Spg012959 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg012959
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Germin-like protein
Location	scaffold1: 11874670 .. 11875260 (+)
RNA-Seq Expression	Spg012959
Synteny	Spg012959

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCAGACCCCGACCCACTTCAAGATTTCTGCATCCCAAATCCCAACTCCCCAAAAAACGCCGACGGCGGCGACCCTCCATGCAAGAACTCAACTTCCGTCACCGCCGACGATTTCGTGTTCTCCGGCGGAAAATCCGCCGGAACCTTCTCGAAAAGTGGGTTCGCCACCGTAGCCGCAAACCCAACTCTCTTCCCCGGATTGAACACGCTCGGAATGTCGTTCGTACGCGCCGACTTCAAAGTTGGCGCCATAAACCCGCCGCACGTGCACCCACGCGCGGCCGAGATGGTGTACGTGGTTCAGGGGAGCGTGTACGCCGGTTTTGTGGACTCGGCGAACCGGGTTTACTCGAAGGTGATCGGAGAAGGTGAAGTGATGGTGATTCCGAGAGGGCTGGTGCACTTTCAGATGAATGTGGGGAAGCGGACGGCGACGGTTTTCGGGTGTTTTAACAGTCAGAATCCGGGAACTCAGAAGATGGCGTCCGCCATTTTTGGCTCTGGGATTAAAGAAGAGCTTTTGGAGAAGGCTTTTGGCTTGAGCTTGAAGGAGATCAGGAGGATGAGGAGAATGTTTGATTCTTGA

mRNA sequence

ATGGCATCAGACCCCGACCCACTTCAAGATTTCTGCATCCCAAATCCCAACTCCCCAAAAAACGCCGACGGCGGCGACCCTCCATGCAAGAACTCAACTTCCGTCACCGCCGACGATTTCGTGTTCTCCGGCGGAAAATCCGCCGGAACCTTCTCGAAAAGTGGGTTCGCCACCGTAGCCGCAAACCCAACTCTCTTCCCCGGATTGAACACGCTCGGAATGTCGTTCGTACGCGCCGACTTCAAAGTTGGCGCCATAAACCCGCCGCACGTGCACCCACGCGCGGCCGAGATGGTGTACGTGGTTCAGGGGAGCGTGTACGCCGGTTTTGTGGACTCGGCGAACCGGGTTTACTCGAAGGTGATCGGAGAAGGTGAAGTGATGGTGATTCCGAGAGGGCTGGTGCACTTTCAGATGAATGTGGGGAAGCGGACGGCGACGGTTTTCGGGTGTTTTAACAGTCAGAATCCGGGAACTCAGAAGATGGCGTCCGCCATTTTTGGCTCTGGGATTAAAGAAGAGCTTTTGGAGAAGGCTTTTGGCTTGAGCTTGAAGGAGATCAGGAGGATGAGGAGAATGTTTGATTCTTGA

Coding sequence (CDS)

ATGGCATCAGACCCCGACCCACTTCAAGATTTCTGCATCCCAAATCCCAACTCCCCAAAAAACGCCGACGGCGGCGACCCTCCATGCAAGAACTCAACTTCCGTCACCGCCGACGATTTCGTGTTCTCCGGCGGAAAATCCGCCGGAACCTTCTCGAAAAGTGGGTTCGCCACCGTAGCCGCAAACCCAACTCTCTTCCCCGGATTGAACACGCTCGGAATGTCGTTCGTACGCGCCGACTTCAAAGTTGGCGCCATAAACCCGCCGCACGTGCACCCACGCGCGGCCGAGATGGTGTACGTGGTTCAGGGGAGCGTGTACGCCGGTTTTGTGGACTCGGCGAACCGGGTTTACTCGAAGGTGATCGGAGAAGGTGAAGTGATGGTGATTCCGAGAGGGCTGGTGCACTTTCAGATGAATGTGGGGAAGCGGACGGCGACGGTTTTCGGGTGTTTTAACAGTCAGAATCCGGGAACTCAGAAGATGGCGTCCGCCATTTTTGGCTCTGGGATTAAAGAAGAGCTTTTGGAGAAGGCTTTTGGCTTGAGCTTGAAGGAGATCAGGAGGATGAGGAGAATGTTTGATTCTTGA

Protein sequence

MASDPDPLQDFCIPNPNSPKNADGGDPPCKNSTSVTADDFVFSGGKSAGTFSKSGFATVAANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRVYSKVIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSGIKEELLEKAFGLSLKEIRRMRRMFDS

Homology

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BLAST of Spg012959 vs. NCBI nr
Match: XP_022977900.1 (germin-like protein subfamily 3 member 2 [Cucurbita maxima])

HSP 1 Score: 341.3 bits (874), Expect = 5.6e-90
Identity = 173/196 (88.27%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 1   MASDPDPLQDFCIPNPNSPKNADGGDPPCKNSTSVTADDFVFSGGKSAGTFSKSGFATVA 60
           +ASDPDPLQDFCIPNP S K     D PCKNST+VTADDFVFSGGKSAG FS+SGFATVA
Sbjct: 22  VASDPDPLQDFCIPNPKSTKK---DDLPCKNSTAVTADDFVFSGGKSAGPFSESGFATVA 81

Query: 61  ANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRVYSK 120
           ANP+LFPGLNTLGMSFVRADFK GAINPPHVHPRAAEMVYVVQG VYAGFVDSANR+Y+K
Sbjct: 82  ANPSLFPGLNTLGMSFVRADFKEGAINPPHVHPRAAEMVYVVQGRVYAGFVDSANRMYAK 141

Query: 121 VIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSGIKEELLEKAF 180
           VIGEGEVMVIPRGLVHFQMNVGK TATVFGCFNSQNPGTQ+MASAIFGSGIKEELLEKAF
Sbjct: 142 VIGEGEVMVIPRGLVHFQMNVGKGTATVFGCFNSQNPGTQRMASAIFGSGIKEELLEKAF 201

Query: 181 GLSLKEIRRMRRMFDS 197
           GLS KE+RRMRR F+S
Sbjct: 202 GLSSKELRRMRRRFES 214

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BLAST of Spg012959 vs. NCBI nr
Match: KAG6604355.1 (Germin-like protein subfamily 3 member 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 339.3 bits (869), Expect = 2.1e-89
Identity = 172/196 (87.76%), Postives = 181/196 (92.35%), Query Frame = 0


Query: 1   MASDPDPLQDFCIPNPNSPKNADGGDPPCKNSTSVTADDFVFSGGKSAGTFSKSGFATVA 60
           +ASDPDPLQDFCIPNP S K     D PCKNST+VTADDFVFSGGKSAG FS +GFATVA
Sbjct: 22  VASDPDPLQDFCIPNPKSTKK---DDLPCKNSTAVTADDFVFSGGKSAGPFSDNGFATVA 81

Query: 61  ANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRVYSK 120
           ANP+LFPGLNTLGMSFVRADFK GAINPPHVHPRAAEMVYVVQG VYAGFVDSANRVY+K
Sbjct: 82  ANPSLFPGLNTLGMSFVRADFKEGAINPPHVHPRAAEMVYVVQGRVYAGFVDSANRVYAK 141

Query: 121 VIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSGIKEELLEKAF 180
           VIGEGEVMVIPRGLVHFQMNVGK TATVFGCFNSQNPGTQ+MASAIFGSGIKEELLEKAF
Sbjct: 142 VIGEGEVMVIPRGLVHFQMNVGKGTATVFGCFNSQNPGTQRMASAIFGSGIKEELLEKAF 201

Query: 181 GLSLKEIRRMRRMFDS 197
           GLS K++RRMRR F+S
Sbjct: 202 GLSSKDLRRMRRRFES 214

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BLAST of Spg012959 vs. NCBI nr
Match: XP_022925793.1 (germin-like protein subfamily 3 member 2 [Cucurbita moschata] >KAG7034505.1 Germin-like protein subfamily 3 member 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 337.4 bits (864), Expect = 8.1e-89
Identity = 171/196 (87.24%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MASDPDPLQDFCIPNPNSPKNADGGDPPCKNSTSVTADDFVFSGGKSAGTFSKSGFATVA 60
           +ASDPDPLQDFCIPNP   K     D PCKNST+VTADDFVFSGGKSAG FS +GFATVA
Sbjct: 22  VASDPDPLQDFCIPNPKPTKK---DDLPCKNSTAVTADDFVFSGGKSAGPFSDNGFATVA 81

Query: 61  ANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRVYSK 120
           ANP+LFPGLNTLGMSFVRADFK GAINPPHVHPRAAEMVYVVQG VYAGFVDSANRVY+K
Sbjct: 82  ANPSLFPGLNTLGMSFVRADFKEGAINPPHVHPRAAEMVYVVQGRVYAGFVDSANRVYAK 141

Query: 121 VIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSGIKEELLEKAF 180
           VIGEGEVMVIPRGLVHFQMNVGK TATVFGCFNSQNPGTQ+MASAIFGSGIKEELLEKAF
Sbjct: 142 VIGEGEVMVIPRGLVHFQMNVGKGTATVFGCFNSQNPGTQRMASAIFGSGIKEELLEKAF 201

Query: 181 GLSLKEIRRMRRMFDS 197
           GLS K++RRMRR F+S
Sbjct: 202 GLSSKDLRRMRRRFES 214

[Close]

