Spg012976 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg012976
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Translation initiation factor IF-2, putative isoform 1
Location	scaffold1: 6451589 .. 6454731 (-)
RNA-Seq Expression	Spg012976
Synteny	Spg012976

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCAAACTAATCTCTTTTCCCCCGCCCAATCTTTCACACATCTGAACATTGCTCCTCCGCCGGAGCTGAAAAGGAGGACGACGACGAATTCGCGGCAGTTCACCGGCGTAGTTTAATTCATATATTCCCGTCTCTGGTGGTTAGGTTTCGTCAAGTTTTGGAAATCAATAGGTAGAAATTCAGGTTGTTGACTTTAATTTGTGTTTATTTATGCCCATTACCACTGCGAACTTCAATTAATGTCACTATGCACTATATCTAGGGTTTTGAAAGTCTCTATATTGTTTTCATTTATGAAAATCCCGCGACAGAGTGCAGATTTGTTTCAGAATGCTTCAACGTTGAGTAGTCCAGTAGAGTCAAGAGAGACTTGTTGCTGAACATGGCAAGGCGAAAGGCGAAGAAAACTGTTAAGAAGTCAAGCCCTTCACCTGGGGAAAAAGCGAAGGATGAAGCAGAAAATAAGTTAAAAAATGAGGAGCAAGCACCTTTGGTGTCCGACGAGGATGGTATGGTGACATTCGTATTGGTTTGGATCCTTTTTCTGGAATCTGGAACTTAATTTTAGGATTGAAAACCATTTCGTTTCTCTTCCAGTGATCAATTGTCCAAGGATTTAACATAATTGTTCGGCTGCTTTTGCCTTCATTTGTATAGTTGAACGGCATGCTGCTGCAATTCGTGCCATTCGGGATGTGGAGATCGAGCGTTTGATTACTGAACTGCGGTTGCTTCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTCTATTGCAATTTTTCGAGGAAAATCTTCCAAACTTGTCCATTTTGAGAGGTGAACAGGGAGAAATTGAAGTACAATGGAAGGATACAGAGGGTGAATTACACAACAATCTAGCTGATGGAATAGATATACATGCTTCTCTGCTGCATCGCCTGTCCATAGCTTATCCTAACTGCTCTGCCGGAATGCGATCTTTAAATGGATTTGAATTTTCCAGTAAATCAGGTAACTGCAGATTCAGGATTCTGTTGCATAAAACTATTTGGTAAGTGCTCGTTTATGTGATGTTTGTTTGCTGAATTCAGCATATTTTCTCTCTATTGGTGGCAGTGAAAACAAATCCTTTCAATGTTGAGAACCTGCAAATTCCGAGTTTAGTAAGTAACTTTAAATTTGATATCTTATATTGTTAACTACAAATTCTTATCTTTAGAACAATAGAAAGAATGATACATAGCGAGCTCAAAAAATATGTCTTAGTTGGTCTGTATCTCGTGTTGTTGATTTGGTGAAGAATGCCTTCATTGTCTTCACGAGAAATAGAAGCGTGTACTGAATCTTTATTCATGAGAAGATGCTTTGGTATTGACTGTTATATTTACCGACAATTCTTAGGTTTTGGAGGAGCCCTCAGATAGTATGATGCTCGGAATGCCAGACATTCTTCAAACTCCTGGGGTTAGTACCTTCGTGGTTGTTGCTCGCAGCTCATTGCATTAGCCTTTTCTTGTTAATAACTTAGTTGTCTATTATTGGCAATTTCCAGTATTTGGTATATAGTGTTGTTGACTCAAATTTTTAGGTACATAGTGGTGGTTGGGGTCAAAGGCACAAAATTACTGTAGTGGTAGCGCGTGTTATCCATTATTGATCTTTCTTTCAAATAATTGTGGGTGTCTATGGTAACTTATGTGTATATAAATCCATCCAGTAGACAACTATCTAGATTTTATTAGCTCCATATTGAGCTTCACTAAGATTGGGTATTTAATGTCCTGGTCATAAGTTGGAATGCAGTTTAGGGAAATGAAGTTTGATAGATACTATTTGAAAATACTAGTTCATGGAAGGTTGCTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGTCCTCTCTCTCTTCTTCTTCTTTTAGTGGTTCATTTTGGCTTTGATTCTTTTCTAATCTGACTCCTTAGTGGAAGTGTTTCAATGGATGTCAATACCATTATAAATTGGTAAACATTGTCCATATTTGTACGTGTGCTATTGATCAAAGTACTAGAAGTGAACAGTTATTGAAGGCTAAGTTGCACAATTTTTTTGACAACGATGGTTGTTTTTTTGTTTTACGTGGATGATGATTTGAACCTTTGACTTTTTGGTCGATGATAATACCTTAACAAGTTTAGATATATTCAAGTTAACATTGATTATTTCTCATTAAAAGTATTTTGGCACGTATTAAATAATGAGTGATGATCTCATTTCAAGTTATTATTAATATTTTTAGATAAGAAACAATTCTATTCATGGAATGAAAATAGAAAAAATGAGGGAAAATCTTGACCCATGGAAGGAAGGTGCAAAAATGAATTTCAATGAGTTTAAAGATTAGCAAGGCCATGACTAGAAAACAATTGTGAAGTTTACACTTAGTAAGGTCTCAGGCTTGTTTGAGGAATTGTTTCAAACAAAGTTCGCTATCTTTTCAGAAAAAGATCGAGTAACATGAGTAACCTGTTTACATAATTGTTTATTGAGTCTATTTTTGCTTTTATTTAATGTATTCTACAATAAGCTAACTATTTATTGTTCCATAGGTAAGTAACCAAAGATTGTCAATTGGGATGACACCGAAAACCCGACGGCTGCCGAAGCCCGGCGAGATGCTTGTGTCTATCCACGGATCCCCCCTTGGTGTTTACAAGGAAGACAACATGGAAGCAATACATGGTAGGCACATTTAGTTCATATGCAGACAATGGAGTGTTTTGATGCTTTAAATTTGGAAAAGTGAATATGTAGGCCAAATAAGTTGGTGGGTATACATATTTTTCATGCTTCTACATGTTTCTCATAGATAAATTAATGTGCAGAATCAGAAGAGGGTTGATTAGCTGTCTCAAGGCCACTTGACACTTCGTCAAATGTAAAACTTCAAATGGGATGATCATGACCATCGTACCTGTTCTATCAACCTTCTTGTATTGTATCTAACATTTTGATTACTACTTATTAAGAGCTACTCTTACATGTGTATAACTAAGAAATAGTGTAACTTTACTCGAAGAAACGAGTATGTACAAACGCACAATAGTTCCACTCAATTATTGTGCATGATAATTTGTTTTCAAAGTTGATGTTGATGTTTATCAAAGGCCAGTCACAAGCTGCA

mRNA sequence

ATGGCAAGGCGAAAGGCGAAGAAAACTGTTAAGAAGTCAAGCCCTTCACCTGGGGAAAAAGCGAAGGATGAAGCAGAAAATAAGTTAAAAAATGAGGAGCAAGCACCTTTGGTGTCCGACGAGGATGTTGAACGGCATGCTGCTGCAATTCGTGCCATTCGGGATGTGGAGATCGAGCGTTTGATTACTGAACTGCGGTTGCTTCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTCTATTGCAATTTTTCGAGGAAAATCTTCCAAACTTGTCCATTTTGAGAGGTGAACAGGGAGAAATTGAAGTACAATGGAAGGATACAGAGGGTGAATTACACAACAATCTAGCTGATGGAATAGATATACATGCTTCTCTGCTGCATCGCCTGTCCATAGCTTATCCTAACTGCTCTGCCGGAATGCGATCTTTAAATGGATTTGAATTTTCCAGTAAATCAGTGAAAACAAATCCTTTCAATGTTGAGAACCTGCAAATTCCGAGTTTAGTTTTGGAGGAGCCCTCAGATAGTATGATGCTCGGAATGCCAGACATTCTTCAAACTCCTGGGGTAAGTAACCAAAGATTGTCAATTGGGATGACACCGAAAACCCGACGGCTGCCGAAGCCCGGCGAGATGCTTGTGTCTATCCACGGATCCCCCCTTGGTGTTTACAAGGAAGACAACATGGAAGCAATACATGAATCAGAAGAGGGTTGA

Coding sequence (CDS)

ATGGCAAGGCGAAAGGCGAAGAAAACTGTTAAGAAGTCAAGCCCTTCACCTGGGGAAAAAGCGAAGGATGAAGCAGAAAATAAGTTAAAAAATGAGGAGCAAGCACCTTTGGTGTCCGACGAGGATGTTGAACGGCATGCTGCTGCAATTCGTGCCATTCGGGATGTGGAGATCGAGCGTTTGATTACTGAACTGCGGTTGCTTCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTCTATTGCAATTTTTCGAGGAAAATCTTCCAAACTTGTCCATTTTGAGAGGTGAACAGGGAGAAATTGAAGTACAATGGAAGGATACAGAGGGTGAATTACACAACAATCTAGCTGATGGAATAGATATACATGCTTCTCTGCTGCATCGCCTGTCCATAGCTTATCCTAACTGCTCTGCCGGAATGCGATCTTTAAATGGATTTGAATTTTCCAGTAAATCAGTGAAAACAAATCCTTTCAATGTTGAGAACCTGCAAATTCCGAGTTTAGTTTTGGAGGAGCCCTCAGATAGTATGATGCTCGGAATGCCAGACATTCTTCAAACTCCTGGGGTAAGTAACCAAAGATTGTCAATTGGGATGACACCGAAAACCCGACGGCTGCCGAAGCCCGGCGAGATGCTTGTGTCTATCCACGGATCCCCCCTTGGTGTTTACAAGGAAGACAACATGGAAGCAATACATGAATCAGAAGAGGGTTGA

Protein sequence

MARRKAKKTVKKSSPSPGEKAKDEAENKLKNEEQAPLVSDEDVERHAAAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEENLPNLSILRGEQGEIEVQWKDTEGELHNNLADGIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSMMLGMPDILQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG

Homology

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BLAST of Spg012976 vs. NCBI nr
Match: KAG6594850.1 (hypothetical protein SDJN03_11403, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 404.4 bits (1038), Expect = 6.6e-109
Identity = 217/241 (90.04%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPGEKAKDEAENKLKNEEQAPLVSDEDVERHAAAIRAIRDVEIER 60
           MARRKAKKTVK SSPSP EKAKDEAEN+LK+EEQAPLVSDEDVERHAAAIRAIRDVEIER
Sbjct: 1   MARRKAKKTVKNSSPSPREKAKDEAENELKSEEQAPLVSDEDVERHAAAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEENLPNLSIL-RGEQGEIEVQWKDTEGELHNNLAD 120
           LITELRLLRSYFNKEQLQTPLLQFF+E LPNLSI  +GE GEIEVQWK+TE EL  N  D
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLE-EPSDS 180
           G+D+HASLLHRLSIAYPN SAGMRSLNGFEFSSKSVKTNPFNVE+LQIPSLVLE EPSDS
Sbjct: 121 GMDVHASLLHRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDS 180

Query: 181 MMLGMPDILQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESE 240
           MMLGM DILQTPGVSNQRLSIGMTP+TRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHES+
Sbjct: 181 MMLGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESD 240

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BLAST of Spg012976 vs. NCBI nr
Match: KAG6604007.1 (hypothetical protein SDJN03_04616, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 404.4 bits (1038), Expect = 6.6e-109
Identity = 212/241 (87.97%), Postives = 225/241 (93.36%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPGEKAKDEAENKLKNEEQAPLVSDEDVERHAAAIRAIRDVEIER 60
           MARRKAKK+VKKSSPSP  +AKD + N+LK+E+QA LVSDEDVERHA AIRAIRDVEIER
Sbjct: 1   MARRKAKKSVKKSSPSPIREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQGEIEVQWKDTEGELHNNLAD 120
           LITELRLLRSYFNKEQLQTPLLQFFEE LP+LSI  RGEQGEIEVQWKDTE ELH N AD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSM 180
           GIDIHASLLHRLS AYPNCSAGMRS NGFEFSSKSVKTNPFNVENLQIP+  LEEPSD+M
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180

Query: 181 MLGMPDILQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE 240
           +LGMPD+LQTPGVSNQRLSIGMTPKTRRLPKPGE+LVSIHGSPLGVY+EDNMEAIHESEE
Sbjct: 181 VLGMPDLLQTPGVSNQRLSIGMTPKTRRLPKPGEVLVSIHGSPLGVYREDNMEAIHESEE 240

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BLAST of Spg012976 vs. NCBI nr
Match: XP_023543921.1 (uncharacterized protein LOC111803645 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 401.4 bits (1030), Expect = 5.6e-108
Identity = 210/241 (87.14%), Postives = 225/241 (93.36%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPGEKAKDEAENKLKNEEQAPLVSDEDVERHAAAIRAIRDVEIER 60
           MARRKAKK+VKKSSPSP  +AKD + N+LK+E+QA LVSDEDVERHA AIRAIRDVEIER
Sbjct: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQGEIEVQWKDTEGELHNNLAD 120
           LITELRLLRSYFNKEQLQTPLLQFFEE LP+LSI  RGEQGEIEVQWK+TE ELH N AD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKNTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSM 180
           GIDIHASLLHRLS AYPNCSAGMRS NGFEFSSKSVKTNPFNVENLQIP+  LEEPSD+M
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180

Query: 181 MLGMPDILQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE 240
           +LGMPD+LQTPGVSNQRLSIGMTPKTRRLPKPGE+LVSIHGSPLGVY+E+NMEAIHESEE
Sbjct: 181 VLGMPDLLQTPGVSNQRLSIGMTPKTRRLPKPGEVLVSIHGSPLGVYREENMEAIHESEE 240

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BLAST of Spg012976 vs. NCBI nr
Match: XP_022133198.1 (uncharacterized protein LOC111005854 [Momordica charantia])

HSP 1 Score: 399.1 bits (1024), Expect = 2.8e-107
Identity = 214/241 (88.80%), Postives = 219/241 (90.87%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPGEKAKDEAENKLKNEEQAPLVSDEDVERHAAAIRAIRDVEIER 60
           MARRKAKKT KK SPSP      EAEN+ K EEQAPLVS+EDVERHAAAIRAIRDVEIER
Sbjct: 1   MARRKAKKTAKKLSPSPVR----EAENESKPEEQAPLVSNEDVERHAAAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQGEIEVQWKDTEGELHNNLAD 120
           LITELRLLRSYFNKEQLQTP+LQFFEE LPNLSI   GEQGEIEVQWKD  GELH   AD
Sbjct: 61  LITELRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPAD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSM 180
           GIDIHASLLHRLSIAYPNCSAGM+S+NGFEFSSKSVKTN FNVENLQIPS VLEEPSDSM
Sbjct: 121 GIDIHASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSM 180

Query: 181 MLGMPDILQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE 240
           MLGMPDILQTPGV NQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE
Sbjct: 181 MLGMPDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE 237

[Close]

BLAST of Spg012976 vs. NCBI nr
Match: KAG7034170.1 (hypothetical protein SDJN02_03897, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 398.7 bits (1023), Expect = 3.6e-107
Identity = 212/246 (86.18%), Postives = 225/246 (91.46%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPGEKAKDEAENKLKNEEQAPLVSDEDVERHAAAIRAIRDVEIER 60
           MARRKAKK+VKKSSPSP  +AKD + N+LK+E+QA LVSDEDVERHA AIRAIRDVEIER
Sbjct: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQGEIEVQWKDTEGELHNNLAD 120
           LITELRLLRSYFNKEQLQTPLLQFFEE LP+LSI  RGEQGEIEVQWKDTE ELH N AD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSM 180
           GIDIHASLLHRLS AYPNCSAGMRS NGFEFSSKSVKTNPFNVENLQIP+  LEEPSD+M
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180

Query: 181 MLGMPDILQTPG-----VSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAI 240
           +LGMPD+LQTPG     VSNQRLSIGMTPKTRRLPKPGE+LVSIHGSPLGVY+EDNMEAI
Sbjct: 181 VLGMPDLLQTPGVRIFMVSNQRLSIGMTPKTRRLPKPGEVLVSIHGSPLGVYREDNMEAI 240

[Close]

BLAST of Spg012976 vs. ExPASy TrEMBL
Match: A0A6J1BYE7 (uncharacterized protein LOC111005854 OS=Momordica charantia OX=3673 GN=LOC111005854 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-107
Identity = 214/241 (88.80%), Postives = 219/241 (90.87%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPGEKAKDEAENKLKNEEQAPLVSDEDVERHAAAIRAIRDVEIER 60
           MARRKAKKT KK SPSP      EAEN+ K EEQAPLVS+EDVERHAAAIRAIRDVEIER
Sbjct: 1   MARRKAKKTAKKLSPSPVR----EAENESKPEEQAPLVSNEDVERHAAAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQGEIEVQWKDTEGELHNNLAD 120
           LITELRLLRSYFNKEQLQTP+LQFFEE LPNLSI   GEQGEIEVQWKD  GELH   AD
Sbjct: 61  LITELRLLRSYFNKEQLQTPILQFFEEKLPNLSISATGEQGEIEVQWKDAAGELHTKPAD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSM 180
           GIDIHASLLHRLSIAYPNCSAGM+S+NGFEFSSKSVKTN FNVENLQIPS VLEEPSDSM
Sbjct: 121 GIDIHASLLHRLSIAYPNCSAGMQSMNGFEFSSKSVKTNAFNVENLQIPSFVLEEPSDSM 180

Query: 181 MLGMPDILQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE 240
           MLGMPDILQTPGV NQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE
Sbjct: 181 MLGMPDILQTPGVCNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE 237

[Close]

BLAST of Spg012976 vs. ExPASy TrEMBL
Match: A0A1S4DWB9 (uncharacterized protein LOC103489436 OS=Cucumis melo OX=3656 GN=LOC103489436 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.5e-106
Identity = 209/241 (86.72%), Postives = 219/241 (90.87%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPGEKAKDEAENKLKNEEQAPLVSDEDVERHAAAIRAIRDVEIER 60
           MARRKAKKTVKKSSPS G  AKDEA +K+K        SDEDVERHAAAIRAIRDVEIER
Sbjct: 1   MARRKAKKTVKKSSPSSGRHAKDEAADKIKTH------SDEDVERHAAAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQGEIEVQWKDTEGELHNNLAD 120
           LITELRLLRSYFNKEQLQTPLLQFFEE LP+LSI +RG+QGEIEVQWKDTE ELH N AD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGDQGEIEVQWKDTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSM 180
           G+DIHASLLHRLS AYP CSAGMRS NGFEFSSKSVKTNPFN ENLQIP+ VLEEPSD+M
Sbjct: 121 GVDIHASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNM 180

Query: 181 MLGMPDILQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE 240
           +LGMPDILQTPG+SNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE
Sbjct: 181 VLGMPDILQTPGISNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE 235

[Close]

BLAST of Spg012976 vs. ExPASy TrEMBL
Match: A0A6J1ILD3 (uncharacterized protein LOC111478496 OS=Cucurbita maxima OX=3661 GN=LOC111478496 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.3e-106
Identity = 207/240 (86.25%), Postives = 222/240 (92.50%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPGEKAKDEAENKLKNEEQAPLVSDEDVERHAAAIRAIRDVEIER 60
           MARRKAKK+VKKSSPSP  +AKD + N+LK+E+QA LVSDEDVERHA AIRAIRDVEIER
Sbjct: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEENLPNLSI-LRGEQGEIEVQWKDTEGELHNNLAD 120
           LITELRLLRSYFNKEQLQTPLLQFF E LP+LSI  RGEQGEIEVQWKDTE ELH N AD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFVEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSM 180
           GIDIHASLLHRLS AYPNCSAG+RS NGFEFSSKSVKTNPFNVENLQIP+ VLEEPSD+M
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGIRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNM 180

Query: 181 MLGMPDILQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE 240
           +LGMPD+LQTPG SNQRLSIGMTPKTRRLPKPGE++VSIHGSPLGVY+E NMEAIHESEE
Sbjct: 181 VLGMPDLLQTPGASNQRLSIGMTPKTRRLPKPGEVIVSIHGSPLGVYREYNMEAIHESEE 240

[Close]

BLAST of Spg012976 vs. ExPASy TrEMBL
Match: A0A6J1HHY4 (uncharacterized protein LOC111463139 OS=Cucurbita moschata OX=3662 GN=LOC111463139 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.8e-105
Identity = 213/241 (88.38%), Postives = 223/241 (92.53%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPGEKAKDEAENKLKNEEQAPLVSDEDVERHAAAIRAIRDVEIER 60
           MARRKAKKTVKKSSP   EK KDEAEN+LK+EEQ PLVSDEDVERHAAAIRAIRDVEIER
Sbjct: 1   MARRKAKKTVKKSSPR--EKEKDEAENELKSEEQEPLVSDEDVERHAAAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEENLPNLSIL-RGEQGEIEVQWKDTEGELHNNLAD 120
           LITELRLLRSYFNKEQLQTPLLQFF+E LPNLSI  +GE GEIEVQWK+TE EL  N  D
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKGEVGEIEVQWKETESELRANPVD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLE-EPSDS 180
           G+D+HASLL RLSIAYPN SAGMRSLNGFEFSSKSVKTNPFNVE+LQIPSLVLE EPSDS
Sbjct: 121 GMDVHASLLQRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDS 180

Query: 181 MMLGMPDILQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESE 240
           MMLGM DILQTPGVSNQRLSIGMTP+TRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHES+
Sbjct: 181 MMLGMTDILQTPGVSNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESD 239

[Close]

BLAST of Spg012976 vs. ExPASy TrEMBL
Match: A0A6J1KR76 (uncharacterized protein LOC111496903 OS=Cucurbita maxima OX=3661 GN=LOC111496903 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.1e-104
Identity = 212/241 (87.97%), Postives = 222/241 (92.12%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPGEKAKDEAENKLKNEEQAPLVSDEDVERHAAAIRAIRDVEIER 60
           MARRKAKK VKKSSP   EK KDEAEN+LK+EEQAPLVSDEDVERHAAAIRAIRDVEIER
Sbjct: 1   MARRKAKKIVKKSSPR--EKEKDEAENELKSEEQAPLVSDEDVERHAAAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEENLPNLSIL-RGEQGEIEVQWKDTEGELHNNLAD 120
           LITELRLLRSYFNKEQLQTPLLQFF+E LPNLSI  + E GEIEVQWK+TE EL  N  D
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFKEKLPNLSISGKSEVGEIEVQWKETESELRANPVD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLE-EPSDS 180
           G+D+HASLLHRLSIAYPN SAGMRSLNGFEFSSKSVKTNPFNVE+LQIPSLVLE EPSDS
Sbjct: 121 GMDVHASLLHRLSIAYPNYSAGMRSLNGFEFSSKSVKTNPFNVESLQIPSLVLEAEPSDS 180

Query: 181 MMLGMPDILQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESE 240
           MMLGM DILQTPG SNQRLSIGMTP+TRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHES+
Sbjct: 181 MMLGMTDILQTPGASNQRLSIGMTPRTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESD 239

[Close]

BLAST of Spg012976 vs. TAIR 10
Match: AT4G39630.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 203.0 bits (515), Expect = 2.7e-52
Identity = 120/238 (50.42%), Postives = 164/238 (68.91%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSPSPGEKAKDEAENKLKNEEQAPLVSDEDVERHAAAIRAIRDVEIER 60
           M +RKAK+ VK +     +      E +++ EE+     DE+VER  AAIRAIRDVEIE+
Sbjct: 1   MPKRKAKECVKLTEEDRND------EKRIRIEEKKEDFVDEEVERQIAAIRAIRDVEIEQ 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEENLPNLSILRGEQ-GEIEVQWKDTEGELHNNLAD 120
           ++T LRLLRSYF +EQL TP+L FF+ENLP+LSI R E+ GEIE++W+D  G+      +
Sbjct: 61  MLTALRLLRSYFTEEQLHTPVLDFFKENLPDLSISRNEETGEIELKWRDENGDSFAGNEN 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMRSLNGFEFSSKSVKTNPFNVENLQIPSLVLEEPSDSM 180
           G+D++ S+L RLS+ + +  +   SL G++    +VK N    +N Q+ +LV +  S++ 
Sbjct: 121 GVDMNYSILKRLSMRFTDLYS-RSSLGGYDLPD-NVKANLLGTDNPQLDNLVFQGTSENQ 180

Query: 181 MLGMPDILQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKED-NMEAIHE 237
           ML   D  QTPGV+ QRLS GMTPKT RLPK GEM++S+HGSPLGVYKED NM AI+E
Sbjct: 181 MLPGHDAFQTPGVNGQRLSFGMTPKTLRLPKAGEMMLSVHGSPLGVYKEDHNMGAINE 230

The following BLAST results are available for this feature:

BLAST of Spg012976 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6594850.1	6.6e-109	90.04	hypothetical protein SDJN03_11403, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6604007.1	6.6e-109	87.97	hypothetical protein SDJN03_04616, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023543921.1	5.6e-108	87.14	uncharacterized protein LOC111803645 [Cucurbita pepo subsp. pepo]	[more]
XP_022133198.1	2.8e-107	88.80	uncharacterized protein LOC111005854 [Momordica charantia]	[more]
KAG7034170.1	3.6e-107	86.18	hypothetical protein SDJN02_03897, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Spg012976 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg012976 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYE7	1.3e-107	88.80	uncharacterized protein LOC111005854 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A1S4DWB9	2.5e-106	86.72	uncharacterized protein LOC103489436 OS=Cucumis melo OX=3656 GN=LOC103489436 PE=...	[more]
A0A6J1ILD3	3.3e-106	86.25	uncharacterized protein LOC111478496 OS=Cucurbita maxima OX=3661 GN=LOC111478496...	[more]
A0A6J1HHY4	4.8e-105	88.38	uncharacterized protein LOC111463139 OS=Cucurbita moschata OX=3662 GN=LOC1114631...	[more]
A0A6J1KR76	1.1e-104	87.97	uncharacterized protein LOC111496903 OS=Cucurbita maxima OX=3661 GN=LOC111496903...	[more]

BLAST of Spg012976 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39630.1	2.7e-52	50.42	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..40
None	No IPR available	PANTHER	PTHR37248	TRANSLATION INITIATION FACTOR	coord: 1..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg012976.1	Spg012976.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
molecular_function	GO:0003743	translation initiation factor activity