Spg013169 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACTCTCGACCAAGAGGTCAGAGGTTCGAATCCCCCACCCCCTAATGTTGTTGTACTAAAAAAAAAGCTAATGGATAGTGGTCGGCGATGAAATAATCTTGAAAAGGCTATCAACAAAAATAAGTCAAGCATATGTACAATTTCAAGAACTAAACAAAAGTCATCATGAAGTTTCAACATGAAAATCTAATGAAGCTCTTGGGATGATGTGTTGAAAGACTTGAGATGATGTGTTGAAAGAGTCTATGAATACATGAAAAATAAGTAAAGTTTCTCATTGATTTTCATAGAGGAAGATTATGTAGAGGGAGGAAGGAAAAAAAAAAAAAAACAAACCCCATAGTTCGAGGGTACTTTTTATAATTTTCATTTTCTTTCTTTCTTTTTTTGAAAAAAAAATTCACTCCTTGGCTCAAGTTGGTCTCTTTTTAGTTATTTAAGGTCTCTATTTGGCTAAATACTAGTCCTTTAACACGTGCCGAGGATTAAAATGTGGATAATAAAATGCGATGGACATTTAAAATATTCCAAACCAACAATTTTAAAAATATATTTAAATTAATAAATAAATATTTTACATTTCAAAAATATTTTTAAATACTCATTATTAATATAATTTCCATATTAGTTGCATTTCATTACTTTTTTGTTTACTAGTACAAAAAAACGTGCATCGCACGTGAAATTTTAATAGTTTATTTTAAAGTATAAAATAAAGTACAATGAATTTTTATATTAATGAATAAAAGACAAATTGATTTTATGAAAATAACTATATTGGTACTAAATAAATATTATTTAATAAAGTACAATCCATCCGTTGTTTTAATCTTGCTCTTCTGGCGAAACAAGGGTGGAGGATTCTCAAATGCCCAGATAGCTTATTATCAAGGATATATAAGGATCGTTATTTCAAGCACACTGATTTTTTAGGGGCGACGGCTAAGGGGCGAGTTTCATGGGGTTGGCGAAGTATCATAGATGGGAGAGATGTTCTTCGACAAGGGTTTTGTTGGCGGGTAGGCATGGAGACGAAATTAAAGATCTGGGAAGATCCTTGGGTACCAAGGCCCTCAACGTTTAAACCACTGCGATGTTTGAATAATGAGTGGAGCTTGGTTAAAGATTTGTTGGAAGAGAATGGGTCAAAATGGAGGGGAGATCGTTTGAGAAGTTCATTATCGCCTGAGGATGTGGAGTTGGTTATGGCTATTCCGATCAGCAGAAGAGAGGCTACCGATCGAGCAGTATGGCACTTTACAAACTCCGGGGAGTATACTGTTAAATCGGGCTATCGCACGGCAAAGAATCTGCTGTCCAATGCGGAATCAAGCGCTAATGGGGGTAGACGCCTCCTATGGAAGAAGATATGGAATTTGCCTTGTATTCCAAAGATAAGAAACTTTATTTGGAGGGCCTCTAAAAATTTTCTTGCAGTAGGTGGGAACCTGGTCCGAAGGGGTATGCAGACGGATGGATTTTGCCAAATTTGTGGGGGAGAATTAGAGACAGTAAACCATGCCCTTCTGGAGTGTGAGCCGGCCAGGGCCTTTTGGTTTGGTTCACCACTACAGTTGGACACAAGGGGATATAAGGGGTTGAGTTTTGCTGTGAGTTGGGAGAAAATATATCTAAGAATGGAAGGGAAGGATAATTCGGATGAGGCCCTCTGTTACCTAGGACATGGGTTGTGGAGGGTTTGGAAGGAAAGGAATGCGGTGATTTTCAAAAACAAGGCTCCGGAAATTGAGAATAACATTGTATTCACCATCAGAGATGTTAGTGAATACAGAAAAGCTGTGGGAGAGGCAGCAATTGGTAGGCGAGAAGAGCCGGGTAGTGAGGATCAGCAGGTGGGTCGAAATCCAGATCGGCCGACTTTGTGGATAGATGCTGCATGGATAAAGGAGACTTTATCGTCTGGACTGGGCTGGTCATTGCGAGGCCCTGATGGAAGCATTTGGCTAGAACAAGCAGAAAATGGTGGGAACAGTTTGAACAGCATGCATGCAGAGGGAAAAGCATTAGTCCGTGGCTTGGAATGCGCGAAGACGATGGGCATTCAAGAGCTGCTTGTTAAGTCTGATGCTTTACGAGTGGTGAACATCATGAATGGGAAGGAAAAATGCCCAGTGGACTTTGAACCAATACATGACTGCTTTTGTCATCTACTTGAGGATTTTAATTCTTGCGAATTGTTATTTGTCAAGAGGGAGCTCAATGAGAGAACTCATATGTTAGCCAAGAATGGCCTTTGTAACTAGTTATTTCTTCGAATAAAGCTTTCGTTTGGAACAAAAAAAAATAACTTGGTAATAAAAAAAAAAAAAAAAGCAATTATACACATAACTAACGTAACAGTATAACTATTATTGTTATAAACTAACACAAGCATAGATCAATGATAATTGACATCTACTCATTCCCTCAAAATTAGAGTTTCAGAACTTCATACCTGCACATTTGTAATGTTAAAAAAACCTATATAATTAAATTGTAGTGTATTTATTAAAAAACTGATGTTTAATATAAGAAACATAGTATGCATTTAAAATTAAATCTAAAAGATGTAAAATGTATATTTATATATGAAATGGAAGTTAAGACAACACATTTAATTTAATTTAATTTTTGAAAATTAAATTGCAACATCGACCCATAAATATAACTTTATACAAATGTTTACCTTATATTTTTATTACTAAACCATATTATTTTTAGTAATAATTATTCTACATTTCAACTCATTAAAAATAAAAAGTGAATTAATATGACATATTATCAGTCCAATTTGTATGATTCAAAATAAAAATAGAAAGTGAATTAATAAGAAGTATTGTCACTCCAATTTGTATGATTCAAAATAGCTATCTTTTTTTGGAATTACACCAACATTTTATAAGAATGCATGAAAGTAAAATTTAGCCCAATATGTTTTATTCAATTGAATTTATAAAATAAAATGAAAAAAAAAATCACTTGAACTTGAACCAAATATTGTTCTAAGAATATGTGAAATTCAATCTTTCTAACTCATATATAATCGAATATTTAAAATGAAAGGGCAAAAATGTCACACACTTGACTCTCTATTGCCTTTTATGGATACACAATACTTGTTTAAAAATCAATTCATTGGATTTGATGTTTATATCAACTAATGATCACCACAATTGTCTTCCATTGTTTTATTTTCTTTTGGAATTTAAATCAATATAGTATATTTTATTTCCTTTTTAAAATTGAATCAATGAAGAAAATTTTATTTATCACCTTTCGAAAATACTAAAAATATATTAGAAATTTGGAGAGTCAGAGAAGATATAACAATAAAGAGAGATTACTTTAACAAAAATATAGTTTGTCATACTAAAAAAAAATAATAATAATATAATGTAGAAATTTGCAACCTCTTCCAATTCCCTAAAATCGAGCTAGCAATAGCATTTTCGAATATAGATATACTATGGCTTATTGTTGAGAGCAAGAAGGAGAGAAGCAATATTTATGTATAGAGGGGAAAAACAAGAAAAGAAAAGATGAAAGAGCGAGAGAGGGAAGAGTGTGAATAGATGTTGGGGAAGCCAATGGTCCAAAAAAACTCGAAGGTTTTCTTAATTTACTTCTTCTCCAACCGAAAAACTTCTCCACGTCATAAATGATAAAACCTATTTATTTGAAATTGATGAGTTGTTGATTTATACTATAAAATTTTCCCTAATGTTTTGATTAATTTTTCAATTACATCCGAACTTTTTGTTATATTATCAATTATCAATTTTATCTAAACAATGTGTTAAAAATTTTCAATGAACTCATTTTGTAAAAAAAAAAAATGATATTATATATGTTGATGGTCAAATTTGGACTGGAAGAACTCACCTGACCTTCACGGAATTTGTATGATAGGGGGGAAGACGTGGCCTGCAAGACAGAAAAACATGCACACCAGTGTGGTGCTTGCCAAATCGCCTCCGATGCTTAAGTCAGCAAGCAGAACGATGGGAAGCAAGAGCAAGAGTAAGAGGAGAGTCATAGAATATAGTTTGGGATTCGGGTTTAAATACATTTTCCTGCCTTAGGCTTTCTAGGCATTCGGAGAGGATTTAGGCTGAACCAGGTGGAACCGGGACATCTAGGGGCACTAGGGATCGAGCGGAGGGGAGGAGACTCGACCCACACAAGTGGGTCGAGCATGGGATTGGGCCGGGATGACCCAATCCCTTCAGCTCACCTTCCTTCGGGGTCCGCTTCCTAG ATGTACTCTCGACCAAGAGTACAATCCATCCGTTGTTTTAATCTTGCTCTTCTGGCGAAACAAGGGTGGAGGATTCTCAAATGCCCAGATAGCTTATTATCAAGGATATATAAGGATCGTTATTTCAAGCACACTGATTTTTTAGGGGCGACGGCTAAGGGGCGAGTTTCATGGGGTTGGCGAAGTATCATAGATGGGAGAGATGTTCTTCGACAAGGGTTTTGTTGGCGGGTAGGCATGGAGACGAAATTAAAGATCTGGGAAGATCCTTGGGTACCAAGGCCCTCAACGTTTAAACCACTGCGATGTTTGAATAATGAGTGGAGCTTGGTTAAAGATTTGTTGGAAGAGAATGGGTCAAAATGGAGGGGAGATCGTTTGAGAAGTTCATTATCGCCTGAGGATGTGGAGTTGGTTATGGCTATTCCGATCAGCAGAAGAGAGGCTACCGATCGAGCAGTATGGCACTTTACAAACTCCGGGGATTTTGCTGTGAGTTGGGAGAAAATATATCTAAGAATGGAAGGGAAGGATAATTCGGATGAGGCCCTCTGTTACCTAGGACATGGGTTGTGGAGGGTTTGGAAGGAAAGGAATGCGGTGATTTTCAAAAACAAGGCTCCGGAAATTGAGAATAACATTGTATTCACCATCAGAGATGTTAGTGAATACAGAAAAGCTGTGGGAGAGGCAGCAATTGGGGGGAAGACGTGGCCTGCAAGACAGAAAAACATGCACACCAGTGTGGTGCTTGCCAAATCGCCTCCGATGCTTAAGTCAGCAAGCAGAACGATGGGAAGCAAGAGCAAGAGCTTTCTAGGCATTCGGAGAGGATTTAGGCTGAACCAGGTGGAACCGGGACATCTAGGGGCACTAGGGATCGAGCGGAGGGGAGGAGACTCGACCCACACAAGTGGGTCGAGCATGGGATTGGGCCGGGATGACCCAATCCCTTCAGCTCACCTTCCTTCGGGGTCCGCTTCCTAG ATGTACTCTCGACCAAGAGTACAATCCATCCGTTGTTTTAATCTTGCTCTTCTGGCGAAACAAGGGTGGAGGATTCTCAAATGCCCAGATAGCTTATTATCAAGGATATATAAGGATCGTTATTTCAAGCACACTGATTTTTTAGGGGCGACGGCTAAGGGGCGAGTTTCATGGGGTTGGCGAAGTATCATAGATGGGAGAGATGTTCTTCGACAAGGGTTTTGTTGGCGGGTAGGCATGGAGACGAAATTAAAGATCTGGGAAGATCCTTGGGTACCAAGGCCCTCAACGTTTAAACCACTGCGATGTTTGAATAATGAGTGGAGCTTGGTTAAAGATTTGTTGGAAGAGAATGGGTCAAAATGGAGGGGAGATCGTTTGAGAAGTTCATTATCGCCTGAGGATGTGGAGTTGGTTATGGCTATTCCGATCAGCAGAAGAGAGGCTACCGATCGAGCAGTATGGCACTTTACAAACTCCGGGGATTTTGCTGTGAGTTGGGAGAAAATATATCTAAGAATGGAAGGGAAGGATAATTCGGATGAGGCCCTCTGTTACCTAGGACATGGGTTGTGGAGGGTTTGGAAGGAAAGGAATGCGGTGATTTTCAAAAACAAGGCTCCGGAAATTGAGAATAACATTGTATTCACCATCAGAGATGTTAGTGAATACAGAAAAGCTGTGGGAGAGGCAGCAATTGGGGGGAAGACGTGGCCTGCAAGACAGAAAAACATGCACACCAGTGTGGTGCTTGCCAAATCGCCTCCGATGCTTAAGTCAGCAAGCAGAACGATGGGAAGCAAGAGCAAGAGCTTTCTAGGCATTCGGAGAGGATTTAGGCTGAACCAGGTGGAACCGGGACATCTAGGGGCACTAGGGATCGAGCGGAGGGGAGGAGACTCGACCCACACAAGTGGGTCGAGCATGGGATTGGGCCGGGATGACCCAATCCCTTCAGCTCACCTTCCTTCGGGGTCCGCTTCCTAG MYSRPRVQSIRCFNLALLAKQGWRILKCPDSLLSRIYKDRYFKHTDFLGATAKGRVSWGWRSIIDGRDVLRQGFCWRVGMETKLKIWEDPWVPRPSTFKPLRCLNNEWSLVKDLLEENGSKWRGDRLRSSLSPEDVELVMAIPISRREATDRAVWHFTNSGDFAVSWEKIYLRMEGKDNSDEALCYLGHGLWRVWKERNAVIFKNKAPEIENNIVFTIRDVSEYRKAVGEAAIGGKTWPARQKNMHTSVVLAKSPPMLKSASRTMGSKSKSFLGIRRGFRLNQVEPGHLGALGIERRGGDSTHTSGSSMGLGRDDPIPSAHLPSGSAS Homology
BLAST of Spg013169 vs. NCBI nr
Match: XP_021818901.1 (uncharacterized protein LOC110760860 [Prunus avium]) HSP 1 Score: 176.8 bits (447), Expect = 3.1e-40 Identity = 86/236 (36.44%), Postives = 128/236 (54.24%), Query Frame = 0
BLAST of Spg013169 vs. NCBI nr
Match: XP_009757415.1 (PREDICTED: uncharacterized protein LOC104210254 [Nicotiana sylvestris]) HSP 1 Score: 159.1 bits (401), Expect = 6.6e-35 Identity = 78/213 (36.62%), Postives = 119/213 (55.87%), Query Frame = 0
BLAST of Spg013169 vs. NCBI nr
Match: XP_016458490.1 (PREDICTED: uncharacterized protein LOC107782157 [Nicotiana tabacum]) HSP 1 Score: 156.0 bits (393), Expect = 5.6e-34 Identity = 67/160 (41.88%), Postives = 102/160 (63.75%), Query Frame = 0
BLAST of Spg013169 vs. NCBI nr
Match: XP_016455260.1 (PREDICTED: uncharacterized protein LOC107779354 [Nicotiana tabacum]) HSP 1 Score: 155.6 bits (392), Expect = 7.3e-34 Identity = 76/213 (35.68%), Postives = 117/213 (54.93%), Query Frame = 0
BLAST of Spg013169 vs. NCBI nr
Match: XP_008359713.2 (uncharacterized protein LOC103423419 [Malus domestica]) HSP 1 Score: 154.5 bits (389), Expect = 1.6e-33 Identity = 82/242 (33.88%), Postives = 118/242 (48.76%), Query Frame = 0
BLAST of Spg013169 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.8e-14 Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of Spg013169 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 5.0e-09 Identity = 51/170 (30.00%), Postives = 80/170 (47.06%), Query Frame = 0
BLAST of Spg013169 vs. ExPASy TrEMBL
Match: A0A6P5SYW2 (uncharacterized protein LOC110760860 OS=Prunus avium OX=42229 GN=LOC110760860 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 1.5e-40 Identity = 86/236 (36.44%), Postives = 128/236 (54.24%), Query Frame = 0
BLAST of Spg013169 vs. ExPASy TrEMBL
Match: A0A2N9H9S6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS36216 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 1.9e-35 Identity = 78/176 (44.32%), Postives = 105/176 (59.66%), Query Frame = 0
BLAST of Spg013169 vs. ExPASy TrEMBL
Match: A0A1U7V6R2 (uncharacterized protein LOC104210254 OS=Nicotiana sylvestris OX=4096 GN=LOC104210254 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 3.2e-35 Identity = 78/213 (36.62%), Postives = 119/213 (55.87%), Query Frame = 0
BLAST of Spg013169 vs. ExPASy TrEMBL
Match: A0A2N9GW67 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31640 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 7.2e-35 Identity = 81/193 (41.97%), Postives = 113/193 (58.55%), Query Frame = 0
BLAST of Spg013169 vs. ExPASy TrEMBL
Match: A0A2N9IMU5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54064 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.2e-34 Identity = 73/160 (45.62%), Postives = 100/160 (62.50%), Query Frame = 0
BLAST of Spg013169 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 105.5 bits (262), Expect = 8.1e-23 Identity = 56/167 (33.53%), Postives = 88/167 (52.69%), Query Frame = 0
BLAST of Spg013169 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 81.6 bits (200), Expect = 1.3e-15 Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of Spg013169 vs. TAIR 10
Match: AT2G22440.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1); Has 208 Blast hits to 191 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.6 bits (166), Expect = 1.1e-11 Identity = 38/180 (21.11%), Postives = 80/180 (44.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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