Spg013087 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg013087
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RING-type E3 ubiquitin transferase
Location	scaffold1: 18693078 .. 18693998 (-)
RNA-Seq Expression	Spg013087
Synteny	Spg013087

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAATGGGCGGAACACCCATTGGTGTTATAGATGCAGAAGGTCAATACGTCTTCGTGGTCGGGATGCAGTTTGCCCGAACTGTAATGCAGGATTTATCCAAGAACTTGATGATATGGTGCCTGGAAATCCATTTGATTACTTTGGACTGGGTCATGATGAAGATCGTGATCATGGGATGGAAGCATTCTCTGCTTTCATGAGTCAACGGTTAGCTGAAAGAAATGACCTGAGGGGAAGATTGAGGGGAAGATCAGAGTCGCTTTTCGAGCGTGGCCCGGGATTTGGTCCTCTATTAATATTTGGTGGTCAAATACCATTGAGAAACAGTAGGTTAGAAGCATTGTTCAATGGGGCTCCTGGCATTGGTATTACACGGGGCGATAGCGGCGACTACTTTATAGGCCCTGGACTGGAGGAACTATTTGAACAGCTTTCCGCAAATGGTCATCGTGGCCCTCCGCCAGCATCTAGATCATCTATTGATGCAATGCCAACAGTTAAGATCACACAACGTCATCTTCGTTCGGATTCACATTGTCCAGTTTGCAAAGAAAAATTTGAACTGGGGTCTGAAGCAAGGCAGATGCCCTGTAATCACATGTACCACTCAGATTGTATTGTTCCATGGCTGGTCCAGCACAACTCTTGCCCTGTCTGCCGCCAGGAACTGCCACCACAGGTAATTGGTGGCGGGGGTGGGGGTGGTGGCCATAGCACCAATGGTCAAAACCGAAGCAGCAGCTACAACAACAACGGCAATGGCTCCCGAGTTAATCCAGGAAGACGGAATCCATTATCTTATCTTTGGCCATTTCGGTCATCGAATTCCAGCTCCAACCATGGTGGAGCGGGGAGCAGTGAACCGTCGAACCACCAGATGGGGTATTCGGGATACCGATACACTAATTCACCATGA

mRNA sequence

ATGTCGAATGGGCGGAACACCCATTGGTGTTATAGATGCAGAAGGTCAATACGTCTTCGTGGTCGGGATGCAGTTTGCCCGAACTGTAATGCAGGATTTATCCAAGAACTTGATGATATGGTGCCTGGAAATCCATTTGATTACTTTGGACTGGGTCATGATGAAGATCGTGATCATGGGATGGAAGCATTCTCTGCTTTCATGAGTCAACGGTTAGCTGAAAGAAATGACCTGAGGGGAAGATTGAGGGGAAGATCAGAGTCGCTTTTCGAGCGTGGCCCGGGATTTGGTCCTCTATTAATATTTGGTGGTCAAATACCATTGAGAAACAGTAGGTTAGAAGCATTGTTCAATGGGGCTCCTGGCATTGGTATTACACGGGGCGATAGCGGCGACTACTTTATAGGCCCTGGACTGGAGGAACTATTTGAACAGCTTTCCGCAAATGGTCATCGTGGCCCTCCGCCAGCATCTAGATCATCTATTGATGCAATGCCAACAGTTAAGATCACACAACGTCATCTTCGTTCGGATTCACATTGTCCAGTTTGCAAAGAAAAATTTGAACTGGGGTCTGAAGCAAGGCAGATGCCCTGTAATCACATGTACCACTCAGATTGTATTGTTCCATGGCTGGTCCAGCACAACTCTTGCCCTGTCTGCCGCCAGGAACTGCCACCACAGGTAATTGGTGGCGGGGGTGGGGGTGGTGGCCATAGCACCAATGGTCAAAACCGAAGCAGCAGCTACAACAACAACGGCAATGGCTCCCGAGTTAATCCAGGAAGACGGAATCCATTATCTTATCTTTGGCCATTTCGGTCATCGAATTCCAGCTCCAACCATGGTGGAGCGGGGAGCAGTGAACCGTCGAACCACCAGATGGGGTATTCGGGATACCGATACACTAATTCACCATGA

Coding sequence (CDS)

ATGTCGAATGGGCGGAACACCCATTGGTGTTATAGATGCAGAAGGTCAATACGTCTTCGTGGTCGGGATGCAGTTTGCCCGAACTGTAATGCAGGATTTATCCAAGAACTTGATGATATGGTGCCTGGAAATCCATTTGATTACTTTGGACTGGGTCATGATGAAGATCGTGATCATGGGATGGAAGCATTCTCTGCTTTCATGAGTCAACGGTTAGCTGAAAGAAATGACCTGAGGGGAAGATTGAGGGGAAGATCAGAGTCGCTTTTCGAGCGTGGCCCGGGATTTGGTCCTCTATTAATATTTGGTGGTCAAATACCATTGAGAAACAGTAGGTTAGAAGCATTGTTCAATGGGGCTCCTGGCATTGGTATTACACGGGGCGATAGCGGCGACTACTTTATAGGCCCTGGACTGGAGGAACTATTTGAACAGCTTTCCGCAAATGGTCATCGTGGCCCTCCGCCAGCATCTAGATCATCTATTGATGCAATGCCAACAGTTAAGATCACACAACGTCATCTTCGTTCGGATTCACATTGTCCAGTTTGCAAAGAAAAATTTGAACTGGGGTCTGAAGCAAGGCAGATGCCCTGTAATCACATGTACCACTCAGATTGTATTGTTCCATGGCTGGTCCAGCACAACTCTTGCCCTGTCTGCCGCCAGGAACTGCCACCACAGGTAATTGGTGGCGGGGGTGGGGGTGGTGGCCATAGCACCAATGGTCAAAACCGAAGCAGCAGCTACAACAACAACGGCAATGGCTCCCGAGTTAATCCAGGAAGACGGAATCCATTATCTTATCTTTGGCCATTTCGGTCATCGAATTCCAGCTCCAACCATGGTGGAGCGGGGAGCAGTGAACCGTCGAACCACCAGATGGGGTATTCGGGATACCGATACACTAATTCACCATGA

Protein sequence

MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYFGLGHDEDRDHGMEAFSAFMSQRLAERNDLRGRLRGRSESLFERGPGFGPLLIFGGQIPLRNSRLEALFNGAPGIGITRGDSGDYFIGPGLEELFEQLSANGHRGPPPASRSSIDAMPTVKITQRHLRSDSHCPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQVIGGGGGGGGHSTNGQNRSSSYNNNGNGSRVNPGRRNPLSYLWPFRSSNSSSNHGGAGSSEPSNHQMGYSGYRYTNSP

Homology

[Close]

BLAST of Spg013087 vs. NCBI nr
Match: XP_038882645.1 (probable E3 ubiquitin-protein ligase RHC1A [Benincasa hispida] >XP_038882646.1 probable E3 ubiquitin-protein ligase RHC1A [Benincasa hispida] >XP_038882647.1 probable E3 ubiquitin-protein ligase RHC1A [Benincasa hispida] >XP_038882648.1 probable E3 ubiquitin-protein ligase RHC1A [Benincasa hispida] >XP_038882649.1 probable E3 ubiquitin-protein ligase RHC1A [Benincasa hispida] >XP_038882650.1 probable E3 ubiquitin-protein ligase RHC1A [Benincasa hispida])

HSP 1 Score: 575.9 bits (1483), Expect = 2.1e-160
Identity = 278/312 (89.10%), Postives = 288/312 (92.31%), Query Frame = 0


Query: 1   MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYFGLGHDEDRDHG 60
           MS GRNTHWCYRCRRS+RL GRDAVCP+CN GFIQELDDMVPGNPFD+FGL HDEDRDHG
Sbjct: 1   MSTGRNTHWCYRCRRSVRLHGRDAVCPSCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  MEAFSAFMSQRLAERNDLRGRLRGRSESLFERGPGFGPLLIFGGQIPLRNSRLEALFNGA 120
           + AFSAFM QRL ERND    +RGRSESLFER PGFGPLLIFGGQIPLRNSRLEALFNGA
Sbjct: 61  LGAFSAFMRQRLVERND----MRGRSESLFERSPGFGPLLIFGGQIPLRNSRLEALFNGA 120

Query: 121 PGIGITRGDSGDYFIGPGLEELFEQLSANGHRGPPPASRSSIDAMPTVKITQRHLRSDSH 180
           PGIGITRGDSGDYFIGPGLEELFEQLSANGHRGPPPASRSSIDAMPTV ITQRHLRSDSH
Sbjct: 121 PGIGITRGDSGDYFIGPGLEELFEQLSANGHRGPPPASRSSIDAMPTVNITQRHLRSDSH 180

Query: 181 CPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQVI------GGGG 240
           CPVCKEKFELG EARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQ I      GGGG
Sbjct: 181 CPVCKEKFELGCEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQGIGGGGGGGGGG 240

Query: 241 GGGGHSTNGQNRSSSYNNNGNGSRVNPGRRNPLSYLWPFRSSNSSSNHGGAGSSEPSNHQ 300
           GGGGH+TNGQNRS+SY  NG+GSRVNPGRRNP SYLWPFRSS+SSSNHGGAGSSEP+NHQ
Sbjct: 241 GGGGHNTNGQNRSNSY--NGSGSRVNPGRRNPFSYLWPFRSSSSSSNHGGAGSSEPTNHQ 300

Query: 301 MGYSGYRYTNSP 307
           MGYSGYRYTNSP
Sbjct: 301 MGYSGYRYTNSP 306

[Close]

BLAST of Spg013087 vs. NCBI nr
Match: XP_004144313.1 (probable E3 ubiquitin-protein ligase RHC1A [Cucumis sativus] >XP_004144314.1 probable E3 ubiquitin-protein ligase RHC1A [Cucumis sativus] >XP_011653845.1 probable E3 ubiquitin-protein ligase RHC1A [Cucumis sativus] >XP_031739891.1 probable E3 ubiquitin-protein ligase RHC1A [Cucumis sativus] >KGN54669.1 hypothetical protein Csa_012618 [Cucumis sativus])

HSP 1 Score: 572.4 bits (1474), Expect = 2.3e-159
Identity = 277/306 (90.52%), Postives = 287/306 (93.79%), Query Frame = 0


Query: 1   MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYFGLGHDEDRDHG 60
           MS GRNTHWCYRCRRS+RLRGRDAVCPNCN GFIQELDDMVPGNPFD+FGL HDEDRDHG
Sbjct: 1   MSAGRNTHWCYRCRRSVRLRGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  MEAFSAFMSQRLAERNDLRGRLRGRSESLFERGPGFGPLLIFGGQIPLRNSRLEALFNGA 120
           + AFSAFM QRLAERND    +RGRSESLFE  PGFGPLLIFGGQIPLRNSRLEALFNGA
Sbjct: 61  LGAFSAFMRQRLAERND----MRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGA 120

Query: 121 PGIGITRGDSGDYFIGPGLEELFEQLSANGHRGPPPASRSSIDAMPTVKITQRHLRSDSH 180
           PGIGITRGDSGDYFIGPGLEELFEQLS NGHRGPPPASRSSIDAMPTVKITQRHLRSDSH
Sbjct: 121 PGIGITRGDSGDYFIGPGLEELFEQLSENGHRGPPPASRSSIDAMPTVKITQRHLRSDSH 180

Query: 181 CPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQVIGGGGGGGGHS 240
           CPVCKEKFELGSEARQM CNHMYHSDCIVPWL+QHNSCPVCRQELPPQ  G GGGGGGHS
Sbjct: 181 CPVCKEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPPQ--GIGGGGGGHS 240

Query: 241 TNGQNRSSSYNNNGNGSRVNPGRRNPLSYLWPFRSSNSSSNHGGAGSSEPSNHQMGYSGY 300
           TN QNRS+SY NNG+GSRVNPGRRNP SYLWPFRSS+S+SNHGGAGSSEPSNHQMGYSGY
Sbjct: 241 TNDQNRSNSY-NNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGY 299

Query: 301 RYTNSP 307
           RYT+SP
Sbjct: 301 RYTSSP 299

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BLAST of Spg013087 vs. NCBI nr
Match: XP_008455755.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >XP_008455756.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >XP_008455757.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >KAA0025786.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK09669.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa])

HSP 1 Score: 564.7 bits (1454), Expect = 4.9e-157
Identity = 274/306 (89.54%), Postives = 285/306 (93.14%), Query Frame = 0


Query: 1   MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYFGLGHDEDRDHG 60
           MS GRNTHWCYRCRRS+RL GRDAVCPNCN GFIQELDDMVPGNPFD+FGL HDEDRDHG
Sbjct: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  MEAFSAFMSQRLAERNDLRGRLRGRSESLFERGPGFGPLLIFGGQIPLRNSRLEALFNGA 120
           + AFSAFM QRLAERND    +RGRSESLFE  PGFGPLLIFGGQIPLRNSRLEALFNGA
Sbjct: 61  LGAFSAFMRQRLAERND----MRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGA 120

Query: 121 PGIGITRGDSGDYFIGPGLEELFEQLSANGHRGPPPASRSSIDAMPTVKITQRHLRSDSH 180
           PGIGITRGDSGDYFIGPGLEELFE+LSANGHRGPPPASRSSIDAMPTVKIT RHLRSDSH
Sbjct: 121 PGIGITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSH 180

Query: 181 CPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQVIGGGGGGGGHS 240
           CPVCKEKFELGSEARQM CNHMYHSDCIVPWL+QHNSCPVCRQELP Q  G GGGGGGHS
Sbjct: 181 CPVCKEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQ--GIGGGGGGHS 240

Query: 241 TNGQNRSSSYNNNGNGSRVNPGRRNPLSYLWPFRSSNSSSNHGGAGSSEPSNHQMGYSGY 300
           TN QNRS+SY +NG+GSRVNPGRRNP SYLWPFRSS+S+SNHGGAGSSEPSNHQMGYSGY
Sbjct: 241 TNDQNRSNSY-SNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGY 299

Query: 301 RYTNSP 307
           RYTNSP
Sbjct: 301 RYTNSP 299

[Close]

BLAST of Spg013087 vs. NCBI nr
Match: XP_022154478.1 (probable E3 ubiquitin-protein ligase RHC1A [Momordica charantia])

HSP 1 Score: 557.4 bits (1435), Expect = 7.8e-155
Identity = 272/313 (86.90%), Postives = 285/313 (91.05%), Query Frame = 0


Query: 1   MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYFGLGHDEDRDHG 60
           MS+GRNTHWCYRCRRS+ LRGRDAVCPNCN GFIQELDDMVP NPFD+FGL HDEDR  G
Sbjct: 1   MSSGRNTHWCYRCRRSVHLRGRDAVCPNCNGGFIQELDDMVPSNPFDFFGLDHDEDRGQG 60

Query: 61  MEAFSAFMSQRLAERNDLRGRLRGRSESLFERGPGFGPLLIFGGQIPLRNSRLEALFNGA 120
           + AFSAFM QRLAERND    +RGRSES+FER PGFGPLLIFGGQIPLRNSRLEALF+GA
Sbjct: 61  LGAFSAFMRQRLAERND----MRGRSESVFERSPGFGPLLIFGGQIPLRNSRLEALFSGA 120

Query: 121 PGIGITRGDSGDYFIGPGLEELFEQLSANGHRGPPPASRSSIDAMPTVKITQRHLRSDSH 180
           PGIGITRGDSGDYFIGPGLEELFEQLS NG+RGPPPASRSSIDAMPTVKITQRHLRSDSH
Sbjct: 121 PGIGITRGDSGDYFIGPGLEELFEQLSVNGNRGPPPASRSSIDAMPTVKITQRHLRSDSH 180

Query: 181 CPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQVIGGGGG--GGG 240
           CPVCK+KFELGSEARQMPCNHMYHSDCI+PWLVQHNSCPVCRQELPPQ IGGGGG  GGG
Sbjct: 181 CPVCKDKFELGSEARQMPCNHMYHSDCIIPWLVQHNSCPVCRQELPPQGIGGGGGGAGGG 240

Query: 241 HSTNGQNR-SSSYNNNGNGSRVNPGRRNPLSYLWPFRSSNSSSNH----GGAGSSEPSNH 300
           HSTNGQNR SSSYNNN NGSRVNPGRRNP SYLWPFRSSNS SNH    GGAGSSEP NH
Sbjct: 241 HSTNGQNRSSSSYNNNSNGSRVNPGRRNPFSYLWPFRSSNSRSNHSGGGGGAGSSEPMNH 300

Query: 301 QMGYSGYRYTNSP 307
           QM Y G+++TNSP
Sbjct: 301 QMEYPGWQFTNSP 309

[Close]

BLAST of Spg013087 vs. NCBI nr
Match: XP_023517925.1 (probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo] >XP_023517926.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 548.5 bits (1412), Expect = 3.6e-152
Identity = 266/300 (88.67%), Postives = 275/300 (91.67%), Query Frame = 0


Query: 1   MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYFGLGHDEDRDHG 60
           MS+G+NTHWCYRCRRSIRL GRDAVCPNCN GFIQELDDMVPGNPFD+FGL HDEDRDHG
Sbjct: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  MEAFSAFMSQRLAERNDLRGRLRGRSESLFERGPGFGPLLIFGGQIPLRNSRLEALFNGA 120
           + AFSAFM QRLAERND    +RGRSESLFER PGFGPLLIFGGQIPLRN RLEALFNGA
Sbjct: 61  LGAFSAFMRQRLAERND----MRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGA 120

Query: 121 PGIGITRGDSGDYFIGPGLEELFEQLSANGHRGPPPASRSSIDAMPTVKITQRHLRSDSH 180
           PGIGITRGD GDYFIGPGLEELFEQLS NGHRGPPPASRS IDAMPTVKITQRHLRSDSH
Sbjct: 121 PGIGITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSH 180

Query: 181 CPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQVIGGGGGGGGHS 240
           CPVCKEKFELGSEARQM CNHMYHSDCIVPWLVQHNSCPVCRQELPPQV+    GGGGH+
Sbjct: 181 CPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVM----GGGGHN 240

Query: 241 TNGQNRSSSYNNNGNG-SRVNPGRRNPLSYLWPFRSSNSSSNHGGAGSSEPSNHQMGYSG 300
           TN QNR++SYNNNGNG SRVNPGRRNP SYLWPFRSSNSSSNHGGAGSSE  NH MGYSG
Sbjct: 241 TNSQNRNNSYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHPMGYSG 292

[Close]

BLAST of Spg013087 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.5e-87
Identity = 185/325 (56.92%), Postives = 225/325 (69.23%), Query Frame = 0


Query: 1   MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYF----GLGHDED 60
           MS+ RNTHWC+RC+R++RL G++ VC  C  GF++EL DM   +PFD F    G+   + 
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEEL-DMAQASPFDMFRSHRGVVERDQ 60

Query: 61  RDHGMEAFSAFMSQRLAERNDLRGRLRGRS-ESLFERGPGFGPLLIFGGQIPLR---NSR 120
               M+AFS FM  RLAER+  R  +RGR+  S  E  PG  PLLIFGGQ+P R   ++ 
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDR-EIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNA 120

Query: 121 LEALFN-GAPGIGITRGDSGDYFIGPGLEELFEQLSA-NGHRGPPPASRSSIDAMPTVKI 180
           +EALFN G+PGIGITRG++GDYF GPGLEELFEQLSA    RGPPPA RS+IDA+PT+KI
Sbjct: 121 VEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKI 180

Query: 181 TQRHLR-SDSHCPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQV 240
            QRHLR SDS+CPVCK++FELGSEA+QMPCNH+YHSDCIVPWLVQHNSCPVCRQELP   
Sbjct: 181 AQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS-- 240

Query: 241 IGGGGGGGGHSTNGQNRSSSYNNNGNGSRVNPG-RRNPLSYLWPFRSSNSSS----NHGG 300
             G       +T  +N  SS +++ + SR N   RRNP S  WPFRSS SSS    N GG
Sbjct: 241 ASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGG 300

[Close]

BLAST of Spg013087 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.1e-78
Identity = 168/312 (53.85%), Postives = 207/312 (66.35%), Query Frame = 0


Query: 1   MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYFGLGHDEDRDHG 60
           MS+ RNTHWC+RC+R++ LR RDAVC  C  GF++E+ D+ P           D +RD  
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEI-DIGPSRAH------RDVERDPT 60

Query: 61  ---MEAFSAFMSQRLAERN---DLRGRLRGRSESLFERGPGFGPLLIFGGQIPLR----- 120
              MEAFSAFM  RLAER+   ++ GRL       F       PLLIFGGQ P R     
Sbjct: 61  FDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFS---NLAPLLIFGGQAPFRLAGGD 120

Query: 121 NSRLEALFNG-APGIGITRG-DSGDYFIGPGLEELFEQLSA-NGHRGPPPASRSSIDAMP 180
           NS +EA  NG APGIGI RG ++GDYF GPGLEEL EQLS+   HRGPPPA +SSIDA+P
Sbjct: 121 NSSVEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALP 180

Query: 181 TVKITQRHLR-SDSHCPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQEL 240
           T+KITQ+HL+ SDSHCPVCK++FEL SEA+QMPC+H+YHSDCIVPWLVQHNSCPVCR+EL
Sbjct: 181 TIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 240

Query: 241 PPQVIGGGGGGGGHSTNGQNRSSSYNNNGNGSRVNPGRRNPLSYLWPFRSSNSSSNHGGA 298
           P +      G    + + QNRS++        R N  RRN  S LWPFRSS+SSS     
Sbjct: 241 PSR------GSSSSTQSSQNRSTN-------GRENSRRRNIFSNLWPFRSSSSSSTQNRR 289

[Close]

BLAST of Spg013087 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.9e-36
Identity = 102/318 (32.08%), Postives = 150/318 (47.17%), Query Frame = 0


Query: 9   WCYRCRRSIRL---RGRDAVCPNCNAGFIQELDDMVPGNPFDY----------------- 68
           +CY+C +++ +      D  CP CN GF++E +D  P    ++                 
Sbjct: 22  FCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPFST 81

Query: 69  ---FGLGHDEDRDHGMEAFSAFMSQRLAERNDLRGRLRGRSESLFERGPGFGPLLIFGGQ 128
                 G       GM+  S F             + + RS     +   F P       
Sbjct: 82  LLPLIFGSSAAAPSGMDFMSLFGPSM---------QPQARSTQQNPQSDAFDPFTFLQNH 141

Query: 129 I-PLRNS--RLEALFNGAPGIGITR--GDSGDYFIGPGLEELFEQLSAN--GHRGPPPAS 188
           +  LR+S    E +    P     R  G+ GDYF GPGLE+L +QL+ N     G PPAS
Sbjct: 142 LQTLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPAS 201

Query: 189 RSSIDAMPTVKITQRHLRSD-SHCPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNS 248
           +S+IDA+PTVK+T+  L+S+ + C VC ++FE GS+ +QMPC H++H DC++PWL  HNS
Sbjct: 202 KSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNS 261

Query: 249 CPVCRQELPPQVIGGGGGGGGHSTNGQNRSSSYNNNGNGSRVNPGRRNP---LSYLWPFR 293
           CPVCR ELP               + +NRS     +G+G     G++ P   +   WPFR
Sbjct: 262 CPVCRFELPTD-----------DPDYENRSQGSQGSGDGQGSVEGQQTPRFSIQLPWPFR 319

[Close]

BLAST of Spg013087 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.7e-33
Identity = 102/302 (33.77%), Postives = 150/302 (49.67%), Query Frame = 0


Query: 9   WCYRCRRSIRLR----GRDAVCPNCNAGFIQELDDMVPGNPFDYFGLGHDEDRDHGM--- 68
           +CY+C R++ +       D  CP CN GF++E D+  P     +     +    H +   
Sbjct: 24  FCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHDLFLT 83

Query: 69  -------------EAFSAFMSQRLAERNDLRGRLRGRSESLFERGPGFGPLLIFGGQI-P 128
                         + S+  +   A  +     L G + S       F P       +  
Sbjct: 84  LSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFTFIQNHLND 143

Query: 129 LRNS--RLEALFNGAPGIGITR--GDSGDYFIGPGLEELFEQLSAN--GHRGPPPASRSS 188
           LR+S  ++E +    P     R   + GDYFIGPGLE+L +QL+ N     G PPAS+S+
Sbjct: 144 LRSSGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSA 203

Query: 189 IDAMPTVKITQRHLRSD-SHCPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPV 248
           I+A+P V IT+ +L S+ + C VC + FE G+EA+QMPC H+YH DC++PWL  HNSCPV
Sbjct: 204 IEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPV 263

Query: 249 CRQELPP-------QVIGGGGGGGGHSTNGQNRSSSYNNNGNGSRVNPGRRNPLSYLWPF 276
           CR ELP        +V G  G  GG+  +G N  S   ++G+   V    R  +S  WPF
Sbjct: 264 CRHELPTDDPDYERRVRGAQGTSGGN--DGDN--SGQRSDGDNRTVERSFR--ISLPWPF 319

[Close]

BLAST of Spg013087 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.7e-30
Identity = 81/249 (32.53%), Postives = 121/249 (48.59%), Query Frame = 0


Query: 7   THWCYRCRRSIRL---RGRDAV----CPNCNAGFIQELDDMVPGNPFDYFGLGHDEDRDH 66
           ++WCY C R + +   +G   V    CP+C+ GFI++++D                  + 
Sbjct: 17  SYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQIND------------SSSAATEL 76

Query: 67  GMEAFSAFMSQRLAERNDLRGRLRGRSESLFERGPGFGPLLIFGGQIPLRNS-------- 126
            + A +   S     R+ +R R  GR        P F P+++  G    R          
Sbjct: 77  TIPASTEVRSINNNRRSVIRRRRSGRR-------PSFNPVIVLQGGAGEREEGEEGDAAR 136

Query: 127 ---RLEALFNGAPGIGI--TRGDSGDYFIGPGLEELFEQLS-------ANGHRGPPPASR 186
                E  ++   G G+        +  +G G E L EQLS         G  G PPAS+
Sbjct: 137 DRRAFEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASK 196

Query: 187 SSIDAMPTVKITQRHLRSDSHCPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCP 229
           S+I+++P V+I+  H+ S+++C VC E FE  +EAR+MPC H++H DCIVPWL   NSCP
Sbjct: 197 SAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCP 246

[Close]

BLAST of Spg013087 vs. ExPASy TrEMBL
Match: A0A0A0L0T9 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_4G419610 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.1e-159
Identity = 277/306 (90.52%), Postives = 287/306 (93.79%), Query Frame = 0


Query: 1   MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYFGLGHDEDRDHG 60
           MS GRNTHWCYRCRRS+RLRGRDAVCPNCN GFIQELDDMVPGNPFD+FGL HDEDRDHG
Sbjct: 1   MSAGRNTHWCYRCRRSVRLRGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  MEAFSAFMSQRLAERNDLRGRLRGRSESLFERGPGFGPLLIFGGQIPLRNSRLEALFNGA 120
           + AFSAFM QRLAERND    +RGRSESLFE  PGFGPLLIFGGQIPLRNSRLEALFNGA
Sbjct: 61  LGAFSAFMRQRLAERND----MRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGA 120

Query: 121 PGIGITRGDSGDYFIGPGLEELFEQLSANGHRGPPPASRSSIDAMPTVKITQRHLRSDSH 180
           PGIGITRGDSGDYFIGPGLEELFEQLS NGHRGPPPASRSSIDAMPTVKITQRHLRSDSH
Sbjct: 121 PGIGITRGDSGDYFIGPGLEELFEQLSENGHRGPPPASRSSIDAMPTVKITQRHLRSDSH 180

Query: 181 CPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQVIGGGGGGGGHS 240
           CPVCKEKFELGSEARQM CNHMYHSDCIVPWL+QHNSCPVCRQELPPQ  G GGGGGGHS
Sbjct: 181 CPVCKEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPPQ--GIGGGGGGHS 240

Query: 241 TNGQNRSSSYNNNGNGSRVNPGRRNPLSYLWPFRSSNSSSNHGGAGSSEPSNHQMGYSGY 300
           TN QNRS+SY NNG+GSRVNPGRRNP SYLWPFRSS+S+SNHGGAGSSEPSNHQMGYSGY
Sbjct: 241 TNDQNRSNSY-NNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGY 299

Query: 301 RYTNSP 307
           RYT+SP
Sbjct: 301 RYTSSP 299

[Close]

BLAST of Spg013087 vs. ExPASy TrEMBL
Match: A0A1S3C178 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103495857 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.4e-157
Identity = 274/306 (89.54%), Postives = 285/306 (93.14%), Query Frame = 0


Query: 1   MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYFGLGHDEDRDHG 60
           MS GRNTHWCYRCRRS+RL GRDAVCPNCN GFIQELDDMVPGNPFD+FGL HDEDRDHG
Sbjct: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  MEAFSAFMSQRLAERNDLRGRLRGRSESLFERGPGFGPLLIFGGQIPLRNSRLEALFNGA 120
           + AFSAFM QRLAERND    +RGRSESLFE  PGFGPLLIFGGQIPLRNSRLEALFNGA
Sbjct: 61  LGAFSAFMRQRLAERND----MRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGA 120

Query: 121 PGIGITRGDSGDYFIGPGLEELFEQLSANGHRGPPPASRSSIDAMPTVKITQRHLRSDSH 180
           PGIGITRGDSGDYFIGPGLEELFE+LSANGHRGPPPASRSSIDAMPTVKIT RHLRSDSH
Sbjct: 121 PGIGITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSH 180

Query: 181 CPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQVIGGGGGGGGHS 240
           CPVCKEKFELGSEARQM CNHMYHSDCIVPWL+QHNSCPVCRQELP Q  G GGGGGGHS
Sbjct: 181 CPVCKEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQ--GIGGGGGGHS 240

Query: 241 TNGQNRSSSYNNNGNGSRVNPGRRNPLSYLWPFRSSNSSSNHGGAGSSEPSNHQMGYSGY 300
           TN QNRS+SY +NG+GSRVNPGRRNP SYLWPFRSS+S+SNHGGAGSSEPSNHQMGYSGY
Sbjct: 241 TNDQNRSNSY-SNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGY 299

Query: 301 RYTNSP 307
           RYTNSP
Sbjct: 301 RYTNSP 299

[Close]

BLAST of Spg013087 vs. ExPASy TrEMBL
Match: A0A5A7SIY2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00710 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.4e-157
Identity = 274/306 (89.54%), Postives = 285/306 (93.14%), Query Frame = 0


Query: 1   MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYFGLGHDEDRDHG 60
           MS GRNTHWCYRCRRS+RL GRDAVCPNCN GFIQELDDMVPGNPFD+FGL HDEDRDHG
Sbjct: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  MEAFSAFMSQRLAERNDLRGRLRGRSESLFERGPGFGPLLIFGGQIPLRNSRLEALFNGA 120
           + AFSAFM QRLAERND    +RGRSESLFE  PGFGPLLIFGGQIPLRNSRLEALFNGA
Sbjct: 61  LGAFSAFMRQRLAERND----MRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGA 120

Query: 121 PGIGITRGDSGDYFIGPGLEELFEQLSANGHRGPPPASRSSIDAMPTVKITQRHLRSDSH 180
           PGIGITRGDSGDYFIGPGLEELFE+LSANGHRGPPPASRSSIDAMPTVKIT RHLRSDSH
Sbjct: 121 PGIGITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSH 180

Query: 181 CPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQVIGGGGGGGGHS 240
           CPVCKEKFELGSEARQM CNHMYHSDCIVPWL+QHNSCPVCRQELP Q  G GGGGGGHS
Sbjct: 181 CPVCKEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQ--GIGGGGGGHS 240

Query: 241 TNGQNRSSSYNNNGNGSRVNPGRRNPLSYLWPFRSSNSSSNHGGAGSSEPSNHQMGYSGY 300
           TN QNRS+SY +NG+GSRVNPGRRNP SYLWPFRSS+S+SNHGGAGSSEPSNHQMGYSGY
Sbjct: 241 TNDQNRSNSY-SNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGY 299

Query: 301 RYTNSP 307
           RYTNSP
Sbjct: 301 RYTNSP 299

[Close]

BLAST of Spg013087 vs. ExPASy TrEMBL
Match: A0A6J1DKF0 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111021749 PE=4 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 3.8e-155
Identity = 272/313 (86.90%), Postives = 285/313 (91.05%), Query Frame = 0


Query: 1   MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYFGLGHDEDRDHG 60
           MS+GRNTHWCYRCRRS+ LRGRDAVCPNCN GFIQELDDMVP NPFD+FGL HDEDR  G
Sbjct: 1   MSSGRNTHWCYRCRRSVHLRGRDAVCPNCNGGFIQELDDMVPSNPFDFFGLDHDEDRGQG 60

Query: 61  MEAFSAFMSQRLAERNDLRGRLRGRSESLFERGPGFGPLLIFGGQIPLRNSRLEALFNGA 120
           + AFSAFM QRLAERND    +RGRSES+FER PGFGPLLIFGGQIPLRNSRLEALF+GA
Sbjct: 61  LGAFSAFMRQRLAERND----MRGRSESVFERSPGFGPLLIFGGQIPLRNSRLEALFSGA 120

Query: 121 PGIGITRGDSGDYFIGPGLEELFEQLSANGHRGPPPASRSSIDAMPTVKITQRHLRSDSH 180
           PGIGITRGDSGDYFIGPGLEELFEQLS NG+RGPPPASRSSIDAMPTVKITQRHLRSDSH
Sbjct: 121 PGIGITRGDSGDYFIGPGLEELFEQLSVNGNRGPPPASRSSIDAMPTVKITQRHLRSDSH 180

Query: 181 CPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQVIGGGGG--GGG 240
           CPVCK+KFELGSEARQMPCNHMYHSDCI+PWLVQHNSCPVCRQELPPQ IGGGGG  GGG
Sbjct: 181 CPVCKDKFELGSEARQMPCNHMYHSDCIIPWLVQHNSCPVCRQELPPQGIGGGGGGAGGG 240

Query: 241 HSTNGQNR-SSSYNNNGNGSRVNPGRRNPLSYLWPFRSSNSSSNH----GGAGSSEPSNH 300
           HSTNGQNR SSSYNNN NGSRVNPGRRNP SYLWPFRSSNS SNH    GGAGSSEP NH
Sbjct: 241 HSTNGQNRSSSSYNNNSNGSRVNPGRRNPFSYLWPFRSSNSRSNHSGGGGGAGSSEPMNH 300

Query: 301 QMGYSGYRYTNSP 307
           QM Y G+++TNSP
Sbjct: 301 QMEYPGWQFTNSP 309

[Close]

BLAST of Spg013087 vs. ExPASy TrEMBL
Match: A0A6J1EAP6 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111432344 PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 3.9e-152
Identity = 265/300 (88.33%), Postives = 275/300 (91.67%), Query Frame = 0


Query: 1   MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYFGLGHDEDRDHG 60
           MS+G+NTHWCYRCRRSIRL GRDAVCPNCN GFIQELDDMVPGNPFD+FGL HDEDRDHG
Sbjct: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  MEAFSAFMSQRLAERNDLRGRLRGRSESLFERGPGFGPLLIFGGQIPLRNSRLEALFNGA 120
           + AFSAFM QRLAERND    +RGR+ESLFER PGFGPLLIFGGQIPLRN RLEALFNGA
Sbjct: 61  LGAFSAFMRQRLAERND----MRGRAESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGA 120

Query: 121 PGIGITRGDSGDYFIGPGLEELFEQLSANGHRGPPPASRSSIDAMPTVKITQRHLRSDSH 180
           PGIGITRGD GDYFIGPGLEELFEQLS NGHRGPPPASRS IDAMPTVKITQRHLRSDSH
Sbjct: 121 PGIGITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSH 180

Query: 181 CPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQVIGGGGGGGGHS 240
           CPVCKEKFELGSEARQM CNHMYHSDCIVPWLVQHNSCPVCRQELPPQV+    GG GH+
Sbjct: 181 CPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVM----GGAGHN 240

Query: 241 TNGQNRSSSYNNNGNG-SRVNPGRRNPLSYLWPFRSSNSSSNHGGAGSSEPSNHQMGYSG 300
           TN QNR++SYNNNGNG SRVNPGRRNP SYLWPFRSSNSSSNHGGAGSSE  NHQMGYSG
Sbjct: 241 TNSQNRNNSYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292

[Close]

BLAST of Spg013087 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 323.6 bits (828), Expect = 1.8e-88
Identity = 185/325 (56.92%), Postives = 225/325 (69.23%), Query Frame = 0


Query: 1   MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYF----GLGHDED 60
           MS+ RNTHWC+RC+R++RL G++ VC  C  GF++EL DM   +PFD F    G+   + 
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEEL-DMAQASPFDMFRSHRGVVERDQ 60

Query: 61  RDHGMEAFSAFMSQRLAERNDLRGRLRGRS-ESLFERGPGFGPLLIFGGQIPLR---NSR 120
               M+AFS FM  RLAER+  R  +RGR+  S  E  PG  PLLIFGGQ+P R   ++ 
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDR-EIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNA 120

Query: 121 LEALFN-GAPGIGITRGDSGDYFIGPGLEELFEQLSA-NGHRGPPPASRSSIDAMPTVKI 180
           +EALFN G+PGIGITRG++GDYF GPGLEELFEQLSA    RGPPPA RS+IDA+PT+KI
Sbjct: 121 VEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKI 180

Query: 181 TQRHLR-SDSHCPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQV 240
            QRHLR SDS+CPVCK++FELGSEA+QMPCNH+YHSDCIVPWLVQHNSCPVCRQELP   
Sbjct: 181 AQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS-- 240

Query: 241 IGGGGGGGGHSTNGQNRSSSYNNNGNGSRVNPG-RRNPLSYLWPFRSSNSSS----NHGG 300
             G       +T  +N  SS +++ + SR N   RRNP S  WPFRSS SSS    N GG
Sbjct: 241 ASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGG 300

[Close]

BLAST of Spg013087 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 323.6 bits (828), Expect = 1.8e-88
Identity = 185/325 (56.92%), Postives = 225/325 (69.23%), Query Frame = 0


Query: 1   MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYF----GLGHDED 60
           MS+ RNTHWC+RC+R++RL G++ VC  C  GF++EL DM   +PFD F    G+   + 
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEEL-DMAQASPFDMFRSHRGVVERDQ 60

Query: 61  RDHGMEAFSAFMSQRLAERNDLRGRLRGRS-ESLFERGPGFGPLLIFGGQIPLR---NSR 120
               M+AFS FM  RLAER+  R  +RGR+  S  E  PG  PLLIFGGQ+P R   ++ 
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDR-EIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNA 120

Query: 121 LEALFN-GAPGIGITRGDSGDYFIGPGLEELFEQLSA-NGHRGPPPASRSSIDAMPTVKI 180
           +EALFN G+PGIGITRG++GDYF GPGLEELFEQLSA    RGPPPA RS+IDA+PT+KI
Sbjct: 121 VEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKI 180

Query: 181 TQRHLR-SDSHCPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQV 240
            QRHLR SDS+CPVCK++FELGSEA+QMPCNH+YHSDCIVPWLVQHNSCPVCRQELP   
Sbjct: 181 AQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS-- 240

Query: 241 IGGGGGGGGHSTNGQNRSSSYNNNGNGSRVNPG-RRNPLSYLWPFRSSNSSS----NHGG 300
             G       +T  +N  SS +++ + SR N   RRNP S  WPFRSS SSS    N GG
Sbjct: 241 ASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGG 300

[Close]

BLAST of Spg013087 vs. TAIR 10
Match: AT2G40830.3 (RING-H2 finger C1A )

HSP 1 Score: 323.6 bits (828), Expect = 1.8e-88
Identity = 185/325 (56.92%), Postives = 225/325 (69.23%), Query Frame = 0


Query: 1   MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYF----GLGHDED 60
           MS+ RNTHWC+RC+R++RL G++ VC  C  GF++EL DM   +PFD F    G+   + 
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEEL-DMAQASPFDMFRSHRGVVERDQ 60

Query: 61  RDHGMEAFSAFMSQRLAERNDLRGRLRGRS-ESLFERGPGFGPLLIFGGQIPLR---NSR 120
               M+AFS FM  RLAER+  R  +RGR+  S  E  PG  PLLIFGGQ+P R   ++ 
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDR-EIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNA 120

Query: 121 LEALFN-GAPGIGITRGDSGDYFIGPGLEELFEQLSA-NGHRGPPPASRSSIDAMPTVKI 180
           +EALFN G+PGIGITRG++GDYF GPGLEELFEQLSA    RGPPPA RS+IDA+PT+KI
Sbjct: 121 VEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKI 180

Query: 181 TQRHLR-SDSHCPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQELPPQV 240
            QRHLR SDS+CPVCK++FELGSEA+QMPCNH+YHSDCIVPWLVQHNSCPVCRQELP   
Sbjct: 181 AQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS-- 240

Query: 241 IGGGGGGGGHSTNGQNRSSSYNNNGNGSRVNPG-RRNPLSYLWPFRSSNSSS----NHGG 300
             G       +T  +N  SS +++ + SR N   RRNP S  WPFRSS SSS    N GG
Sbjct: 241 ASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGG 300

[Close]

BLAST of Spg013087 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 293.9 bits (751), Expect = 1.5e-79
Identity = 168/312 (53.85%), Postives = 207/312 (66.35%), Query Frame = 0


Query: 1   MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYFGLGHDEDRDHG 60
           MS+ RNTHWC+RC+R++ LR RDAVC  C  GF++E+ D+ P           D +RD  
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEI-DIGPSRAH------RDVERDPT 60

Query: 61  ---MEAFSAFMSQRLAERN---DLRGRLRGRSESLFERGPGFGPLLIFGGQIPLR----- 120
              MEAFSAFM  RLAER+   ++ GRL       F       PLLIFGGQ P R     
Sbjct: 61  FDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFS---NLAPLLIFGGQAPFRLAGGD 120

Query: 121 NSRLEALFNG-APGIGITRG-DSGDYFIGPGLEELFEQLSA-NGHRGPPPASRSSIDAMP 180
           NS +EA  NG APGIGI RG ++GDYF GPGLEEL EQLS+   HRGPPPA +SSIDA+P
Sbjct: 121 NSSVEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALP 180

Query: 181 TVKITQRHLR-SDSHCPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQEL 240
           T+KITQ+HL+ SDSHCPVCK++FEL SEA+QMPC+H+YHSDCIVPWLVQHNSCPVCR+EL
Sbjct: 181 TIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 240

Query: 241 PPQVIGGGGGGGGHSTNGQNRSSSYNNNGNGSRVNPGRRNPLSYLWPFRSSNSSSNHGGA 298
           P +      G    + + QNRS++        R N  RRN  S LWPFRSS+SSS     
Sbjct: 241 PSR------GSSSSTQSSQNRSTN-------GRENSRRRNIFSNLWPFRSSSSSSTQNRR 289

[Close]

BLAST of Spg013087 vs. TAIR 10
Match: AT3G56580.1 (RING/U-box superfamily protein )

HSP 1 Score: 293.9 bits (751), Expect = 1.5e-79
Identity = 168/312 (53.85%), Postives = 207/312 (66.35%), Query Frame = 0


Query: 1   MSNGRNTHWCYRCRRSIRLRGRDAVCPNCNAGFIQELDDMVPGNPFDYFGLGHDEDRDHG 60
           MS+ RNTHWC+RC+R++ LR RDAVC  C  GF++E+ D+ P           D +RD  
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEI-DIGPSRAH------RDVERDPT 60

Query: 61  ---MEAFSAFMSQRLAERN---DLRGRLRGRSESLFERGPGFGPLLIFGGQIPLR----- 120
              MEAFSAFM  RLAER+   ++ GRL       F       PLLIFGGQ P R     
Sbjct: 61  FDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFS---NLAPLLIFGGQAPFRLAGGD 120

Query: 121 NSRLEALFNG-APGIGITRG-DSGDYFIGPGLEELFEQLSA-NGHRGPPPASRSSIDAMP 180
           NS +EA  NG APGIGI RG ++GDYF GPGLEEL EQLS+   HRGPPPA +SSIDA+P
Sbjct: 121 NSSVEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALP 180

Query: 181 TVKITQRHLR-SDSHCPVCKEKFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRQEL 240
           T+KITQ+HL+ SDSHCPVCK++FEL SEA+QMPC+H+YHSDCIVPWLVQHNSCPVCR+EL
Sbjct: 181 TIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 240

Query: 241 PPQVIGGGGGGGGHSTNGQNRSSSYNNNGNGSRVNPGRRNPLSYLWPFRSSNSSSNHGGA 298
           P +      G    + + QNRS++        R N  RRN  S LWPFRSS+SSS     
Sbjct: 241 PSR------GSSSSTQSSQNRSTN-------GRENSRRRNIFSNLWPFRSSSSSSTQNRR 289

The following BLAST results are available for this feature:

BLAST of Spg013087 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882645.1	2.1e-160	89.10	probable E3 ubiquitin-protein ligase RHC1A [Benincasa hispida] >XP_038882646.1 p...	[more]
XP_004144313.1	2.3e-159	90.52	probable E3 ubiquitin-protein ligase RHC1A [Cucumis sativus] >XP_004144314.1 pro...	[more]
XP_008455755.1	4.9e-157	89.54	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >XP_008455756.1...	[more]
XP_022154478.1	7.8e-155	86.90	probable E3 ubiquitin-protein ligase RHC1A [Momordica charantia]	[more]
XP_023517925.1	3.6e-152	88.67	probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo] >XP_0235...	[more]

BLAST of Spg013087 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22197	2.5e-87	56.92	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q94AK4	2.1e-78	53.85	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
Q8LPN7	9.9e-36	32.08	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
P0CH30	2.7e-33	33.77	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q940T5	3.7e-30	32.53	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]

BLAST of Spg013087 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0T9	1.1e-159	90.52	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_4G419610 PE...	[more]
A0A1S3C178	2.4e-157	89.54	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103495857 PE=4 ...	[more]
A0A5A7SIY2	2.4e-157	89.54	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1DKF0	3.8e-155	86.90	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11102174...	[more]
A0A6J1EAP6	3.9e-152	88.33	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111432344...	[more]

BLAST of Spg013087 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40830.2	1.8e-88	56.92	RING-H2 finger C1A	[more]
AT2G40830.1	1.8e-88	56.92	RING-H2 finger C1A	[more]
AT2G40830.3	1.8e-88	56.92	RING-H2 finger C1A	[more]
AT3G56580.2	1.5e-79	53.85	RING/U-box superfamily protein	[more]
AT3G56580.1	1.5e-79	53.85	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 181..221 e-value: 7.8E-8 score: 42.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 180..222 e-value: 5.2E-11 score: 42.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 181..222 score: 12.297489
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 6..37 e-value: 6.3E-11 score: 42.4
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 144..229 e-value: 9.0E-23 score: 81.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..306
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..306
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 3..291
None	No IPR available	PANTHER	PTHR15710:SF86	E3 UBIQUITIN-PROTEIN LIGASE RHC1A-RELATED	coord: 3..291
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 181..222 e-value: 3.07496E-25 score: 93.5364
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 161..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg013087.1	Spg013087.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0061630	ubiquitin protein ligase activity