Spg012873 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg012873
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold1: 19367178 .. 19373861 (+)
RNA-Seq ExpressionSpg012873
SyntenySpg012873
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGGAGCTGAGAAGGACAGTGCAATACCAACCCAAGGAGACAACCAAGAAACGGGCCCCGGAGGAAGAACAAGCCAAAGGGTCGGACCAAGGTCGGAGGGATCGGGCCTTGGCCCAACCCATATGGTCGGCCTCGACCCACTTGTGTGGGTCGAGTCCTTCCGCCTCCGTTCAGTCCCTACTGTCCCTGCCCGTCCTGGTTCCACTCGGTTCAGCAATGGATTGCCTTCGAACGCCTAAAAAACCCTAACTGAAGACACACGTATAATTGGGGTCTCCTACACCCGGAAAAAGGTTCAGAAAACTAACAACAGAAACACTTTTTACTGTTGATCTAACTTAGGCATCGGAGTGTAGGTGGCCTACACCACACCGGTGTGCAGCGGTTCTTACTGGTTTTGCAGGTCACGTCTTTCCCATCTTCAACAAATTCACTGCTGGTGTCACGTGAAGGTCAGGTGAGTAACTTGGCCAGATTTTGGCATCAACATAGTATGTTCTCGAGATCAAATATAGATGATTACATTTCTTAAGATTTCCAAATGTTATCCCTACATATTTTATATCATATGGTAATCATTAGTTTGTATAATCAAATAATTGATAAGATCTAATCGACTACAATCATGATAACTCTAATGGATTTACCTTCTATTTTTGCTACGATTTTTAAAATATTTTTTCCTAAATTATATTTTCGGACATGATTTTGTGATGGTTTTACATACTTAGATATAGACTTGAGGAATACGCTAATAGTACAAGACGATGGTGACAAGTTAAGGTTGAATAATACACTGTTTGTCTTTTTTTTTTTTTTTTTTTGGTGGAAAAAAGTAAATTAGATTTATGAATGAAAATGAAAAGAAAAATCTACTCACATCATTTTTGTAATTAAAAAAATATATGAGAATAGAAAATTTGAATCTCTAATATCTTATTCAATGATATATATATTTTCATCAATTAAGTTATACTCAGGTTGATTAATCTGTTGGTTTTATATTATTCAATCGGAAAAATTAGATTAATTAAGAACCTTAGTTAAAAGATTAGAGGTGGGATTTTTTTTTTTTCTAATGTGATTTCTTTTAAACTCTCAAGACTTCAAACTAAAATTCAATGGAAAATTATGATTCCAATTGGGACGGAGATTTGACGAGGATTTGAAGAATCTAATATATAGAGATTTGATTTTCTTGAAGAAAAATATACATCCCTTTTTTTTTTAATATTGATTATTCGATAAAAAAAAAAGTTAACTTAATATTGATTAAAAAAATTAATTCTTTATATTTAGGCTTAAAGATTAAAGAATATATATATTAATCTAAACTATTTATTGGGTTAAATATTTAACTTTCAAATTTCTTTTTTAATATGATGATGAGTGAGAATTCAAAAATTTAGTTATATTCAAATTTAACATCATTTTTAGAGTCGAGAAAAAGAGATGTATTATTATTGTTACCGTTATTATTTTGAGTTCAACAATATTTAGAAGAGAAGGATTTGAACATCTAACCTCTTGGTCAACGATATATGTCAATTACAGCTGAGTTATGCTCACTTTGACAAAGGGATTGTCCCTAAACTTTAATAAGTAACAATTTAGTCCCTGTACTTTCAAATTTGTAACGATTGTCCCTATCGTGTGAAAAATTAATGTAAAGATTTAATGAAATTTCTTACCTAAGATTAATAAACTAATTTGGGACCCAATATGTTAATAAGCTACAAAGTTTAATCATTAAATAATAAAAATCGACATTTAATTTTCATGAATTTTTTTGCGACATAGATTAAATTGTTACAAATTTGAAAGTATAAGGACTAAATTGTTACTTATTAAAGTTCATGAACTAAATTGTTACAAAATTGAAAGTAGAATGACTAAATCGTTACAAATCAAAGTTTAGGGACCAAATTGTTACTTTCATGAAAGTTTAGGGACCAAAAGTAACTTTTAACCGTTTTCTTTTCATAATCATGTATATTGACTAGAACTAGAACAACGAACCTCCGGTGGCCGCAGGACATCGGATTCCGACGAAATTACTGTAAACGTGCCGGCGACTGTTCTGATAACGAGAGATTGAATTTGATTGCGGCTCGTTTCAGCTATGAAGATCGGACCGAGAACGAGAGCGAGATTTCGCCGGGCGGGATTCGAATTCCGAAATCCGAAATGTTGCGGCGGAGGACGGCCGGAAAATCCAAACTCGGCTCATTCTCCGAAATCTTTGCTCCGGCGGCGGCGGTGGTCGAGTTGAGAAGGAGGAGGCGCAGGCGAATTGGGTTCTCTTATGGAGGTTTGTTTATGAGACTTTTGAACAAGGTTTGATGGGATGTCTATTTAGAGAAAGGTTACAAAAATTTCAGTTGAGTTATTTAAATATTCATAAGGGTTAAAATATTCCTTGTTAGAATTATTTAAATTATCACTATGGTTTAAAATATCTCTTTTAGTTTTTTAGATTTATTCTAGTTAGATTCTTTTTACTTTTCTCTTTTTCAACAAATTTACCCAATATACTTTGAAATTTCAAATCTTAGTTTACATGCTCAAGTTAGATAATTCTTTTTTTTTTTTTGATATAAAGTTAGATAAAAATTAACTTAAAACAACGAAAACAAATTTTGACATTTCTAGGTAAGAAATTACACACCATTTGAATATGTTCCCCAAATTTCTAGTTTGGAAGATTGGACTAATTTTTTTGTTAGCAAAAGTTAATAATAAACTAATGGAGTATAGAGATTAAATGTATATATATGTATGTATTGTTATAGGCAATTTTGGGCCACCCGATGCACAAGGAGCTGACGAGGACGTCCGGGCGAAAACAGGACTAGGAGACCGATCCAGGGGACGAACCGACCAAAGGGTCGGGCCAGCTTGGCCCGACCCATATGGTCGGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGCCCCTGATGCCTCTAGCCGCCCCGGTTTCGTCTGGTTTGTCTCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGGTATTTATACCCCTCTTCGCCACTGAAGAAGGGGACCCGAACTCAATTCTCAACTCTCTTCTCTTACTCTCTTGCTCTCCTCTTCCGTTTTCTGACTTAAGCATCAGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTACTCTTTTGCAGGCCACGTCTTCCCCCGCTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAGGTATTTTACCTAGCGAAATTTGATCATCAACATGTATGTTGGTTCTAGCCATTGTTATTACTTTGTTACCTAATATGTGCCTTCATCCCACTCAATATACCCACTCCATCAACTAAGATGGCCTACATGAATACGTTAGTAGGCATTAATGTTGATATAATTGAAATATTGATGTTAATCTAATCTTAAATTAATAGCAACAAACTAAAAAGCAATAGCTAAGGTCCCGTTCGATAACCATTTGGTTTTTTGTTTTTAGTTTTTGAAAATTATGGTGGTTTTCTCCTACATTCCCTACCATGACTTTTTTTTTTTTGAATAACTCTACCATGACTTTCATCATTGTCAAGGATCCATTTGAATTTCTAGCCAAATTCTAAAAACAAAAACAAATTTTTGAAAACTACATTTTTTTTTTTTTCAAAATTGGACTTGGTTTTTTAAAACAATGAAGAAGATTGATACTAAAACAAAAAAAACTTATAGGTGGAAGTAGGTGTGCATAAGCTTAATTTTCAAAAACCAAAAACCAAAAACCAAATGGTTATCAAACGGGGCCTAAACTATTGTTTTTTTTTTACAATATGCACGACAGAGAAATTTGAACCTCTGACCTTTGGGTCAAGAGTATACATTTATGCAAGTTGAGCTATGCTCTTATTTCAACTATGTTCCACCATTTTTTTTAAATAATAAATATCATGAAAAACTAAAAATTAGTACAACTACCCTCATAAAGAAGAGTGAAAATCCAATCAAGGAAACCAAGGGCCCAAAAAAATCACCTATCTTCTTGCGAGAAAGATGCTCTCTAATTCGAAACAAAAGAAAATTCGACAGTCTTCCTTGCTACACAGTGGGCTACTGTATTCTCTTCCCTCCAGTAGTGAGGAAGCACTATATTACCCAGATCGGAGGTTATCACGCTGATCGCTTCTACCTCAAGAGTCAAAATATAGTACAAGTGACTATTATTCTTGATTACTTTTCCTAATTCCCATAATTAATGGAAAAATTTAGGTCTATATTTTGTAAAATGTCATGAAATAGCAAAAACTCATCACATGTATTGTCTGGTAGTAATCATGCTATTATTGATTAACATCAACGTTATTGACCTTGTTTTAAGAACTCAAAGGTCGTTAAAATGAAACTTTTGAAACAATATGAATAGGTAGGTTCTAATTTTTCCTTGTAGGGTACGGGGAGAAAACTTTTCCCTATTGGCTAAACGGGGACAAGAATAAGGAATGTTTCTTGTCCCCGTCTGGGCTCCCTTCTTCATCTTTGTCTTGATTTTTATTATTATTTATGTTTGAACTATTTTAGACTTTGTTTTTTGTTTTTGTTTTTTTTTGTTTTATGTTTTTTTGGTTTTATGACATATATTTTTTAGTTGCTTGAACTTTGAACCGTTTGAGACTACATCGTAATATTTAAATTTAAACTTTTAGGAATTATGGTGACCATTTTAACTATATCTTAATCATTTAAATAGAGATTTTTAACAAGAATTCTTTCTATTTCATTGAAATTTAAAAATAAATAATGGATAATGATTTTTCTAAAAAAAATCCAATCCATGCTAATTTTTTTGTCGGGAATCCCTACCCTGATTCTCGTGAAATTTAATGAAAAAAATTCCGTGAGGTTGGAGAATTAAATAAGGGGTAGGGATAAAGATGGAAAAGTCATCCCCGTTTCCACATACTATCGTGAACATTTTGAGATATGGGTAAAATTGAAAGACGATGTTGATACCAAAATCCGGACAGGGAGAACTCACCTTACCTTCATGTGCCACCAACGGTAAATTTGTTTGATGGGGGAAGACGTGGCTGCAAGACAAGGAAACCTGCACACTCATGTGGTGCTTGCCATACCGCCTTCGATGCTTAAGTCAGCAAGGAATAAGATGAGAGAGCAAGAGAGCAAGAGGAGAAGTAGAGTTCAGGATCTCTTCTTCAATGACGAAGAAGGGTTTATATATCTTTCCCTGTTTTAGGGTTTCCAAGCATTTGAAGACGATTCGGGGCTGAACCAAGTCGAACCGGACTGACCCAAGACACCAGAAGCTGAACGAAGGGAAAGGGACCCGACCTACTGGAGTGGGCCGAGGGTCGGCCTCGACCTCCATGTAGTTGGGCCAGCCCGACTCCTTTGGTCTTTCTCTCCTTCGAGCCCGTTTCCTGGTCGTATCCTCGGATTTGTGCTGTGTTGTCCTCGTCTGCTCCTTACGTTTCGGAGTGGTCCAAAATTACTTATAAATCATATAATTCAGTATCATTTGGCCTAAAATTACAATTAGTTCAAATTCAAAATATTTGTTTAGGTTAAATAAAAAATTTTATCCCTTAGTTTGGGCATCATTTGAAATTCGCCTTTATGATTTCAAAGTTTTCAATTGAATGCTTGTGGTTTGGTCAAAATTTACTAATAATTTCAATAGTCAAATTTTACATCAAAATAATTAAGATAACGTTTTCATTTATTTGACCAACAATAATTGCCCGATTATATTAGGTATAGTGTTGAATAAAAATAGAAAAAAATAGAAAAAAATAGATAAACTTTTTCATGTGGGTAAAAATAAGAAAAATTTGTGAGTTTAACTAATCTACAGAGACTCAAAATTGAAATTAAACAAAAAAAAAAAGGAAAAAAAAAAAACTCAAATTGAGAATTTAAAAAATACAGTGATTAAATTTGTAATTTATCAAGGTTAAAATAATTTTTTTTAATGCTTAAAATATTATTTTTGTTATTATACTTTTAAATATCTAAATTTTTTTCTCGTACTTTTACTAAATCTTTAAACTAGTCACTATTATTGTTAATCTATGGTTAAAAAAAATCATCTCTATCAACCTTCCCTAAGTTGTGAAAACATATTCACATTTCATTTTTTGAATGAAAAAAAATTATTATTATTAAATCTTACAAATAGTTTTTGCTATAGGCAATTTTGGATCACCCCAATGTACAAGGAGCTGACGAGGACAACCGGGGAAAAATCGGGCTGGGAGATGGATCCAGGAGGCGAAACCGGCAAGTGGGACGAGCCAAGACCGAAGGGGCCAGGTTTTTGGCCCGACCCCTTGCTCGGCCTCGGCCATGGGCCGAGGCTGCCGCCTCTGGCCGCCCCGGTTCCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGGTATTTACACCCCTCTTCGCCACTGAAGAAGGGGACCCGAACTCAATTCTCGACTCTCTTCTCTTACTCTCTTGCTCTCCTCTTCCGTTTTCTGACTAAAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTACTCTTTTGCAGGCCACGTCTTCCCCCGCTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAGGTAA

mRNA sequence

ATGCAAGGAGCTGAGAAGGACAGTGCAATACCAACCCAAGGAGACAACCAAGAAACGGGCCCCGGAGGAAGAACAAGCCAAAGGGTCGGACCAAGGTCGGAGGGATCGGGCCTTGGCCCAACCCATATGGTCGGCCTCGACCCACTTGTGTGGGTCGAGTCCTTCCGCCTCCGTTCAGTCCCTACTGTCCCTGCCCGTCCTGGTTCCACTCGGTCACGTCTTTCCCATCTTCAACAAATTCACTGCTGGTGTCACGTGAAGGTCAGAACTAGAACAACGAACCTCCGGTGGCCGCAGGACATCGGATTCCGACGAAATTACTGTAAACGTGCCGGCGACTGTTCTGATAACGAGAGATTGAATTTGATTGCGGCTCGTTTCAGCTATGAAGATCGGACCGAGAACGAGAGCGAGATTTCGCCGGGCGGGATTCGAATTCCGAAATCCGAAATGTTGCGGCGGAGGACGGCCGGAAAATCCAAACTCGGCTCATTCTCCGAAATCTTTGCTCCGGCGGCGGCGGTGGTCGAGTTGAGAAGGAGGAGGCGCAGGCGAATTGGGTTCTCTTATGGAGGTTTGTTTATGAGACTTTTGAACAAGGAGACCGATCCAGGGGACGAACCGACCAAAGGGTCGGGCCAGCTTGGCCCGACCCATATGGTCGGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGCCCCTGATGCCTCTAGCCGCCCCGGTTTCGTCTGGTTTGTCTCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGCATCAGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTACTCTTTTGCAGGCCACGTCTTCCCCCGCTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAGGCAATTTTGGATCACCCCAATGTACAAGGAGCTGACGAGGACAACCGGGGAAAAATCGGGCTGGGAGATGGATCCAGGAGGCGAAACCGGCAAGTGGGACGAGCCAAGACCGAAGGGGCCAGGTTTTTGGCCCGACCCCTTGCTCGGCCTCGGCCATGGGCCGAGGCTGCCGCCTCTGGCCGCCCCGGTTCCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGGTATTTACACCCCTCTTCGCCACTGAAGAAGGGGACCCGAACTCAATTCTCGACTCTCTTCTCTTACTCTCTTGCTCTCCTCTTCCGTTTTCTGACTAAAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTACTCTTTTGCAGGCCACGTCTTCCCCCGCTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAGGTAA

Coding sequence (CDS)

ATGCAAGGAGCTGAGAAGGACAGTGCAATACCAACCCAAGGAGACAACCAAGAAACGGGCCCCGGAGGAAGAACAAGCCAAAGGGTCGGACCAAGGTCGGAGGGATCGGGCCTTGGCCCAACCCATATGGTCGGCCTCGACCCACTTGTGTGGGTCGAGTCCTTCCGCCTCCGTTCAGTCCCTACTGTCCCTGCCCGTCCTGGTTCCACTCGGTCACGTCTTTCCCATCTTCAACAAATTCACTGCTGGTGTCACGTGAAGGTCAGAACTAGAACAACGAACCTCCGGTGGCCGCAGGACATCGGATTCCGACGAAATTACTGTAAACGTGCCGGCGACTGTTCTGATAACGAGAGATTGAATTTGATTGCGGCTCGTTTCAGCTATGAAGATCGGACCGAGAACGAGAGCGAGATTTCGCCGGGCGGGATTCGAATTCCGAAATCCGAAATGTTGCGGCGGAGGACGGCCGGAAAATCCAAACTCGGCTCATTCTCCGAAATCTTTGCTCCGGCGGCGGCGGTGGTCGAGTTGAGAAGGAGGAGGCGCAGGCGAATTGGGTTCTCTTATGGAGGTTTGTTTATGAGACTTTTGAACAAGGAGACCGATCCAGGGGACGAACCGACCAAAGGGTCGGGCCAGCTTGGCCCGACCCATATGGTCGGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGCCCCTGATGCCTCTAGCCGCCCCGGTTTCGTCTGGTTTGTCTCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGCATCAGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTACTCTTTTGCAGGCCACGTCTTCCCCCGCTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAGGCAATTTTGGATCACCCCAATGTACAAGGAGCTGACGAGGACAACCGGGGAAAAATCGGGCTGGGAGATGGATCCAGGAGGCGAAACCGGCAAGTGGGACGAGCCAAGACCGAAGGGGCCAGGTTTTTGGCCCGACCCCTTGCTCGGCCTCGGCCATGGGCCGAGGCTGCCGCCTCTGGCCGCCCCGGTTCCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGGTATTTACACCCCTCTTCGCCACTGAAGAAGGGGACCCGAACTCAATTCTCGACTCTCTTCTCTTACTCTCTTGCTCTCCTCTTCCGTTTTCTGACTAAAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTACTCTTTTGCAGGCCACGTCTTCCCCCGCTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAGGTAA

Protein sequence

MQGAEKDSAIPTQGDNQETGPGGRTSQRVGPRSEGSGLGPTHMVGLDPLVWVESFRLRSVPTVPARPGSTRSRLSHLQQIHCWCHVKVRTRTTNLRWPQDIGFRRNYCKRAGDCSDNERLNLIAARFSYEDRTENESEISPGGIRIPKSEMLRRRTAGKSKLGSFSEIFAPAAAVVELRRRRRRRIGFSYGGLFMRLLNKETDPGDEPTKGSGQLGPTHMVGPLARAELGHLLSAPDASSRPGFVWFVSKRLRIPKNPRSTSSIRGGVASTTPVCRFTLLQATSSPALKQIHCRLSRGAKAILDHPNVQGADEDNRGKIGLGDGSRRRNRQVGRAKTEGARFLARPLARPRPWAEAAASGRPGSAWFVPKRLRIPKNPRSMSRYLHPSSPLKKGTRTQFSTLFSYSLALLFRFLTKASEAVWLAPHRCAGLLFCRPRLPPLSNKFTVDYHVERR
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..338

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg012873.1Spg012873.1mRNA