BLAST of Spg012959 vs. NCBI nr
Match: XP_023545026.1 (germin-like protein subfamily 3 member 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 331.3 bits (848), Expect = 5.8e-87
Identity = 168/196 (85.71%), Postives = 178/196 (90.82%), Query Frame = 0


Query: 1   MASDPDPLQDFCIPNPNSPKNADGGDPPCKNSTSVTADDFVFSGGKSAGTFSKSGFATVA 60
           +ASDPDPLQDFCIPNP S K     D PCKNST+VTADDFVFSGGKSAG FS+SGFA+VA
Sbjct: 22  VASDPDPLQDFCIPNPKSTKK---DDLPCKNSTAVTADDFVFSGGKSAGPFSESGFASVA 81

Query: 61  ANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRVYSK 120
           ANP+LFPGLNTLGMSFV ADFK GAINPPHVHPRAAEMVYVVQG VYAGFVDSANRVY+K
Sbjct: 82  ANPSLFPGLNTLGMSFVHADFKEGAINPPHVHPRAAEMVYVVQGRVYAGFVDSANRVYAK 141

Query: 121 VIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSGIKEELLEKAF 180
           VIGEGEVMVIP+GLVHFQMNVGK  A VFGCFNSQNPGTQ+MASAIFGSGIKEELLEKAF
Sbjct: 142 VIGEGEVMVIPKGLVHFQMNVGKGMARVFGCFNSQNPGTQRMASAIFGSGIKEELLEKAF 201

Query: 181 GLSLKEIRRMRRMFDS 197
           GLS  E+RRMRR F+S
Sbjct: 202 GLSSNELRRMRRRFES 214

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BLAST of Spg012959 vs. NCBI nr
Match: XP_038883343.1 (germin-like protein subfamily 3 member 2 [Benincasa hispida])

HSP 1 Score: 325.5 bits (833), Expect = 3.2e-85
Identity = 166/198 (83.84%), Postives = 177/198 (89.39%), Query Frame = 0


Query: 1   MASDPDPLQDFCIP--NPNSPKNADGGDPPCKNSTSVTADDFVFSGGKSAGTFSKSGFAT 60
           MASDPDPLQDFCIP  NP SP         CKNST+VTA+DF+FSGGKS G+FS+SGFAT
Sbjct: 16  MASDPDPLQDFCIPISNPKSPNKL------CKNSTAVTANDFIFSGGKSCGSFSESGFAT 75

Query: 61  VAANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRVY 120
           V+ANP+ FPGLNTLGMSFVRADFK GAINPPHVHPR AEMVYVVQG VY GFVDSANRVY
Sbjct: 76  VSANPSNFPGLNTLGMSFVRADFKEGAINPPHVHPRGAEMVYVVQGRVYVGFVDSANRVY 135

Query: 121 SKVIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSGIKEELLEK 180
           +KVI EGEVMVIPRGLVHFQMNVGKR ATVFGCFNSQNPGTQKMA+AIFGSGIKEELLEK
Sbjct: 136 AKVIEEGEVMVIPRGLVHFQMNVGKRKATVFGCFNSQNPGTQKMAAAIFGSGIKEELLEK 195

Query: 181 AFGLSLKEIRRMRRMFDS 197
           AFGLS KEIRRM+RMF+S
Sbjct: 196 AFGLSSKEIRRMKRMFES 207

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BLAST of Spg012959 vs. ExPASy Swiss-Prot
Match: Q9SR72 (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana OX=3702 GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 4.5e-66
Identity = 126/198 (63.64%), Postives = 155/198 (78.28%), Query Frame = 0


Query: 1   MASDPDPLQDFCIPNPNSPKNAD---GGDPPCKNSTSVTADDFVFSGGKSAGTFSKSGFA 60
           +ASDPDP+QDFCIP P +    D     + PCKNS+ VT +DFVFSG K+AG F+++GFA
Sbjct: 23  LASDPDPIQDFCIPKPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLKTAGNFTETGFA 82

Query: 61  TVAANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRV 120
           TV   P  FPGLNTLG+SFVRAD K G+INPPH HPRA E+ ++V+G VY+GFVDS N+V
Sbjct: 83  TVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDSNNKV 142

Query: 121 YSKVIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSGIKEELLE 180
           Y+KV+ EGE+MV P+GLVHFQMNVG  TAT+ G  NSQNPG QK+ S +FGSGI EELL 
Sbjct: 143 YAKVMEEGEMMVYPKGLVHFQMNVGDVTATIVGGLNSQNPGIQKIPSVVFGSGINEELLM 202

Query: 181 KAFGLSLKEIRRMRRMFD 196
           KAFGLSLK+I  +++ FD
Sbjct: 203 KAFGLSLKQIGTLKKRFD 220

[Close]

BLAST of Spg012959 vs. ExPASy Swiss-Prot
Match: Q6ESF0 (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.4e-51
Identity = 102/196 (52.04%), Postives = 139/196 (70.92%), Query Frame = 0


Query: 4   DPDPLQDFCIPNPNSPKNADGG---DPPCKNSTSVTADDFVFSGGKSAGTFS-KSGFATV 63
           DPD +QDFC+P+    +  +       PC++  ++TA DF FSG ++AG FS ++GFA V
Sbjct: 24  DPDAVQDFCVPDAGRGRPVELAMLPAYPCRSPANLTAGDFAFSGVRAAGNFSPETGFAGV 83

Query: 64  AANPTLFPGLNTLGMSFVRADFK-VGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRVY 123
           +  P  FPGL+TLGMSF RAD    G +NPPH HPRA E   V+ G VYAGFVDS  R++
Sbjct: 84  SVTPAQFPGLHTLGMSFARADLSAAGGVNPPHYHPRATETALVLAGRVYAGFVDSGGRLF 143

Query: 124 SKVIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSGIKEELLEK 183
           +KV+ +GEVMV PR +VHFQ+NVG   ATV+G FNS+NPG  ++ + +FGSGI+E +LE+
Sbjct: 144 AKVLEQGEVMVFPRAMVHFQLNVGDTPATVYGAFNSENPGIVRIPATVFGSGIREAVLER 203

Query: 184 AFGLSLKEIRRMRRMF 195
           AFGL+  E+RR+ + F
Sbjct: 204 AFGLTPAELRRLEKRF 219

[Close]

BLAST of Spg012959 vs. ExPASy Swiss-Prot
Match: Q75HJ4 (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.1e-39
Identity = 91/201 (45.27%), Postives = 123/201 (61.19%), Query Frame = 0


Query: 3   SDPDPLQDFCIP-NPNSPKNADGGDP-----PCKNSTSVTADDFVFSG-GKSAGTFSKSG 62
           +DP+P+QDFC+   P +   A    P     PCK +++V +DDF F+G   ++ T ++ G
Sbjct: 25  ADPEPVQDFCVAVVPRAGDAAAAACPAYPGFPCKPASTVVSDDFFFAGLAVASDTDNRFG 84

Query: 63  FATVAANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSAN 122
           F   AAN   FPGLNTLG+S  R D   G +NP H HPRA E+++VV G V AGFV +A 
Sbjct: 85  FNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFVSTAG 144

Query: 123 RVYSKVIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSG--IKE 182
             YSKV+GEGE  V+PRG++HFQ NVG   A V   FNSQ PG     S +FGS   I +
Sbjct: 145 EFYSKVLGEGETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSDPEIPD 204

Query: 183 ELLEKAFGLSLKEIRRMRRMF 195
            +L K+F +  K I+ ++  F
Sbjct: 205 AVLAKSFQVDAKIIKLLKSKF 225

[Close]

BLAST of Spg012959 vs. ExPASy Swiss-Prot
Match: Q7F731 (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=GER4 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.2e-38
Identity = 86/197 (43.65%), Postives = 124/197 (62.94%), Query Frame = 0


Query: 1   MASDPDPLQDFCIPNPNSPKNADGGDPPCKNSTSVTADDFVFSGGKSAG-TFSKSGFATV 60
           +A DPD LQD C+ +  SP   +G   PCK   +VTADDF F+G K+ G T + +G    
Sbjct: 23  LAGDPDMLQDVCVADLASPVKLNGF--PCK--ANVTADDFFFAGLKNPGNTNNPAGSNVT 82

Query: 61  AANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRVYS 120
           AAN   FPG+NTLG+S  R D+  G  NPPH HPRA E+++V++G +  GF+ +AN++++
Sbjct: 83  AANVQSFPGVNTLGVSMARIDYAPGGQNPPHTHPRATEIIFVLEGVLEVGFITTANKLFT 142

Query: 121 KVIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSG--IKEELLE 180
           K +  GEV V PRGLVHFQ N G   A V   FNSQ  GTQ +A+ +F +   +  ++L 
Sbjct: 143 KTVTAGEVFVFPRGLVHFQQNRGHGPAAVIAAFNSQLQGTQAIAATLFAAAPPVPSDVLA 202

Query: 181 KAFGLSLKEIRRMRRMF 195
           KAF + + ++  ++  F
Sbjct: 203 KAFRVDVPQVDAIKAKF 215

[Close]

BLAST of Spg012959 vs. ExPASy Swiss-Prot
Match: Q6I544 (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 8.9e-38
Identity = 87/193 (45.08%), Postives = 118/193 (61.14%), Query Frame = 0


Query: 2   ASDPDPLQDFCIPNPNSPKNADGGDPPCKNSTSVTADDFVFSGGKSAG-TFSKSGFATVA 61
           A DPD LQD C+ +  S    +G    CK   +VT DDF F G  +AG T +  G     
Sbjct: 25  AGDPDLLQDICVADLTSAVKVNGF--ACK--AAVTEDDFYFKGLAAAGNTNNTYGSVVTG 84

Query: 62  ANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRVYSK 121
           AN    PGLNTLG+S  R D+  G +NPPH HPRA EMV+V+QG++  GF+ +AN++Y+K
Sbjct: 85  ANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDVGFITTANKLYTK 144

Query: 122 VIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSG--IKEELLEK 181
            I  G+V V PRGL+HFQ N G   A V   FNSQ PGTQ +A  +F +   + + +L K
Sbjct: 145 TISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFAASPEVPDGVLTK 204

Query: 182 AFGLSLKEIRRMR 192
           AF +  KE+ +++
Sbjct: 205 AFQVGTKEVEKIK 213

[Close]

BLAST of Spg012959 vs. ExPASy TrEMBL
Match: A0A6J1INL7 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478053 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.7e-90
Identity = 173/196 (88.27%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 1   MASDPDPLQDFCIPNPNSPKNADGGDPPCKNSTSVTADDFVFSGGKSAGTFSKSGFATVA 60
           +ASDPDPLQDFCIPNP S K     D PCKNST+VTADDFVFSGGKSAG FS+SGFATVA
Sbjct: 22  VASDPDPLQDFCIPNPKSTKK---DDLPCKNSTAVTADDFVFSGGKSAGPFSESGFATVA 81

Query: 61  ANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRVYSK 120
           ANP+LFPGLNTLGMSFVRADFK GAINPPHVHPRAAEMVYVVQG VYAGFVDSANR+Y+K
Sbjct: 82  ANPSLFPGLNTLGMSFVRADFKEGAINPPHVHPRAAEMVYVVQGRVYAGFVDSANRMYAK 141

Query: 121 VIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSGIKEELLEKAF 180
           VIGEGEVMVIPRGLVHFQMNVGK TATVFGCFNSQNPGTQ+MASAIFGSGIKEELLEKAF
Sbjct: 142 VIGEGEVMVIPRGLVHFQMNVGKGTATVFGCFNSQNPGTQRMASAIFGSGIKEELLEKAF 201

Query: 181 GLSLKEIRRMRRMFDS 197
           GLS KE+RRMRR F+S
Sbjct: 202 GLSSKELRRMRRRFES 214

[Close]

BLAST of Spg012959 vs. ExPASy TrEMBL
Match: A0A6J1EG93 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433096 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.9e-89
Identity = 171/196 (87.24%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MASDPDPLQDFCIPNPNSPKNADGGDPPCKNSTSVTADDFVFSGGKSAGTFSKSGFATVA 60
           +ASDPDPLQDFCIPNP   K     D PCKNST+VTADDFVFSGGKSAG FS +GFATVA
Sbjct: 22  VASDPDPLQDFCIPNPKPTKK---DDLPCKNSTAVTADDFVFSGGKSAGPFSDNGFATVA 81

Query: 61  ANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRVYSK 120
           ANP+LFPGLNTLGMSFVRADFK GAINPPHVHPRAAEMVYVVQG VYAGFVDSANRVY+K
Sbjct: 82  ANPSLFPGLNTLGMSFVRADFKEGAINPPHVHPRAAEMVYVVQGRVYAGFVDSANRVYAK 141

Query: 121 VIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSGIKEELLEKAF 180
           VIGEGEVMVIPRGLVHFQMNVGK TATVFGCFNSQNPGTQ+MASAIFGSGIKEELLEKAF
Sbjct: 142 VIGEGEVMVIPRGLVHFQMNVGKGTATVFGCFNSQNPGTQRMASAIFGSGIKEELLEKAF 201

Query: 181 GLSLKEIRRMRRMFDS 197
           GLS K++RRMRR F+S
Sbjct: 202 GLSSKDLRRMRRRFES 214

[Close]

BLAST of Spg012959 vs. ExPASy TrEMBL
Match: A0A5A7SGJ6 (Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001100 PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 7.7e-85
Identity = 166/196 (84.69%), Postives = 173/196 (88.27%), Query Frame = 0


Query: 1   MASDPDPLQDFCIPNPNSPKNADGGDPPCKNSTSVTADDFVFSGGKSAGTFSKSGFATVA 60
           MASDPDPLQDFCIPNP S  N       CKNST+VTADDFVFSG KSAG FS++GFATVA
Sbjct: 1   MASDPDPLQDFCIPNPKSFPN-----QLCKNSTAVTADDFVFSGAKSAGPFSETGFATVA 60

Query: 61  ANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRVYSK 120
           ANP  FPGLNTLGMS VR D K GAINPPHVHPRAAEMVYVVQG VYAGFVDS NRVY+K
Sbjct: 61  ANPINFPGLNTLGMSLVRVDLKEGAINPPHVHPRAAEMVYVVQGKVYAGFVDSGNRVYAK 120

Query: 121 VIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSGIKEELLEKAF 180
           VI EGEVMVIPRG+VHFQMNVGKR ATVFGCFNSQNPGTQKMA+AIFGSGIKEELLEKAF
Sbjct: 121 VIEEGEVMVIPRGVVHFQMNVGKRRATVFGCFNSQNPGTQKMAAAIFGSGIKEELLEKAF 180

Query: 181 GLSLKEIRRMRRMFDS 197
           GLS KEIRRM+RMFDS
Sbjct: 181 GLSSKEIRRMKRMFDS 191

[Close]

BLAST of Spg012959 vs. ExPASy TrEMBL
Match: A0A1S3CIT4 (Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103500894 PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 7.7e-85
Identity = 166/196 (84.69%), Postives = 173/196 (88.27%), Query Frame = 0


Query: 1   MASDPDPLQDFCIPNPNSPKNADGGDPPCKNSTSVTADDFVFSGGKSAGTFSKSGFATVA 60
           MASDPDPLQDFCIPNP S  N       CKNST+VTADDFVFSG KSAG FS++GFATVA
Sbjct: 18  MASDPDPLQDFCIPNPKSFPN-----QLCKNSTAVTADDFVFSGAKSAGPFSETGFATVA 77

Query: 61  ANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRVYSK 120
           ANP  FPGLNTLGMS VR D K GAINPPHVHPRAAEMVYVVQG VYAGFVDS NRVY+K
Sbjct: 78  ANPINFPGLNTLGMSLVRVDLKEGAINPPHVHPRAAEMVYVVQGKVYAGFVDSGNRVYAK 137

Query: 121 VIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSGIKEELLEKAF 180
           VI EGEVMVIPRG+VHFQMNVGKR ATVFGCFNSQNPGTQKMA+AIFGSGIKEELLEKAF
Sbjct: 138 VIEEGEVMVIPRGVVHFQMNVGKRRATVFGCFNSQNPGTQKMAAAIFGSGIKEELLEKAF 197

Query: 181 GLSLKEIRRMRRMFDS 197
           GLS KEIRRM+RMFDS
Sbjct: 198 GLSSKEIRRMKRMFDS 208

[Close]

BLAST of Spg012959 vs. ExPASy TrEMBL
Match: A0A0A0KHH1 (Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G452110 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.2e-82
Identity = 163/196 (83.16%), Postives = 171/196 (87.24%), Query Frame = 0


Query: 1   MASDPDPLQDFCIPNPNSPKNADGGDPPCKNSTSVTADDFVFSGGKSAGTFSKSGFATVA 60
           +ASDPDPLQDFCIPNP S       D  CKNST+VTADDFVFSG KSAG FS +GFATVA
Sbjct: 17  IASDPDPLQDFCIPNPKS-----FPDQLCKNSTAVTADDFVFSGAKSAGPFSGTGFATVA 76

Query: 61  ANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRVYSK 120
           AN   FPGLNTLGMS VR D K GAINPPHVHPRAAEMVYVV+G VYAGFVDS NRVY+K
Sbjct: 77  ANSINFPGLNTLGMSLVRVDLKEGAINPPHVHPRAAEMVYVVEGKVYAGFVDSGNRVYAK 136

Query: 121 VIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSGIKEELLEKAF 180
           VI EGEVMVIPRG+VHFQMNVGKR ATVFGCFNSQNPGTQKMA+AIFGSGIKEELLEKAF
Sbjct: 137 VIEEGEVMVIPRGVVHFQMNVGKRRATVFGCFNSQNPGTQKMAAAIFGSGIKEELLEKAF 196

Query: 181 GLSLKEIRRMRRMFDS 197
           GLS KEIRRM+RMFDS
Sbjct: 197 GLSSKEIRRMKRMFDS 207

[Close]

BLAST of Spg012959 vs. TAIR 10
Match: AT3G10080.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 252.3 bits (643), Expect = 3.2e-67
Identity = 126/198 (63.64%), Postives = 155/198 (78.28%), Query Frame = 0


Query: 1   MASDPDPLQDFCIPNPNSPKNAD---GGDPPCKNSTSVTADDFVFSGGKSAGTFSKSGFA 60
           +ASDPDP+QDFCIP P +    D     + PCKNS+ VT +DFVFSG K+AG F+++GFA
Sbjct: 23  LASDPDPIQDFCIPKPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLKTAGNFTETGFA 82

Query: 61  TVAANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRV 120
           TV   P  FPGLNTLG+SFVRAD K G+INPPH HPRA E+ ++V+G VY+GFVDS N+V
Sbjct: 83  TVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDSNNKV 142

Query: 121 YSKVIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSGIKEELLE 180
           Y+KV+ EGE+MV P+GLVHFQMNVG  TAT+ G  NSQNPG QK+ S +FGSGI EELL 
Sbjct: 143 YAKVMEEGEMMVYPKGLVHFQMNVGDVTATIVGGLNSQNPGIQKIPSVVFGSGINEELLM 202

Query: 181 KAFGLSLKEIRRMRRMFD 196
           KAFGLSLK+I  +++ FD
Sbjct: 203 KAFGLSLKQIGTLKKRFD 220

[Close]

BLAST of Spg012959 vs. TAIR 10
Match: AT1G02335.1 (germin-like protein subfamily 2 member 2 precursor )

HSP 1 Score: 157.1 bits (396), Expect = 1.4e-38
Identity = 84/193 (43.52%), Postives = 118/193 (61.14%), Query Frame = 0


Query: 2   ASDPDPLQDFCIPNPNSPKNADGGDPPCKNSTSVTADDFVFSG-GKSAGTFSKSGFATVA 61
           A DPD LQD C+ + +     +G   PCK + ++T  DF F+G  K A   S  G A   
Sbjct: 22  AYDPDALQDLCVADKSHGTKLNGF--PCKETLNITESDFFFAGISKPAVINSTMGSAVTG 81

Query: 62  ANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRVYSK 121
           AN    PGLNTL +S  R D+  G +NPPH HPRA E+VYV++G +  GF+ +AN++++K
Sbjct: 82  ANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITTANKLFTK 141

Query: 122 VIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGS--GIKEELLEK 181
            I  GEV V PRGLVHFQ N GK  A+V   FNSQ PGT  +A+ +F +   + E++L K
Sbjct: 142 TIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTK 201

Query: 182 AFGLSLKEIRRMR 192
            F +  K + +++
Sbjct: 202 TFQVGSKMVDKIK 212

[Close]

BLAST of Spg012959 vs. TAIR 10
Match: AT1G18980.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.8e-38
Identity = 88/197 (44.67%), Postives = 121/197 (61.42%), Query Frame = 0


Query: 1   MASDPDPLQDFCIPNPNSPKNADGGDPPCKNSTSVTADDFVFSG-GKSAGTFSKSGFATV 60
           ++SD DPLQDFC+ +  +  + +G   PCK  +SV+A DF FSG G    T + +G A  
Sbjct: 26  LSSDSDPLQDFCVGDLKASPSINGF--PCK--SSVSASDFFFSGLGGPLNTSTPNGVAVS 85

Query: 61  AANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDSANRVYS 120
            AN   FPGLNTLG+S    +F  G +NPPH HPRA E   V++GSV+ GF+ + N ++S
Sbjct: 86  PANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTTNNTLFS 145

Query: 121 KVIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGSG--IKEELLE 180
           KV+  GE+ V+PRGLVHFQ NVGK  A +   FNSQ PG+  + S +FGS   I   +L 
Sbjct: 146 KVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNPTIPNAVLT 205

Query: 181 KAFGLSLKEIRRMRRMF 195
           K F      + +++  F
Sbjct: 206 KTFRTDDVTVNKLKSKF 218

[Close]

BLAST of Spg012959 vs. TAIR 10
Match: AT5G38960.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-37
Identity = 90/201 (44.78%), Postives = 121/201 (60.20%), Query Frame = 0


Query: 1   MASDPDPLQDFCIPNPNSPKNA-DGGDPPCKNSTSVTADDFVFSGGKSAGTFSKS--GFA 60
           +ASDP PLQDFCI   N+P NA       CK+   VTADDF FSG   A T   S  G  
Sbjct: 21  IASDPSPLQDFCI-GVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSN 80

Query: 61  TVAANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDS--AN 120
               N    PGLNTLG+S VR D+ +   NPPH HPRA E++ V +G+++ GF  S   N
Sbjct: 81  VTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFPEN 140

Query: 121 RVYSKVIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGS--GIKE 180
           R+++K + +G+V V P GL+HFQ+N+GK+ A  F   +SQNPG   + + +FGS   I  
Sbjct: 141 RLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGSKPPIDP 200

Query: 181 ELLEKAFGLSLKEIRRMRRMF 195
            +L KAF L  K I ++++ F
Sbjct: 201 NVLAKAFQLDPKVIIQLQKKF 220

[Close]

BLAST of Spg012959 vs. TAIR 10
Match: AT3G04200.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 2.0e-37
Identity = 91/199 (45.73%), Postives = 121/199 (60.80%), Query Frame = 0


Query: 4   DPDPLQDFCIPNPNSPKNADGGDPPCKNSTSVTADDFVFSG---GKSAGTFSKSGFATVA 63
           DP+PLQDFC+    + +    G   CK+  SVTA+DF +SG    ++   F  S   TV 
Sbjct: 27  DPNPLQDFCVAASETNRVFVNG-KFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVD 86

Query: 64  ANPTLFPGLNTLGMSFVRADFKVGAINPPHVHPRAAEMVYVVQGSVYAGFVDS---ANRV 123
            N    PGLNTLG+S  R DF  G  NPPH+HPRA E++ V +G +  GFV S    NR+
Sbjct: 87  VNK--IPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRL 146

Query: 124 YSKVIGEGEVMVIPRGLVHFQMNVGKRTATVFGCFNSQNPGTQKMASAIFGS--GIKEEL 183
           + KV+  G+V V P GL+HFQMNV +  A  F  F SQNPGT ++A A+FGS   I +E+
Sbjct: 147 FYKVLKRGDVFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPGTIRIADAVFGSNPSIPQEV 206

Query: 184 LEKAFGLSLKEIRRMRRMF 195
           L KAF L +K +R +  +F
Sbjct: 207 LAKAFQLDVKLVRFLHIVF 222

The following BLAST results are available for this feature:

BLAST of Spg012959 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977900.1	5.6e-90	88.27	germin-like protein subfamily 3 member 2 [Cucurbita maxima]	[more]
KAG6604355.1	2.1e-89	87.76	Germin-like protein subfamily 3 member 2, partial [Cucurbita argyrosperma subsp....	[more]
XP_022925793.1	8.1e-89	87.24	germin-like protein subfamily 3 member 2 [Cucurbita moschata] >KAG7034505.1 Germ...	[more]
XP_023545026.1	5.8e-87	85.71	germin-like protein subfamily 3 member 2 [Cucurbita pepo subsp. pepo]	[more]
XP_038883343.1	3.2e-85	83.84	germin-like protein subfamily 3 member 2 [Benincasa hispida]	[more]

BLAST of Spg012959 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR72	4.5e-66	63.64	Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana OX=3702 GN=At3g...	[more]
Q6ESF0	1.4e-51	52.04	Germin-like protein 2-4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0532500...	[more]
Q75HJ4	6.1e-39	45.27	Germin-like protein 3-8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0804700...	[more]
Q7F731	5.2e-38	43.65	Germin-like protein 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=GER4 PE=2 SV...	[more]
Q6I544	8.9e-38	45.08	Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500...	[more]

BLAST of Spg012959 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1INL7	2.7e-90	88.27	Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478053 PE=3 SV=1	[more]
A0A6J1EG93	3.9e-89	87.24	Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433096 PE=3 SV=1	[more]
A0A5A7SGJ6	7.7e-85	84.69	Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G...	[more]
A0A1S3CIT4	7.7e-85	84.69	Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103500894 PE=3 SV=1	[more]
A0A0A0KHH1	1.2e-82	83.16	Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G452110 PE=3 SV=1	[more]

BLAST of Spg012959 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10080.1	3.2e-67	63.64	RmlC-like cupins superfamily protein	[more]
AT1G02335.1	1.4e-38	43.52	germin-like protein subfamily 2 member 2 precursor	[more]
AT1G18980.1	1.8e-38	44.67	RmlC-like cupins superfamily protein	[more]
AT5G38960.1	1.2e-37	44.78	RmlC-like cupins superfamily protein	[more]
AT3G04200.1	2.0e-37	45.73	RmlC-like cupins superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 90..110 score: 50.61 coord: 120..140 score: 52.49 coord: 153..168 score: 48.26
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 40..188 e-value: 1.2E-43 score: 161.0
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 50..187 e-value: 2.0E-41 score: 141.1
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 3..196 e-value: 1.9E-70 score: 238.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR31238	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 2..195
None	No IPR available	PANTHER	PTHR31238:SF8	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 2	coord: 2..195
None	No IPR available	CDD	cd02241	cupin_OxOx	coord: 4..194 e-value: 7.20736E-81 score: 236.723
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 38..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg012959.1	Spg012959.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0048046	apoplast
molecular_function	GO:0030145	manganese ion binding
molecular_function	GO:0016491	oxidoreductase activity