Spg012696 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg012696
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionglutaredoxin-C3
Locationscaffold1: 5633805 .. 5641979 (+)
RNA-Seq ExpressionSpg012696
SyntenySpg012696
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGGAATCCCGCTAAATGTGAAATTTCCAGGTTTTGGCTCATTTTGGAAATTTCCATGAACAACCAAAAATCGCAGCGAATCGATGATGAAAGATAGATGAAAGATATTGGTACCTTCTATTCATCTTCCTTATGGACGACCATCTCTCTTCTTTTAGGGTTCCGATTGCGAATTAGGATTTCGGTTGTTTTGCATTTGGAGGTTCTTGTTCGCGGCTTGATATGCACTTCCATTGCGATGCTGAAAGTTAAAGCTGTTGACCTCGTCAATTGATTGCCATCATTACGCTGCGATCTCTGATATTTATTAGCAGGGAATGGGATGATCTTAGCCAGAAAAATTAGGTCAATGGTCGCGTGAAACTTACGCGATATCAGTAAAAATTAAATTAAAACAAAATAATAATTGCGGATTTTTAATTTTAAAATCAGTTATCAACCTACATTACATCATACTTAATGAATTAGTAAAAAGTTAGAGAAAGAAAAAAGTCATCTTATAAAATAAACGTTTCCTAATTTTTCTACCAACATTTTAAGAGACTAGTAATCAACATTGTATGGAAATTTTTCCATAATTCTATCCCAACTAAGTTTAATCTATGGACTCATCATGTTCCGGTTAACGGGTATTGTCCTGTTTGTCAGGAGGAGATCGAGACTACAGATCATGTCCTTTTTCAATGTAAGAGAGATATGGGATCTAATTCATCCTTTGATGAATAAGAACCAATGGTGTCAAATGGACATAAAAGATCGTTGGTTGGATCTGATTGATAATCAAGGACAGGTCCTCGAGCGAATATGTGTGGGGGCATGGACTATTTGGAATGATAGAAATAGTTTGATTCATAATCGGCCAATCCCTGATGTAGTGACTCGATGTGAATGGATGGTCAGAGAAAGATGTTCTCAGAATCATATCAGGAGGAGAGGAGACTATTTTAAACACTGATGCGGCTTTCATGGGAGATAGGGGTACAAGTGGTATTGGCCTAGTGCTGCGTGACAGGTTGGGGTAATCTAAAGGTTGTTCAGACGATAGGCTCTACGGTTTGTTCATCTCCGTAAGGGGCGGAAGCGGTTGCAGTGCTAGAAGGACTCCGTCTGGCTCGGGAGTTGGATGTGCATCAATTAACGATTTTGTTGAATTCGTTGACTTTAATCAAAATTATTAACGAGGAAATCCAATGTCAGTCTTGCATTACTACAGTGATCTGGGATATTAGAGAAGTCAGAAAATCTTTTGAGATGGTCAGTTTTAAATTCATTAGCCGTAAATTCAATAGTTTTGCTCATAAGATGTCCCGTGTGGGTCTCTCGTCTTCATCGCCTTTTTTGTGGCTAGAAAGTTATCCTGAATGGATGGTTAGTTTATCGCTCAATGAGCGAGGTCTGTTTGTTTCCCATCGGGATTCTAGTGCTTCTTAATGAAAGTTTCTCTTCTCTTTGAAAAAAAAAATGTTATGTACGTGAAATTTATAATTTATTTTAAAAAATATATAAACATTTATAGTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATATAACATAATATAATAAATACAAATAGTTGGTTCAACGTCTTACTATGGTTCTTTTTTAATAATCTTTTTTTTTTTTGAAAAATTAATAATCTTATTGTTGTTTACATGGAGATAAATTATAAATTAATTTTATGTTATACAAAACTTTTAGTTGAAATTTAGATATACTAATTTATGCAATATGGTTGTTTTTAATAACTCTTATCATTTAGTTATAGATAGTATAGATAAAGATGAGTCAATATCTTAATCGACGGGGACTTAAAATATCTCATTCGTTTTCTTTTCTTTTCTTTTTTTTTTTAAATTAAATTTTGTTAAACAGAAAGTCGGTGCTTGCTCCCTGACGTGGGCCGTGTAGGCCCAATGGGCCTGGATATATTAGCCATAGCAGTTGAAGGATTCTGTGTAATTTTGGACGATGATGATTCGGGGATTTCAGTTGACTCTGGTTCTCGCGGTGATCACCCTCACCGCCCTTTTTCCTAGAGATGGCCTTAACGGAGCCGAAGCTTCAACTTCCACTTCTGCTTTCGTTCACAACGTCATCTACTCTAACAGGATTGCCATGTTCTCCAAATCCTACTGCCCGTATGTTCTCCTCTTCTCTATCTTTTCTATCAACACACGCTCGCTTAATTCTTTTTCTTTTTTCCGTTTTCTGCATAATTCGGCGGTTCAATGCATGATATTTAGGCACAGTAATCAATAAAATCATAGCTGTAACGAGTTCTTTCTGCCGATGAATCTGACATTTCTAATATTACCGATTCCCGGCTTTTTGAGAAATCAATATGGGATTTACGAGTGCTTGATTCTGATGTTCTTGGCCAATTTTGGAGTTGAATGAGAAGGGTATATTTCCCTCCTAGCAAATTAATTGGCCCCATCTCTACAAGGACTGAAAAAGTTTGTTTGATTGCTTTTGGGGCTTCTTTTTTTCTTAGTGGTTTCTGGCAGATCAGTTACCAATTGTCAGTCGGGCCTTGAATGATAAGAAAAACGCGGTAATCGGCGGTGAATTGAACAATTTTGATGCTGCTTAGTTCGTAAGTATGTGGAGAGAACTTGTGTCAAGAAACGCTGAAAACTTTAGCACGAAATGAATTTGCTTTCTATCTAGATTATAAAACTTCTTCTATTGTTTAAATTCCTGCTTTGTGTAGTGATCGCCTAGCGGTCTGGTTGTCATTGTATTGGAATAATGTTTTAAAGAAATTTCTGGAAAACTTTACATATTGAAAATTTTCGTTATTTTAATGGCTTGCGTTTGGAACATCAAAAAATGTCATTCACTTGTATAATCTTTTCAACTGGATTCCTGGGATTAGTACTACGGTTGGATTCTTTGCACTGTTTAGTCTCCCTGATTCTACGCTATTCTCTCATTCTTGGAGAGAGGTTTATGGAGATTGCCCCATGTTAGCTCAAGGTTGCAATTTAATATTTCGAAGTACTGATTATGATTGGTAACAAACGATCCTTTAACTGCAATAGTTTTCTGCAACTTCTTTTGACATTGGGTTGAGATTTTCCTCTCTATCCCTCTTCTGTAATTTCATTTATCAATGAAATTTGCTTTGTGTTTCTTCTAAAAAGGAAAAAAGGAATCTTCCTTTACGAATAGTGAAAAGCTACAAAGATTTAAGTGGTCTCTCTCTGTCCCTTTCTGAAGTGAATTAAAAATATTCTATCATTGTCTTGTTCTGCTGGAAGATATTGCTTGGGTGCCAAACGTATATTCAGTGAACTCCAAGAGAAGCCTTTTGTTGTGGAGCTTGATCTTCGAGGTATTTATTTGTTGTTATTTTCGTTGATCATTTGAAATATCAATAATTGTTTGAAGAAGCATTTTCATGGCCACATTATGAGAATCTACATTTACATGTAGATGATGGACCTCAAATTCAGAGTGTCCTACTAGACCTGACAGGCAAGCGCACTGTTCCTCAAATTTTTGTGAATGGAAAACATATTGGTGGCTCTGATGGTGAGCTCTCTCAGTTCCTTAATTATTCAAAAGTGAAGCAGAGTAAATTTCCCATTTCATTACCGTGTGGTTTGGTTTCATATTTTATACAGATCTGAAAGCCGCAGTTGCTAGTGGTCAGTTGCAGAAACTTCTTGCTTCAAGTTGATTGCCTTCTGGGAGAGAGGAAGCACATATTTATTGGACTGAAGCTGCATAGCAGCAGTGTTGAGGAATTTTCACTTTTTGAAAACTTTTGATAATATTTATTATTCGTTGATATTCTGCAACAGAGAATCCTGTTGCAAACATTTGCCCTCTACATCAATGAAAATCTGCTTTTTACTTTCCATTACTTTAAGCCATGATGAAAAAGTGTATGATTAGGATAGTAAATTTTTACCGTGTTGTTGTAGGATATTTTATCACTCTGCAGTGTCTCATAAACGTAGAAGTGGCGTAAAATTGAAGATGGATTTTCTGCATAAGCTGGAATTTGAAAAATTTTCAGCTATTGAATTATGGGGTGGCTTCTGATCAATAAATTAGCCAGAATTACGAGCTTCTGTTAGAAGAAGAACCAGCTATCCAGTCGGGGCAAAGTGCCTACATTTCTCCAAGACGCTGGGGGGAACAAATTAACTCAAAATATATTTTCTTCGAGGAAGGGTATCCAAATACAATAGTAATTAGTATGTAATGATTTTCAACTTTATGGATAATTCTAAGAATTTGTGGACCAAATCTGTCTGTCTCTGTCTCTCACTACGAAGTTCTCAGAGCTCGCAAGCAGCTGATTGCAAGCGATGAGGTATGCGCCTATTTACCTACTGCACTCTTCCGAAGATTCTAGCTGGTCTACAAATCTCTCTAGGGGGTAATTTTATTAGAATTGAATGCTTTTTTCCTACGAAATCAGGAAGACTCTCCATAAGTATCTGGTCGCCAGTCGCCTTTCTGAGCACTCAGCAGCCCTTCCTGGTTTTTGGAGAAGGTCAAGTGAACTTCCCAGCGGAGAGACTTCAACAAGTTCTCCACTTCTCCAATTGTGCTGGATTCATCTCGAACAATCAATTTGCCTCCAGGTCTTACTATTCGATCCACCTCTGCCAAGACAGGAGGCAGTTTGCACCTGTACACGAGAAAAAATCGAGCTGAGTCTTCATCTGTGCATACAAAGTTTAAAAGAATGTATGATTGGGGAGGAGTCCAGTTACATATACCTCTTTTTCAATTTTGAAAAAAGATGGTCAGCGTGCAGTAGATCGTATGTTCTTGGGTATGTGCTGAAGGATTCACACCAATCATGGTAAATCCCAAAGAGACCACGCTCGTAGATCACAGGAAGTGTATCAGGAGCGTCGATGTTCACCACATTCATTACCCAGACTTTAAGGTCTCTCAGAGCTGCTGCAAACCTGCATGGACAAGGTAAGGTATGCGTGATGTTTAATGTTGAAATGCTTCCACTGAAAAGTATAAGCCTTGTGGTTGAGTTGGGAAGAAACAGAATGATCTACTTTACCCGCCATAAACAGATCTCATATCCATCACATTCCTGATGTTGGACAAATTTATGCCTAATCCAGTCAAGTAAGTTTTATTCACAACTCTTTTCCAATGTTCATAATCAGTTGAGAAATCCTGAGGAGCTGGTTTGCCATAAACCCCCATTTGGGAGCTGTTTAGCCAGTAAGGAGGTGCTTGCAACCGCTTAGGCCACTGTTTCGGCCAGTTGCTTCCCCTCACGGCATTGTCAACTGGCACACGGTGCATGCACGCTTGCAATGGTACGTACCTGAAAATGGAAGTCCAATGCAAATCAAATCAAACCCATGAAGGACATTGAGCTCGAGATATCTTGATGCTTGCTTACCAAGCTGCATTCGGATCGTCGTCATTTTTGCACATGGCAGGACGCTTGTGTTTTCTTTGATCATAACATTCGTTTGAAGTCGGTTTCCTGTAAATGGCAGCCCCAATGGAGTTCAGCTTGTCTTTCTGAATCGTCACAAGCTCCCAACACATGGACTTCGTCAAAGCAGACATATCTGAGGACAGGAAAAAAGAAATCATAGGCATGCCAGTGGCCAGCGTCCAAATCTATTTGCTAGTCTAACAAGTTTTGTTTTTCATCTATAAACTTACCCTTCCAAATCTCAACGTCTTCTTCCAGGGTCTGGTACACAGGAGTTGCAGACCAAACAAAATACCCTCCCGGCCTCAGCACTCGGTTCAATTCCAAGAGAAGCATCCCACCTACACCGTCAAACAAAAAAAGGTCCTGTTTTCCTAATTATAAAGCTCTAATTACAAAGTAAGAAGATAGTGAAGTTCATGATTGATTATATAACCTTCTACATGCCAAGGCACTCTACACCGAGCACAGTGAATAATATCAAAAACCATGCTTGGAAATGGCAGACGCTGGGAGCCCATGACGGCAGAAATGGCCGGAATTCCCCGCTCAAGTGCGAATTGGACTTGAGCTTCATGCTCGTCTTTGGGAGCAAACGACATCGTAAGCACATCTTTTTCGAACAGAAAGCCGCCGAAGCTGGCAACTCCGCAGCCCACGTCCAAAATCACTCGTGTCCTCTTCCCCCATGCAATATCCGCTACCGACTGCACCCATTTCATAACTTTAGTTTACATTGAAAGTCATGAAGCAAACCCAAGTTGGAATTTTTTTTTTTACCTGTTCGAGAAAATCAATGTAATGAAGAGCGCCATGAATGAACTGGGTTCCACCGCCGGGAAATGTCAAGAACTCGCCGGTGACCTTGACCCAGTTTTGGTGGCCTTTCACTTCGGCCAGCTTTGTATGCGGTACATTGTGGTACCAAATCTGTCACAATCCACAAACACACACAGTTCATCATGGTTCCATGCAGGCAGGTTCATCAAGGACTAATGTCATCTATCAGCACATAGATGAAGCATACCTTGTCTCTACTTTTGGGCCATTCGATGGATCTTTTGTAACCCTCCGGAAGTGAGACCAGGCAGGTGGGTCCCTCCTCGGGGCAGTGCCTCTCCCGGTGCTCGAAGTGCTTTGTCGTACGCAGCTGCTTCAGTGCTTTCTCGTTGTCCAAACAGGGGATGTAATCGGGGCCCGCCGTGACGTTGCAGAGCTGCCACGTGTACCCGTAGATGCTGCCGTTACTGGTCGATTCTTCCCGCCGGCGATCTTTCTCGTTCTCCGATTGTGCCGCTTGTGTCCCCCATGACTTTTTAGACTCCTTCGACTCTTTGGGTATTCCCGAGGTCTCAAGTGACCCTGCCGTTGTTGTCTCTTCCACTTTGGTTTCTGTTTTTGAGTCCTTTTGGGCTTCTTGGCTCTCCCCGGATTCAGTCTGCCGTGATTCAGATTCTTGATCCTCCGTTGGCTTTTTGTTGCGTCGTTGTCTCTTTTGTGGCTGGTTTTGCTCCGACGAGGTAGTTTCTTCACTGTTGTTGCTCGTGTTTGAGTTGTTGTCCTGCTCTTGTTGCTGCTGTATTTGTTGGGACTTGTCATCATCTGTATTACGAATTTCAGATTCTTGTGGGACTTTTTCGCCTTCAATTTCAGGTTTCTGTTGATCGTTTTGGGAGTCTCCGCTGTTCTCTGGGATGTCGGTTGTCTGCTGTTGCTCCTGCTGCTCATTTGAAATTGCTTGTTGGATTTCTTGTGTACTGACATTGTTTTCAATCTCTTCCGGTAGTTGTTGTTGTGGTTGTTCCTGAGCATTAGTTTCCAACGGTGCTTCATTGGATTTACTATTGTCAGATTCCACATGCTCCGTGGATTCATTGGTTTGATCAGATAAATTAGCGTTTTGTTCTTGGCTGCTCCCTCCCGAATCTATTTTCTCCTCTGTTTTCCCCTCTGTCTTTTGGCTCTCTTCCGCTTGTTGGTTCTGAGTCATCGTACTCTCCTCCGATAATTGAGCCTCATTTGCGGCAGCACTGCCACCGCCGTCTTGTTCTTTGGATTCCTGCCCGTCATTGGCACTGTCCTTGGAACGATCATCACGAGACTTGGCATCGTCGCTAACGGTAGCAGCACTGTCGTCGGATTTAATAGCATCGAGGGGGAGATCACCGGGATTATCCTCGAATGCGGGAGTGGCCTCCTTGTCGTCGGATTTGGGGAGCTGGGGTTCGTCGGTGGAAGAGGCGAAGTCGGCGGTGGTAGCGGCGGAGGAAGTGCGAGTGGTGGTCTGCGGGGGGACGACGGAGTTGGAGGTGAGCATCCATATTCCGAGAACACAGAGGGCTAAGAAGACGACGGTGGTGACAGTGGAAGCATAGGAAGAGGAGGAGGAGGATCTCTTGGTAGTGCGGGGCCTTCCGAGAGCCATAACGATAACGACAACGATAACAAGAGAGAGAGGCAAAAGGAGGAATATTGGAGTGTTTGGGTGTGGAGAGTGAGAAGGAATAATACGAGTCGAGATGGGAAGAGAGAGAAAATGTGTTTGTGGACAGACAAAAAGGATTCTAAATTTGGAAGGTTCCAAGATCCAAACGACTCGGAGAAGAGAAGTTTCTAAACGGACAATTGGCCATAATGTCTCTTCATTCTGTTTCGCCTTCCTCTTTGCATGTATTATTGCATTGCATGCACCCTTCTTTATCTCCC

