseus OX=4058 GN=SSRP1 PE=2 SV=1)

HSP 1 Score: 973.0 bits (2514), Expect = 1.8e-282
Identity = 514/687 (74.82%), Postives = 562/687 (81.80%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTVSSLSLCVDGCLTRFLGVVGSLYFVWEWGCCYAFQTLSFELF 60
           MADG L+NNI+LGGRGGT                                          
Sbjct: 1   MADGHLFNNITLGGRGGT------------------------------------------ 60

Query: 61  LNSNPGQLKTDQRGIQWKKQGGGKAIEVDKADITSVTWMKVPRTNQLGIRVKDGLYYKFI 120
              NPGQL+    GI WKKQGG KA+EVDK+D+  +TWMKVPR+NQLG+R+KDGL+YKF 
Sbjct: 61  ---NPGQLRVHSGGILWKKQGGAKAVEVDKSDMVGLTWMKVPRSNQLGVRIKDGLFYKFT 120

Query: 121 GFRDQDITSLTKFFQSNCGITPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180
           GFRDQD+ SLT + QS CGITPEEKQLSVSG+NWGEVDLNGNMLTFLVGSKQAFEVSLAD
Sbjct: 121 GFRDQDVASLTSYLQSTCGITPEEKQLSVSGKNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180

Query: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENCPPAQVFRDKI 240
           VAQTQLQGKNDVMLEF          K+SLMEISFH+PN+NTQFVGDEN PPAQVFRDKI
Sbjct: 181 VAQTQLQGKNDVMLEFMWMILLEQMRKNSLMEISFHVPNSNTQFVGDENRPPAQVFRDKI 240

Query: 241 TSMADVGRGIEEAVVTFEGIAILTPRGRYSVELHVSFLRLQGQANDFKIQYSSVVRLFLL 300
            SMADVG G E+AVVTFEGIAILTPRGRY+VELH+SFLRLQGQANDFKIQYSSVVRLFLL
Sbjct: 241 MSMADVGAGGEDAVVTFEGIAILTPRGRYNVELHLSFLRLQGQANDFKIQYSSVVRLFLL 300

Query: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLHFADEHLYTKYKDKLELS 360
           PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVV S+L  +++ L TKYKDKLE +
Sbjct: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVDSSLSISEDLLSTKYKDKLEPT 360

Query: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420
           YKGLIHEVFT ILRGLSGAK+TRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP
Sbjct: 361 YKGLIHEVFTMILRGLSGAKVTRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420

Query: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISVKG 480
           PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFIS KG
Sbjct: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISSKG 480

Query: 481 LKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVVDKDDGGSP 540
           LKIMNLG  KA D + AVLQEDDDDAVDPHLERI+NEAGGDESDEED DFV D DD GSP
Sbjct: 481 LKIMNLGADKAADAITAVLQEDDDDAVDPHLERIKNEAGGDESDEEDEDFVADIDDEGSP 540

Query: 541 TDDSGGEESDASDSGGEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKKKDP 600
           TDDSG  ESD SDSG E E P KK+ KK+ SA K P  +K + G +D  KKKKQKKKKDP
Sbjct: 541 TDDSGEGESDGSDSGNE-EIPTKKKPKKEASAPKVPLSRK-KVGDDDNMKKKKQKKKKDP 600

Query: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSVEEKEPYEAKARDDK 660
           NAPK +IS FMFFS+ EREN+KK NPGI+FT++G+VLGD+ NK  + +K   + +   DK
Sbjct: 601 NAPK-SISAFMFFSQTERENVKKDNPGIAFTDVGKVLGDRCNKCQLRKKHLLKQRLVADK 639

Query: 661 KRYKEEISGYKNPQPMNIDSGNESDSA 688
           KRY +EIS YKNPQPMN+DSGN+SDSA
Sbjct: 661 KRYTDEISNYKNPQPMNVDSGNDSDSA 639

[Close]

BLAST of Spg013196 vs. ExPASy Swiss-Prot
Match: Q05153 (FACT complex subunit SSRP1 OS=Arabidopsis thaliana OX=3702 GN=SSRP1 PE=1 SV=2)

HSP 1 Score: 957.6 bits (2474), Expect = 7.6e-278
Identity = 506/691 (73.23%), Postives = 570/691 (82.49%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTVSSLSLCVDGCLTRFLGVVGSLYFVWEWGCCYAFQTLSFELF 60
           MADG  +NNISL GRGG                                           
Sbjct: 1   MADGHSFNNISLSGRGG------------------------------------------- 60

Query: 61  LNSNPGQLKTDQRGIQWKKQGGGKAIEVDKADITSVTWMKVPRTNQLGIRVKDGLYYKFI 120
              NPG LK +  GIQWKKQGGGKA+EVD++DI SV+W KV ++NQLG++ KDGLYYKF+
Sbjct: 61  --KNPGLLKINSGGIQWKKQGGGKAVEVDRSDIVSVSWTKVTKSNQLGVKTKDGLYYKFV 120

Query: 121 GFRDQDITSLTKFFQSNCGITPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180
           GFRDQD+ SL+ FFQS+ G TP+EKQLSVSGRNWGEVDL+GN LTFLVGSKQAFEVSLAD
Sbjct: 121 GFRDQDVPSLSSFFQSSYGKTPDEKQLSVSGRNWGEVDLHGNTLTFLVGSKQAFEVSLAD 180

Query: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENCPPAQVFRDKI 240
           V+QTQLQGKNDV LEFHVDDT GANEKDSLMEISFHIPN+NTQFVGDEN PP+QVF D I
Sbjct: 181 VSQTQLQGKNDVTLEFHVDDTAGANEKDSLMEISFHIPNSNTQFVGDENRPPSQVFNDTI 240

Query: 241 TSMADVGRGIEEAVVTFEGIAILTPRGRYSVELHVSFLRLQGQANDFKIQYSSVVRLFLL 300
            +MADV  G+E+AVVTFE IAILTPRGRY+VELH+SFLRLQGQANDFKIQYSSVVRLFLL
Sbjct: 241 VAMADVSPGVEDAVVTFESIAILTPRGRYNVELHLSFLRLQGQANDFKIQYSSVVRLFLL 300

Query: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLHFADEHLYTKYKDKLELS 360
           PKSNQPHTFVV++LDPPIRKGQT+YPHIV+QFETD VV+S L  +DE + TK+KDKLE S
Sbjct: 301 PKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDTVVESELSISDELMNTKFKDKLERS 360

Query: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420
           YKGLIHEVFTT+LR LSGAKIT+PGKFRS QDG+AVKSSLKAEDGVLYPLEK FFFLPKP
Sbjct: 361 YKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAEDGVLYPLEKGFFFLPKP 420

Query: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISVKG 480
           PTLILH+EIDYVEFERHAAGG+NMHYFDLLIRLKT+ EHLFRNIQRNEYHNL+ FIS KG
Sbjct: 421 PTLILHDEIDYVEFERHAAGGANMHYFDLLIRLKTDHEHLFRNIQRNEYHNLYTFISSKG 480

Query: 481 LKIMNLGDAKARDGVAAVL-QEDDDDAVDPHLERIRNEAGGDESDEEDSDFVV-DKDDGG 540
           LKIMNLG A   DGVAAVL   DDDDAVDPHL RIRN+A  DESDEED DFV+ + DDGG
Sbjct: 481 LKIMNLGGAGTADGVAAVLGDNDDDDAVDPHLTRIRNQA-ADESDEEDEDFVMGEDDDGG 540

Query: 541 SPTDDSGGEESDASDSG-GE-KEKPGKKEAKKDPSASKA-PAKKKPREGTEDGSKKKKQK 600
           SPTDDSGG++SDAS+ G GE KEK  KKE KK+ S+SK  P K+K     E  SK+KK K
Sbjct: 541 SPTDDSGGDDSDASEGGVGEIKEKSIKKEPKKEASSSKGLPPKRKTVAADEGSSKRKKPK 600

Query: 601 KKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSVEEKEPYEAK 660
           KKKDPNAPKRA+SGFMFFS+MER+NIKK +PGI+F E+G+VLGDKW +MS ++KEPYEAK
Sbjct: 601 KKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDKEPYEAK 645

Query: 661 ARDDKKRYKEEISGYKNPQPMNIDSGNESDS 687
           A+ DK+RYK+EIS YKNPQPMN+DSGN+SDS
Sbjct: 661 AQVDKQRYKDEISDYKNPQPMNVDSGNDSDS 645

[Close]

BLAST of Spg013196 vs. ExPASy Swiss-Prot
Match: Q9LGR0 (FACT complex subunit SSRP1-A OS=Oryza sativa subsp. japonica OX=39947 GN=SSRP1-A PE=2 SV=1)

HSP 1 Score: 880.9 bits (2275), Expect = 9.1e-255
Identity = 461/691 (66.71%), Postives = 543/691 (78.58%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTVSSLSLCVDGCLTRFLGVVGSLYFVWEWGCCYAFQTLSFELF 60
           M DG L+NNI LGGR G                                           
Sbjct: 1   MTDGHLFNNILLGGRAG------------------------------------------- 60

Query: 61  LNSNPGQLKTDQRGIQWKKQGGGKAIEVDKADITSVTWMKVPRTNQLGIRVKDGLYYKFI 120
             SNPGQ K    G+ WK+QGGGK IE++K+D+TSVTWMKVPR  QLG+R KDGL+YKFI
Sbjct: 61  --SNPGQFKVYSGGLAWKRQGGGKTIEIEKSDLTSVTWMKVPRAYQLGVRTKDGLFYKFI 120

Query: 121 GFRDQDITSLTKFFQSNCGITPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180
           GFR+QD++SLT F Q N G++P+EKQLSVSG+NWG +D+NGNMLTF+VGSKQAFEVSLAD
Sbjct: 121 GFREQDVSSLTNFMQKNMGLSPDEKQLSVSGQNWGGIDINGNMLTFMVGSKQAFEVSLAD 180

Query: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENCPPAQVFRDKI 240
           V+QTQ+QGK DV+LEFHVDDTTG NEKDSLM++SFH+P +NTQF+GDEN   AQV  + I
Sbjct: 181 VSQTQMQGKTDVLLEFHVDDTTGGNEKDSLMDLSFHVPTSNTQFLGDENRTAAQVLWETI 240

Query: 241 TSMADVGRGIEEAVVTFEGIAILTPRGRYSVELHVSFLRLQGQANDFKIQYSSVVRLFLL 300
             +ADV    EEAVVTFEGIAILTPRGRYSVELH+SFLRLQGQANDFKIQYSS+VRLFLL
Sbjct: 241 MGVADVDSS-EEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSIVRLFLL 300

Query: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLHFADEHLYTKYKDKLELS 360
           PKSN PHTFVVVTLDPPIRKGQTLYPHIV+QFET+ VV+  L    E L  KYKD+LE S
Sbjct: 301 PKSNNPHTFVVVTLDPPIRKGQTLYPHIVIQFETEAVVERNLALTKEVLAEKYKDRLEES 360

Query: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420
           YKGLIHEVFT +LRGLSGAK+TRPG FRSCQDGYAVKSSLKAEDG+LYPLEK FFFLPKP
Sbjct: 361 YKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDGLLYPLEKGFFFLPKP 420

Query: 421 PTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISV 480
           PTLILHEEI++VEFERH AGG+++  HYFDLL++LK +QEHLFRNIQR+EYHNLF+FI+ 
Sbjct: 421 PTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRNIQRSEYHNLFNFING 480

Query: 481 KGLKIMNLGDAK-ARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVVDKDDG 540
           K LKIMNLGD + A  GV AVL++ DDDAVDPHLERI+N+AG +ESDEED DFV DKDD 
Sbjct: 481 KHLKIMNLGDGQGATGGVTAVLRDTDDDAVDPHLERIKNQAGDEESDEEDEDFVADKDDS 540

Query: 541 GSPTDDSGGEESDASDSGGEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKK 600
           GSPTDDSGGE+SDAS+SGGEKEK  KKEA    S+SK P K+KP+   E+GS K+K KKK
Sbjct: 541 GSPTDDSGGEDSDASESGGEKEKLSKKEA----SSSKPPVKRKPKGRDEEGSDKRKPKKK 600

Query: 601 KDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSVEEKEPYEAKAR 660
           KDPNAPKRA++ FM+FS  ER N+K +NP +  TE+ + LG+ W KM+ EEK+PY  +++
Sbjct: 601 KDPNAPKRAMTPFMYFSMAERGNMKNNNPDLPTTEIAKKLGEMWQKMTGEEKQPYIQQSQ 641

Query: 661 DDKKRYKEEISGYKNPQPMNIDS---GNESD 686
            DKKRY++E + Y+    M++DS   GNESD
Sbjct: 661 VDKKRYEKESAVYRGAAAMDVDSGSGGNESD 641

[Close]

BLAST of Spg013196 vs. ExPASy Swiss-Prot
Match: Q9LEF5 (FACT complex subunit SSRP1 OS=Zea mays OX=4577 GN=SSRP1 PE=1 SV=1)

HSP 1 Score: 876.3 bits (2263), Expect = 2.2e-253
Identity = 456/689 (66.18%), Postives = 538/689 (78.08%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTVSSLSLCVDGCLTRFLGVVGSLYFVWEWGCCYAFQTLSFELF 60
           M DG  +NNI LGGRGGT                                          
Sbjct: 1   MTDGHHFNNILLGGRGGT------------------------------------------ 60

Query: 61  LNSNPGQLKTDQRGIQWKKQGGGKAIEVDKADITSVTWMKVPRTNQLGIRVKDGLYYKFI 120
              NPGQ K    G+ WK+QGGGK IE+DKAD+T+VTWMKVPR  QLG+R+K GL+Y+FI
Sbjct: 61  ---NPGQFKVHSGGLAWKRQGGGKTIEIDKADVTAVTWMKVPRAYQLGVRIKAGLFYRFI 120

Query: 121 GFRDQDITSLTKFFQSNCGITPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180
           GFR+QD+++LT F Q N G+TP+EKQLSVSG+NWG +D++GNMLTF+VGSKQAFEVSL D
Sbjct: 121 GFREQDVSNLTNFIQKNMGVTPDEKQLSVSGQNWGGIDIDGNMLTFMVGSKQAFEVSLPD 180

Query: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENCPPAQVFRDKI 240
           VAQTQ+QGK DV+LE HVDDTTGANEKDSLM++SFH+P +NTQFVGDE+ PPA +  + I
Sbjct: 181 VAQTQMQGKTDVLLELHVDDTTGANEKDSLMDLSFHVPTSNTQFVGDESRPPAHILWETI 240

Query: 241 TSMADVGRGIEEAVVTFEGIAILTPRGRYSVELHVSFLRLQGQANDFKIQYSSVVRLFLL 300
              ADVG   EE VVTFEGIAILTPRGRYSVELH+SFLRLQGQANDFKIQYSS+VRLFLL
Sbjct: 241 LKFADVGSS-EEPVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSIVRLFLL 300

Query: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLHFADEHLYTKYKDKLELS 360
           PKSN PHTFVV+TLDPPIRKGQTLYPHIV+QFET+ VV+  L  + E L  KYKD+LE S
Sbjct: 301 PKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVERDLALSKELLVEKYKDRLEES 360

Query: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420
           YKGLIHEVFT +LRGLSGAK+TRPG FRSCQDGYAVKSSLKAEDG+LYPLEK FFFLPKP
Sbjct: 361 YKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDGLLYPLEKGFFFLPKP 420

Query: 421 PTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISV 480
           PTLILHEEI++VEFERH AGG+++  HYFDLL++LK +QEHLFRNIQRNEYHNLF+FI+ 
Sbjct: 421 PTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRNIQRNEYHNLFNFING 480

Query: 481 KGLKIMNL-GDAKARDGVAA-VLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVVDKDD 540
           K +KIMNL GD +   GV   VL++ DDDAVDPHLERI+N+AG +ESDEED DFV DKDD
Sbjct: 481 KNIKIMNLGGDGQGASGVVTDVLRDTDDDAVDPHLERIKNQAGDEESDEEDEDFVADKDD 540

Query: 541 GGSPTDDSGGEESDASDSGGEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKK 600
            GSPTDDSG EESDASDSGGEKEK  KKEA    S+SK   K+K +   ++G +KKK KK
Sbjct: 541 SGSPTDDSGDEESDASDSGGEKEKSSKKEA----SSSKPVQKRKHKARDDEGQEKKKPKK 600

Query: 601 KKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSVEEKEPYEAKA 660
           KKDPNAPKRA++ FM+FS  ER N+K SNP +  TE+ + LG+ W KMS EEK+PY  +A
Sbjct: 601 KKDPNAPKRAMTPFMYFSMAERGNMKSSNPDLPTTEIAKKLGEMWQKMSGEEKQPYIQQA 639

Query: 661 RDDKKRYKEEISGYKNPQPMNIDSGNESD 686
           + DKKRY++E + Y+    +++DSGNESD
Sbjct: 661 QVDKKRYEKESAVYRGEATVDVDSGNESD 639

[Close]

BLAST of Spg013196 vs. ExPASy TrEMBL
Match: A0A6J1DKW2 (FACT complex subunit SSRP1 OS=Momordica charantia OX=3673 GN=LOC111021003 PE=3 SV=1)

HSP 1 Score: 1184.9 bits (3064), Expect = 0.0e+00
Identity = 615/687 (89.52%), Postives = 624/687 (90.83%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTVSSLSLCVDGCLTRFLGVVGSLYFVWEWGCCYAFQTLSFELF 60
           MADGQLYNNISLGGRGGT                                          
Sbjct: 1   MADGQLYNNISLGGRGGT------------------------------------------ 60

Query: 61  LNSNPGQLKTDQRGIQWKKQGGGKAIEVDKADITSVTWMKVPRTNQLGIRVKDGLYYKFI 120
              NPGQLKTDQRGIQWKKQGGGKAIEVDK+DI SVTWMKVPRTNQLGIRVKDGLYYKFI
Sbjct: 61  ---NPGQLKTDQRGIQWKKQGGGKAIEVDKSDIVSVTWMKVPRTNQLGIRVKDGLYYKFI 120

Query: 121 GFRDQDITSLTKFFQSNCGITPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180
           GFRDQDITSLTKFFQSNCGI PEEKQ+SVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD
Sbjct: 121 GFRDQDITSLTKFFQSNCGIVPEEKQISVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180

Query: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENCPPAQVFRDKI 240
           VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPN+NTQFVGDENCPPAQVFRDKI
Sbjct: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENCPPAQVFRDKI 240

Query: 241 TSMADVGRGIEEAVVTFEGIAILTPRGRYSVELHVSFLRLQGQANDFKIQYSSVVRLFLL 300
            SMADV  GIEEAVVTFEGIAILTPRGRYSVELH+SFLRLQGQANDFKIQYSSVVRLFLL
Sbjct: 241 MSMADVNAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLL 300

Query: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLHFADEHLYTKYKDKLELS 360
           PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTL   DE   TKYKDKLE S
Sbjct: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIGDELFNTKYKDKLEPS 360

Query: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420
           YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP
Sbjct: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420

Query: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISVKG 480
           PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFIS KG
Sbjct: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKG 480

Query: 481 LKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVVDKDDGGSP 540
           LKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEED DFV+DKDDGGSP
Sbjct: 481 LKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDEDFVLDKDDGGSP 540

Query: 541 TDDSGGEESDASDSGGEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKKKDP 600
           TDDSGG++SDAS+SGGEKEKPGKKE KKDPSASKAPAKKK R+G EDGSKKKKQKKKKDP
Sbjct: 541 TDDSGGDDSDASESGGEKEKPGKKETKKDPSASKAPAKKKSRDGAEDGSKKKKQKKKKDP 600

Query: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSVEEKEPYEAKARDDK 660
           NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS EEKEPYEAKARDDK
Sbjct: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYEAKARDDK 642

Query: 661 KRYKEEISGYKNPQPMNIDSGNESDSA 688
           KRYKEEISGYKNPQPMNIDSGNESDSA
Sbjct: 661 KRYKEEISGYKNPQPMNIDSGNESDSA 642

[Close]

BLAST of Spg013196 vs. ExPASy TrEMBL
Match: A0A0A0LG27 (FACT complex subunit SSRP1 OS=Cucumis sativus OX=3659 GN=Csa_3G827340 PE=3 SV=1)

HSP 1 Score: 1174.1 bits (3036), Expect = 0.0e+00
Identity = 612/687 (89.08%), Postives = 621/687 (90.39%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTVSSLSLCVDGCLTRFLGVVGSLYFVWEWGCCYAFQTLSFELF 60
           MADGQLYNNISLGGRGGT                                          
Sbjct: 1   MADGQLYNNISLGGRGGT------------------------------------------ 60

Query: 61  LNSNPGQLKTDQRGIQWKKQGGGKAIEVDKADITSVTWMKVPRTNQLGIRVKDGLYYKFI 120
              NPGQLKTDQRGIQWKKQGGGKAIEVDKADI  VTWMKVPR+NQLGIRVKDGLYYKFI
Sbjct: 61  ---NPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSNQLGIRVKDGLYYKFI 120

Query: 121 GFRDQDITSLTKFFQSNCGITPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180
           GFRDQDI+SLTKFFQSNCGI PEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD
Sbjct: 121 GFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180

Query: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENCPPAQVFRDKI 240
           VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDE+ PPAQVFRDKI
Sbjct: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDESRPPAQVFRDKI 240

Query: 241 TSMADVGRGIEEAVVTFEGIAILTPRGRYSVELHVSFLRLQGQANDFKIQYSSVVRLFLL 300
            SMADV  GIEEAVVTFEGIAILTPRGRYSVELH+SFLRLQGQANDFKIQYSSVVRLFLL
Sbjct: 241 MSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLL 300

Query: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLHFADEHLYTKYKDKLELS 360
           PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTL   DE   TKYKDKLE S
Sbjct: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIGDELFNTKYKDKLEPS 360

Query: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420
           YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP
Sbjct: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420

Query: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISVKG 480
           PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFIS KG
Sbjct: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKG 480

Query: 481 LKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVVDKDDGGSP 540
           LKIMNLGDA+ARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFV DKDDGGSP
Sbjct: 481 LKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVADKDDGGSP 540

Query: 541 TDDSGGEESDASDSGGEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKKKDP 600
           TDDSGG++SD S SGGEKEKPGKKEAKKDPSASKAPAKKK REG +DGSKKKKQKKKKDP
Sbjct: 541 TDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGADDGSKKKKQKKKKDP 600

Query: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSVEEKEPYEAKARDDK 660
           NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS EEKEPYE+KARDDK
Sbjct: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYESKARDDK 642

Query: 661 KRYKEEISGYKNPQPMNIDSGNESDSA 688
           KRYKEEISGYKNPQPMNIDSGNESDSA
Sbjct: 661 KRYKEEISGYKNPQPMNIDSGNESDSA 642

[Close]

BLAST of Spg013196 vs. ExPASy TrEMBL
Match: A0A1S3B828 (FACT complex subunit SSRP1 OS=Cucumis melo OX=3656 GN=LOC103487021 PE=3 SV=1)

HSP 1 Score: 1171.4 bits (3029), Expect = 0.0e+00
Identity = 611/687 (88.94%), Postives = 621/687 (90.39%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTVSSLSLCVDGCLTRFLGVVGSLYFVWEWGCCYAFQTLSFELF 60
           MADGQLYNNISLGGRGGT                                          
Sbjct: 1   MADGQLYNNISLGGRGGT------------------------------------------ 60

Query: 61  LNSNPGQLKTDQRGIQWKKQGGGKAIEVDKADITSVTWMKVPRTNQLGIRVKDGLYYKFI 120
              NPGQLKTDQRGIQWKKQGGGKAIEVDKADI  VTWMKVPR+NQLGIRVKDGLYYKFI
Sbjct: 61  ---NPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSNQLGIRVKDGLYYKFI 120

Query: 121 GFRDQDITSLTKFFQSNCGITPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180
           GFRDQDI+SLTK+FQSNCGI PEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD
Sbjct: 121 GFRDQDISSLTKYFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180

Query: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENCPPAQVFRDKI 240
           VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDE+ PPAQVFRDKI
Sbjct: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDESRPPAQVFRDKI 240

Query: 241 TSMADVGRGIEEAVVTFEGIAILTPRGRYSVELHVSFLRLQGQANDFKIQYSSVVRLFLL 300
            SMADV  GIEEAVVTFEGIAILTPRGRYSVELH+SFLRLQGQANDFKIQYSSVVRLFLL
Sbjct: 241 MSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLL 300

Query: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLHFADEHLYTKYKDKLELS 360
           PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTL   DE L TKYKDKLE S
Sbjct: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIGDELLNTKYKDKLEPS 360

Query: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420
           YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP
Sbjct: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420

Query: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISVKG 480
           PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFIS KG
Sbjct: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKG 480

Query: 481 LKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVVDKDDGGSP 540
           LKIMNLGDA+ARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFV DKDDGGSP
Sbjct: 481 LKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVADKDDGGSP 540

Query: 541 TDDSGGEESDASDSGGEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKKKDP 600
           TDDSGG++SD S SGGEKEKPGKKEAKKDPSASKAPAKKK REG +DGSKKKKQKKKKDP
Sbjct: 541 TDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGADDGSKKKKQKKKKDP 600

Query: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSVEEKEPYEAKARDDK 660
           NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS EEKEPYE+KARDDK
Sbjct: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYESKARDDK 642

Query: 661 KRYKEEISGYKNPQPMNIDSGNESDSA 688
           KRYKEEISGYKN QPMNIDSGNESDSA
Sbjct: 661 KRYKEEISGYKNTQPMNIDSGNESDSA 642

[Close]

BLAST of Spg013196 vs. ExPASy TrEMBL
Match: A0A6J1I3D5 (FACT complex subunit SSRP1 OS=Cucurbita maxima OX=3661 GN=LOC111469559 PE=3 SV=1)

HSP 1 Score: 1168.7 bits (3022), Expect = 0.0e+00
Identity = 609/687 (88.65%), Postives = 620/687 (90.25%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTVSSLSLCVDGCLTRFLGVVGSLYFVWEWGCCYAFQTLSFELF 60
           MADGQLYNNISLGGRGGT                                          
Sbjct: 1   MADGQLYNNISLGGRGGT------------------------------------------ 60

Query: 61  LNSNPGQLKTDQRGIQWKKQGGGKAIEVDKADITSVTWMKVPRTNQLGIRVKDGLYYKFI 120
              NPGQLKTDQRGIQWKKQGGGKA+EVDK DI  VTWMKVPRTNQLGIRVKDGLYYKFI
Sbjct: 61  ---NPGQLKTDQRGIQWKKQGGGKAVEVDKEDIVGVTWMKVPRTNQLGIRVKDGLYYKFI 120

Query: 121 GFRDQDITSLTKFFQSNCGITPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180
           GFRDQDI SLTKFFQSNCGI PEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD
Sbjct: 121 GFRDQDINSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180

Query: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENCPPAQVFRDKI 240
           VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDEN PPAQVFRDKI
Sbjct: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENHPPAQVFRDKI 240

Query: 241 TSMADVGRGIEEAVVTFEGIAILTPRGRYSVELHVSFLRLQGQANDFKIQYSSVVRLFLL 300
            SMADV  GIEEAVVTFEGIAILTPRGRYSVELH+SFLRLQGQANDFKIQYSSVVRLFLL
Sbjct: 241 MSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLL 300

Query: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLHFADEHLYTKYKDKLELS 360
           PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTL   DE L+TK+KDKLE S
Sbjct: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIGDELLHTKFKDKLEPS 360

Query: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420
           YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP
Sbjct: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420

Query: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISVKG 480
           PTL+LH+EIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFIS KG
Sbjct: 421 PTLLLHDEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKG 480

Query: 481 LKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVVDKDDGGSP 540
           LKIMNLGDA+ARDGVAAVLQ DDDDAVDPHLERIRNEAGGDESDEEDSDFVV+KDDGGSP
Sbjct: 481 LKIMNLGDAQARDGVAAVLQADDDDAVDPHLERIRNEAGGDESDEEDSDFVVEKDDGGSP 540

Query: 541 TDDSGGEESDASDSGGEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKKKDP 600
           TDDSGGE+SDAS SGGEKEKPGKKEAKKD SASK PAKKKPREGT+DGSKKKK KKKKDP
Sbjct: 541 TDDSGGEDSDASVSGGEKEKPGKKEAKKDHSASKPPAKKKPREGTDDGSKKKKPKKKKDP 600

Query: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSVEEKEPYEAKARDDK 660
           NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS EEKEPYE+KARDDK
Sbjct: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYESKARDDK 642

Query: 661 KRYKEEISGYKNPQPMNIDSGNESDSA 688
            RYKEEISGYKNPQPMNIDSGNESDSA
Sbjct: 661 IRYKEEISGYKNPQPMNIDSGNESDSA 642

[Close]

BLAST of Spg013196 vs. ExPASy TrEMBL
Match: A0A6J1EKE3 (FACT complex subunit SSRP1 OS=Cucurbita moschata OX=3662 GN=LOC111435463 PE=3 SV=1)

HSP 1 Score: 1165.2 bits (3013), Expect = 0.0e+00
Identity = 607/686 (88.48%), Postives = 619/686 (90.23%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTVSSLSLCVDGCLTRFLGVVGSLYFVWEWGCCYAFQTLSFELF 60
           MADGQLYNNISLGGRGGT                                          
Sbjct: 1   MADGQLYNNISLGGRGGT------------------------------------------ 60

Query: 61  LNSNPGQLKTDQRGIQWKKQGGGKAIEVDKADITSVTWMKVPRTNQLGIRVKDGLYYKFI 120
              NPGQLKTDQRGIQWKKQGGGKA+E+DK DI  VTWMKVPRTNQLGIRVKDGLYYKFI
Sbjct: 61  ---NPGQLKTDQRGIQWKKQGGGKAVELDKEDIIGVTWMKVPRTNQLGIRVKDGLYYKFI 120

Query: 121 GFRDQDITSLTKFFQSNCGITPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180
           GFRDQDITSLTKFFQSNCGI PEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD
Sbjct: 121 GFRDQDITSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180

Query: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENCPPAQVFRDKI 240
           VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDEN PPAQVFRDKI
Sbjct: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENHPPAQVFRDKI 240

Query: 241 TSMADVGRGIEEAVVTFEGIAILTPRGRYSVELHVSFLRLQGQANDFKIQYSSVVRLFLL 300
            SMADV  GIEEAVVTFEGIAILTPRGRYSVELH+SFLRLQGQANDFKIQYSSVVRLFLL
Sbjct: 241 MSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLL 300

Query: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLHFADEHLYTKYKDKLELS 360
           PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTL   DE L+TK+KDKLE S
Sbjct: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIGDELLHTKFKDKLEPS 360

Query: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420
           YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP
Sbjct: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420

Query: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISVKG 480
           PTL+LH+EIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFIS KG
Sbjct: 421 PTLLLHDEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKG 480

Query: 481 LKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVVDKDDGGSP 540
           LKIMNLGDA+ARDGVAAVLQ DDDDAVDPHLERIRNEAGGDESDEEDSDFVV+KDDGGSP
Sbjct: 481 LKIMNLGDAQARDGVAAVLQADDDDAVDPHLERIRNEAGGDESDEEDSDFVVEKDDGGSP 540

Query: 541 TDDSGGEESDASDSGGEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKKKDP 600
           TDDSGGE+SDAS SGGEKEKPGKKEAKKD SASK PAKKKPREGT+DGSKKKK KKKKDP
Sbjct: 541 TDDSGGEDSDASVSGGEKEKPGKKEAKKDHSASKPPAKKKPREGTDDGSKKKKPKKKKDP 600

Query: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSVEEKEPYEAKARDDK 660
           NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS EEKEPYE+KARDDK
Sbjct: 601 NAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYESKARDDK 641

Query: 661 KRYKEEISGYKNPQPMNIDSGNESDS 687
            RYKEEISGYKNPQP NIDSGNESDS
Sbjct: 661 IRYKEEISGYKNPQPTNIDSGNESDS 641

[Close]

BLAST of Spg013196 vs. TAIR 10
Match: AT3G28730.1 (high mobility group )

HSP 1 Score: 957.6 bits (2474), Expect = 5.4e-279
Identity = 506/691 (73.23%), Postives = 570/691 (82.49%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTVSSLSLCVDGCLTRFLGVVGSLYFVWEWGCCYAFQTLSFELF 60
           MADG  +NNISL GRGG                                           
Sbjct: 1   MADGHSFNNISLSGRGG------------------------------------------- 60

Query: 61  LNSNPGQLKTDQRGIQWKKQGGGKAIEVDKADITSVTWMKVPRTNQLGIRVKDGLYYKFI 120
              NPG LK +  GIQWKKQGGGKA+EVD++DI SV+W KV ++NQLG++ KDGLYYKF+
Sbjct: 61  --KNPGLLKINSGGIQWKKQGGGKAVEVDRSDIVSVSWTKVTKSNQLGVKTKDGLYYKFV 120

Query: 121 GFRDQDITSLTKFFQSNCGITPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLAD 180
           GFRDQD+ SL+ FFQS+ G TP+EKQLSVSGRNWGEVDL+GN LTFLVGSKQAFEVSLAD
Sbjct: 121 GFRDQDVPSLSSFFQSSYGKTPDEKQLSVSGRNWGEVDLHGNTLTFLVGSKQAFEVSLAD 180

Query: 181 VAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDENCPPAQVFRDKI 240
           V+QTQLQGKNDV LEFHVDDT GANEKDSLMEISFHIPN+NTQFVGDEN PP+QVF D I
Sbjct: 181 VSQTQLQGKNDVTLEFHVDDTAGANEKDSLMEISFHIPNSNTQFVGDENRPPSQVFNDTI 240

Query: 241 TSMADVGRGIEEAVVTFEGIAILTPRGRYSVELHVSFLRLQGQANDFKIQYSSVVRLFLL 300
            +MADV  G+E+AVVTFE IAILTPRGRY+VELH+SFLRLQGQANDFKIQYSSVVRLFLL
Sbjct: 241 VAMADVSPGVEDAVVTFESIAILTPRGRYNVELHLSFLRLQGQANDFKIQYSSVVRLFLL 300

Query: 301 PKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLHFADEHLYTKYKDKLELS 360
           PKSNQPHTFVV++LDPPIRKGQT+YPHIV+QFETD VV+S L  +DE + TK+KDKLE S
Sbjct: 301 PKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDTVVESELSISDELMNTKFKDKLERS 360

Query: 361 YKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 420
           YKGLIHEVFTT+LR LSGAKIT+PGKFRS QDG+AVKSSLKAEDGVLYPLEK FFFLPKP
Sbjct: 361 YKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAEDGVLYPLEKGFFFLPKP 420

Query: 421 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISVKG 480
           PTLILH+EIDYVEFERHAAGG+NMHYFDLLIRLKT+ EHLFRNIQRNEYHNL+ FIS KG
Sbjct: 421 PTLILHDEIDYVEFERHAAGGANMHYFDLLIRLKTDHEHLFRNIQRNEYHNLYTFISSKG 480

Query: 481 LKIMNLGDAKARDGVAAVL-QEDDDDAVDPHLERIRNEAGGDESDEEDSDFVV-DKDDGG 540
           LKIMNLG A   DGVAAVL   DDDDAVDPHL RIRN+A  DESDEED DFV+ + DDGG
Sbjct: 481 LKIMNLGGAGTADGVAAVLGDNDDDDAVDPHLTRIRNQA-ADESDEEDEDFVMGEDDDGG 540

Query: 541 SPTDDSGGEESDASDSG-GE-KEKPGKKEAKKDPSASKA-PAKKKPREGTEDGSKKKKQK 600
           SPTDDSGG++SDAS+ G GE KEK  KKE KK+ S+SK  P K+K     E  SK+KK K
Sbjct: 541 SPTDDSGGDDSDASEGGVGEIKEKSIKKEPKKEASSSKGLPPKRKTVAADEGSSKRKKPK 600

Query: 601 KKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSVEEKEPYEAK 660
           KKKDPNAPKRA+SGFMFFS+MER+NIKK +PGI+F E+G+VLGDKW +MS ++KEPYEAK
Sbjct: 601 KKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDKEPYEAK 645

Query: 661 ARDDKKRYKEEISGYKNPQPMNIDSGNESDS 687
           A+ DK+RYK+EIS YKNPQPMN+DSGN+SDS
Sbjct: 661 AQVDKQRYKDEISDYKNPQPMNVDSGNDSDS 645

[Close]

BLAST of Spg013196 vs. TAIR 10
Match: AT3G51880.1 (high mobility group B1 )

HSP 1 Score: 57.4 bits (137), Expect = 5.3e-08
Identity = 46/129 (35.66%), Postives = 66/129 (51.16%), Query Frame = 0


Query: 556 GEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKKKDPNAPKRAISGFMFFSK 615
           G+ +    KEA K     K   +K P E       +K++K KKDPN PKRA S F  F +
Sbjct: 6   GKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLE 65

Query: 616 MERENIKKSNPGI-SFTELGRVLGDKWNKMSVEEKEPYEAKARDDKKRYKEEISGYKNPQ 675
             R   KK NP + + + +G+  G KW  MS  EK PYE KA   K  Y++++  Y    
Sbjct: 66  DFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNK-- 125

Query: 676 PMNIDSGNE 684
             N++ G++
Sbjct: 126 --NLEEGSD 130

[Close]

BLAST of Spg013196 vs. TAIR 10
Match: AT3G51880.2 (high mobility group B1 )

HSP 1 Score: 57.4 bits (137), Expect = 5.3e-08
Identity = 46/129 (35.66%), Postives = 66/129 (51.16%), Query Frame = 0


Query: 556 GEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKKKDPNAPKRAISGFMFFSK 615
           G+ +    KEA K     K   +K P E       +K++K KKDPN PKRA S F  F +
Sbjct: 6   GKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLE 65

Query: 616 MERENIKKSNPGI-SFTELGRVLGDKWNKMSVEEKEPYEAKARDDKKRYKEEISGYKNPQ 675
             R   KK NP + + + +G+  G KW  MS  EK PYE KA   K  Y++++  Y    
Sbjct: 66  DFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNK-- 125

Query: 676 PMNIDSGNE 684
             N++ G++
Sbjct: 126 --NLEEGSD 130

[Close]

BLAST of Spg013196 vs. TAIR 10
Match: AT3G51880.3 (high mobility group B1 )

HSP 1 Score: 57.4 bits (137), Expect = 5.3e-08
Identity = 46/129 (35.66%), Postives = 66/129 (51.16%), Query Frame = 0


Query: 556 GEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKKKDPNAPKRAISGFMFFSK 615
           G+ +    KEA K     K   +K P E       +K++K KKDPN PKRA S F  F +
Sbjct: 6   GKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLE 65

Query: 616 MERENIKKSNPGI-SFTELGRVLGDKWNKMSVEEKEPYEAKARDDKKRYKEEISGYKNPQ 675
             R   KK NP + + + +G+  G KW  MS  EK PYE KA   K  Y++++  Y    
Sbjct: 66  DFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNK-- 125

Query: 676 PMNIDSGNE 684
             N++ G++
Sbjct: 126 --NLEEGSD 130

[Close]

BLAST of Spg013196 vs. TAIR 10
Match: AT3G51880.4 (high mobility group B1 )

HSP 1 Score: 57.4 bits (137), Expect = 5.3e-08
Identity = 46/129 (35.66%), Postives = 66/129 (51.16%), Query Frame = 0


Query: 556 GEKEKPGKKEAKKDPSASKAPAKKKPREGTEDGSKKKKQKKKKDPNAPKRAISGFMFFSK 615
           G+ +    KEA K     K   +K P E       +K++K KKDPN PKRA S F  F +
Sbjct: 6   GKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLE 65

Query: 616 MERENIKKSNPGI-SFTELGRVLGDKWNKMSVEEKEPYEAKARDDKKRYKEEISGYKNPQ 675
             R   KK NP + + + +G+  G KW  MS  EK PYE KA   K  Y++++  Y    
Sbjct: 66  DFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNK-- 125

Query: 676 PMNIDSGNE 684
             N++ G++
Sbjct: 126 --NLEEGSD 130

The following BLAST results are available for this feature:

BLAST of Spg013196 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153521.1	0.0e+00	89.52	FACT complex subunit SSRP1 [Momordica charantia]	[more]
XP_004147459.1	0.0e+00	89.08	FACT complex subunit SSRP1 [Cucumis sativus] >KGN59592.1 hypothetical protein Cs...	[more]
XP_038905836.1	0.0e+00	88.94	FACT complex subunit SSRP1 [Benincasa hispida]	[more]
XP_008443431.1	0.0e+00	88.94	PREDICTED: FACT complex subunit SSRP1 [Cucumis melo]	[more]
XP_023531857.1	0.0e+00	88.65	FACT complex subunit SSRP1 [Cucurbita pepo subsp. pepo] >KAG6588385.1 FACT compl...	[more]

BLAST of Spg013196 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04235	4.5e-294	76.02	FACT complex subunit SSRP1 OS=Vicia faba OX=3906 GN=SSRP1 PE=2 SV=1	[more]
Q39601	1.8e-282	74.82	FACT complex subunit SSRP1 OS=Catharanthus roseus OX=4058 GN=SSRP1 PE=2 SV=1	[more]
Q05153	7.6e-278	73.23	FACT complex subunit SSRP1 OS=Arabidopsis thaliana OX=3702 GN=SSRP1 PE=1 SV=2	[more]
Q9LGR0	9.1e-255	66.71	FACT complex subunit SSRP1-A OS=Oryza sativa subsp. japonica OX=39947 GN=SSRP1-A...	[more]
Q9LEF5	2.2e-253	66.18	FACT complex subunit SSRP1 OS=Zea mays OX=4577 GN=SSRP1 PE=1 SV=1	[more]

BLAST of Spg013196 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKW2	0.0e+00	89.52	FACT complex subunit SSRP1 OS=Momordica charantia OX=3673 GN=LOC111021003 PE=3 S...	[more]
A0A0A0LG27	0.0e+00	89.08	FACT complex subunit SSRP1 OS=Cucumis sativus OX=3659 GN=Csa_3G827340 PE=3 SV=1	[more]
A0A1S3B828	0.0e+00	88.94	FACT complex subunit SSRP1 OS=Cucumis melo OX=3656 GN=LOC103487021 PE=3 SV=1	[more]
A0A6J1I3D5	0.0e+00	88.65	FACT complex subunit SSRP1 OS=Cucurbita maxima OX=3661 GN=LOC111469559 PE=3 SV=1	[more]
A0A6J1EKE3	0.0e+00	88.48	FACT complex subunit SSRP1 OS=Cucurbita moschata OX=3662 GN=LOC111435463 PE=3 SV...	[more]

BLAST of Spg013196 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G28730.1	5.4e-279	73.23	high mobility group	[more]
AT3G51880.1	5.3e-08	35.66	high mobility group B1	[more]
AT3G51880.2	5.3e-08	35.66	high mobility group B1	[more]
AT3G51880.3	5.3e-08	35.66	high mobility group B1	[more]
AT3G51880.4	5.3e-08	35.66	high mobility group B1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000969	Structure-specific recognition protein	PRINTS	PR00887	SSRCOGNITION	coord: 286..302 score: 73.53 coord: 374..387 score: 60.71 coord: 309..325 score: 72.06 coord: 401..419 score: 67.76 coord: 461..479 score: 59.87 coord: 264..280 score: 62.5 coord: 419..436 score: 67.36 coord: 445..461 score: 56.62
IPR013719	Domain of unknown function DUF1747	SMART	SM01287	Rtt106_2	coord: 393..486 e-value: 2.9E-34 score: 129.8
IPR013719	Domain of unknown function DUF1747	PFAM	PF08512	Rtt106	coord: 395..484 e-value: 1.2E-19 score: 70.4
IPR009071	High mobility group box domain	SMART	SM00398	hmgende2	coord: 602..672 e-value: 5.2E-28 score: 109.0
IPR009071	High mobility group box domain	PFAM	PF00505	HMG_box	coord: 603..671 e-value: 1.0E-21 score: 77.1
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 603..671 score: 19.896122
IPR038167	SSRP1 domain superfamily	GENE3D	2.30.29.220		coord: 141..224 e-value: 4.3E-25 score: 89.3
IPR024954	SSRP1 domain	PFAM	PF03531	SSrecog	coord: 151..220 e-value: 4.8E-25 score: 87.3
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 50..138 e-value: 4.4E-18 score: 67.4
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 384..493 e-value: 8.0E-34 score: 117.9
None	No IPR available	GENE3D	2.30.29.150		coord: 244..383 e-value: 1.1E-54 score: 185.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 551..593
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 642..668
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 642..687
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 673..687
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 515..611
None	No IPR available	PANTHER	PTHR45849	FACT COMPLEX SUBUNIT SSRP1	coord: 52..685
None	No IPR available	PANTHER	PTHR45849:SF2	FACT COMPLEX SUBUNIT SSRP1-B	coord: 52..685
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 603..668 e-value: 1.84004E-26 score: 100.78
None	No IPR available	CDD	cd13231	PH2_SSRP1-like	coord: 387..486 e-value: 2.08303E-44 score: 152.26
None	No IPR available	CDD	cd13230	PH1_SSRP1-like	coord: 252..385 e-value: 3.00962E-65 score: 209.693
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 251..485
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 587..681 e-value: 3.2E-29 score: 103.2
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 589..672
IPR035417	FACT complex subunit POB3-like, N-terminal PH domain	PFAM	PF17292	POB3_N	coord: 62..143 e-value: 1.3E-20 score: 73.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg013196.1	Spg013196.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
biological_process	GO:0010197	polar nucleus fusion
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
cellular_component	GO:0000791	euchromatin
cellular_component	GO:0035101	FACT complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0042393	histone binding
molecular_function	GO:0031491	nucleosome binding