Spg012829 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg012829
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	PRA1 family protein
Location	scaffold1: 15964222 .. 15964854 (-)
RNA-Seq Expression	Spg012829
Synteny	Spg012829

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTCTCCTTCTCCGGCCATCCTCCCCATTTCCACTTCCCAATCCCAATCCCAATCCCAACCCCAACCCCAACCCCCAGTCCCCCTCTCCTCCTTCACCAGCCACCTCCTCCTCTCCCTCCGCCACGCCCTCGCCCGCCGCCGCCCCTGGCCGGAGCTCCTCGACCGCTCCGCCTTCTCCAAGCCCGAATCCCTCTCCGAAGCCACTCTCCGGATCCGCAAAAACTACTCCTATTTCCGCGTCAATTATTTCTCCATCGTAGCCCTAATTCTTGCCATCTCTCTTTTCTCCAATCCGTCCTCTCTCTTCCTCTTAATCGCGCTTCTCTCCTCTTGGATCTTCCTCTACCTCTTCCGCCCCTCCGATCAGCCGCTCGTTCTGTTCGGCCGGCTCTTCAGGGACAGCGAGATCTTGATTGGCCTCGTTGTTTTCACCGCCTGTGTTATCTTCCTCACCAGCGTCGGATCGGTTCTTGTTTCCGCCCTCACCGCCGGCGCCGGCGTCGTCTGCGCTCACGGCGCTCTCCGATCTCCCGATGATCTCTTCCTTGATGAGCAGGAAGTTAACTCCACTGGCTTTCTTGGTTTCTTCGCCGGCGGCCCTTCCTCCGCCGCTCCTTCCGGCATGTAA

mRNA sequence

ATGCCGTCTCCTTCTCCGGCCATCCTCCCCATTTCCACTTCCCAATCCCAATCCCAATCCCAACCCCAACCCCAACCCCCAGTCCCCCTCTCCTCCTTCACCAGCCACCTCCTCCTCTCCCTCCGCCACGCCCTCGCCCGCCGCCGCCCCTGGCCGGAGCTCCTCGACCGCTCCGCCTTCTCCAAGCCCGAATCCCTCTCCGAAGCCACTCTCCGGATCCGCAAAAACTACTCCTATTTCCGCGTCAATTATTTCTCCATCGTAGCCCTAATTCTTGCCATCTCTCTTTTCTCCAATCCGTCCTCTCTCTTCCTCTTAATCGCGCTTCTCTCCTCTTGGATCTTCCTCTACCTCTTCCGCCCCTCCGATCAGCCGCTCGTTCTGTTCGGCCGGCTCTTCAGGGACAGCGAGATCTTGATTGGCCTCGTTGTTTTCACCGCCTGTGTTATCTTCCTCACCAGCGTCGGATCGGTTCTTGTTTCCGCCCTCACCGCCGGCGCCGGCGTCGTCTGCGCTCACGGCGCTCTCCGATCTCCCGATGATCTCTTCCTTGATGAGCAGGAAGTTAACTCCACTGGCTTTCTTGGTTTCTTCGCCGGCGGCCCTTCCTCCGCCGCTCCTTCCGGCATGTAA

Coding sequence (CDS)

ATGCCGTCTCCTTCTCCGGCCATCCTCCCCATTTCCACTTCCCAATCCCAATCCCAATCCCAACCCCAACCCCAACCCCCAGTCCCCCTCTCCTCCTTCACCAGCCACCTCCTCCTCTCCCTCCGCCACGCCCTCGCCCGCCGCCGCCCCTGGCCGGAGCTCCTCGACCGCTCCGCCTTCTCCAAGCCCGAATCCCTCTCCGAAGCCACTCTCCGGATCCGCAAAAACTACTCCTATTTCCGCGTCAATTATTTCTCCATCGTAGCCCTAATTCTTGCCATCTCTCTTTTCTCCAATCCGTCCTCTCTCTTCCTCTTAATCGCGCTTCTCTCCTCTTGGATCTTCCTCTACCTCTTCCGCCCCTCCGATCAGCCGCTCGTTCTGTTCGGCCGGCTCTTCAGGGACAGCGAGATCTTGATTGGCCTCGTTGTTTTCACCGCCTGTGTTATCTTCCTCACCAGCGTCGGATCGGTTCTTGTTTCCGCCCTCACCGCCGGCGCCGGCGTCGTCTGCGCTCACGGCGCTCTCCGATCTCCCGATGATCTCTTCCTTGATGAGCAGGAAGTTAACTCCACTGGCTTTCTTGGTTTCTTCGCCGGCGGCCCTTCCTCCGCCGCTCCTTCCGGCATGTAA

Protein sequence

MPSPSPAILPISTSQSQSQSQPQPQPPVPLSSFTSHLLLSLRHALARRRPWPELLDRSAFSKPESLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHGALRSPDDLFLDEQEVNSTGFLGFFAGGPSSAAPSGM

Homology

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BLAST of Spg012829 vs. NCBI nr
Match: XP_022949813.1 (PRA1 family protein B2-like [Cucurbita moschata] >KAG6603559.1 PRA1 family protein B4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033749.1 PRA1 family protein B4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 331.6 bits (849), Expect = 4.8e-87
Identity = 182/212 (85.85%), Postives = 190/212 (89.62%), Query Frame = 0


Query: 1   MPSPSPAILPISTSQSQSQSQPQPQPPVPLSSFTSHLLLSLRHALARRRPWPELLDRSAF 60
           MPS SPAILP+S S+S        QP +PLSSF SHL LSLRHA +RRRPWPELLDRSAF
Sbjct: 1   MPSSSPAILPVSNSES--------QPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAF 60

Query: 61  SKPESLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWIFLYLFR 120
           SKPESLSEATLRIRKNY+YFRVNYF+I+ALILA S FSNPSSLFLLIALLSSWIFLYLFR
Sbjct: 61  SKPESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFR 120

Query: 121 PSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHGALRSPD 180
           PSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVS+LTAGA VVCAHGALRSPD
Sbjct: 121 PSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPD 180

Query: 181 DLFLDEQEVNSTGFLGFFAGGPS---SAAPSG 210
           DLFLDEQEVNSTGFLG FAG PS   SAAPSG
Sbjct: 181 DLFLDEQEVNSTGFLGLFAGAPSAAASAAPSG 204

[Close]

BLAST of Spg012829 vs. NCBI nr
Match: XP_023544736.1 (PRA1 family protein B2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.5 bits (846), Expect = 1.1e-86
Identity = 181/213 (84.98%), Postives = 190/213 (89.20%), Query Frame = 0


Query: 1   MPSPSPAILPISTSQSQSQSQPQPQPPVPLSSFTSHLLLSLRHALARRRPWPELLDRSAF 60
           MPS SPAILP+S S+S        QP +PLSSF SH+ LSLRHA +RRRPWPELLDRSAF
Sbjct: 1   MPSSSPAILPVSNSES--------QPQIPLSSFASHIFLSLRHAFSRRRPWPELLDRSAF 60

Query: 61  SKPESLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWIFLYLFR 120
           SKPESLSEATLRIRKNY+YFRVNYF+I+ALILA S FSNPSSLFLLIALLSSWIFLYLFR
Sbjct: 61  SKPESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFR 120

Query: 121 PSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHGALRSPD 180
           PSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVS+LTAGA VVCAHGALRSPD
Sbjct: 121 PSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPD 180

Query: 181 DLFLDEQEVNSTGFLGFFAGGPS----SAAPSG 210
           DLFLDEQEVNSTGFLG FAG PS    SAAPSG
Sbjct: 181 DLFLDEQEVNSTGFLGLFAGAPSAAAASAAPSG 205

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BLAST of Spg012829 vs. NCBI nr
Match: XP_022978285.1 (PRA1 family protein B2-like [Cucurbita maxima])

HSP 1 Score: 330.1 bits (845), Expect = 1.4e-86
Identity = 180/212 (84.91%), Postives = 190/212 (89.62%), Query Frame = 0


Query: 1   MPSPSPAILPISTSQSQSQSQPQPQPPVPLSSFTSHLLLSLRHALARRRPWPELLDRSAF 60
           MPS SPAILP+S S+S        QP +PLSSF SHL LSLRHA +RRRPWPELLDRSAF
Sbjct: 1   MPSSSPAILPVSNSES--------QPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAF 60

Query: 61  SKPESLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWIFLYLFR 120
           SKPESLSEATLRIRKNY+YFRVNYF+I+ALILA S FSNPSSLFLLIALLSSWIFLYLFR
Sbjct: 61  SKPESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFR 120

Query: 121 PSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHGALRSPD 180
           PSDQPLVLFGRLFRDSEILIGLVVFTAC+IFLTSVGSVLVS+LTAGA VVCAHGALRSPD
Sbjct: 121 PSDQPLVLFGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPD 180

Query: 181 DLFLDEQEVNSTGFLGFFAGGPSSA---APSG 210
           DLFLDEQEVNSTGFLG FAG PS+A   APSG
Sbjct: 181 DLFLDEQEVNSTGFLGLFAGAPSAAAATAPSG 204

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BLAST of Spg012829 vs. NCBI nr
Match: XP_008464234.1 (PREDICTED: PRA1 family protein B2 [Cucumis melo] >KAA0037713.1 PRA1 family protein B2 [Cucumis melo var. makuwa] >TYK10948.1 PRA1 family protein B2 [Cucumis melo var. makuwa])

HSP 1 Score: 328.6 bits (841), Expect = 4.0e-86
Identity = 181/211 (85.78%), Postives = 189/211 (89.57%), Query Frame = 0


Query: 1   MPSPSPAILPISTSQSQSQSQPQPQPPVPLSSFTSHLLLSLRHALARRRPWPELLDRSAF 60
           M SPSPAILPI        S PQ QP +PLSSF+SHLLLSLRHA +RRRPWPELLDRSAF
Sbjct: 1   MQSPSPAILPI--------SNPQSQPHIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAF 60

Query: 61  SKPESLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWIFLYLFR 120
           SKPESL+EATLRIRKNYSYFRVNYF+I+ALILAISLFSNPSSLFLLIALL SWIFLYLFR
Sbjct: 61  SKPESLTEATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFR 120

Query: 121 PSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHGALRSPD 180
           PSDQPLVLFGRLFRDSEILIGL+VFTACV+F TSVGSVLVSALTAG  VVCAHGALRSPD
Sbjct: 121 PSDQPLVLFGRLFRDSEILIGLLVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPD 180

Query: 181 DLFLDEQEVNSTGFLGFFAGGPSS---AAPS 209
           DLFLDEQEVNSTGFLG FAG PSS   AAPS
Sbjct: 181 DLFLDEQEVNSTGFLGIFAGPPSSSSAAAPS 203

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BLAST of Spg012829 vs. NCBI nr
Match: KAE8649576.1 (hypothetical protein Csa_021551 [Cucumis sativus])

HSP 1 Score: 322.0 bits (824), Expect = 3.8e-84
Identity = 175/206 (84.95%), Postives = 184/206 (89.32%), Query Frame = 0


Query: 3   SPSPAILPISTSQSQSQSQPQPQPPVPLSSFTSHLLLSLRHALARRRPWPELLDRSAFSK 62
           S SP ILPI        S PQ QP +PLSSF+SHLLLSLRHA +RRRPWPELLDRSAFSK
Sbjct: 105 SASPVILPI--------SNPQSQPQIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSK 164

Query: 63  PESLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWIFLYLFRPS 122
           PESLSEATLRIRKNYSYFRVNYF+I+ALILAISLFSNPSSLFLLIALL SWIFLYLFRPS
Sbjct: 165 PESLSEATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPS 224

Query: 123 DQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHGALRSPDDL 182
           DQPLVLFGR FRDSEILIGLVVFTACV+FLTSVGSVLVSA TAG  VVCAHGALRSPDDL
Sbjct: 225 DQPLVLFGRHFRDSEILIGLVVFTACVVFLTSVGSVLVSAFTAGFAVVCAHGALRSPDDL 284

Query: 183 FLDEQEVNSTGFLGFFAGGPSSAAPS 209
           FLDEQEVN+TGFLG FAG PSS++ S
Sbjct: 285 FLDEQEVNTTGFLGIFAGAPSSSSSS 302

[Close]

BLAST of Spg012829 vs. ExPASy Swiss-Prot
Match: O80915 (PRA1 family protein B4 OS=Arabidopsis thaliana OX=3702 GN=PRA1B4 PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.2e-54
Identity = 116/214 (54.21%), Postives = 154/214 (71.96%), Query Frame = 0


Query: 1   MPSPSPAILPISTSQ---SQSQSQPQPQPPV---PLSSFTSHLLLSLRHALARRRPWPEL 60
           M S +P +LPIS  Q   S + S  + QPP+      +F + +  ++++ L++RRPW EL
Sbjct: 1   MASSAPPVLPISNPQTVPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAEL 60

Query: 61  LDRSAFSKPESLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWI 120
            DRSA SKPES+S+A +RIRKNYSYF+VNY ++   I+  SL ++P SL  L+ LL+SW+
Sbjct: 61  ADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWL 120

Query: 121 FLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHG 180
           FLYLFRP+DQP+VLFGR F D E L  L++F+  VIFLT VGSVLVSA+  G  ++CAHG
Sbjct: 121 FLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHG 180

Query: 181 ALRSPDDLFLDEQEVNSTGFLGFFAGGPSSAAPS 209
           A R+P+DLFLDEQE  +TGFL F  G  SSAAP+
Sbjct: 181 AFRAPEDLFLDEQEPAATGFLSFLGGAASSAAPA 214

[Close]

BLAST of Spg012829 vs. ExPASy Swiss-Prot
Match: Q9SIY7 (PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.6e-53
Identity = 116/208 (55.77%), Postives = 154/208 (74.04%), Query Frame = 0


Query: 3   SPSPAILPISTSQSQSQSQPQPQPPVPLSSFTSHLLLSLRHALARRRPWPELLDRSAFSK 62
           S SPAILP++  Q+ +QSQP P       +F S L  SLR +L++RRPW EL+DRS+F++
Sbjct: 2   SSSPAILPVTNQQAATQSQP-PINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFAR 61

Query: 63  PESLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWIFLYLFRPS 122
           P+SL+++  RIRKN +YF+VNY +IV+L+LA SL S+P SL +L++LL SW+FLYLFR S
Sbjct: 62  PDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSS 121

Query: 123 DQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHGALRSPDDL 182
           DQPLVLFGR F D E L+GLV+ T  V+F+TSVGS+L SALT G  +VC HGA R PDDL
Sbjct: 122 DQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDL 181

Query: 183 FLDEQEVNSTGFLGFFAGGPSSAAPSGM 211
           FLDEQE  + G L F     +++A + +
Sbjct: 182 FLDEQEPANAGLLSFIGNSAATSAAASV 208

[Close]

BLAST of Spg012829 vs. ExPASy Swiss-Prot
Match: Q9LYN0 (PRA1 family protein B1 OS=Arabidopsis thaliana OX=3702 GN=PRA1B1 PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 6.8e-52
Identity = 114/202 (56.44%), Postives = 144/202 (71.29%), Query Frame = 0


Query: 5   SPAILPISTSQSQSQSQPQPQPPVPLSSFTSHLLLSLRHALARRRPWPELLDRSAFSKPE 64
           +P  LP+ T+Q   QSQP    P    +F S L  S+R  L++RRPW EL+DRS+ ++PE
Sbjct: 3   TPPTLPV-TNQQAVQSQPPINTPA-FRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPE 62

Query: 65  SLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQ 124
           SL++A  RIRKN +YF+VNY +IV+L+LA SLFS+P SL +LI LL  W+FLYLFRPSDQ
Sbjct: 63  SLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQ 122

Query: 125 PLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHGALRSPDDLFL 184
           PLV+FGR F D E L+ LV+ T  V+F+TSVGS+L SAL  G  +VC HGA   PDDLFL
Sbjct: 123 PLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFL 182

Query: 185 DEQEVNSTGFLGFFAGGPSSAA 207
           DEQE  + G L F  G  +SAA
Sbjct: 183 DEQEPANAGLLSFLGGSATSAA 202

[Close]

BLAST of Spg012829 vs. ExPASy Swiss-Prot
Match: Q9M012 (PRA1 family protein B5 OS=Arabidopsis thaliana OX=3702 GN=PRA1B5 PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.0e-51
Identity = 121/217 (55.76%), Postives = 154/217 (70.97%), Query Frame = 0


Query: 1   MPSPSPAILPISTSQSQSQSQP-------QPQPPVPLSSFTSHLLLSLRHALARRRPWPE 60
           M S +P +LPIST+ + + +QP       + QPPV + +F + +  ++   L+R RPW E
Sbjct: 1   MVSTNPPVLPISTTATDTTNQPPIVTAVVESQPPV-VRAFVNGVTETVCGGLSRSRPWSE 60

Query: 61  LLDRSAFSKPESLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSW 120
           LLDRSAF+KP+SLSEA  R RKN SYFRVNY  IVALIL  SL ++P SL LL+ L +SW
Sbjct: 61  LLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASW 120

Query: 121 IFLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAH 180
           +FLYLFRPSD+PL+LFGR F + E L GL++ T  VIF TSVGSVL+SAL  G   +C H
Sbjct: 121 LFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVH 180

Query: 181 GALRSPDDLFLDEQEVNSTGFLGFFAGGPS--SAAPS 209
           GA R+PDDLFLDEQ+  ++GFL F  G P+  S APS
Sbjct: 181 GAFRAPDDLFLDEQDHAASGFLSFI-GVPAIPSVAPS 215

[Close]

BLAST of Spg012829 vs. ExPASy Swiss-Prot
Match: Q9FLB6 (PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.3e-50
Identity = 111/202 (54.95%), Postives = 141/202 (69.80%), Query Frame = 0


Query: 5   SPAILPISTSQSQSQSQPQPQPPVPLSSFTSHLLLSLRHALARRRPWPELLDRSAFSKPE 64
           +P  LPIS          QP       +F S L  S+R +L++RRPW EL+DRSA S+PE
Sbjct: 4   NPPTLPISDHSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPE 63

Query: 65  SLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQ 124
           SL++A  RIR+N  YF+VNY +IV+L+LA+SL S+P SL +L+ L  +WIFLYLFRPSDQ
Sbjct: 64  SLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQ 123

Query: 125 PLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHGALRSPDDLFL 184
           PLV+ GR F D E L  LV+ T  V+FLTSVGS+L SAL  G G+VC HGA R P+DLFL
Sbjct: 124 PLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFL 183

Query: 185 DEQEVNSTGFLGFFAGGPSSAA 207
           D+QE  +TG L F +G  +SAA
Sbjct: 184 DDQEPANTGLLSFLSGAATSAA 205

[Close]

BLAST of Spg012829 vs. ExPASy TrEMBL
Match: A0A6J1GD57 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111453097 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.3e-87
Identity = 182/212 (85.85%), Postives = 190/212 (89.62%), Query Frame = 0


Query: 1   MPSPSPAILPISTSQSQSQSQPQPQPPVPLSSFTSHLLLSLRHALARRRPWPELLDRSAF 60
           MPS SPAILP+S S+S        QP +PLSSF SHL LSLRHA +RRRPWPELLDRSAF
Sbjct: 1   MPSSSPAILPVSNSES--------QPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAF 60

Query: 61  SKPESLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWIFLYLFR 120
           SKPESLSEATLRIRKNY+YFRVNYF+I+ALILA S FSNPSSLFLLIALLSSWIFLYLFR
Sbjct: 61  SKPESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFR 120

Query: 121 PSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHGALRSPD 180
           PSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVS+LTAGA VVCAHGALRSPD
Sbjct: 121 PSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSSLTAGAAVVCAHGALRSPD 180

Query: 181 DLFLDEQEVNSTGFLGFFAGGPS---SAAPSG 210
           DLFLDEQEVNSTGFLG FAG PS   SAAPSG
Sbjct: 181 DLFLDEQEVNSTGFLGLFAGAPSAAASAAPSG 204

[Close]

BLAST of Spg012829 vs. ExPASy TrEMBL
Match: A0A6J1IPN2 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111478318 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 6.7e-87
Identity = 180/212 (84.91%), Postives = 190/212 (89.62%), Query Frame = 0


Query: 1   MPSPSPAILPISTSQSQSQSQPQPQPPVPLSSFTSHLLLSLRHALARRRPWPELLDRSAF 60
           MPS SPAILP+S S+S        QP +PLSSF SHL LSLRHA +RRRPWPELLDRSAF
Sbjct: 1   MPSSSPAILPVSNSES--------QPQIPLSSFASHLFLSLRHAFSRRRPWPELLDRSAF 60

Query: 61  SKPESLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWIFLYLFR 120
           SKPESLSEATLRIRKNY+YFRVNYF+I+ALILA S FSNPSSLFLLIALLSSWIFLYLFR
Sbjct: 61  SKPESLSEATLRIRKNYTYFRVNYFAIIALILAFSFFSNPSSLFLLIALLSSWIFLYLFR 120

Query: 121 PSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHGALRSPD 180
           PSDQPLVLFGRLFRDSEILIGLVVFTAC+IFLTSVGSVLVS+LTAGA VVCAHGALRSPD
Sbjct: 121 PSDQPLVLFGRLFRDSEILIGLVVFTACIIFLTSVGSVLVSSLTAGAAVVCAHGALRSPD 180

Query: 181 DLFLDEQEVNSTGFLGFFAGGPSSA---APSG 210
           DLFLDEQEVNSTGFLG FAG PS+A   APSG
Sbjct: 181 DLFLDEQEVNSTGFLGLFAGAPSAAAATAPSG 204

[Close]

BLAST of Spg012829 vs. ExPASy TrEMBL
Match: A0A5D3CIC6 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00310 PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 2.0e-86
Identity = 181/211 (85.78%), Postives = 189/211 (89.57%), Query Frame = 0


Query: 1   MPSPSPAILPISTSQSQSQSQPQPQPPVPLSSFTSHLLLSLRHALARRRPWPELLDRSAF 60
           M SPSPAILPI        S PQ QP +PLSSF+SHLLLSLRHA +RRRPWPELLDRSAF
Sbjct: 1   MQSPSPAILPI--------SNPQSQPHIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAF 60

Query: 61  SKPESLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWIFLYLFR 120
           SKPESL+EATLRIRKNYSYFRVNYF+I+ALILAISLFSNPSSLFLLIALL SWIFLYLFR
Sbjct: 61  SKPESLTEATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFR 120

Query: 121 PSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHGALRSPD 180
           PSDQPLVLFGRLFRDSEILIGL+VFTACV+F TSVGSVLVSALTAG  VVCAHGALRSPD
Sbjct: 121 PSDQPLVLFGRLFRDSEILIGLLVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPD 180

Query: 181 DLFLDEQEVNSTGFLGFFAGGPSS---AAPS 209
           DLFLDEQEVNSTGFLG FAG PSS   AAPS
Sbjct: 181 DLFLDEQEVNSTGFLGIFAGPPSSSSAAAPS 203

[Close]

BLAST of Spg012829 vs. ExPASy TrEMBL
Match: A0A1S3CMI9 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103502166 PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 2.0e-86
Identity = 181/211 (85.78%), Postives = 189/211 (89.57%), Query Frame = 0


Query: 1   MPSPSPAILPISTSQSQSQSQPQPQPPVPLSSFTSHLLLSLRHALARRRPWPELLDRSAF 60
           M SPSPAILPI        S PQ QP +PLSSF+SHLLLSLRHA +RRRPWPELLDRSAF
Sbjct: 1   MQSPSPAILPI--------SNPQSQPHIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAF 60

Query: 61  SKPESLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWIFLYLFR 120
           SKPESL+EATLRIRKNYSYFRVNYF+I+ALILAISLFSNPSSLFLLIALL SWIFLYLFR
Sbjct: 61  SKPESLTEATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFR 120

Query: 121 PSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHGALRSPD 180
           PSDQPLVLFGRLFRDSEILIGL+VFTACV+F TSVGSVLVSALTAG  VVCAHGALRSPD
Sbjct: 121 PSDQPLVLFGRLFRDSEILIGLLVFTACVVFFTSVGSVLVSALTAGVAVVCAHGALRSPD 180

Query: 181 DLFLDEQEVNSTGFLGFFAGGPSS---AAPS 209
           DLFLDEQEVNSTGFLG FAG PSS   AAPS
Sbjct: 181 DLFLDEQEVNSTGFLGIFAGPPSSSSAAAPS 203

[Close]

BLAST of Spg012829 vs. ExPASy TrEMBL
Match: A0A0A0KXP8 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G314420 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.8e-84
Identity = 175/206 (84.95%), Postives = 184/206 (89.32%), Query Frame = 0


Query: 3   SPSPAILPISTSQSQSQSQPQPQPPVPLSSFTSHLLLSLRHALARRRPWPELLDRSAFSK 62
           S SP ILPI        S PQ QP +PLSSF+SHLLLSLRHA +RRRPWPELLDRSAFSK
Sbjct: 4   SASPVILPI--------SNPQSQPQIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSK 63

Query: 63  PESLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWIFLYLFRPS 122
           PESLSEATLRIRKNYSYFRVNYF+I+ALILAISLFSNPSSLFLLIALL SWIFLYLFRPS
Sbjct: 64  PESLSEATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPS 123

Query: 123 DQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHGALRSPDDL 182
           DQPLVLFGR FRDSEILIGLVVFTACV+FLTSVGSVLVSA TAG  VVCAHGALRSPDDL
Sbjct: 124 DQPLVLFGRHFRDSEILIGLVVFTACVVFLTSVGSVLVSAFTAGFAVVCAHGALRSPDDL 183

Query: 183 FLDEQEVNSTGFLGFFAGGPSSAAPS 209
           FLDEQEVN+TGFLG FAG PSS++ S
Sbjct: 184 FLDEQEVNTTGFLGIFAGAPSSSSSS 201

[Close]

BLAST of Spg012829 vs. TAIR 10
Match: AT2G38360.1 (prenylated RAB acceptor 1.B4 )

HSP 1 Score: 212.6 bits (540), Expect = 3.0e-55
Identity = 116/214 (54.21%), Postives = 154/214 (71.96%), Query Frame = 0


Query: 1   MPSPSPAILPISTSQ---SQSQSQPQPQPPV---PLSSFTSHLLLSLRHALARRRPWPEL 60
           M S +P +LPIS  Q   S + S  + QPP+      +F + +  ++++ L++RRPW EL
Sbjct: 1   MASSAPPVLPISNPQTVPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAEL 60

Query: 61  LDRSAFSKPESLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWI 120
            DRSA SKPES+S+A +RIRKNYSYF+VNY ++   I+  SL ++P SL  L+ LL+SW+
Sbjct: 61  ADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWL 120

Query: 121 FLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHG 180
           FLYLFRP+DQP+VLFGR F D E L  L++F+  VIFLT VGSVLVSA+  G  ++CAHG
Sbjct: 121 FLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHG 180

Query: 181 ALRSPDDLFLDEQEVNSTGFLGFFAGGPSSAAPS 209
           A R+P+DLFLDEQE  +TGFL F  G  SSAAP+
Sbjct: 181 AFRAPEDLFLDEQEPAATGFLSFLGGAASSAAPA 214

[Close]

BLAST of Spg012829 vs. TAIR 10
Match: AT2G40380.1 (prenylated RAB acceptor 1.B2 )

HSP 1 Score: 210.7 bits (535), Expect = 1.1e-54
Identity = 116/208 (55.77%), Postives = 154/208 (74.04%), Query Frame = 0


Query: 3   SPSPAILPISTSQSQSQSQPQPQPPVPLSSFTSHLLLSLRHALARRRPWPELLDRSAFSK 62
           S SPAILP++  Q+ +QSQP P       +F S L  SLR +L++RRPW EL+DRS+F++
Sbjct: 2   SSSPAILPVTNQQAATQSQP-PINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFAR 61

Query: 63  PESLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWIFLYLFRPS 122
           P+SL+++  RIRKN +YF+VNY +IV+L+LA SL S+P SL +L++LL SW+FLYLFR S
Sbjct: 62  PDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSS 121

Query: 123 DQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHGALRSPDDL 182
           DQPLVLFGR F D E L+GLV+ T  V+F+TSVGS+L SALT G  +VC HGA R PDDL
Sbjct: 122 DQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDL 181

Query: 183 FLDEQEVNSTGFLGFFAGGPSSAAPSGM 211
           FLDEQE  + G L F     +++A + +
Sbjct: 182 FLDEQEPANAGLLSFIGNSAATSAAASV 208

[Close]

BLAST of Spg012829 vs. TAIR 10
Match: AT3G56110.1 (prenylated RAB acceptor 1.B1 )

HSP 1 Score: 205.3 bits (521), Expect = 4.8e-53
Identity = 114/202 (56.44%), Postives = 144/202 (71.29%), Query Frame = 0


Query: 5   SPAILPISTSQSQSQSQPQPQPPVPLSSFTSHLLLSLRHALARRRPWPELLDRSAFSKPE 64
           +P  LP+ T+Q   QSQP    P    +F S L  S+R  L++RRPW EL+DRS+ ++PE
Sbjct: 3   TPPTLPV-TNQQAVQSQPPINTPA-FRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPE 62

Query: 65  SLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQ 124
           SL++A  RIRKN +YF+VNY +IV+L+LA SLFS+P SL +LI LL  W+FLYLFRPSDQ
Sbjct: 63  SLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQ 122

Query: 125 PLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHGALRSPDDLFL 184
           PLV+FGR F D E L+ LV+ T  V+F+TSVGS+L SAL  G  +VC HGA   PDDLFL
Sbjct: 123 PLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFL 182

Query: 185 DEQEVNSTGFLGFFAGGPSSAA 207
           DEQE  + G L F  G  +SAA
Sbjct: 183 DEQEPANAGLLSFLGGSATSAA 202

[Close]

BLAST of Spg012829 vs. TAIR 10
Match: AT3G56110.2 (prenylated RAB acceptor 1.B1 )

HSP 1 Score: 205.3 bits (521), Expect = 4.8e-53
Identity = 114/202 (56.44%), Postives = 144/202 (71.29%), Query Frame = 0


Query: 5   SPAILPISTSQSQSQSQPQPQPPVPLSSFTSHLLLSLRHALARRRPWPELLDRSAFSKPE 64
           +P  LP+ T+Q   QSQP    P    +F S L  S+R  L++RRPW EL+DRS+ ++PE
Sbjct: 3   TPPTLPV-TNQQAVQSQPPINTPA-FRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPE 62

Query: 65  SLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSWIFLYLFRPSDQ 124
           SL++A  RIRKN +YF+VNY +IV+L+LA SLFS+P SL +LI LL  W+FLYLFRPSDQ
Sbjct: 63  SLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQ 122

Query: 125 PLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAHGALRSPDDLFL 184
           PLV+FGR F D E L+ LV+ T  V+F+TSVGS+L SAL  G  +VC HGA   PDDLFL
Sbjct: 123 PLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFL 182

Query: 185 DEQEVNSTGFLGFFAGGPSSAA 207
           DEQE  + G L F  G  +SAA
Sbjct: 183 DEQEPANAGLLSFLGGSATSAA 202

[Close]

BLAST of Spg012829 vs. TAIR 10
Match: AT5G01640.1 (prenylated RAB acceptor 1.B5 )

HSP 1 Score: 203.8 bits (517), Expect = 1.4e-52
Identity = 121/217 (55.76%), Postives = 154/217 (70.97%), Query Frame = 0


Query: 1   MPSPSPAILPISTSQSQSQSQP-------QPQPPVPLSSFTSHLLLSLRHALARRRPWPE 60
           M S +P +LPIST+ + + +QP       + QPPV + +F + +  ++   L+R RPW E
Sbjct: 1   MVSTNPPVLPISTTATDTTNQPPIVTAVVESQPPV-VRAFVNGVTETVCGGLSRSRPWSE 60

Query: 61  LLDRSAFSKPESLSEATLRIRKNYSYFRVNYFSIVALILAISLFSNPSSLFLLIALLSSW 120
           LLDRSAF+KP+SLSEA  R RKN SYFRVNY  IVALIL  SL ++P SL LL+ L +SW
Sbjct: 61  LLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASW 120

Query: 121 IFLYLFRPSDQPLVLFGRLFRDSEILIGLVVFTACVIFLTSVGSVLVSALTAGAGVVCAH 180
           +FLYLFRPSD+PL+LFGR F + E L GL++ T  VIF TSVGSVL+SAL  G   +C H
Sbjct: 121 LFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVH 180

Query: 181 GALRSPDDLFLDEQEVNSTGFLGFFAGGPS--SAAPS 209
           GA R+PDDLFLDEQ+  ++GFL F  G P+  S APS
Sbjct: 181 GAFRAPDDLFLDEQDHAASGFLSFI-GVPAIPSVAPS 215

The following BLAST results are available for this feature:

BLAST of Spg012829 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949813.1	4.8e-87	85.85	PRA1 family protein B2-like [Cucurbita moschata] >KAG6603559.1 PRA1 family prote...	[more]
XP_023544736.1	1.1e-86	84.98	PRA1 family protein B2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022978285.1	1.4e-86	84.91	PRA1 family protein B2-like [Cucurbita maxima]	[more]
XP_008464234.1	4.0e-86	85.78	PREDICTED: PRA1 family protein B2 [Cucumis melo] >KAA0037713.1 PRA1 family prote...	[more]
KAE8649576.1	3.8e-84	84.95	hypothetical protein Csa_021551 [Cucumis sativus]	[more]

BLAST of Spg012829 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80915	4.2e-54	54.21	PRA1 family protein B4 OS=Arabidopsis thaliana OX=3702 GN=PRA1B4 PE=1 SV=1	[more]
Q9SIY7	1.6e-53	55.77	PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1	[more]
Q9LYN0	6.8e-52	56.44	PRA1 family protein B1 OS=Arabidopsis thaliana OX=3702 GN=PRA1B1 PE=1 SV=1	[more]
Q9M012	2.0e-51	55.76	PRA1 family protein B5 OS=Arabidopsis thaliana OX=3702 GN=PRA1B5 PE=1 SV=1	[more]
Q9FLB6	1.3e-50	54.95	PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1	[more]

BLAST of Spg012829 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GD57	2.3e-87	85.85	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111453097 PE=3 SV=1	[more]
A0A6J1IPN2	6.7e-87	84.91	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111478318 PE=3 SV=1	[more]
A0A5D3CIC6	2.0e-86	85.78	PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G...	[more]
A0A1S3CMI9	2.0e-86	85.78	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103502166 PE=3 SV=1	[more]
A0A0A0KXP8	1.8e-84	84.95	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G314420 PE=3 SV=1	[more]

BLAST of Spg012829 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38360.1	3.0e-55	54.21	prenylated RAB acceptor 1.B4	[more]
AT2G40380.1	1.1e-54	55.77	prenylated RAB acceptor 1.B2	[more]
AT3G56110.1	4.8e-53	56.44	prenylated RAB acceptor 1.B1	[more]
AT3G56110.2	4.8e-53	56.44	prenylated RAB acceptor 1.B1	[more]
AT5G01640.1	1.4e-52	55.76	prenylated RAB acceptor 1.B5	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 44..187 e-value: 6.1E-47 score: 158.9
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR19317:SF34	PRA1 FAMILY PROTEIN-RELATED	coord: 1..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg012829.1	Spg012829.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane