Spg013030 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg013030
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Casparian strip membrane protein 1
Location	scaffold1: 11650002 .. 11652303 (-)
RNA-Seq Expression	Spg013030
Synteny	Spg013030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTCATGACTGTTTGTAATTTAGAAAAAAAAATGGTAATAAAAATACAATTTACAGATTATGCAAACCATATAAACAAAACCAAGTTGCAATATGAAATTTGAAAAAGAAAAATAAAATAAAAGATTCTAATCATATTGGATTAGGATTATCTAGCTACTTCCCCAACTCATCTTCCCCATCATGCAAACACTTTCTCTACCTGTTACTGATATTCAAACCAAAAAAAAAACTCTGTTTTTTTGAAACTCAAATGGAGAAGTTAATTTCATCAACAACTCCCTCCACTTCATCTGCTCCAAATTCCTCTCTGTATTTAAATCCCAACTCTCTTCAACATTCCCATCACTCACAATTTCCTTCAATTCTCTGAAAATCTCACACAAATTTCTCTAAACTCCCATCTGGGTTTCTTTGAATTCTCAACAACAAACAGAGGAAATATGAAGAACGCCGAGTCGACAGCCATTGACGTCGCCCCCGAGACCAGCAACAGTGGCCCAATTGCCAAGAAGAAGAGCACCACGCCGCTGCTGGCGGCGTCGCCCCCGCCGGTCCGCCCAGACAGGGGCACCCACCGGACGAAACGTGGGCTTGCGATTTTCGACTTCATTCTGAGACTCGGCGCCCTTGCGGCGGCGGTGGCGGCGGCGGCGGCCATGGGAACCAGTGATCAGACTCTGCCGTTTTTCACTCAGTTCTTCCAGTTCGAGGCTAGCTATGATGATTTGCCCACTTTCCAGTTGGGTTTTTTCTTTTAATTAACTAATTTATTTATTTATTTTTCTATTTTTGTTATTAAGGTCCTGTTTAATAACCCTTTGATTTTGAAATTTAAGTTTTTATCCACATACTTTCACCTATAAATTTATTGGTTTTCGTATCAATCTTCTACTTTATTTTCAAAAACAAGTTCAATTTTGGAAAAAAAAAAGTAGTTTTCAAAATTTTATTTTTGTTTTTAAAATTTGGCTAGGAATTCAAATGCAACCTTAACTAATATGAAAAGCCTTGATAGGGGCCAACGCATAAAAAAGATGTATCGATAACCACGAGATCTGTGGTTCGAGTCTCCCACCCCATATTGTCAAAAAAAAAAAAAAAAAAAAAAACCTTAATATGGAATTTACGAGAAAACAAGCATAATTTTCAAAAATCAAAAACAAAAAATCAAATGGTTATTAGGAATTAAGTTTTTGGGTTTTTTTTTTTTTTAATTGAATTGAATTTGCAGGTTTTTTGTGGTGGCCATGGGAATAGTTGCAGGATATGTGGTATTGTCATTTCCATTCTCAATTGTTTGCATTGTTCGTCCCCATGCTGTTGGACCTCGCCTTCTCTTGTTGATTTTGGACGCTGTAAGTTTTTTTTTTTTTTTTTTTTTTTACTTTTTCTTTTTAAAATTGGAGAGTAATTGGGAAATTTTCTAGTACTCTCGTTCTCGTCCGAGTACTACTTGGCACAATCATATTATAAATTTTTCTATATAAATGATTGTTCAATGTTGTTGGACTTTACTTAAATGATGTTGACCTGAGAAATAATAAATGAGCAAATCATCCCAATAAATAATAGATGAGGAAATGACAGTAATACTTGTATTACGCTATAGTGTAAAAAATTATCCAAATGAAAACGAGTGTCCCTATTATTTCCTGAGAGTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTAGAAGAAGCTAGAAAAAGTTGATCTTTTCTCAATGGTGGATAATAGGAACTTGTTTTTAGAGAAGATTTCTCAATGCTTAGCATAAGGATTGTGTTTTTGGAAATATAGGGTAGATTTCATAAATTAAAAGTAAGTATTTTCCTTGAAATGGAGATTTGAACTCATCTGTGTACCTAATATGGATATTTTGTAAAAATATCATATTTGTATGAATTTTTTTTTTTTTGAAAAATAACTTATAAATTAGTTGATAAAATATACTCACAAGTCACAAATTAGAATGATGCTTTTTACAAAAACAAAAGTAGAAACATCTTTTCCATTTTATCCAATAATAAGTAGCCGACAAGAGTATAATTCAACTGTCATGAAATTACTTGTACTTGCAGGTGGCTCTGACGGTGAACACAGCGGCGGCAGCCGCCGCGGCAGCCGTGGTGTCTATTGCTCACAGCGGCAACTCAAGCACAAACTGGCTGGCAGTTTGCAACCAATTTGGGGACTTTTGCCAGCAGGCGAGTGGCGCTGTGGTGGGGTCTTTTGCTGGTGTGTTGCTGTTCCTTCTGCTCATCTTGTTCTCTGCTCTGTCCCTCAAGAACAGCCATTGA