mRNA sequence

ATGGGAGATAGGGGTACAAGTGGGGCGGAAGCGGTTGCAGTGCTAGAAGGACTCCGTCTGGCTCGGGAGTTGGATGTGCATCAATTAACGATTTTGTTGAATTCGTTGACTTTAATCAAAATTATTAACGAGGAAATCCAATGTCAGTCTTGCATTACTACAGTGATCTGGGATATTAGAGAAGTCAGAAAATCTTTTGAGATGTTGACTCTGGTTCTCGCGGTGATCACCCTCACCGCCCTTTTTCCTAGAGATGGCCTTAACGGAGCCGAAGCTTCAACTTCCACTTCTGCTTTCGTTCACAACGTCATCTACTCTAACAGGATTGCCATGTTCTCCAAATCCTACTGCCCTACTACGGTTGGATTCTTTGCACTGTTTAGTCTCCCTGATTCTACGCTATTCTCTCATTCTTGGAGAGAGGTTTATGGAGATTGCCCCATGTTAGCTCAAGGTTGCAATTTAATATTTCGAAGTACTGATTATGATTGA

Coding sequence (CDS)

ATGGGAGATAGGGGTACAAGTGGGGCGGAAGCGGTTGCAGTGCTAGAAGGACTCCGTCTGGCTCGGGAGTTGGATGTGCATCAATTAACGATTTTGTTGAATTCGTTGACTTTAATCAAAATTATTAACGAGGAAATCCAATGTCAGTCTTGCATTACTACAGTGATCTGGGATATTAGAGAAGTCAGAAAATCTTTTGAGATGTTGACTCTGGTTCTCGCGGTGATCACCCTCACCGCCCTTTTTCCTAGAGATGGCCTTAACGGAGCCGAAGCTTCAACTTCCACTTCTGCTTTCGTTCACAACGTCATCTACTCTAACAGGATTGCCATGTTCTCCAAATCCTACTGCCCTACTACGGTTGGATTCTTTGCACTGTTTAGTCTCCCTGATTCTACGCTATTCTCTCATTCTTGGAGAGAGGTTTATGGAGATTGCCCCATGTTAGCTCAAGGTTGCAATTTAATATTTCGAAGTACTGATTATGATTGA

Protein sequence

MGDRGTSGAEAVAVLEGLRLARELDVHQLTILLNSLTLIKIINEEIQCQSCITTVIWDIREVRKSFEMLTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFSLPDSTLFSHSWREVYGDCPMLAQGCNLIFRSTDYD
Homology
[Close]
BLAST of Spg012696 vs. NCBI nr
Match: XP_008440783.1 (PREDICTED: glutaredoxin-C3 [Cucumis melo] >KAA0025699.1 glutaredoxin-C3 [Cucumis melo var. makuwa] >TYK12574.1 glutaredoxin-C3 [Cucumis melo var. makuwa])

HSP 1 Score: 93.2 bits (230), Expect = 2.2e-15
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 0 

Query: 69  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS 128
           LTLV+AVITL AL+PRDGL GAEA+TSTSAFVHNVIYSNRIAMFSKSYCP  +G   +FS
Sbjct: 10  LTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYCLGAKRIFS 69

[Close]
BLAST of Spg012696 vs. NCBI nr
Match: XP_004149976.1 (glutaredoxin-C3 [Cucumis sativus] >KAE8647600.1 hypothetical protein Csa_003338 [Cucumis sativus])

HSP 1 Score: 89.7 bits (221), Expect = 2.5e-14
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0 

Query: 69  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS 128
           LTLVLAVITL AL+PRD L GAEA+TSTSAFV NVIYSNRIAMFSKSYCP  +G   +FS
Sbjct: 17  LTLVLAVITLAALYPRDALTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFS 76

[Close]
BLAST of Spg012696 vs. NCBI nr
Match: XP_038881412.1 (glutaredoxin-C3 [Benincasa hispida])

HSP 1 Score: 89.4 bits (220), Expect = 3.2e-14
Identity = 46/60 (76.67%), Postives = 51/60 (85.00%), Query Frame = 0 

Query: 69  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS 128
           LTLV+AVITL+ L PRDGL G EA+TSTSAFVHNVIYSNRIAMFSKSYCP  +G   +FS
Sbjct: 10  LTLVVAVITLSGLSPRDGLTGVEAATSTSAFVHNVIYSNRIAMFSKSYCPYCLGAKRMFS 69

[Close]
BLAST of Spg012696 vs. NCBI nr
Match: XP_023003943.1 (glutaredoxin-C3-like [Cucurbita maxima])

HSP 1 Score: 86.3 bits (212), Expect = 2.7e-13
Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 69  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS 128
           LTL L VITL+AL PRDGL GAEASTSTSAFV NVI+SNRIAMFSKSYCP  +G   +FS
Sbjct: 7   LTLALVVITLSALHPRDGLIGAEASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFS 66

[Close]
BLAST of Spg012696 vs. NCBI nr
Match: XP_023518077.1 (glutaredoxin-C3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 85.5 bits (210), Expect = 4.6e-13
Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 69  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS 128
           LTL L VITL+AL PRDGL GA+ASTSTSAFV NVI+SNRIAMFSKSYCP  +G   +FS
Sbjct: 7   LTLALVVITLSALRPRDGLTGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFS 66

[Close]
BLAST of Spg012696 vs. ExPASy TrEMBL
Match: A0A5A7SKA5 (Glutaredoxin-C3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001560 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.1e-15
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 0 

Query: 69  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS 128
           LTLV+AVITL AL+PRDGL GAEA+TSTSAFVHNVIYSNRIAMFSKSYCP  +G   +FS
Sbjct: 10  LTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYCLGAKRIFS 69

[Close]
BLAST of Spg012696 vs. ExPASy TrEMBL
Match: A0A1S3B2P3 (glutaredoxin-C3 OS=Cucumis melo OX=3656 GN=LOC103485100 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.1e-15
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 0 

Query: 69  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS 128
           LTLV+AVITL AL+PRDGL GAEA+TSTSAFVHNVIYSNRIAMFSKSYCP  +G   +FS
Sbjct: 10  LTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYCLGAKRIFS 69

[Close]
BLAST of Spg012696 vs. ExPASy TrEMBL
Match: A0A0A0KKK8 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G504670 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.2e-14
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0 

Query: 69  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS 128
           LTLVLAVITL AL+PRD L GAEA+TSTSAFV NVIYSNRIAMFSKSYCP  +G   +FS
Sbjct: 108 LTLVLAVITLAALYPRDALTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFS 167

[Close]
BLAST of Spg012696 vs. ExPASy TrEMBL
Match: A0A6J1KY27 (glutaredoxin-C3-like OS=Cucurbita maxima OX=3661 GN=LOC111497386 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.3e-13
Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 69  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS 128
           LTL L VITL+AL PRDGL GAEASTSTSAFV NVI+SNRIAMFSKSYCP  +G   +FS
Sbjct: 7   LTLALVVITLSALHPRDGLIGAEASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFS 66

[Close]
BLAST of Spg012696 vs. ExPASy TrEMBL
Match: A0A6J1HE47 (glutaredoxin-C3 OS=Cucurbita moschata OX=3662 GN=LOC111463355 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 5.0e-13
Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 69  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS 128
           LTL L VITL+AL PRDGL GA+ASTSTSAFV NVI+SNRIAMFSKSYCP  +G   +FS
Sbjct: 7   LTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFS 66

[Close]
BLAST of Spg012696 vs. TAIR 10
Match: AT1G77370.1 (Glutaredoxin family protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.4e-04
Identity = 22/41 (53.66%), Postives = 27/41 (65.85%), Query Frame = 0 

Query: 88  NGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS 129
           N A A+ S SAFV N I SN+I +FSKSYCP  +    +FS
Sbjct: 25  NSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFS 65

The following BLAST results are available for this feature:
BLAST of Spg012696 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008440783.12.2e-1580.00PREDICTED: glutaredoxin-C3 [Cucumis melo] >KAA0025699.1 glutaredoxin-C3 [Cucumis... [more]
XP_004149976.12.5e-1478.33glutaredoxin-C3 [Cucumis sativus] >KAE8647600.1 hypothetical protein Csa_003338 ... [more]
XP_038881412.13.2e-1476.67glutaredoxin-C3 [Benincasa hispida][more]
XP_023003943.12.7e-1376.67glutaredoxin-C3-like [Cucurbita maxima][more]
XP_023518077.14.6e-1375.00glutaredoxin-C3 [Cucurbita pepo subsp. pepo][more]
BLAST of Spg012696 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg012696 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SKA51.1e-1580.00Glutaredoxin-C3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0015... [more]
A0A1S3B2P31.1e-1580.00glutaredoxin-C3 OS=Cucumis melo OX=3656 GN=LOC103485100 PE=3 SV=1[more]
A0A0A0KKK81.2e-1478.33Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G50467... [more]
A0A6J1KY271.3e-1376.67glutaredoxin-C3-like OS=Cucurbita maxima OX=3661 GN=LOC111497386 PE=3 SV=1[more]
A0A6J1HE475.0e-1375.00glutaredoxin-C3 OS=Cucurbita moschata OX=3662 GN=LOC111463355 PE=3 SV=1[more]
BLAST of Spg012696 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G77370.11.4e-0453.66Glutaredoxin family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 7..71
e-value: 5.4E-8
score: 32.7
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 3..77
e-value: 5.3E-5
score: 25.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg012696.1Spg012696.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0098869 cellular oxidant detoxification
molecular_function GO:0004362 glutathione-disulfide reductase (NADPH) activity
molecular_function GO:0097573 glutathione oxidoreductase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity