Spg012975 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg012975
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Locationscaffold1: 12539482 .. 12542426 (+)
RNA-Seq ExpressionSpg012975
SyntenySpg012975
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCAGACTTGTTTCGATCGGCTCTGCAACATCCCCTTAACCCAGAAGTACTTCATTGAGACGAGAGTTGACGAGACACAGTCATTTGGGTAGAGAAAATATCCAACAGAAAGGGACACTCGGCCGAAATAGCTAAGCTTGGATCAAATGGGGGCATTAATAAATTGATTGTACCTGTGGGCGAGAATAGAAAAGGATGGCAGAGCCTCATAACCAGCATTCAATCCCTCACCAACCTCAGCCAACAAGCAGTTAATGTGCCTGAAGCCCCAAATGATGGCAACCGAAATGTCTCATATAAAGATGCATTAAAGAAGAACCAAGAGGACCACCACACCCACAAACAAAAGCAAGCCTACGTAGTTGTTTCAGCCCAACCAGCCTTGACCAATCCCGAGTTCGCTGCCATCTTCTTGTCATCCTCAGTTATAATCCAAAGAAAGCACTTCCACGGTAACTGGTATGATATCATGAGAGCTCTCCAACAACATTTATCTGCCTTTGCATCAGTCAGCCCTCTCCAACCCGATAAAGCCCGGCTAGCTTGCGAGGATGAAGAACAAACCCATACCCTTGCCAAAATAAAAGGATGGTATAAGGTGGGTAAATACCAGGTCCGTTTTTACCCTTGGAGCGCCGAAACCATGGTTGGTGAACCTAAGGTTCCCTCGTATGGAGGATGGATAAAGATCAGGAACTTTCCTCTTGATAAATGGTCTATAGAAACGTTTAAGCACATTGGTGATGAATGTGGAGGGTACTTGGAAACCGCTAATAAAACCCTAGCACGTATGGACATGATGGAAGTCAGTATTAAAGTCAAGGAGAACTACACAAGCTTCATCCCAGCTGAAATTCACCTCCCATCAGCATCATCAAACCCTACGACCATCAAAATCGACCCCTTCTTCATGGAAGAATATAACATTGGTTACATTGTCGGAATACATGGCAAAATCCCTCCCAGCATGGCGAATTATGATGAGAAAGATGATCGCGACCACCCACGCGCCGCCCCAACGCGATTAGGATCCAATGAAGGTAGTAGGCTGCAGAAACCGTACAAGTGGGAAACCCAAGGCACCCCCATTGATGCAAAGTTCTCTGCTCCTGATTTGACTTCAAATGATACTACGAGAGGGGCCCACGAACATCTCCATCTCCCAAGGAGTCCCAATCCCCAAAATCCCCACCTTTCAGATATAATGGGACCCACCCATCAAAATCCCCCACTCAAGCTACGCTAGCCGACCCAATCCAAAGAAGCCCAATACCAGCCCAATCTGAGACAGTCACCCAATCAAAGAGCTCCACCCACATTAAGCCAACCCACCAGCCAGACAACCGCACGCACAGGAAAAAGCCCATCATCATTAATAACAAGGAAACCTTCCTCCTCACGGGTACAATGCACTCCACAAACTCTGAGTTACCCGTCTCTGATTCCGAAGAAGGGATGTCTTCACCTTGCTTCACAGCCATGGAAGAAACACCAATAACCACTCGAGGGGCCCCCCAAATCGCATCTCCTCCGACCATATGCAAGCTTTTCGAAGATGATCAGGAGCCGCTACAACAGATAGAAAATCTTATCCCCCTGAGAATTGAAGAACCTATTAACCGATGCTCCAACCAAAACTCTATCAGAGAAGAATCTGCTCTTATAGAGATTGATGTGGAAGATGAGGAAAACGATGCATTCCCAACAGAAGCAACAAGCACAGACCTAGCGGTTTATCTCCCTATCTTATTCCCTTGGCTAACCGAGCACGGTATGTGCATCATGCATATGCCCGGCAGACAAAAGACCTCCACTGCCACCAAGAAGAAGGTCAAATGGGTTAAGGAATTACAAAATCTCCACACATCTGTGAACTACAATAAGTCCTCTACAGGTTACATATCAACGGGGTCGTCTGCTCCATCATGATTATAATCTCTTGGAATGTTCGAGGCATGGGCTCACGGAAAAAACGAGCCCTCATTAAAGACTTTCTATCCTCCCATAATCCGACTTTGGTGATTATCCAAGAGACTAAGATGGTTAACATTACCGAGCATTATCTGGGCTTCCATTGATGTTGAAGGAGCTTCGGGCGGGATTGTTATCTTATGGAATTAATCCTCTTTTGATGTTAAGGAGATTGTCGAAGGTATGTTCTCCCTATCCCTACACCTTTCTTTATCTGATGGCTTCTCCTTCTGGATCACAGGCGTCTATGGTCCTAATTCTACCAAAGATAGACGTTTGTTTTGGAAAGAACTAGCGGATCTTCAAGCTCTTTGTCTTCCTAACTGGATATTGGGGGGTGATTTCAATGTCATTCGTTGGACTTGGGAGAAATCCACACACACAGCTCCTACCCGTGCCATGAGGAGATTCAACCGTTTCATCAATGATAATGATCTTCAAGACATCCCCCTTGCCAATGGCAAATACTCTTGGTCCAACTTTAGACCTAATCCCACCATGACCCTTATTGACAGGTTTCTTATAACCGATAGCAGTATTACCAAATTCTCTAACGCCACAGCCCGTCGATTGGACAAAATCACCTCTGATCATTTCCCTATCAGCCTCACATTGGGGAAAGAAAAATGGGGACCAGCCCCTTTTAGGCTCAACAACGTTTGGCTTAACCACAAATCCTTCCTCATTACCGTGGATTCATGGTGGAAAAACACTCCATCTAGGGGTTGGCCCGGTCATGGATTCATCCAGAAATTAAAGGATCTCAAAAAGGAGATTAAACAGTGGAATCAATCGGTTTTCGGTCAGTATAGAGAGAAAAAATCTTGCCTGAATAAAGAGCTATCTTCCTTAGACCATAGGGAGGAACACGGTCAGCTATCTGCCCACGATGCTATCAGAAGAATAGAGATCAAGGCTGAACTCATCTCTATATCGGCCAATGAAGAGATCCTGTGGAGGCAAAATTGA

mRNA sequence

ATGGCTCCAGACTTGTTTCGATCGGCTCTGCAACATCCCCTTAACCCAGAAGGACACTCGGCCGAAATAGCTAAGCTTGGATCAAATGGGGGCATTAATAAATTGATTGTACCTGTGGGCGAGAATAGAAAAGGATGGCAGAGCCTCATAACCAGCATTCAATCCCTCACCAACCTCAGCCAACAAGCAGTTAATGTGCCTGAAGCCCCAAATGATGGCAACCGAAATGTCTCATATAAAGATGCATTAAAGAAGAACCAAGAGGACCACCACACCCACAAACAAAAGCAAGCCTACGTAGTTGTTTCAGCCCAACCAGCCTTGACCAATCCCGAGTTCGCTGCCATCTTCTTGTCATCCTCAGTTATAATCCAAAGAAAGCACTTCCACGGTAACTGGTATGATATCATGAGAGCTCTCCAACAACATTTATCTGCCTTTGCATCAGTCAGCCCTCTCCAACCCGATAAAGCCCGGCTAGCTTGCGAGGATGAAGAACAAACCCATACCCTTGCCAAAATAAAAGGATGGTATAAGGTGGGTAAATACCAGGTCCGTTTTTACCCTTGGAGCGCCGAAACCATGGTTGGTGAACCTAAGGTTCCCTCGTATGGAGGATGGATAAAGATCAGGAACTTTCCTCTTGATAAATGGTCTATAGAAACGTTTAAGCACATTGGTGATGAATGTGGAGGGTACTTGGAAACCGCTAATAAAACCCTAGCACGTATGGACATGATGGAAGTCAGTATTAAAGTCAAGGAGAACTACACAAGCTTCATCCCAGCTGAAATTCACCTCCCATCAGCATCATCAAACCCTACGACCATCAAAATCGACCCCTTCTTCATGGAAGAATATAACATTGGTTACATTGTCGGAATACATGGCAAAATCCCTCCCAGCATGGCGAATTATGATGAGAAAGATGATCGCGACCACCCACGCGCCGCCCCAACGCGATTAGGATCCAATGAAGGTAGTAGGCTGCAGAAACCGTACAAGTGGGAAACCCAAGGCACCCCCATTGATGCAAAATATAATGGGACCCACCCATCAAAATCCCCCACTCAAGCTACGCTAGCCGACCCAATCCAAAGAAGCCCAATACCAGCCCAATCTGAGACAGTCACCCAATCAAAGAGCTCCACCCACATTAAGCCAACCCACCAGCCAGACAACCGCACGCACAGGAAAAAGCCCATCATCATTAATAACAAGGAAACCTTCCTCCTCACGGGTACAATGCACTCCACAAACTCTGAGTTACCCGTCTCTGATTCCGAAGAAGGGATGTCTTCACCTTGCTTCACAGCCATGGAAGAAACACCAATAACCACTCGAGGGGCCCCCCAAATCGCATCTCCTCCGACCATATGCAAGCTTTTCGAAGATGATCAGGAGCCGCTACAACAGATAGAAAATCTTATCCCCCTGAGAATTGAAGAACCTATTAACCGATGCTCCAACCAAAACTCTATCAGAGAAGAATCTGCTCTTATAGAGATTGATGTGGAAGATGAGGAAAACGATGCATTCCCAACAGAAGCAACAAGCACAGACCTAGCGGTTTATCTCCCTATCTTATTCCCTTGGCTAACCGAGCACGGTATGTGCATCATGCATATGCCCGGCAGACAAAAGACCTCCACTGCCACCAAGAAGAAGGTCAAATGGGTTAAGGAATTACAAAATCTCCACACATCTGTGAACTACAATAAGTCCTCTACAGGTTACATATCAACGGGGTCGTTTCTTATAACCGATAGCAGTATTACCAAATTCTCTAACGCCACAGCCCGTCGATTGGACAAAATCACCTCTGATCATTTCCCTATCAGCCTCACATTGGGGAAAGAAAAATGGGGACCAGCCCCTTTTAGGCTCAACAACGTTTGGCTTAACCACAAATCCTTCCTCATTACCGTGGATTCATGGTGGAAAAACACTCCATCTAGGGGTTGGCCCGGTCATGGATTCATCCAGAAATTAAAGGATCTCAAAAAGGAGATTAAACAGTGGAATCAATCGGTTTTCGGTCAGTATAGAGAGAAAAAATCTTGCCTGAATAAAGAGCTATCTTCCTTAGACCATAGGGAGGAACACGGTCAGCTATCTGCCCACGATGCTATCAGAAGAATAGAGATCAAGGCTGAACTCATCTCTATATCGGCCAATGAAGAGATCCTGTGGAGGCAAAATTGA

Coding sequence (CDS)

ATGGCTCCAGACTTGTTTCGATCGGCTCTGCAACATCCCCTTAACCCAGAAGGACACTCGGCCGAAATAGCTAAGCTTGGATCAAATGGGGGCATTAATAAATTGATTGTACCTGTGGGCGAGAATAGAAAAGGATGGCAGAGCCTCATAACCAGCATTCAATCCCTCACCAACCTCAGCCAACAAGCAGTTAATGTGCCTGAAGCCCCAAATGATGGCAACCGAAATGTCTCATATAAAGATGCATTAAAGAAGAACCAAGAGGACCACCACACCCACAAACAAAAGCAAGCCTACGTAGTTGTTTCAGCCCAACCAGCCTTGACCAATCCCGAGTTCGCTGCCATCTTCTTGTCATCCTCAGTTATAATCCAAAGAAAGCACTTCCACGGTAACTGGTATGATATCATGAGAGCTCTCCAACAACATTTATCTGCCTTTGCATCAGTCAGCCCTCTCCAACCCGATAAAGCCCGGCTAGCTTGCGAGGATGAAGAACAAACCCATACCCTTGCCAAAATAAAAGGATGGTATAAGGTGGGTAAATACCAGGTCCGTTTTTACCCTTGGAGCGCCGAAACCATGGTTGGTGAACCTAAGGTTCCCTCGTATGGAGGATGGATAAAGATCAGGAACTTTCCTCTTGATAAATGGTCTATAGAAACGTTTAAGCACATTGGTGATGAATGTGGAGGGTACTTGGAAACCGCTAATAAAACCCTAGCACGTATGGACATGATGGAAGTCAGTATTAAAGTCAAGGAGAACTACACAAGCTTCATCCCAGCTGAAATTCACCTCCCATCAGCATCATCAAACCCTACGACCATCAAAATCGACCCCTTCTTCATGGAAGAATATAACATTGGTTACATTGTCGGAATACATGGCAAAATCCCTCCCAGCATGGCGAATTATGATGAGAAAGATGATCGCGACCACCCACGCGCCGCCCCAACGCGATTAGGATCCAATGAAGGTAGTAGGCTGCAGAAACCGTACAAGTGGGAAACCCAAGGCACCCCCATTGATGCAAAATATAATGGGACCCACCCATCAAAATCCCCCACTCAAGCTACGCTAGCCGACCCAATCCAAAGAAGCCCAATACCAGCCCAATCTGAGACAGTCACCCAATCAAAGAGCTCCACCCACATTAAGCCAACCCACCAGCCAGACAACCGCACGCACAGGAAAAAGCCCATCATCATTAATAACAAGGAAACCTTCCTCCTCACGGGTACAATGCACTCCACAAACTCTGAGTTACCCGTCTCTGATTCCGAAGAAGGGATGTCTTCACCTTGCTTCACAGCCATGGAAGAAACACCAATAACCACTCGAGGGGCCCCCCAAATCGCATCTCCTCCGACCATATGCAAGCTTTTCGAAGATGATCAGGAGCCGCTACAACAGATAGAAAATCTTATCCCCCTGAGAATTGAAGAACCTATTAACCGATGCTCCAACCAAAACTCTATCAGAGAAGAATCTGCTCTTATAGAGATTGATGTGGAAGATGAGGAAAACGATGCATTCCCAACAGAAGCAACAAGCACAGACCTAGCGGTTTATCTCCCTATCTTATTCCCTTGGCTAACCGAGCACGGTATGTGCATCATGCATATGCCCGGCAGACAAAAGACCTCCACTGCCACCAAGAAGAAGGTCAAATGGGTTAAGGAATTACAAAATCTCCACACATCTGTGAACTACAATAAGTCCTCTACAGGTTACATATCAACGGGGTCGTTTCTTATAACCGATAGCAGTATTACCAAATTCTCTAACGCCACAGCCCGTCGATTGGACAAAATCACCTCTGATCATTTCCCTATCAGCCTCACATTGGGGAAAGAAAAATGGGGACCAGCCCCTTTTAGGCTCAACAACGTTTGGCTTAACCACAAATCCTTCCTCATTACCGTGGATTCATGGTGGAAAAACACTCCATCTAGGGGTTGGCCCGGTCATGGATTCATCCAGAAATTAAAGGATCTCAAAAAGGAGATTAAACAGTGGAATCAATCGGTTTTCGGTCAGTATAGAGAGAAAAAATCTTGCCTGAATAAAGAGCTATCTTCCTTAGACCATAGGGAGGAACACGGTCAGCTATCTGCCCACGATGCTATCAGAAGAATAGAGATCAAGGCTGAACTCATCTCTATATCGGCCAATGAAGAGATCCTGTGGAGGCAAAATTGA

Protein sequence

MAPDLFRSALQHPLNPEGHSAEIAKLGSNGGINKLIVPVGENRKGWQSLITSIQSLTNLSQQAVNVPEAPNDGNRNVSYKDALKKNQEDHHTHKQKQAYVVVSAQPALTNPEFAAIFLSSSVIIQRKHFHGNWYDIMRALQQHLSAFASVSPLQPDKARLACEDEEQTHTLAKIKGWYKVGKYQVRFYPWSAETMVGEPKVPSYGGWIKIRNFPLDKWSIETFKHIGDECGGYLETANKTLARMDMMEVSIKVKENYTSFIPAEIHLPSASSNPTTIKIDPFFMEEYNIGYIVGIHGKIPPSMANYDEKDDRDHPRAAPTRLGSNEGSRLQKPYKWETQGTPIDAKYNGTHPSKSPTQATLADPIQRSPIPAQSETVTQSKSSTHIKPTHQPDNRTHRKKPIIINNKETFLLTGTMHSTNSELPVSDSEEGMSSPCFTAMEETPITTRGAPQIASPPTICKLFEDDQEPLQQIENLIPLRIEEPINRCSNQNSIREESALIEIDVEDEENDAFPTEATSTDLAVYLPILFPWLTEHGMCIMHMPGRQKTSTATKKKVKWVKELQNLHTSVNYNKSSTGYISTGSFLITDSSITKFSNATARRLDKITSDHFPISLTLGKEKWGPAPFRLNNVWLNHKSFLITVDSWWKNTPSRGWPGHGFIQKLKDLKKEIKQWNQSVFGQYREKKSCLNKELSSLDHREEHGQLSAHDAIRRIEIKAELISISANEEILWRQN
Homology
BLAST of Spg012975 vs. NCBI nr
Match: KAA0056838.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYJ99341.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 176.0 bits (445), Expect = 1.2e-39
Identity = 210/900 (23.33%), Postives = 333/900 (37.00%), Query Frame = 0

Query: 20  SAEIAKLGSNGGINKLIVPVGENRKGWQSLITSIQSLTNLSQQAVNVP------------ 79
           +AEI ++ + G    ++VP G +  GW+  +  I   ++   + +               
Sbjct: 65  TAEIFRIDNKGRKCSILVPEGPDSFGWKCFLALITFRSSAPTKRIRSEIRKEPVSTFSDS 124

Query: 80  -EAPNDGNRNVSYKDALKKNQEDHHTHKQKQAYVVVSAQPALTNPEFAAIFLS-----SS 139
             + +D +R  SY   L  + ED +  K+ +A    S+    ++  F    LS      +
Sbjct: 125 FSSDSDSSRK-SYAKVLSDSSEDDN-KKRYKATSDDSSSRRSSSIGFKPFTLSGNSFEKT 184

Query: 140 VIIQRKHFHGNWYDIMRALQQHLSAFASVSPLQPDKARLACEDEEQTHTLAK--IKGWYK 199
           VII R+ FH +W  IM +L++      S  P Q DKA L    +      +     GW  
Sbjct: 185 VIITRRCFHDDWNRIMFSLRKQSEIAFSYKPFQADKAILFLNSDHAKLLCSNKGANGWST 244

Query: 200 VGKYQVRFYPWSAETMVGEPKVPSYGGWIKIRNFPLDKWSIETFKHIGDECGGYLETANK 259
           VG YQV+F  W +        +PSYGGW++ R  PL  W+  TF+HIG  CGG+L+ A +
Sbjct: 245 VGNYQVKFESWDSNLHSFHSVIPSYGGWLRFRGIPLHLWNYNTFQHIGSACGGFLDVAKE 304

Query: 260 TLARMDMMEVSIKVKENYTSFIPAEIHLPSASSNPTTIKIDPFFMEEYNIGYIVGIHGKI 319
           T+    +++  IKV+ NYT F+PA I +         +         + +   V +HG  
Sbjct: 305 TMQMDKLIDAKIKVRYNYTGFVPASILITDNQGENFIVTTVQPAEARWLVERNVRVHGSF 364

Query: 320 PPSMANYDEKDDRDHPRAAPTRLGSNEGSRLQKPYKWETQGTPIDAKYNGTHPSKSPTQA 379
               A  DE D  +H     T      G +   P    T G       +  H     TQA
Sbjct: 365 RTKAA--DEFDQHNHLAETYT----YNGFQAIPPEPTRTHG-DYSIHNSDKHSISYHTQA 424

Query: 380 --TLADPIQRSPIPAQSETVTQSKSSTHIKPTHQPDNRTHRKKPIIINNKETFLLTGTM- 439
               +   +  P   Q     + K    +    Q      ++   I N K +FL  G + 
Sbjct: 425 KKNNSSESEYDPFDQQLSDRRKEKGKAILIINDQNHGHYSKRSKRISNRKVSFLSPGGIQ 484

Query: 440 -HSTNSEL----------PVSDSEEGMSSPCFTAMEETPITTRGAPQIASPPTICKLFED 499
            +S+N+E+           ++D  E   SP      +     +  PQ ++      L E 
Sbjct: 485 SNSSNTEINTKGKSLEISTINDQFEKRWSPRQKTKTKLTYRIKKDPQESTEDHNLSLKET 544

Query: 500 -----------DQEPLQQIENLIPLRIEEPINRCSNQ----NSIREESA----------- 559
                      D  P+  +E++I       ++  +NQ    NS   +SA           
Sbjct: 545 GEGSKQMNLSVDMGPISPLESMIQSENNHGLDTLNNQTPDGNSKSTDSAEAKNLTVSVKE 604

Query: 560 ------------------------LIEIDVEDEE-----------------------NDA 619
                                    +EID   +E                       + +
Sbjct: 605 GADQNKSASRSTAEGNSKDAKTGSEMEIDRAFKEKLVIWLKENELKLSPKYTNDVPSSSS 664

Query: 620 FPTEAT--STDLAVYLP------ILFPW----------------------LTEHGMCIMH 679
           FP   +  + D+A + P      IL  W                       T     +  
Sbjct: 665 FPVIVSDQNMDIAGHGPLGDKGGILVLWDDTKFKVNDIKVGNYSISLNILNTNGNWWLTS 724

Query: 680 MPGRQKTSTATK----------------------KKVKWVKE----------LQNLHTSV 734
           + G  K +  TK                        V+W +E          + N +  +
Sbjct: 725 VYGPYKYNDRTKLWPELEILQSLCLPNWLIAGDFNIVRWERETNAKSLDKRNMANFNNFI 784

BLAST of Spg012975 vs. NCBI nr
Match: TYK08190.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 174.5 bits (441), Expect = 3.4e-39
Identity = 205/900 (22.78%), Postives = 331/900 (36.78%), Query Frame = 0

Query: 20  SAEIAKLGSNGGINKLIVPVGENRKGWQSLITSIQSLTNLSQQAVNVP------------ 79
           +AEI ++ + G    ++VP G +  GW+S +  I   ++   + +               
Sbjct: 65  TAEIFRIDNKGRKCSILVPEGPDSFGWKSFLALITFRSSAPTKRIRSEIRKEPVSTFSDS 124

Query: 80  -EAPNDGNRNVSYKDALKKNQEDHHTHKQKQAYVVVSAQPALTNPEFAAIFLS-----SS 139
             + +D +R  SY   L  + ED +  K+ +A    S+    ++  F    LS      +
Sbjct: 125 FSSDSDSSRK-SYAKVLSDSSEDDN-KKRYKATSDDSSSRRSSSIGFKPFTLSGNSFEKT 184

Query: 140 VIIQRKHFHGNWYDIMRALQQHLSAFASVSPLQPDKARLACEDEEQTHTLAK--IKGWYK 199
           VII R+ FH +W  IM +L++      S  P Q DKA L    +      +     GW  
Sbjct: 185 VIITRRCFHDDWNRIMFSLRKQSEIAFSYKPFQADKAILFLNPDHAKLLCSNKGANGWST 244

Query: 200 VGKYQVRFYPWSAETMVGEPKVPSYGGWIKIRNFPLDKWSIETFKHIGDECGGYLETANK 259
           VG YQV+F  W +        +PSYGGW++ R  PL  W+  TF+HIG  CGG+L+ A +
Sbjct: 245 VGNYQVKFESWDSNLHSFHSVIPSYGGWLRFRGIPLHLWNYNTFQHIGSACGGFLDVAKE 304

Query: 260 TLARMDMMEVSIKVKENYTSFIPAEIHLPSASSNPTTIKIDPFFMEEYNIGYIVGIHGKI 319
           T+    +++  IKV+ NY  F+PA I +         +         + +   V +HG  
Sbjct: 305 TMQMDKLIDAKIKVRYNYIGFVPASILITDNQGENFIVTTVQPAEARWLVERNVRVHGSF 364

Query: 320 PPSMANYDEKDDRDHPRAAPTRLGSNEGSRLQKPYKWETQGTPIDAKYNGTHPSKSPTQA 379
               A  DE D  +H     T      G +   P    T G       +  H     TQA
Sbjct: 365 RTKAA--DEFDQHNHLAETYT----YNGFQAIPPEPTRTHG-DYSIHNSDKHSISYHTQA 424

Query: 380 --TLADPIQRSPIPAQSETVTQSKSSTHIKPTHQPDNRTHRKKPIIINNKETFLLTGTM- 439
               +   +  P   Q     + K    +    Q      ++   I N K +FL  G + 
Sbjct: 425 KKNNSSESEYDPFDQQLSDRRKEKGKAILIINDQDHGHYSKRSKRISNRKVSFLSPGGIQ 484

Query: 440 -HSTNSEL----------PVSDSEEGMSSPCFTAMEETPITTRGAPQIASPPTICKLFED 499
            +S+N+E+           ++D  E   SP      +     +  PQ ++      L E 
Sbjct: 485 SNSSNTEINTKGKSLEISTINDQFEKRWSPRQKTKTKLTYRIKKDPQESTEDHKLSLKET 544

Query: 500 -----------DQEPLQQIENLIPLRIEEPINRCSNQ----NSIREESA----------- 559
                      D  P+  +E++I       ++  +NQ    NS   +SA           
Sbjct: 545 GEGSKQMNLSVDMGPISPLESMIQSENNHGLDTFNNQTPDGNSKSTDSAEAKNLTVSVKE 604

Query: 560 ------------------------LIEID----------VEDEENDAFPTEATSTDLAVY 619
                                    +EID          +++ E    P        + Y
Sbjct: 605 GADQNKSASRSTAEGNSKDAKTGSELEIDRAFKEKLVIWLKENELKLSPKYTNDVPSSSY 664

Query: 620 LPILF-----------PWLTEHGMCIM--------------------------------H 679
            P++            P   + G+ ++                                 
Sbjct: 665 FPVIVSDQNMDIAGHGPLGDKGGILVLWDDTNFKVNDIKVGNYSISLNILNTNGNWWLTS 724

Query: 680 MPGRQKTSTATK----------------------KKVKWVKE----------LQNLHTSV 734
           + G  K +  TK                        V+W +E          + N +  +
Sbjct: 725 VYGPYKYNDRTKLWPELEILQSLCLPNWLIAGDFNIVRWERETNAKSLDKRNMANFNNFI 784

BLAST of Spg012975 vs. NCBI nr
Match: KAA0057507.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 174.5 bits (441), Expect = 3.4e-39
Identity = 205/900 (22.78%), Postives = 331/900 (36.78%), Query Frame = 0

Query: 20  SAEIAKLGSNGGINKLIVPVGENRKGWQSLITSIQSLTNLSQQAVNVP------------ 79
           +AEI ++ + G    ++VP G +  GW+S +  I   ++   + +               
Sbjct: 65  TAEIFRIDNKGRKCSILVPEGPDSFGWKSFLALITFRSSAPTKRIRSEIRKEPVSTFSDS 124

Query: 80  -EAPNDGNRNVSYKDALKKNQEDHHTHKQKQAYVVVSAQPALTNPEFAAIFLS-----SS 139
             + +D +R  SY   L  + ED +  K+ +A    S+    ++  F    LS      +
Sbjct: 125 FSSDSDSSRK-SYAKVLSDSSEDDN-KKRYKATSDDSSSRRSSSIGFKPFTLSGNSFEKT 184

Query: 140 VIIQRKHFHGNWYDIMRALQQHLSAFASVSPLQPDKARLACEDEEQTHTLAK--IKGWYK 199
           VII R+ FH +W  IM +L++      S  P Q DKA L    +      +     GW  
Sbjct: 185 VIITRRCFHDDWNRIMFSLRKQSEIAFSYKPFQADKAILFLNPDHAKLLCSNKGANGWST 244

Query: 200 VGKYQVRFYPWSAETMVGEPKVPSYGGWIKIRNFPLDKWSIETFKHIGDECGGYLETANK 259
           VG YQV+F  W +        +PSYGGW++ R  PL  W+  TF+HIG  CGG+L+ A +
Sbjct: 245 VGNYQVKFESWDSNLHSFHSVIPSYGGWLRFRGIPLHLWNYNTFQHIGSACGGFLDVAKE 304

Query: 260 TLARMDMMEVSIKVKENYTSFIPAEIHLPSASSNPTTIKIDPFFMEEYNIGYIVGIHGKI 319
           T+    +++  IKV+ NY  F+PA I +         +         + +   V +HG  
Sbjct: 305 TMQMDKLIDAKIKVRYNYIGFVPASILITDNQGENFIVTTVQPAEARWLVERNVRVHGSF 364

Query: 320 PPSMANYDEKDDRDHPRAAPTRLGSNEGSRLQKPYKWETQGTPIDAKYNGTHPSKSPTQA 379
               A  DE D  +H     T      G +   P    T G       +  H     TQA
Sbjct: 365 RTKAA--DEFDQHNHLAETYT----YNGFQAIPPEPTRTHG-DYSIHNSDKHSISYHTQA 424

Query: 380 --TLADPIQRSPIPAQSETVTQSKSSTHIKPTHQPDNRTHRKKPIIINNKETFLLTGTM- 439
               +   +  P   Q     + K    +    Q      ++   I N K +FL  G + 
Sbjct: 425 KKNNSSESEYDPFDQQLSDRRKEKGKAILIINDQDHGHYSKRSKRISNRKVSFLSPGGIQ 484

Query: 440 -HSTNSEL----------PVSDSEEGMSSPCFTAMEETPITTRGAPQIASPPTICKLFED 499
            +S+N+E+           ++D  E   SP      +     +  PQ ++      L E 
Sbjct: 485 SNSSNTEINTKGKSLEISTINDQFEKRWSPRQKTKTKLTYRIKKDPQESTEDHKLSLKET 544

Query: 500 -----------DQEPLQQIENLIPLRIEEPINRCSNQ----NSIREESA----------- 559
                      D  P+  +E++I       ++  +NQ    NS   +SA           
Sbjct: 545 GEGSKQMNLSVDMGPISPLESMIQSENNHGLDTFNNQTPDGNSKSTDSAEAKNLTVSVKE 604

Query: 560 ------------------------LIEID----------VEDEENDAFPTEATSTDLAVY 619
                                    +EID          +++ E    P        + Y
Sbjct: 605 GADQNKSASRSTAEGNSKDAKTGSELEIDRAFKEKLVIWLKENELKLSPKYTNDVPSSSY 664

Query: 620 LPILF-----------PWLTEHGMCIM--------------------------------H 679
            P++            P   + G+ ++                                 
Sbjct: 665 FPVIVSDQNMDIAGHGPLGDKGGILVLWDDTNFKVNDIKVGNYSISLNILNTNGNWWLTS 724

Query: 680 MPGRQKTSTATK----------------------KKVKWVKE----------LQNLHTSV 734
           + G  K +  TK                        V+W +E          + N +  +
Sbjct: 725 VYGPYKYNDRTKLWPELEILQSLCLPNWLIAGDFNIVRWERETNAKSLDKRNMANFNNFI 784

BLAST of Spg012975 vs. NCBI nr
Match: KAA0039309.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 162.5 bits (410), Expect = 1.3e-35
Identity = 193/907 (21.28%), Postives = 351/907 (38.70%), Query Frame = 0

Query: 15  NPEGHSAEIAKLGSNGGINKLIVPVGENRKGWQSLITSIQSLTNLSQQAVNV------PE 74
           N +G +AEI ++      + ++VP G  +  W S ++ I     +  +   +      PE
Sbjct: 88  NGKGCTAEIFRVDHKNRKSCILVPEGLEKSCWVSFLSMITPKVEVKAKTRPIFLPRSSPE 147

Query: 75  ---APNDGNRNVSYKDALKKNQEDHHTHKQKQAYVVVSAQPALTNP--EFAAIFLSSSVI 134
              +P       SY  A+ + +    +          S+Q +  +P      + L ++V+
Sbjct: 148 FRLSPPIDYHKRSYAKAVSEGRSSISSDSSDSYASSDSSQSSGNSPCDSPFPVLLENTVV 207

Query: 135 IQRKHFHGNWYDIMRALQQHLSAFASVSPLQPDKARLACEDEEQTHTLAKIKGWYKVGKY 194
           + R+ FH +W  I++ L++      + +    +K  +        + L + KGW  VGKY
Sbjct: 208 LVRRFFHDDWQKILQNLRKQTEESFTYNAFHAEKVLVHFNSNVPANLLCQNKGWTTVGKY 267

Query: 195 QVRFYPWSAETMVGEPKVPSYGGWIKIRNFPLDKWSIETFKHIGDECGGYLETANKTLAR 254
            VRF  W+  +      +PSYGGW   R  PL  W++ TF+ IG  CGG ++ A +T   
Sbjct: 268 TVRFEKWAPASHASPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEETKTA 327

Query: 255 MDMMEVSIKVKENYTSFIPAEIHLPSASSNPTTIKIDPFFMEEYNIGYIVGIHGKIP-PS 314
            +++E  +K++ NY+ F+PA + +     N   +++      ++ +   V +HG     +
Sbjct: 328 RNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTFKRQA 387

Query: 315 MANYDE-KDDRDH------PRAAPTRLGSNEGSR--------------LQKPYKWETQGT 374
            A++D+   D +          +P  L +  GSR              + KP K+ T  T
Sbjct: 388 AASFDDFNPDSEQFLFDGLEAISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYATSPT 447

Query: 375 PIDAKY---NGTHPSKSPTQATLADPI----------QRSPIPAQSETV----------- 434
            ++ +    N  H + + ++  +   I          Q+  IP+Q  +            
Sbjct: 448 TLNEEVVNDNSLHATANKSKLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYKPKRKVS 507

Query: 435 --TQSKSSTHIKPTHQPDNRTHRKKPIIINNKETFLLTGTMHSTNSELPVSDSEEG---- 494
             + S  +T   P   P N +  KK  +   +     + T+       P   + +G    
Sbjct: 508 FNSPSNKTTFFNPDSAPANHSPEKKKRVSRERSVKKKSSTIQ------PKLRANQGKGNL 567

Query: 495 MSSPCFTAMEETPITTRG---APQIASPPTI--CKLFED----DQEPLQQIEN--LIP-- 554
           ++ P      +   + +G      + + P +   K FED    D   +  I N  ++P  
Sbjct: 568 ITQPLQVVAHDLDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPET 627

Query: 555 --LRIEEP--------INRCSNQNSIREES--ALIEIDVEDEENDAFPTE---------- 614
             L++ +P        +N    ++S R        E   +D  ++AF  +          
Sbjct: 628 PELKMTDPEKSNSSPEVNYRKQKHSHRRRHYYRKKEDKEKDTNSEAFKNQLVTWLKENGL 687

Query: 615 ----------ATSTDLAVYLP-------ILFPWLTEHGMCIMHMPGRQKTS--------- 674
                     AT++  A++         IL  W  +H   +    G+   S         
Sbjct: 688 KLSIDTDSSGATTSTNALFSQLGSSAGGILILWDAQHHSLLSQEEGKFSLSANFSSFNNS 747

Query: 675 ---------TATKKKVKWVKELQNLH----------------------TSVNYNKSSTGY 734
                       ++++   ++L NLH                      T+V ++  S+  
Sbjct: 748 WWLTGLYGPVKRRERLNVWEDLHNLHHLNSSPWIIGGDLNVVRMREESTAVTFSSHSSNM 807

BLAST of Spg012975 vs. NCBI nr
Match: TYK00493.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 162.5 bits (410), Expect = 1.3e-35
Identity = 193/907 (21.28%), Postives = 351/907 (38.70%), Query Frame = 0

Query: 15  NPEGHSAEIAKLGSNGGINKLIVPVGENRKGWQSLITSIQSLTNLSQQAVNV------PE 74
           N +G +AEI ++      + ++VP G  +  W S ++ I     +  +   +      PE
Sbjct: 88  NGKGCTAEIFRVDHKNRKSCILVPEGLEKSCWVSFLSMITPKVEVKAKTRPIFLPRSSPE 147

Query: 75  ---APNDGNRNVSYKDALKKNQEDHHTHKQKQAYVVVSAQPALTNP--EFAAIFLSSSVI 134
              +P       SY  A+ + +    +          S+Q +  +P      + L ++V+
Sbjct: 148 FRLSPPIDYHKRSYAKAVSEGRSSISSDSSDSYASSDSSQSSGNSPCDSPFPVLLENTVV 207

Query: 135 IQRKHFHGNWYDIMRALQQHLSAFASVSPLQPDKARLACEDEEQTHTLAKIKGWYKVGKY 194
           + R+ FH +W  I++ L++      + +    +K  +        + L + KGW  VGKY
Sbjct: 208 LVRRFFHDDWQKILQNLRKQTEESFTYNAFHAEKVLVHFNSNVPANLLCQNKGWTTVGKY 267

Query: 195 QVRFYPWSAETMVGEPKVPSYGGWIKIRNFPLDKWSIETFKHIGDECGGYLETANKTLAR 254
            VRF  W+  +      +PSYGGW   R  PL  W++ TF+ IG  CGG ++ A +T   
Sbjct: 268 TVRFEKWAPASHASPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEETKTA 327

Query: 255 MDMMEVSIKVKENYTSFIPAEIHLPSASSNPTTIKIDPFFMEEYNIGYIVGIHGKIP-PS 314
            +++E  +K++ NY+ F+PA + +     N   +++      ++ +   V +HG     +
Sbjct: 328 RNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTFKRQA 387

Query: 315 MANYDE-KDDRDH------PRAAPTRLGSNEGSR--------------LQKPYKWETQGT 374
            A++D+   D +          +P  L +  GSR              + KP K+ T  T
Sbjct: 388 AASFDDFNPDSEQFLFDGLEAISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYATSPT 447

Query: 375 PIDAKY---NGTHPSKSPTQATLADPI----------QRSPIPAQSETV----------- 434
            ++ +    N  H + + ++  +   I          Q+  IP+Q  +            
Sbjct: 448 TLNEEVVNDNSLHATANKSKLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYKPKRKVS 507

Query: 435 --TQSKSSTHIKPTHQPDNRTHRKKPIIINNKETFLLTGTMHSTNSELPVSDSEEG---- 494
             + S  +T   P   P N +  KK  +   +     + T+       P   + +G    
Sbjct: 508 FNSPSNKTTFFNPDSAPANHSPEKKKRVSRERSVKKKSSTIQ------PKLRANQGKGNL 567

Query: 495 MSSPCFTAMEETPITTRG---APQIASPPTI--CKLFED----DQEPLQQIEN--LIP-- 554
           ++ P      +   + +G      + + P +   K FED    D   +  I N  ++P  
Sbjct: 568 ITQPLQVVAHDLDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPET 627

Query: 555 --LRIEEP--------INRCSNQNSIREES--ALIEIDVEDEENDAFPTE---------- 614
             L++ +P        +N    ++S R        E   +D  ++AF  +          
Sbjct: 628 PELKMTDPEKSNSSPEVNYRKQKHSHRRRHYYRKKEDKEKDTNSEAFKNQLVTWLKENGL 687

Query: 615 ----------ATSTDLAVYLP-------ILFPWLTEHGMCIMHMPGRQKTS--------- 674
                     AT++  A++         IL  W  +H   +    G+   S         
Sbjct: 688 KLSIDTDSSGATTSTNALFSQLGSSAGGILILWDAQHHSLLSQEEGKFSLSANFSSFNNS 747

Query: 675 ---------TATKKKVKWVKELQNLH----------------------TSVNYNKSSTGY 734
                       ++++   ++L NLH                      T+V ++  S+  
Sbjct: 748 WWLTGLYGPVKRRERLNVWEDLHNLHHLNSSPWIIGGDLNVVRMREESTAVTFSSHSSNM 807

BLAST of Spg012975 vs. ExPASy TrEMBL
Match: A0A5D3BKT8 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005570 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 5.7e-40
Identity = 210/900 (23.33%), Postives = 333/900 (37.00%), Query Frame = 0

Query: 20  SAEIAKLGSNGGINKLIVPVGENRKGWQSLITSIQSLTNLSQQAVNVP------------ 79
           +AEI ++ + G    ++VP G +  GW+  +  I   ++   + +               
Sbjct: 65  TAEIFRIDNKGRKCSILVPEGPDSFGWKCFLALITFRSSAPTKRIRSEIRKEPVSTFSDS 124

Query: 80  -EAPNDGNRNVSYKDALKKNQEDHHTHKQKQAYVVVSAQPALTNPEFAAIFLS-----SS 139
             + +D +R  SY   L  + ED +  K+ +A    S+    ++  F    LS      +
Sbjct: 125 FSSDSDSSRK-SYAKVLSDSSEDDN-KKRYKATSDDSSSRRSSSIGFKPFTLSGNSFEKT 184

Query: 140 VIIQRKHFHGNWYDIMRALQQHLSAFASVSPLQPDKARLACEDEEQTHTLAK--IKGWYK 199
           VII R+ FH +W  IM +L++      S  P Q DKA L    +      +     GW  
Sbjct: 185 VIITRRCFHDDWNRIMFSLRKQSEIAFSYKPFQADKAILFLNSDHAKLLCSNKGANGWST 244

Query: 200 VGKYQVRFYPWSAETMVGEPKVPSYGGWIKIRNFPLDKWSIETFKHIGDECGGYLETANK 259
           VG YQV+F  W +        +PSYGGW++ R  PL  W+  TF+HIG  CGG+L+ A +
Sbjct: 245 VGNYQVKFESWDSNLHSFHSVIPSYGGWLRFRGIPLHLWNYNTFQHIGSACGGFLDVAKE 304

Query: 260 TLARMDMMEVSIKVKENYTSFIPAEIHLPSASSNPTTIKIDPFFMEEYNIGYIVGIHGKI 319
           T+    +++  IKV+ NYT F+PA I +         +         + +   V +HG  
Sbjct: 305 TMQMDKLIDAKIKVRYNYTGFVPASILITDNQGENFIVTTVQPAEARWLVERNVRVHGSF 364

Query: 320 PPSMANYDEKDDRDHPRAAPTRLGSNEGSRLQKPYKWETQGTPIDAKYNGTHPSKSPTQA 379
               A  DE D  +H     T      G +   P    T G       +  H     TQA
Sbjct: 365 RTKAA--DEFDQHNHLAETYT----YNGFQAIPPEPTRTHG-DYSIHNSDKHSISYHTQA 424

Query: 380 --TLADPIQRSPIPAQSETVTQSKSSTHIKPTHQPDNRTHRKKPIIINNKETFLLTGTM- 439
               +   +  P   Q     + K    +    Q      ++   I N K +FL  G + 
Sbjct: 425 KKNNSSESEYDPFDQQLSDRRKEKGKAILIINDQNHGHYSKRSKRISNRKVSFLSPGGIQ 484

Query: 440 -HSTNSEL----------PVSDSEEGMSSPCFTAMEETPITTRGAPQIASPPTICKLFED 499
            +S+N+E+           ++D  E   SP      +     +  PQ ++      L E 
Sbjct: 485 SNSSNTEINTKGKSLEISTINDQFEKRWSPRQKTKTKLTYRIKKDPQESTEDHNLSLKET 544

Query: 500 -----------DQEPLQQIENLIPLRIEEPINRCSNQ----NSIREESA----------- 559
                      D  P+  +E++I       ++  +NQ    NS   +SA           
Sbjct: 545 GEGSKQMNLSVDMGPISPLESMIQSENNHGLDTLNNQTPDGNSKSTDSAEAKNLTVSVKE 604

Query: 560 ------------------------LIEIDVEDEE-----------------------NDA 619
                                    +EID   +E                       + +
Sbjct: 605 GADQNKSASRSTAEGNSKDAKTGSEMEIDRAFKEKLVIWLKENELKLSPKYTNDVPSSSS 664

Query: 620 FPTEAT--STDLAVYLP------ILFPW----------------------LTEHGMCIMH 679
           FP   +  + D+A + P      IL  W                       T     +  
Sbjct: 665 FPVIVSDQNMDIAGHGPLGDKGGILVLWDDTKFKVNDIKVGNYSISLNILNTNGNWWLTS 724

Query: 680 MPGRQKTSTATK----------------------KKVKWVKE----------LQNLHTSV 734
           + G  K +  TK                        V+W +E          + N +  +
Sbjct: 725 VYGPYKYNDRTKLWPELEILQSLCLPNWLIAGDFNIVRWERETNAKSLDKRNMANFNNFI 784

BLAST of Spg012975 vs. ExPASy TrEMBL
Match: A0A5A7US62 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003960 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.7e-39
Identity = 205/900 (22.78%), Postives = 331/900 (36.78%), Query Frame = 0

Query: 20  SAEIAKLGSNGGINKLIVPVGENRKGWQSLITSIQSLTNLSQQAVNVP------------ 79
           +AEI ++ + G    ++VP G +  GW+S +  I   ++   + +               
Sbjct: 65  TAEIFRIDNKGRKCSILVPEGPDSFGWKSFLALITFRSSAPTKRIRSEIRKEPVSTFSDS 124

Query: 80  -EAPNDGNRNVSYKDALKKNQEDHHTHKQKQAYVVVSAQPALTNPEFAAIFLS-----SS 139
             + +D +R  SY   L  + ED +  K+ +A    S+    ++  F    LS      +
Sbjct: 125 FSSDSDSSRK-SYAKVLSDSSEDDN-KKRYKATSDDSSSRRSSSIGFKPFTLSGNSFEKT 184

Query: 140 VIIQRKHFHGNWYDIMRALQQHLSAFASVSPLQPDKARLACEDEEQTHTLAK--IKGWYK 199
           VII R+ FH +W  IM +L++      S  P Q DKA L    +      +     GW  
Sbjct: 185 VIITRRCFHDDWNRIMFSLRKQSEIAFSYKPFQADKAILFLNPDHAKLLCSNKGANGWST 244

Query: 200 VGKYQVRFYPWSAETMVGEPKVPSYGGWIKIRNFPLDKWSIETFKHIGDECGGYLETANK 259
           VG YQV+F  W +        +PSYGGW++ R  PL  W+  TF+HIG  CGG+L+ A +
Sbjct: 245 VGNYQVKFESWDSNLHSFHSVIPSYGGWLRFRGIPLHLWNYNTFQHIGSACGGFLDVAKE 304

Query: 260 TLARMDMMEVSIKVKENYTSFIPAEIHLPSASSNPTTIKIDPFFMEEYNIGYIVGIHGKI 319
           T+    +++  IKV+ NY  F+PA I +         +         + +   V +HG  
Sbjct: 305 TMQMDKLIDAKIKVRYNYIGFVPASILITDNQGENFIVTTVQPAEARWLVERNVRVHGSF 364

Query: 320 PPSMANYDEKDDRDHPRAAPTRLGSNEGSRLQKPYKWETQGTPIDAKYNGTHPSKSPTQA 379
               A  DE D  +H     T      G +   P    T G       +  H     TQA
Sbjct: 365 RTKAA--DEFDQHNHLAETYT----YNGFQAIPPEPTRTHG-DYSIHNSDKHSISYHTQA 424

Query: 380 --TLADPIQRSPIPAQSETVTQSKSSTHIKPTHQPDNRTHRKKPIIINNKETFLLTGTM- 439
               +   +  P   Q     + K    +    Q      ++   I N K +FL  G + 
Sbjct: 425 KKNNSSESEYDPFDQQLSDRRKEKGKAILIINDQDHGHYSKRSKRISNRKVSFLSPGGIQ 484

Query: 440 -HSTNSEL----------PVSDSEEGMSSPCFTAMEETPITTRGAPQIASPPTICKLFED 499
            +S+N+E+           ++D  E   SP      +     +  PQ ++      L E 
Sbjct: 485 SNSSNTEINTKGKSLEISTINDQFEKRWSPRQKTKTKLTYRIKKDPQESTEDHKLSLKET 544

Query: 500 -----------DQEPLQQIENLIPLRIEEPINRCSNQ----NSIREESA----------- 559
                      D  P+  +E++I       ++  +NQ    NS   +SA           
Sbjct: 545 GEGSKQMNLSVDMGPISPLESMIQSENNHGLDTFNNQTPDGNSKSTDSAEAKNLTVSVKE 604

Query: 560 ------------------------LIEID----------VEDEENDAFPTEATSTDLAVY 619
                                    +EID          +++ E    P        + Y
Sbjct: 605 GADQNKSASRSTAEGNSKDAKTGSELEIDRAFKEKLVIWLKENELKLSPKYTNDVPSSSY 664

Query: 620 LPILF-----------PWLTEHGMCIM--------------------------------H 679
            P++            P   + G+ ++                                 
Sbjct: 665 FPVIVSDQNMDIAGHGPLGDKGGILVLWDDTNFKVNDIKVGNYSISLNILNTNGNWWLTS 724

Query: 680 MPGRQKTSTATK----------------------KKVKWVKE----------LQNLHTSV 734
           + G  K +  TK                        V+W +E          + N +  +
Sbjct: 725 VYGPYKYNDRTKLWPELEILQSLCLPNWLIAGDFNIVRWERETNAKSLDKRNMANFNNFI 784

BLAST of Spg012975 vs. ExPASy TrEMBL
Match: A0A5D3CA17 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00050 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.7e-39
Identity = 205/900 (22.78%), Postives = 331/900 (36.78%), Query Frame = 0

Query: 20  SAEIAKLGSNGGINKLIVPVGENRKGWQSLITSIQSLTNLSQQAVNVP------------ 79
           +AEI ++ + G    ++VP G +  GW+S +  I   ++   + +               
Sbjct: 65  TAEIFRIDNKGRKCSILVPEGPDSFGWKSFLALITFRSSAPTKRIRSEIRKEPVSTFSDS 124

Query: 80  -EAPNDGNRNVSYKDALKKNQEDHHTHKQKQAYVVVSAQPALTNPEFAAIFLS-----SS 139
             + +D +R  SY   L  + ED +  K+ +A    S+    ++  F    LS      +
Sbjct: 125 FSSDSDSSRK-SYAKVLSDSSEDDN-KKRYKATSDDSSSRRSSSIGFKPFTLSGNSFEKT 184

Query: 140 VIIQRKHFHGNWYDIMRALQQHLSAFASVSPLQPDKARLACEDEEQTHTLAK--IKGWYK 199
           VII R+ FH +W  IM +L++      S  P Q DKA L    +      +     GW  
Sbjct: 185 VIITRRCFHDDWNRIMFSLRKQSEIAFSYKPFQADKAILFLNPDHAKLLCSNKGANGWST 244

Query: 200 VGKYQVRFYPWSAETMVGEPKVPSYGGWIKIRNFPLDKWSIETFKHIGDECGGYLETANK 259
           VG YQV+F  W +        +PSYGGW++ R  PL  W+  TF+HIG  CGG+L+ A +
Sbjct: 245 VGNYQVKFESWDSNLHSFHSVIPSYGGWLRFRGIPLHLWNYNTFQHIGSACGGFLDVAKE 304

Query: 260 TLARMDMMEVSIKVKENYTSFIPAEIHLPSASSNPTTIKIDPFFMEEYNIGYIVGIHGKI 319
           T+    +++  IKV+ NY  F+PA I +         +         + +   V +HG  
Sbjct: 305 TMQMDKLIDAKIKVRYNYIGFVPASILITDNQGENFIVTTVQPAEARWLVERNVRVHGSF 364

Query: 320 PPSMANYDEKDDRDHPRAAPTRLGSNEGSRLQKPYKWETQGTPIDAKYNGTHPSKSPTQA 379
               A  DE D  +H     T      G +   P    T G       +  H     TQA
Sbjct: 365 RTKAA--DEFDQHNHLAETYT----YNGFQAIPPEPTRTHG-DYSIHNSDKHSISYHTQA 424

Query: 380 --TLADPIQRSPIPAQSETVTQSKSSTHIKPTHQPDNRTHRKKPIIINNKETFLLTGTM- 439
               +   +  P   Q     + K    +    Q      ++   I N K +FL  G + 
Sbjct: 425 KKNNSSESEYDPFDQQLSDRRKEKGKAILIINDQDHGHYSKRSKRISNRKVSFLSPGGIQ 484

Query: 440 -HSTNSEL----------PVSDSEEGMSSPCFTAMEETPITTRGAPQIASPPTICKLFED 499
            +S+N+E+           ++D  E   SP      +     +  PQ ++      L E 
Sbjct: 485 SNSSNTEINTKGKSLEISTINDQFEKRWSPRQKTKTKLTYRIKKDPQESTEDHKLSLKET 544

Query: 500 -----------DQEPLQQIENLIPLRIEEPINRCSNQ----NSIREESA----------- 559
                      D  P+  +E++I       ++  +NQ    NS   +SA           
Sbjct: 545 GEGSKQMNLSVDMGPISPLESMIQSENNHGLDTFNNQTPDGNSKSTDSAEAKNLTVSVKE 604

Query: 560 ------------------------LIEID----------VEDEENDAFPTEATSTDLAVY 619
                                    +EID          +++ E    P        + Y
Sbjct: 605 GADQNKSASRSTAEGNSKDAKTGSELEIDRAFKEKLVIWLKENELKLSPKYTNDVPSSSY 664

Query: 620 LPILF-----------PWLTEHGMCIM--------------------------------H 679
            P++            P   + G+ ++                                 
Sbjct: 665 FPVIVSDQNMDIAGHGPLGDKGGILVLWDDTNFKVNDIKVGNYSISLNILNTNGNWWLTS 724

Query: 680 MPGRQKTSTATK----------------------KKVKWVKE----------LQNLHTSV 734
           + G  K +  TK                        V+W +E          + N +  +
Sbjct: 725 VYGPYKYNDRTKLWPELEILQSLCLPNWLIAGDFNIVRWERETNAKSLDKRNMANFNNFI 784

BLAST of Spg012975 vs. ExPASy TrEMBL
Match: A0A5A7U495 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00340 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 5.5e-35
Identity = 89/312 (28.53%), Postives = 153/312 (49.04%), Query Frame = 0

Query: 10  LQHPLNPEGHSAEIAKLGSNGGINKLIVPVGENRKGWQSLI------------TSIQSLT 69
           +Q   N +G+ AEI ++   G    ++VP G  + GW   +            T+ ++L 
Sbjct: 121 VQKTYNRKGYIAEIYRVDDRGRKCCILVPEGSEKSGWAQFVSLLYGKKDSSKKTNYRTLL 180

Query: 70  NLSQQAVNVPEAPNDGNRNVSYKDALKKNQEDHHTHKQKQAYVVVSAQPALTNPEFAAIF 129
           N   +         D  +  SY +A+ K      + ++  ++     +   +N  F+  +
Sbjct: 181 NTKLKDGFSSSESGDDTKRRSYAEAVIKGSS---SDEETNSWTTNIKKTGKSNTNFSFEW 240

Query: 130 LSSSVIIQRKHFHGNWYDIMRALQQHLSAFASVSPLQPDKARLACEDEEQTHTLAKIKGW 189
              +V++ R+ FH +W  I+  L + L       P   DKA +  ++EEQ + + K KGW
Sbjct: 241 -ERTVVLTRRFFHDDWEKIVEKLNEQLDTTVRYKPFHADKALICFKNEEQANLICKNKGW 300

Query: 190 YKVGKYQVRFYPWSAETMVGEPKVPSYGGWIKIRNFPLDKWSIETFKHIGDECGGYLETA 249
             VG++ V+F  W+ +       +PSYGGWIK+R  PL  W++E+F  IGD CGG++E A
Sbjct: 301 TTVGRFYVKFEEWNQKAHASPKVIPSYGGWIKVRGVPLHAWNLESFTQIGDACGGFIEVA 360

Query: 250 NKTLARMDMMEVSIKVKENYTSFIPAEIHLPSASSNPTTIKIDPFFMEEYNIGYIVGIHG 309
            +T    D++E SI++K+NY+ FIPA I L     +   I++      ++++     IHG
Sbjct: 361 KETRELTDIIEASIRIKDNYSGFIPAFIKLFDKEEHSFIIQVIVKTEGKWHLERSPSIHG 420

BLAST of Spg012975 vs. ExPASy TrEMBL
Match: A0A5D3CFS8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00330 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 5.5e-35
Identity = 89/312 (28.53%), Postives = 153/312 (49.04%), Query Frame = 0

Query: 10  LQHPLNPEGHSAEIAKLGSNGGINKLIVPVGENRKGWQSLI------------TSIQSLT 69
           +Q   N +G+ AEI ++   G    ++VP G  + GW   +            T+ ++L 
Sbjct: 173 VQKTYNRKGYIAEIYRVDDRGRKCCILVPEGSEKSGWAQFVSLLYGKKDSSTKTNYRTLL 232

Query: 70  NLSQQAVNVPEAPNDGNRNVSYKDALKKNQEDHHTHKQKQAYVVVSAQPALTNPEFAAIF 129
           N   +         D  +  SY +A+ K      + ++  ++     +   +N  F+  +
Sbjct: 233 NTKLKDRFSSSESGDDTKRRSYAEAVIKGSS---SDEETNSWTTNIKKTGKSNTNFSFEW 292

Query: 130 LSSSVIIQRKHFHGNWYDIMRALQQHLSAFASVSPLQPDKARLACEDEEQTHTLAKIKGW 189
              +V++ R+ FH +W  I+  L + L       P   DKA +  ++EEQ + + K KGW
Sbjct: 293 -ERTVVLTRRFFHDDWEKIVEKLNEQLDTTVRYKPFHADKALICFKNEEQANLICKNKGW 352

Query: 190 YKVGKYQVRFYPWSAETMVGEPKVPSYGGWIKIRNFPLDKWSIETFKHIGDECGGYLETA 249
             VG++ V+F  W+ +       +PSYGGWIK+R  PL  W++E+F  IGD CGG++E A
Sbjct: 353 TTVGRFYVKFEEWNQKAHASPKVIPSYGGWIKVRGVPLHAWNLESFTQIGDACGGFIEVA 412

Query: 250 NKTLARMDMMEVSIKVKENYTSFIPAEIHLPSASSNPTTIKIDPFFMEEYNIGYIVGIHG 309
            +T    D++E SI++K+NY+ FIPA I L     +   I++      ++++     IHG
Sbjct: 413 KETRELTDIIEASIRIKDNYSGFIPAFIKLFDKEEHSFIIQVIVKTEGKWHLERSPSIHG 472

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0056838.11.2e-3923.33LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYJ993... [more]
TYK08190.13.4e-3922.78LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa][more]
KAA0057507.13.4e-3922.78LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa][more]
KAA0039309.11.3e-3521.28LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa][more]
TYK00493.11.3e-3521.28LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BKT85.7e-4023.33LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A5A7US621.7e-3922.78LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3CA171.7e-3922.78LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A5A7U4955.5e-3528.53DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3CFS85.5e-3528.53DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 175..250
e-value: 6.8E-10
score: 38.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..319

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg012975.1Spg012975.1mRNA