mRNA sequence

ATGAAGAACGCCGAGTCGACAGCCATTGACGTCGCCCCCGAGACCAGCAACAGTGGCCCAATTGCCAAGAAGAAGAGCACCACGCCGCTGCTGGCGGCGTCGCCCCCGCCGGTCCGCCCAGACAGGGGCACCCACCGGACGAAACGTGGGCTTGCGATTTTCGACTTCATTCTGAGACTCGGCGCCCTTGCGGCGGCGGTGGCGGCGGCGGCGGCCATGGGAACCAGTGATCAGACTCTGCCGTTTTTCACTCAGTTCTTCCAGTTCGAGGCTAGCTATGATGATTTGCCCACTTTCCAGTTTTTTGTGGTGGCCATGGGAATAGTTGCAGGATATGTGGTATTGTCATTTCCATTCTCAATTGTTTGCATTGTTCGTCCCCATGCTGTTGGACCTCGCCTTCTCTTGTTGATTTTGGACGCTGTGGCTCTGACGGTGAACACAGCGGCGGCAGCCGCCGCGGCAGCCGTGGTGTCTATTGCTCACAGCGGCAACTCAAGCACAAACTGGCTGGCAGTTTGCAACCAATTTGGGGACTTTTGCCAGCAGGCGAGTGGCGCTGTGGTGGGGTCTTTTGCTGGTGTGTTGCTGTTCCTTCTGCTCATCTTGTTCTCTGCTCTGTCCCTCAAGAACAGCCATTGA

Coding sequence (CDS)

ATGAAGAACGCCGAGTCGACAGCCATTGACGTCGCCCCCGAGACCAGCAACAGTGGCCCAATTGCCAAGAAGAAGAGCACCACGCCGCTGCTGGCGGCGTCGCCCCCGCCGGTCCGCCCAGACAGGGGCACCCACCGGACGAAACGTGGGCTTGCGATTTTCGACTTCATTCTGAGACTCGGCGCCCTTGCGGCGGCGGTGGCGGCGGCGGCGGCCATGGGAACCAGTGATCAGACTCTGCCGTTTTTCACTCAGTTCTTCCAGTTCGAGGCTAGCTATGATGATTTGCCCACTTTCCAGTTTTTTGTGGTGGCCATGGGAATAGTTGCAGGATATGTGGTATTGTCATTTCCATTCTCAATTGTTTGCATTGTTCGTCCCCATGCTGTTGGACCTCGCCTTCTCTTGTTGATTTTGGACGCTGTGGCTCTGACGGTGAACACAGCGGCGGCAGCCGCCGCGGCAGCCGTGGTGTCTATTGCTCACAGCGGCAACTCAAGCACAAACTGGCTGGCAGTTTGCAACCAATTTGGGGACTTTTGCCAGCAGGCGAGTGGCGCTGTGGTGGGGTCTTTTGCTGGTGTGTTGCTGTTCCTTCTGCTCATCTTGTTCTCTGCTCTGTCCCTCAAGAACAGCCATTGA

Protein sequence

MKNAESTAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRLGALAAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFSIVCIVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDFCQQASGAVVGSFAGVLLFLLLILFSALSLKNSH

Homology

[Close]

BLAST of Spg013030 vs. NCBI nr
Match: XP_022963169.1 (casparian strip membrane protein 1 [Cucurbita moschata] >XP_022972702.1 casparian strip membrane protein 1-like [Cucurbita maxima] >XP_023518955.1 casparian strip membrane protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.9 bits (899), Expect = 7.7e-93
Identity = 186/213 (87.32%), Postives = 204/213 (95.77%), Query Frame = 0


Query: 1   MKNAESTAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRL 60
           MKNAESTAIDVAP+T++SGPIAKKKSTTPLLAA+P PVR DRGTHR KRGLAIFD ILR+
Sbjct: 1   MKNAESTAIDVAPDTNHSGPIAKKKSTTPLLAAAPVPVRSDRGTHRMKRGLAIFDIILRI 60

Query: 61  GALAAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFS 120
           G LAAA+AAAA MGTS++TLPFFTQFFQFEASYDDLPTFQFFV+AMGIVAGYV+LS PFS
Sbjct: 61  GVLAAALAAAATMGTSEETLPFFTQFFQFEASYDDLPTFQFFVIAMGIVAGYVMLSIPFS 120

Query: 121 IVCIVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDF 180
           IVCIVRPHAVG RLLLLILDAVA+T+NTAAA +AAAV++IAH+GNSSTNWLA+CNQFGDF
Sbjct: 121 IVCIVRPHAVGARLLLLILDAVAMTLNTAAAGSAAAVLNIAHAGNSSTNWLAICNQFGDF 180

Query: 181 CQQASGAVVGSFAGVLLFLLLILFSALSLKNSH 214
           CQQASGAVVG+FAGVLLFLLLILFSALSLKNSH
Sbjct: 181 CQQASGAVVGAFAGVLLFLLLILFSALSLKNSH 213

[Close]

BLAST of Spg013030 vs. NCBI nr
Match: KAG6595170.1 (hypothetical protein SDJN03_11723, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 349.7 bits (896), Expect = 1.7e-92
Identity = 185/213 (86.85%), Postives = 204/213 (95.77%), Query Frame = 0


Query: 1   MKNAESTAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRL 60
           MKNAESTAIDVAP+T++SGPIAKKKSTTPLLAA+P PVR DRGTHR KRGLAIFD ILR+
Sbjct: 1   MKNAESTAIDVAPDTNHSGPIAKKKSTTPLLAAAPVPVRSDRGTHRMKRGLAIFDIILRI 60

Query: 61  GALAAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFS 120
           G LAAA+AAAA MGTS++TLPFFTQFFQFEASYDDLPTFQFFV+AMGIVAGYV+LS PFS
Sbjct: 61  GVLAAALAAAATMGTSEETLPFFTQFFQFEASYDDLPTFQFFVIAMGIVAGYVMLSIPFS 120

Query: 121 IVCIVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDF 180
           IVCIVRPHAVG RLLLLILDAVA+T+NTAAA +AAAV++IAH+GNSSTNWLA+CNQFGDF
Sbjct: 121 IVCIVRPHAVGARLLLLILDAVAMTLNTAAAGSAAAVLNIAHAGNSSTNWLAICNQFGDF 180

Query: 181 CQQASGAVVGSFAGVLLFLLLILFSALSLKNSH 214
           CQQASGAVVG+FAGVLLFLLLILFSALSLKN+H
Sbjct: 181 CQQASGAVVGAFAGVLLFLLLILFSALSLKNTH 213

[Close]

BLAST of Spg013030 vs. NCBI nr
Match: XP_038883194.1 (casparian strip membrane protein 1 [Benincasa hispida])

HSP 1 Score: 347.8 bits (891), Expect = 6.5e-92
Identity = 190/213 (89.20%), Postives = 202/213 (94.84%), Query Frame = 0


Query: 1   MKNAESTAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRL 60
           M+N ESTAIDVAPET+NSGPI KKKSTTPLL A+P PV PDRGTHR KRGLAIFDF+LR+
Sbjct: 1   MRNGESTAIDVAPETNNSGPIGKKKSTTPLL-ATPVPV-PDRGTHRMKRGLAIFDFVLRI 60

Query: 61  GALAAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFS 120
           GALA+A+AAAAAMGTS QTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLS PFS
Sbjct: 61  GALASALAAAAAMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSIPFS 120

Query: 121 IVCIVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDF 180
           IVCIVRPHA GPRLLLLILDAVALT+NTAAA AAAAVVS+AHSGNSSTNWL++CNQFGDF
Sbjct: 121 IVCIVRPHAAGPRLLLLILDAVALTLNTAAAGAAAAVVSLAHSGNSSTNWLSICNQFGDF 180

Query: 181 CQQASGAVVGSFAGVLLFLLLILFSALSLKNSH 214
           CQQASGAVVGSFA VLLFLLLILFSALSLK+SH
Sbjct: 181 CQQASGAVVGSFAAVLLFLLLILFSALSLKSSH 211

[Close]

BLAST of Spg013030 vs. NCBI nr
Match: XP_022133169.1 (casparian strip membrane protein 1 [Momordica charantia])

HSP 1 Score: 343.6 bits (880), Expect = 1.2e-90
Identity = 186/210 (88.57%), Postives = 198/210 (94.29%), Query Frame = 0


Query: 2   KNAESTAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRLG 61
           KN+ESTAIDVAPE  NSGPI KKKSTTPLLAA P PVR DRGTHR KRGLAIFDF+LR+G
Sbjct: 3   KNSESTAIDVAPENPNSGPIGKKKSTTPLLAA-PVPVRQDRGTHRMKRGLAIFDFVLRIG 62

Query: 62  ALAAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFSI 121
           ALAAA+AAAAAMGTSD+TLPFFTQFFQFEASYDDLPTFQFFV+AMGIVAGYVVLS PFSI
Sbjct: 63  ALAAALAAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFVIAMGIVAGYVVLSIPFSI 122

Query: 122 VCIVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDFC 181
           VCIVRPHAVGPRLLLLILD+VALT+ T AA AAAAVVS+AHSGNSSTNWLA+CNQFGDFC
Sbjct: 123 VCIVRPHAVGPRLLLLILDSVALTLTTVAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFC 182

Query: 182 QQASGAVVGSFAGVLLFLLLILFSALSLKN 212
           QQASGAV+GSFA VLLFLLLILFSALSLK+
Sbjct: 183 QQASGAVIGSFAAVLLFLLLILFSALSLKH 211

[Close]

BLAST of Spg013030 vs. NCBI nr
Match: XP_008462597.1 (PREDICTED: casparian strip membrane protein 1 [Cucumis melo] >P0DI61.1 RecName: Full=Casparian strip membrane protein 1; Short=CmCASP1 [Cucumis melo] >KAA0025237.1 casparian strip membrane protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 342.4 bits (877), Expect = 2.7e-90
Identity = 185/213 (86.85%), Postives = 199/213 (93.43%), Query Frame = 0


Query: 1   MKNAESTAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRL 60
           MK  ESTAID+APET+NSGPI KKKSTTPLLAA   PV PDRGTHR KRGLAIFDF+LR+
Sbjct: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAA---PV-PDRGTHRMKRGLAIFDFVLRI 60

Query: 61  GALAAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFS 120
           G LA+A+AAAAAMGTS+QTLPFFTQFFQFEASYDDLPTFQFFVVAM +VAGYVVLS PFS
Sbjct: 61  GVLASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFS 120

Query: 121 IVCIVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDF 180
           IVCI+RPHA GPR+LLLILD+VALT+NTAAA AAAAVVS+AHSGNSSTNWLA+CNQFGDF
Sbjct: 121 IVCIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDF 180

Query: 181 CQQASGAVVGSFAGVLLFLLLILFSALSLKNSH 214
           CQQASGAVVGSFA VLLFLLLILFSALSLKNSH
Sbjct: 181 CQQASGAVVGSFAAVLLFLLLILFSALSLKNSH 209

[Close]

BLAST of Spg013030 vs. ExPASy Swiss-Prot
Match: P0DI61 (Casparian strip membrane protein 1 OS=Cucumis melo OX=3656 PE=2 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 3.6e-93
Identity = 185/213 (86.85%), Postives = 199/213 (93.43%), Query Frame = 0


Query: 1   MKNAESTAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRL 60
           MK  ESTAID+APET+NSGPI KKKSTTPLLAA   PV PDRGTHR KRGLAIFDF+LR+
Sbjct: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAA---PV-PDRGTHRMKRGLAIFDFVLRI 60

Query: 61  GALAAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFS 120
           G LA+A+AAAAAMGTS+QTLPFFTQFFQFEASYDDLPTFQFFVVAM +VAGYVVLS PFS
Sbjct: 61  GVLASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFS 120

Query: 121 IVCIVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDF 180
           IVCI+RPHA GPR+LLLILD+VALT+NTAAA AAAAVVS+AHSGNSSTNWLA+CNQFGDF
Sbjct: 121 IVCIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDF 180

Query: 181 CQQASGAVVGSFAGVLLFLLLILFSALSLKNSH 214
           CQQASGAVVGSFA VLLFLLLILFSALSLKNSH
Sbjct: 181 CQQASGAVVGSFAAVLLFLLLILFSALSLKNSH 209

[Close]

BLAST of Spg013030 vs. ExPASy Swiss-Prot
Match: B9HBX2 (Casparian strip membrane protein 1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_763057 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 6.0e-64
Identity = 140/207 (67.63%), Postives = 174/207 (84.06%), Query Frame = 0


Query: 4   AESTAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRLGAL 63
           +ES AID+ PE+S+   +AK K+  PL+A S    R ++G +R  +G+AIFDFILRL A+
Sbjct: 3   SESAAIDI-PESSS---VAKGKA--PLIAVS----RNEKGGYR--KGIAIFDFILRLAAI 62

Query: 64  AAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFSIVC 123
           A A+AAAAAMGTSD+TLPFFTQFFQF+ASYDDLPTFQFFV+A+ IV GY+VLS PFSIV 
Sbjct: 63  ATALAAAAAMGTSDETLPFFTQFFQFQASYDDLPTFQFFVIAIAIVGGYLVLSLPFSIVA 122

Query: 124 IVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDFCQQ 183
           IVRPHAVGPRLLL+ILDAVALT+NTAA AAAAA+V +AH+GNS+TNWLA+C Q+GDFCQ+
Sbjct: 123 IVRPHAVGPRLLLIILDAVALTLNTAAGAAAAAIVYLAHNGNSNTNWLAICQQYGDFCQK 182

Query: 184 ASGAVVGSFAGVLLFLLLILFSALSLK 211
            SGAVV SF  V++F+ LI+ SA +L+
Sbjct: 183 VSGAVVASFITVVIFVFLIVLSAFALR 197

[Close]

BLAST of Spg013030 vs. ExPASy Swiss-Prot
Match: B9IIR5 (Casparian strip membrane protein 2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_576556 PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 8.7e-63
Identity = 138/205 (67.32%), Postives = 167/205 (81.46%), Query Frame = 0


Query: 6   STAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRLGALAA 65
           ST ID+ PE+S     +  K T PL+AA   P++   G    K+G+AIFDFILRL A+A 
Sbjct: 5   STEIDM-PESS-----SVSKGTAPLIAA---PMKEKGG---YKKGIAIFDFILRLAAIAT 64

Query: 66  AVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFSIVCIV 125
           A+AAAA+MGTSD+TLPFFTQFFQF+ASYDDLPTFQFFV+AM IVAGY+VLS PFSIV IV
Sbjct: 65  ALAAAASMGTSDETLPFFTQFFQFQASYDDLPTFQFFVIAMAIVAGYLVLSLPFSIVAIV 124

Query: 126 RPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDFCQQAS 185
           RPHA GPRLLL+ILD VALT+NTAA AAAAA+V +AH+GNSSTNWLA+C QFGDFCQ+ S
Sbjct: 125 RPHAAGPRLLLIILDTVALTLNTAAGAAAAAIVYLAHNGNSSTNWLAICQQFGDFCQKNS 184

Query: 186 GAVVGSFAGVLLFLLLILFSALSLK 211
           GAVV SF  V++F+ L++ SA +L+
Sbjct: 185 GAVVASFITVVIFVFLLVLSAFALR 197

[Close]

BLAST of Spg013030 vs. ExPASy Swiss-Prot
Match: B9SX12 (Casparian strip membrane protein 1 OS=Ricinus communis OX=3988 GN=RCOM_1259250 PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.1e-61
Identity = 133/205 (64.88%), Postives = 159/205 (77.56%), Query Frame = 0


Query: 6   STAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRLGALAA 65
           ST I++  E+S     A  K   PL+ AS        G    K+G+AIFDFILRLGA+ +
Sbjct: 2   STTIEIPAESS-----AVAKGKAPLIGASSSSYEKKGG---YKKGIAIFDFILRLGAVIS 61

Query: 66  AVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFSIVCIV 125
           A++AAA MGTSD+TLPFFTQFFQFEA YDD PTFQFFV+AMG V GY+VLS PFS+V I+
Sbjct: 62  ALSAAATMGTSDETLPFFTQFFQFEAGYDDFPTFQFFVIAMGFVGGYLVLSLPFSVVAII 121

Query: 126 RPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDFCQQAS 185
           RPHAVG RLLLLILD VALT+NTAAAAAAAA+V +AH+GN S NWLAVC QFGDFCQ+ S
Sbjct: 122 RPHAVGIRLLLLILDTVALTLNTAAAAAAAAIVYLAHNGNQSANWLAVCQQFGDFCQKVS 181

Query: 186 GAVVGSFAGVLLFLLLILFSALSLK 211
           G VV SF  VL+FLLL++ SA++L+
Sbjct: 182 GGVVASFVSVLVFLLLVVMSAVALR 198

[Close]

BLAST of Spg013030 vs. ExPASy Swiss-Prot
Match: B9IIR4 (Casparian strip membrane protein 3 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_907513 PE=3 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 6.2e-61
Identity = 138/210 (65.71%), Postives = 163/210 (77.62%), Query Frame = 0


Query: 6   STAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTH---RTKRGLAIFDFILRLGA 65
           S  +D+  +TS     A  K T PL+AAS         TH     K+GLAIFD +LRLGA
Sbjct: 2   SARVDIPADTS-----AAAKGTAPLIAAS---------THVKGGYKKGLAIFDLVLRLGA 61

Query: 66  LAAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFSIV 125
           +  A+AAAA MGT+DQTLPFFTQFFQF+ASYDDLPTFQFFV+AM IV+GY+VLS PFSIV
Sbjct: 62  VVTALAAAATMGTTDQTLPFFTQFFQFQASYDDLPTFQFFVIAMAIVSGYLVLSLPFSIV 121

Query: 126 CIVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDFCQ 185
            I+RPHA GPRLLL+ILD VALT+NTAAAAAA A+V +A +GNSS NWL +C QFGDFCQ
Sbjct: 122 AIIRPHATGPRLLLIILDTVALTLNTAAAAAAVAIVDLAQNGNSSANWLGICQQFGDFCQ 181

Query: 186 QASGAVVGSF--AGVLLFLLLILFSALSLK 211
           +ASGAVV SF  AGVLLFL++I  SAL+L+
Sbjct: 182 KASGAVVASFIAAGVLLFLIVI--SALALR 195

[Close]

BLAST of Spg013030 vs. ExPASy TrEMBL
Match: A0A6J1I5K5 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111471224 PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.7e-93
Identity = 186/213 (87.32%), Postives = 204/213 (95.77%), Query Frame = 0


Query: 1   MKNAESTAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRL 60
           MKNAESTAIDVAP+T++SGPIAKKKSTTPLLAA+P PVR DRGTHR KRGLAIFD ILR+
Sbjct: 1   MKNAESTAIDVAPDTNHSGPIAKKKSTTPLLAAAPVPVRSDRGTHRMKRGLAIFDIILRI 60

Query: 61  GALAAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFS 120
           G LAAA+AAAA MGTS++TLPFFTQFFQFEASYDDLPTFQFFV+AMGIVAGYV+LS PFS
Sbjct: 61  GVLAAALAAAATMGTSEETLPFFTQFFQFEASYDDLPTFQFFVIAMGIVAGYVMLSIPFS 120

Query: 121 IVCIVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDF 180
           IVCIVRPHAVG RLLLLILDAVA+T+NTAAA +AAAV++IAH+GNSSTNWLA+CNQFGDF
Sbjct: 121 IVCIVRPHAVGARLLLLILDAVAMTLNTAAAGSAAAVLNIAHAGNSSTNWLAICNQFGDF 180

Query: 181 CQQASGAVVGSFAGVLLFLLLILFSALSLKNSH 214
           CQQASGAVVG+FAGVLLFLLLILFSALSLKNSH
Sbjct: 181 CQQASGAVVGAFAGVLLFLLLILFSALSLKNSH 213

[Close]

BLAST of Spg013030 vs. ExPASy TrEMBL
Match: A0A6J1HJA9 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463456 PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.7e-93
Identity = 186/213 (87.32%), Postives = 204/213 (95.77%), Query Frame = 0


Query: 1   MKNAESTAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRL 60
           MKNAESTAIDVAP+T++SGPIAKKKSTTPLLAA+P PVR DRGTHR KRGLAIFD ILR+
Sbjct: 1   MKNAESTAIDVAPDTNHSGPIAKKKSTTPLLAAAPVPVRSDRGTHRMKRGLAIFDIILRI 60

Query: 61  GALAAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFS 120
           G LAAA+AAAA MGTS++TLPFFTQFFQFEASYDDLPTFQFFV+AMGIVAGYV+LS PFS
Sbjct: 61  GVLAAALAAAATMGTSEETLPFFTQFFQFEASYDDLPTFQFFVIAMGIVAGYVMLSIPFS 120

Query: 121 IVCIVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDF 180
           IVCIVRPHAVG RLLLLILDAVA+T+NTAAA +AAAV++IAH+GNSSTNWLA+CNQFGDF
Sbjct: 121 IVCIVRPHAVGARLLLLILDAVAMTLNTAAAGSAAAVLNIAHAGNSSTNWLAICNQFGDF 180

Query: 181 CQQASGAVVGSFAGVLLFLLLILFSALSLKNSH 214
           CQQASGAVVG+FAGVLLFLLLILFSALSLKNSH
Sbjct: 181 CQQASGAVVGAFAGVLLFLLLILFSALSLKNSH 213

[Close]

BLAST of Spg013030 vs. ExPASy TrEMBL
Match: A0A6J1BV79 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111005840 PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 6.0e-91
Identity = 186/210 (88.57%), Postives = 198/210 (94.29%), Query Frame = 0


Query: 2   KNAESTAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRLG 61
           KN+ESTAIDVAPE  NSGPI KKKSTTPLLAA P PVR DRGTHR KRGLAIFDF+LR+G
Sbjct: 3   KNSESTAIDVAPENPNSGPIGKKKSTTPLLAA-PVPVRQDRGTHRMKRGLAIFDFVLRIG 62

Query: 62  ALAAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFSI 121
           ALAAA+AAAAAMGTSD+TLPFFTQFFQFEASYDDLPTFQFFV+AMGIVAGYVVLS PFSI
Sbjct: 63  ALAAALAAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFVIAMGIVAGYVVLSIPFSI 122

Query: 122 VCIVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDFC 181
           VCIVRPHAVGPRLLLLILD+VALT+ T AA AAAAVVS+AHSGNSSTNWLA+CNQFGDFC
Sbjct: 123 VCIVRPHAVGPRLLLLILDSVALTLTTVAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFC 182

Query: 182 QQASGAVVGSFAGVLLFLLLILFSALSLKN 212
           QQASGAV+GSFA VLLFLLLILFSALSLK+
Sbjct: 183 QQASGAVIGSFAAVLLFLLLILFSALSLKH 211

[Close]

BLAST of Spg013030 vs. ExPASy TrEMBL
Match: A0A5A7SKE2 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00860 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.3e-90
Identity = 185/213 (86.85%), Postives = 199/213 (93.43%), Query Frame = 0


Query: 1   MKNAESTAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRL 60
           MK  ESTAID+APET+NSGPI KKKSTTPLLAA   PV PDRGTHR KRGLAIFDF+LR+
Sbjct: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAA---PV-PDRGTHRMKRGLAIFDFVLRI 60

Query: 61  GALAAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFS 120
           G LA+A+AAAAAMGTS+QTLPFFTQFFQFEASYDDLPTFQFFVVAM +VAGYVVLS PFS
Sbjct: 61  GVLASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFS 120

Query: 121 IVCIVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDF 180
           IVCI+RPHA GPR+LLLILD+VALT+NTAAA AAAAVVS+AHSGNSSTNWLA+CNQFGDF
Sbjct: 121 IVCIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDF 180

Query: 181 CQQASGAVVGSFAGVLLFLLLILFSALSLKNSH 214
           CQQASGAVVGSFA VLLFLLLILFSALSLKNSH
Sbjct: 181 CQQASGAVVGSFAAVLLFLLLILFSALSLKNSH 209

[Close]

BLAST of Spg013030 vs. ExPASy TrEMBL
Match: A0A1S3CHB9 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500916 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.3e-90
Identity = 185/213 (86.85%), Postives = 199/213 (93.43%), Query Frame = 0


Query: 1   MKNAESTAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRL 60
           MK  ESTAID+APET+NSGPI KKKSTTPLLAA   PV PDRGTHR KRGLAIFDF+LR+
Sbjct: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAA---PV-PDRGTHRMKRGLAIFDFVLRI 60

Query: 61  GALAAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFS 120
           G LA+A+AAAAAMGTS+QTLPFFTQFFQFEASYDDLPTFQFFVVAM +VAGYVVLS PFS
Sbjct: 61  GVLASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFS 120

Query: 121 IVCIVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDF 180
           IVCI+RPHA GPR+LLLILD+VALT+NTAAA AAAAVVS+AHSGNSSTNWLA+CNQFGDF
Sbjct: 121 IVCIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDF 180

Query: 181 CQQASGAVVGSFAGVLLFLLLILFSALSLKNSH 214
           CQQASGAVVGSFA VLLFLLLILFSALSLKNSH
Sbjct: 181 CQQASGAVVGSFAAVLLFLLLILFSALSLKNSH 209

[Close]

BLAST of Spg013030 vs. TAIR 10
Match: AT5G06200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 224.2 bits (570), Expect = 1.0e-58
Identity = 128/207 (61.84%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 4   AESTAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRLGAL 63
           ++S A+DV  E+S+   + K K+  PLL  +    R   G+   KRGL+IFDF+LRL A+
Sbjct: 3   SDSIAVDVPAESSS---VIKGKA--PLLGLA----RDHTGSGGYKRGLSIFDFLLRLAAI 62

Query: 64  AAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFSIVC 123
            AA+AAAA MGTSD+TLPFFTQF QFEASYDDLPTFQFFVVA+ IVAGY+VLS PFS+V 
Sbjct: 63  VAALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVVAIAIVAGYLVLSLPFSVVT 122

Query: 124 IVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDFCQQ 183
           IVRP AV PRLLLL+LD  AL ++TAAA+AAAA+V +AH+GN++TNWL +C QFGDFCQ+
Sbjct: 123 IVRPLAVAPRLLLLVLDTAALALDTAAASAAAAIVYLAHNGNTNTNWLPICQQFGDFCQK 182

Query: 184 ASGAVVGSFAGVLLFLLLILFSALSLK 211
            SGAVV +FA V    +L++ S +SLK
Sbjct: 183 TSGAVVSAFASVTFLAILVVISGVSLK 200

[Close]

BLAST of Spg013030 vs. TAIR 10
Match: AT3G11550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 216.1 bits (549), Expect = 2.8e-56
Identity = 123/210 (58.57%), Postives = 155/210 (73.81%), Query Frame = 0


Query: 1   MKNAESTAIDVAPETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRL 60
           MKN EST IDV  E+S++      K   PL+  +        G +   RGLAIFDF+LRL
Sbjct: 1   MKN-ESTFIDVPAESSSA-----MKGKAPLIGVARDHTTSGSGGY--NRGLAIFDFLLRL 60

Query: 61  GALAAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFS 120
            A+ AA+AAAA MGTSD+TLPFFTQF QFEASYDDLPTFQFFV+AM +V GY+VLS P S
Sbjct: 61  AAIVAALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVIAMALVGGYLVLSLPIS 120

Query: 121 IVCIVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDF 180
           +V I+RP A  PRLLLL+LD   L +NTAAA++AAA+  +AHSGN +TNWL +C QFGDF
Sbjct: 121 VVTILRPLATAPRLLLLVLDTGVLALNTAAASSAAAISYLAHSGNQNTNWLPICQQFGDF 180

Query: 181 CQQASGAVVGSFAGVLLFLLLILFSALSLK 211
           CQ++SGAVV +F  V+ F +L++ S ++LK
Sbjct: 181 CQKSSGAVVSAFVSVVFFTILVVISGVALK 202

[Close]

BLAST of Spg013030 vs. TAIR 10
Match: AT2G36100.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-51
Identity = 114/209 (54.55%), Postives = 148/209 (70.81%), Query Frame = 0


Query: 5   ESTAIDV---APETSNSGPIAKKKSTTPLLAASPPPVRPDRGTHRTKRGLAIFDFILRLG 64
           EST IDV   +  T +S  + K       +A +       RG    KRGLAIFDF+LRL 
Sbjct: 4   ESTTIDVGEPSTVTKSSSHVVKDAKKKGFVAVA------SRG--GAKRGLAIFDFLLRLA 63

Query: 65  ALAAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGIVAGYVVLSFPFSI 124
           A+A  + AA+ M T+++TLPFFTQF QF+A YDDLP FQ+FV+A+ +VA Y+VLS PFSI
Sbjct: 64  AIAVTIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIAVAVVASYLVLSLPFSI 123

Query: 125 VCIVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSSTNWLAVCNQFGDFC 184
           V IVRPHAV PRL+LLI D + +T+NT+AAAAAA++  +AH+GN STNWL +C QFGDFC
Sbjct: 124 VSIVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQSTNWLPICQQFGDFC 183

Query: 185 QQASGAVVGSFAGVLLFLLLILFSALSLK 211
           Q  S AVV     +L F++LI+ SA++LK
Sbjct: 184 QNVSTAVVADSIAILFFIVLIIISAIALK 204

[Close]

BLAST of Spg013030 vs. TAIR 10
Match: AT2G27370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 181.4 bits (459), Expect = 7.5e-46
Identity = 97/165 (58.79%), Postives = 122/165 (73.94%), Query Frame = 0


Query: 48  KRGLAIFDFILRLGALAAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMG 107
           KRG+AIFDF+LRL A   A+AAAA M T+++TLPFFTQF QF+A Y DLPT   FV+   
Sbjct: 56  KRGVAIFDFVLRLIAAITAMAAAAKMATTEETLPFFTQFLQFQADYTDLPTMSSFVIVNS 115

Query: 108 IVAGYVVLSFPFSIVCIVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSS 167
           IV GY+ LS PFSIVCI+RP AV PRL L++ D V + +   AA+A+AA+V +AH+GNSS
Sbjct: 116 IVGGYLTLSLPFSIVCILRPLAVPPRLFLILCDTVMMGLTLMAASASAAIVYLAHNGNSS 175

Query: 168 TNWLAVCNQFGDFCQQASGAVVGSFAGVLLFLLLILFSALSLKNS 213
           +NWL VC QFGDFCQ  SGAVV SF    L + L++ SA +LK +
Sbjct: 176 SNWLPVCQQFGDFCQGTSGAVVASFIAATLLMFLVILSAFALKRT 220

[Close]

BLAST of Spg013030 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 151.8 bits (382), Expect = 6.4e-37
Identity = 79/165 (47.88%), Postives = 116/165 (70.30%), Query Frame = 0


Query: 49  RGLAIFDFILRLGALAAAVAAAAAMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMGI 108
           R +AI +FILR+ A    + +A  MGT+ +TLPFFTQF +F+A Y+DLP   FFVVA  +
Sbjct: 23  RRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVANAV 82

Query: 109 VAGYVVLSFPFSIVCIVRPHAVGPRLLLLILDAVALTVNTAAAAAAAAVVSIAHSGNSST 168
           V+GY++LS   + V IV+      R+LL+ILD   L + T+ A++AAA+V +AH+GN+ T
Sbjct: 83  VSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLAHNGNNKT 142

Query: 169 NWLAVCNQFGDFCQQASGAVVGSFAGVLLFLLLILFSALSLKNSH 214
           NW A+C QF  FC++ SG+++GSF  ++L +LLIL SA++L   H
Sbjct: 143 NWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIALSRRH 187

The following BLAST results are available for this feature:

BLAST of Spg013030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963169.1	7.7e-93	87.32	casparian strip membrane protein 1 [Cucurbita moschata] >XP_022972702.1 casparia...	[more]
KAG6595170.1	1.7e-92	86.85	hypothetical protein SDJN03_11723, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038883194.1	6.5e-92	89.20	casparian strip membrane protein 1 [Benincasa hispida]	[more]
XP_022133169.1	1.2e-90	88.57	casparian strip membrane protein 1 [Momordica charantia]	[more]
XP_008462597.1	2.7e-90	86.85	PREDICTED: casparian strip membrane protein 1 [Cucumis melo] >P0DI61.1 RecName: ...	[more]

BLAST of Spg013030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DI61	3.6e-93	86.85	Casparian strip membrane protein 1 OS=Cucumis melo OX=3656 PE=2 SV=1	[more]
B9HBX2	6.0e-64	67.63	Casparian strip membrane protein 1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_...	[more]
B9IIR5	8.7e-63	67.32	Casparian strip membrane protein 2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_...	[more]
B9SX12	2.1e-61	64.88	Casparian strip membrane protein 1 OS=Ricinus communis OX=3988 GN=RCOM_1259250 P...	[more]
B9IIR4	6.2e-61	65.71	Casparian strip membrane protein 3 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_...	[more]

BLAST of Spg013030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I5K5	3.7e-93	87.32	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111471224 PE=3 SV=1	[more]
A0A6J1HJA9	3.7e-93	87.32	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463456 PE=3 SV=1	[more]
A0A6J1BV79	6.0e-91	88.57	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111005840 PE=3 SV=1	[more]
A0A5A7SKE2	1.3e-90	86.85	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00...	[more]
A0A1S3CHB9	1.3e-90	86.85	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500916 PE=3 SV=1	[more]

BLAST of Spg013030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06200.1	1.0e-58	61.84	Uncharacterised protein family (UPF0497)	[more]
AT3G11550.1	2.8e-56	58.57	Uncharacterised protein family (UPF0497)	[more]
AT2G36100.1	1.2e-51	54.55	Uncharacterised protein family (UPF0497)	[more]
AT2G27370.1	7.5e-46	58.79	Uncharacterised protein family (UPF0497)	[more]
AT5G15290.1	6.4e-37	47.88	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 209..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 19..212
None	No IPR available	PANTHER	PTHR11615:SF281	CASPARIAN STRIP MEMBRANE PROTEIN 3	coord: 19..212
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 49..196 e-value: 8.6E-44 score: 149.0
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 56..208 e-value: 1.1E-39 score: 133.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg013030.1	Spg013030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007043	cell-cell junction assembly
biological_process	GO:0042545	cell wall modification
cellular_component	GO:0048226	Casparian strip
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding