Spg012652 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg012652
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Diaminopimelate epimerase
Location	scaffold1: 13776500 .. 13780096 (+)
RNA-Seq Expression	Spg012652
Synteny	Spg012652

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCGACTTGTCTGTTGCTTAGCTTCGGCTTTACAGAGACCGGAGCGGGAAGCTTGTACTCGGACCACAGCGCAGCCATGGCCATAGCCGCCACCATTTCTCTTCCACTTACCTCTCCATCTCGACGCTCTCTCGCCTCAATTCCTTCTCTCCGATCGTCTTTCTCTTCCACACTTCAACTGGATTCAATTGCAAAGAATTCCGCGCGGAGAACAAGCCCTAGGCTCTCCGTATCCGCCTCTTCCGCTGGCCTTGAAGTTACAGAGAAAGCGCCGTCGTTGTCTTTTCTTGACCGGAGAGAGAGTGGCCTCCTTCACTTTGTGAAGTACCACGGTCTCGGCAACGATTTCATCTTGGTAATGATTCTCTGAGTTTACTGTTTGATATGTTTTTTTTTTTTTTGGTTTTGTTTATCTTGAAATTGGCTGTAAATGCGAGTTATTATCTAAATCTTATCTGTTGGGGCTTTGGATTTTAAATGGTGGAAGTGTGAAACCGGAACTCGGTATCTTAACTTTGCGCCGTTGACTCCGGTGATGTTAATCATGGAAAATGCTACGGGATTTTAATAAGGAACTAATTGGATTTTTTCTTTTTGTCGGTCGGAAATAGTTTAATTCATACTCAGCTAAACAGTCTGCATTAGTCTGATATTAATTACAAGTGAGCTTGAATAGGTTGATAATAGGGACTCATCGGAGCCTAGGATCACTCCGGAGCAAGCTGTGAAGTTATGTGATCGAAACTTCGGGATCGGTGCTGACGGAGTTATCTTTGCTATGCCAGGCGTTAATGGTACTGATTATACCATGAGGATATTCAATTCCGACGGTAGTGAACCAGAGGTAATTGCTTTTTCAGAAATAATTGCATGTTATTGTGTTGTTCCTACCAATTGCGTCTGGGGCTGAAATTTTTTGTGCTTATATCTTATAGATGTGTGGTAATGGAGTACGATGCTTTGCTAGATTTATTGCGGAGCTCGAGAATTTACAGGGAAGGCATAGGTATATCTTCTTGCTGTTTTACTATTGTTTATCTTCTGAGGCCATCTGTGCATACGTTCCTGCTGAATTACAACGTAGTATAGCCCTTTCAAGACATTTAAATTTTAACTTTCGGCATTAATATTTCAAATATGAACGTTTGGCTTATATTTCTAGTCCTGGGCTTAGAAAATCTGTTTCCTTTTGTAGTTCACTTATGCAACTAATTCGTTTATGATAGCTTATATCTTTTATTCTTCTTTATTTAAGTATTAGAATTCTGATCGAGCTCACAGTTTTCTGTTCATATTCTCGCAGTTTTACTATTCATACTGGTGCTGGTCTCATTATTCCTGAACTTCAGGATGATGGACAGGTATATTTCGATTATGTTCTTTTGGATATGTTGATCCGGCTTAAGAATAGATGCCTCCGAAGTTTATTTTACCTGTTTGATGAAAGATTTCCTAATCTACCGTCAACTGCTGTTTCAATCTTTAGAAGGTTTAATTGGCGCATCTTTACCTTTTTTTTTCATTGGCAAATGCAATCTGTGCTTCTGCGATTACAACTCAGTGCCCTTTTTTAATTTTTAATTTAATTTTAATTTTATTTTTTTATATATATAAGTTTTGGCAAATGCAATCTAAGTTTTTTGGGTTCAGTGCCCATCTTAACGTACATGCAAATTCAGGTAAAAGTAGACATGGGTGAGCCAATTCTTAAAGCATCAGATGTGCCTACCCGATTGACACCAAATAGAGATCAATCTGTTGTAAAGTCAGACATAGAAGTAGATGGAGTTACATGGAGCGTAACCTGTGTCAGTATGGGAAACCCTCATTGTGTAACTTTTGGGAACAAAATTGAGCAGGTATTTATTTAGAAGTACATTTTGCAACATTCCACTCACTCTTCTTAAACTTCCCAAAGTGGATTGCTATGGCTTGCCCTTTTGTTTTCTTCTCTTACTAAAATATAATCACTTAGCATGTTATATATATTGTGTACGTGTTGTAGTAGATTAGAGGCAATAAGCTGCACATTAGTATTAACTGAAGAATTTCTTTGAGTACTTTGTATTCTTAAATACTAGGCTCCATGAGTACAACATTGTAATGTTATCTATTTGAGCATTTATGAACCAAGGAGTACAATTAAATTAAGAAGCAATACTAAGCTGTGAGGTCACCTCTGGTGATCACTAAGCTCCTTTTACATTTAAATATTTTATTTCCTCCTTTGACCTAAAATAGCTTGCAGCAGTTTAAACTCTGTTTTGGGGGGTAATGCAACTTGATTGAGCCTTGAGTTAGATTTTACTGCCTATAGTCATTATGTTGGGGTACTACGATATCGTTCATTTACTAGTTGTGCTGATTTTAGCATGGTCATGAACAGAACCTGCAGGTCGATGACATAAATTTGGCTGCAATTGGTCCAAAATTTGAGCATCATGAGATGTTTCCAGCACGAACAAATACAGGTTGGTATTTTTAGCAAGTTTGGAGTTTCAGTTTTTTCTAGTGGAGATCTATCTTTGAGCAAACATAATTTTTTTCTAATCGTTTAAAGAGTCTTCTCTTCCCTTTCTAAGAATGAAAATCTTTTACTTTTATGTTCACTGAGATGCATTTTTTACACTGCTCATGCTGTTTTTCTTGACGTCCACGACAGAATTTGTGCAAGTCTTCTCCAATTCACACCTTAAAATGCGTGTTTGGGAGCGTGGTGCAGGTTCGAATTTAGTATAATTTAAAATGAACTTCAAAAGTTGTAAGCATATAAATAGTGAATCACTTCATAACAATCCTTCCGGCTGTACTTCTCAATGACACTACAGGCGCAACACTTGCTTGTGGAACCGGAGCCTGTGCGGTCGTTGTTGCAGCCGTTCTTGAGGGTCGTGCTGGGCGGGTAAGCAGCTCATGTGTATCTTTTAGATACAACGGCAATAATATAATATATCACACCATTTGGTTATATAGACAGAAAAAGAAAAAGATCAAGCAAATTTCAATCCTTTCTTTTCTTTAAATTTCCTAACGTTGAATTCAAATGTCTCGAAACAGAATTGCACTGTTGATCTGCCTGGAGGACCATTACAGATAGAGTGGAGCGAGCAAGACAACCACGTATACATGACTGGACCAGCCGAAGTAGTGTTCTATGGATCTGTTCCCCTACAATAAAATCAACTTTTGCTGGTTCTTGACGACTTTCACTGCTCCAAAGGATCGGTACGAAGCAATCGTCAAATTTTGGCATCTCAGCCAGTATGGCATCCTTTAGCTCATCGCTTGCGATAATCGATAAGTACCATTAAACCTGCAGGTGATAACTTATGAAATGTATCTTCTGTTTGTACTTCCATTACTCTGTATGCACAATATCTGTTCATTATGAATTATATTTGTCTTCTGTTTCTTGAGAATAAGAGTAATAACTTCGTTGTTTGTCTCTGCATTTGTACGGATACATAATTTCGAACATGTAGAGGTATTTTGCTTTGATTTCTTTTGTTGAATCTGTCGAGTGTTGAGTTTTCGACTAACATTTTTCTCTGTCGTGAACATTATCCAGTGGTATTTTGCTTTGATTTCGTTCCCTG

mRNA sequence

ATGGCCATAGCCGCCACCATTTCTCTTCCACTTACCTCTCCATCTCGACGCTCTCTCGCCTCAATTCCTTCTCTCCGATCGTCTTTCTCTTCCACACTTCAACTGGATTCAATTGCAAAGAATTCCGCGCGGAGAACAAGCCCTAGGCTCTCCGTATCCGCCTCTTCCGCTGGCCTTGAAGTTACAGAGAAAGCGCCGTCGTTGTCTTTTCTTGACCGGAGAGAGAGTGGCCTCCTTCACTTTGTGAAGTACCACGGTCTCGGCAACGATTTCATCTTGGTTGATAATAGGGACTCATCGGAGCCTAGGATCACTCCGGAGCAAGCTGTGAAGTTATGTGATCGAAACTTCGGGATCGGTGCTGACGGAGTTATCTTTGCTATGCCAGGCGTTAATGGTACTGATTATACCATGAGGATATTCAATTCCGACGGTAGTGAACCAGAGATGTGTGGTAATGGAGTACGATGCTTTGCTAGATTTATTGCGGAGCTCGAGAATTTACAGGGAAGGCATAGTTTTACTATTCATACTGGTGCTGGTCTCATTATTCCTGAACTTCAGGATGATGGACAGGTAAAAGTAGACATGGGTGAGCCAATTCTTAAAGCATCAGATGTGCCTACCCGATTGACACCAAATAGAGATCAATCTGTTGTAAAGTCAGACATAGAAGTAGATGGAGTTACATGGAGCGTAACCTGTGTCAGTATGGGAAACCCTCATTGTGTAACTTTTGGGAACAAAATTGAGCAGAACCTGCAGGTCGATGACATAAATTTGGCTGCAATTGGTCCAAAATTTGAGCATCATGAGATGTTTCCAGCACGAACAAATACAGAATTTGTGCAAGTCTTCTCCAATTCACACCTTAAAATGCGTGTTTGGGAGCGTGGTGCAGGCGCAACACTTGCTTGTGGAACCGGAGCCTGTGCGGTCGTTGTTGCAGCCGTTCTTGAGGGTCGTGCTGGGCGGAATTGCACTGTTGATCTGCCTGGAGGACCATTACAGATAGAGTGGAGCGAGCAAGACAACCACGTATACATGACTGGACCAGCCGAAGTAGTGTTCTATGGATCTGTTCCCCTACAATAA

Coding sequence (CDS)

ATGGCCATAGCCGCCACCATTTCTCTTCCACTTACCTCTCCATCTCGACGCTCTCTCGCCTCAATTCCTTCTCTCCGATCGTCTTTCTCTTCCACACTTCAACTGGATTCAATTGCAAAGAATTCCGCGCGGAGAACAAGCCCTAGGCTCTCCGTATCCGCCTCTTCCGCTGGCCTTGAAGTTACAGAGAAAGCGCCGTCGTTGTCTTTTCTTGACCGGAGAGAGAGTGGCCTCCTTCACTTTGTGAAGTACCACGGTCTCGGCAACGATTTCATCTTGGTTGATAATAGGGACTCATCGGAGCCTAGGATCACTCCGGAGCAAGCTGTGAAGTTATGTGATCGAAACTTCGGGATCGGTGCTGACGGAGTTATCTTTGCTATGCCAGGCGTTAATGGTACTGATTATACCATGAGGATATTCAATTCCGACGGTAGTGAACCAGAGATGTGTGGTAATGGAGTACGATGCTTTGCTAGATTTATTGCGGAGCTCGAGAATTTACAGGGAAGGCATAGTTTTACTATTCATACTGGTGCTGGTCTCATTATTCCTGAACTTCAGGATGATGGACAGGTAAAAGTAGACATGGGTGAGCCAATTCTTAAAGCATCAGATGTGCCTACCCGATTGACACCAAATAGAGATCAATCTGTTGTAAAGTCAGACATAGAAGTAGATGGAGTTACATGGAGCGTAACCTGTGTCAGTATGGGAAACCCTCATTGTGTAACTTTTGGGAACAAAATTGAGCAGAACCTGCAGGTCGATGACATAAATTTGGCTGCAATTGGTCCAAAATTTGAGCATCATGAGATGTTTCCAGCACGAACAAATACAGAATTTGTGCAAGTCTTCTCCAATTCACACCTTAAAATGCGTGTTTGGGAGCGTGGTGCAGGCGCAACACTTGCTTGTGGAACCGGAGCCTGTGCGGTCGTTGTTGCAGCCGTTCTTGAGGGTCGTGCTGGGCGGAATTGCACTGTTGATCTGCCTGGAGGACCATTACAGATAGAGTGGAGCGAGCAAGACAACCACGTATACATGACTGGACCAGCCGAAGTAGTGTTCTATGGATCTGTTCCCCTACAATAA

Protein sequence

MAIAATISLPLTSPSRRSLASIPSLRSSFSSTLQLDSIAKNSARRTSPRLSVSASSAGLEVTEKAPSLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGAGLIIPELQDDGQVKVDMGEPILKASDVPTRLTPNRDQSVVKSDIEVDGVTWSVTCVSMGNPHCVTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGSVPLQ

Homology

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BLAST of Spg012652 vs. NCBI nr
Match: XP_023518055.1 (diaminopimelate epimerase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 695.3 bits (1793), Expect = 2.9e-196
Identity = 343/364 (94.23%), Postives = 352/364 (96.70%), Query Frame = 0


Query: 1   MAIAATISLPLTSPSRRSLASIPSLRSSFSSTLQLDSIAKNSARRTSPRLSVSASSAGLE 60
           MA+AA+ISLPLTSPS RSLASIPSLRSSF STLQLDSI KNSARR SPRLSVS +SAGL 
Sbjct: 1   MAMAASISLPLTSPSPRSLASIPSLRSSFCSTLQLDSIGKNSARRRSPRLSVSVASAGLH 60

Query: 61  VTEKAPSLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIG 120
           VTEKA SLSFL+RRESG LHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIG
Sbjct: 61  VTEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIG 120

Query: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGA 180
           ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFT+HTGA
Sbjct: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGA 180

Query: 181 GLIIPELQDDGQVKVDMGEPILKASDVPTRLTPNRDQSVVKSDIEVDGVTWSVTCVSMGN 240
           GLIIPELQDDGQVKVDMGEPILKASDVPTRL PN D+SVVKSDIEVDGVTWSVTCVSMGN
Sbjct: 181 GLIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGN 240

Query: 241 PHCVTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGA 300
           PHCVTFGNKI+QNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFS SHLKMRVWERGA
Sbjct: 241 PHCVTFGNKIDQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGA 300

Query: 301 GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 360
           GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEW+EQ+NHVYMTGPAEV FYGS
Sbjct: 301 GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGS 360

Query: 361 VPLQ 365
           VPLQ
Sbjct: 361 VPLQ 364

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BLAST of Spg012652 vs. NCBI nr
Match: XP_008447504.1 (PREDICTED: diaminopimelate epimerase, chloroplastic [Cucumis melo] >KAA0047342.1 diaminopimelate epimerase [Cucumis melo var. makuwa])

HSP 1 Score: 692.6 bits (1786), Expect = 1.8e-195
Identity = 343/363 (94.49%), Postives = 350/363 (96.42%), Query Frame = 0


Query: 1   MAIAATISLPLTSPSRRSLASIPSLRSSFSSTLQLDSIAKNSARRTSPRLSVSASSAGLE 60
           MAIA TISLPLTSPS RSLASIPSLR SF+STLQLDS+ K  ARR SPRLSVSASSAGLE
Sbjct: 1   MAIATTISLPLTSPSSRSLASIPSLRLSFTSTLQLDSLPKYFARRRSPRLSVSASSAGLE 60

Query: 61  VTEKAPSLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIG 120
           VTEKAPSLSFLD RESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQA KLCDRNFGIG
Sbjct: 61  VTEKAPSLSFLDHRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAAKLCDRNFGIG 120

Query: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGA 180
           ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFT+HTGA
Sbjct: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGA 180

Query: 181 GLIIPELQDDGQVKVDMGEPILKASDVPTRLTPNRDQSVVKSDIEVDGVTWSVTCVSMGN 240
           GLIIPELQDDGQVKVDMGEPILKA+DVPTRLTP +DQSVVK+ IEVDGV WSVTCVSMGN
Sbjct: 181 GLIIPELQDDGQVKVDMGEPILKATDVPTRLTPTKDQSVVKAAIEVDGVAWSVTCVSMGN 240

Query: 241 PHCVTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGA 300
           PHCVTFGNKIEQNLQV+DINLAAIGPKFEHHEMFPARTNTEFVQV SNSHLKMRVWERGA
Sbjct: 241 PHCVTFGNKIEQNLQVEDINLAAIGPKFEHHEMFPARTNTEFVQVLSNSHLKMRVWERGA 300

Query: 301 GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 360
           GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS
Sbjct: 301 GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 360

Query: 361 VPL 364
           VPL
Sbjct: 361 VPL 363

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BLAST of Spg012652 vs. NCBI nr
Match: XP_038880931.1 (diaminopimelate epimerase, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 690.6 bits (1781), Expect = 7.0e-195
Identity = 340/364 (93.41%), Postives = 350/364 (96.15%), Query Frame = 0


Query: 1   MAIAATISLPLTSPSRRSLASIPSLRSSFSSTLQLDSIAKNSARRTSPRLSVSASSAGLE 60
           MAIA TIS PLTSPS RSLAS PSLRSSFSSTLQLDS++K+SA+R SPRL++SASSAGLE
Sbjct: 1   MAIAGTISFPLTSPSPRSLASFPSLRSSFSSTLQLDSLSKHSAQRRSPRLTISASSAGLE 60

Query: 61  VTEKAPSLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIG 120
           VTEKAPS SFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQA KLCDRNFGIG
Sbjct: 61  VTEKAPSSSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAAKLCDRNFGIG 120

Query: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGA 180
           ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQG HSFT+HTGA
Sbjct: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGTHSFTVHTGA 180

Query: 181 GLIIPELQDDGQVKVDMGEPILKASDVPTRLTPNRDQSVVKSDIEVDGVTWSVTCVSMGN 240
           GLIIPELQD+GQVKVDMGEPILKASDVPTRL P  DQSVVK+DIEVDGV WSVTCVSMGN
Sbjct: 181 GLIIPELQDNGQVKVDMGEPILKASDVPTRLAPTTDQSVVKADIEVDGVAWSVTCVSMGN 240

Query: 241 PHCVTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGA 300
           PHCVTFGNKI+QNLQVDDINLAAIGPKFEHH MFPARTNTEFVQVFSNSHLKMRVWERGA
Sbjct: 241 PHCVTFGNKIDQNLQVDDINLAAIGPKFEHHVMFPARTNTEFVQVFSNSHLKMRVWERGA 300

Query: 301 GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 360
           GATLACGTGACAVVVAAVLEG AGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS
Sbjct: 301 GATLACGTGACAVVVAAVLEGHAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 360

Query: 361 VPLQ 365
           VPLQ
Sbjct: 361 VPLQ 364

[Close]

BLAST of Spg012652 vs. NCBI nr
Match: XP_022977248.1 (diaminopimelate epimerase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 690.3 bits (1780), Expect = 9.2e-195
Identity = 343/364 (94.23%), Postives = 351/364 (96.43%), Query Frame = 0


Query: 1   MAIAATISLPLTSPSRRSLASIPSLRSSFSSTLQLDSIAKNSARRTSPRLSVSASSAGLE 60
           MAI+ TISLP TSPSRRSLASI  LRSS SSTLQLDS++K SARR SPRLSVSASSAGLE
Sbjct: 39  MAISTTISLPFTSPSRRSLASISFLRSSVSSTLQLDSLSKYSARRRSPRLSVSASSAGLE 98

Query: 61  VTEKAPSLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIG 120
           VTEKA S SFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQA KLCDRNFGIG
Sbjct: 99  VTEKALSSSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAAKLCDRNFGIG 158

Query: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGA 180
           ADGVIFA+PGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGA
Sbjct: 159 ADGVIFALPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGA 218

Query: 181 GLIIPELQDDGQVKVDMGEPILKASDVPTRLTPNRDQSVVKSDIEVDGVTWSVTCVSMGN 240
           GLI+P+LQD+G VKVDMGEPILKASDVPTRLTPN+DQSVVKSDIEVDGV WSVTCVSMGN
Sbjct: 219 GLIVPQLQDNGLVKVDMGEPILKASDVPTRLTPNKDQSVVKSDIEVDGVAWSVTCVSMGN 278

Query: 241 PHCVTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGA 300
           PHCVTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGA
Sbjct: 279 PHCVTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGA 338

Query: 301 GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 360
           GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQ NHVYMTGPAEVVFYGS
Sbjct: 339 GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQANHVYMTGPAEVVFYGS 398

Query: 361 VPLQ 365
           VPLQ
Sbjct: 399 VPLQ 402

[Close]

BLAST of Spg012652 vs. NCBI nr
Match: XP_022143907.1 (diaminopimelate epimerase, chloroplastic [Momordica charantia])

HSP 1 Score: 689.9 bits (1779), Expect = 1.2e-194
Identity = 342/364 (93.96%), Postives = 350/364 (96.15%), Query Frame = 0


Query: 1   MAIAATISLPLTSPSRRSLASIPSLRSSFSSTLQLDSIAKNSARRTSPRLSVSASSAGLE 60
           MAIAATISLPLTSPSRRSLASIPSLRSSFSS +QLD +  N ARR SPRLSVSASSAGLE
Sbjct: 1   MAIAATISLPLTSPSRRSLASIPSLRSSFSSRVQLDFLGNNPARRRSPRLSVSASSAGLE 60

Query: 61  VTEKAPSLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIG 120
           VTEK+ SLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPR+TPEQAVKLCDRNFGIG
Sbjct: 61  VTEKSSSLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRVTPEQAVKLCDRNFGIG 120

Query: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGA 180
           ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFT+HTGA
Sbjct: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGA 180

Query: 181 GLIIPELQDDGQVKVDMGEPILKASDVPTRLTPNRDQSVVKSDIEVDGVTWSVTCVSMGN 240
           GLIIPELQDDGQVKVDMGEPILKAS VPTRL PN DQ+VVKSDIEVD VTWSVTCVSMGN
Sbjct: 181 GLIIPELQDDGQVKVDMGEPILKASGVPTRLAPNTDQAVVKSDIEVDEVTWSVTCVSMGN 240

Query: 241 PHCVTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGA 300
           PHCVTFGNK EQ+LQVDDINLAAIGPKFEHHEMFPARTNTEFVQV S SHLKMRVWERGA
Sbjct: 241 PHCVTFGNKTEQSLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVVSRSHLKMRVWERGA 300

Query: 301 GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 360
           GATLACGTGACAVVVAAVLEGRAGR+CTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS
Sbjct: 301 GATLACGTGACAVVVAAVLEGRAGRSCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 360

Query: 361 VPLQ 365
           VPLQ
Sbjct: 361 VPLQ 364

[Close]

BLAST of Spg012652 vs. ExPASy Swiss-Prot
Match: Q9LFG2 (Diaminopimelate epimerase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DAPF PE=1 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 1.0e-151
Identity = 262/360 (72.78%), Postives = 301/360 (83.61%), Query Frame = 0


Query: 5   ATISLPLTSPSRRSLASIPSLRSSFSSTLQLDSIAKNSARRTSPRLSVSASSAGLEVT-E 64
           A +S    +P  R +++  S      S+L      K    + SP L VSA+++   VT E
Sbjct: 4   AAVSTVSVAPQSRRVSNAFSRNLGSVSSLSFGFFEKEYCFK-SPSLRVSAAASMDAVTAE 63

Query: 65  KAPSLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIGADG 124
           K    SFLD++E+G+LHFVKYHGLGNDFILVDNRDSSEP+IT EQA KLCDRNFG+GADG
Sbjct: 64  KFSPASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADG 123

Query: 125 VIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGAGLI 184
           VIFAMPGVNGTDY MRIFNSDGSEPEMCGNGVRCFARFIAELENLQG+HSFTIHTGAGLI
Sbjct: 124 VIFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAGLI 183

Query: 185 IPELQDDGQVKVDMGEPILKASDVPTRLTPNRDQSVVKSDIEVDGVTWSVTCVSMGNPHC 244
           +PE+QDDGQVKVDMG PILKA DVPT+L+ N+ ++VV++++ VDGV+W+VTCVSMGNPHC
Sbjct: 184 VPEIQDDGQVKVDMGTPILKAQDVPTKLSGNKGEAVVEAELVVDGVSWNVTCVSMGNPHC 243

Query: 245 VTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGAGAT 304
           +TFG K   NL+VDD+NL  IGPKFEHHEMFPARTNTEFV+V S SHLKMRVWERGAGAT
Sbjct: 244 ITFGKKGGPNLKVDDLNLPEIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGAT 303

Query: 305 LACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGSVPL 364
           LACGTGACA+VVAAVLEGRA R CTVDLPGGPL+IEW ++DNH+YMTGPAE VFYGS  L
Sbjct: 304 LACGTGACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQEDNHIYMTGPAEAVFYGSALL 362

[Close]

BLAST of Spg012652 vs. ExPASy Swiss-Prot
Match: Q2QNF7 (Diaminopimelate epimerase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=DAPF PE=2 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 2.3e-140
Identity = 239/351 (68.09%), Postives = 281/351 (80.06%), Query Frame = 0


Query: 11  LTSPSRRSLASIPSLRSSFSSTLQLDSIAKNSARRTSPRLSVSASSAGLEVTEKAPSLSF 70
           ++S +  + A+I +  +  ++T       +    R +P      ++  +     A + +F
Sbjct: 1   MSSATAAATATIAAAAAKLAATPAPAPSRRRLTLRGNPTARRCVAAMAVSTPRSAAAAAF 60

Query: 71  LDRRES-GLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIGADGVIFAMP 130
           L+RRES   LHFVKY GLGNDFI+VDNRDS+ P++TPE+A KLCDRNFG+GADGVIF MP
Sbjct: 61  LERRESERALHFVKYQGLGNDFIMVDNRDSAVPKVTPEEAAKLCDRNFGVGADGVIFVMP 120

Query: 131 GVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGAGLIIPELQD 190
           GVNG DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQG HSF IHTGAGLIIPE+Q+
Sbjct: 121 GVNGADYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGTHSFKIHTGAGLIIPEIQN 180

Query: 191 DGQVKVDMGEPILKASDVPTRLTPNRDQSVVKSDIEVDGVTWSVTCVSMGNPHCVTFGNK 250
           DG+VKVDMG+PIL   D+PT+L   ++++VV++D+ VDG TW VTCVSMGNPHCVTFG K
Sbjct: 181 DGKVKVDMGQPILSGPDIPTKLPSTKNEAVVQADLAVDGSTWQVTCVSMGNPHCVTFGTK 240

Query: 251 IEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGAGATLACGTG 310
             + L VDD+ L+ IGPKFEHHEMFPARTNTEFV+V S SHLKMRVWERGAGATLACGTG
Sbjct: 241 ELKVLHVDDLKLSDIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTG 300

Query: 311 ACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 361
           ACAVVVAAVLEGRA R C VDLPGGPL+IEW E DNH+YMTGPAE VFYGS
Sbjct: 301 ACAVVVAAVLEGRAERKCVVDLPGGPLEIEWREDDNHIYMTGPAEAVFYGS 351

[Close]

BLAST of Spg012652 vs. ExPASy Swiss-Prot
Match: A2ZLS4 (Putative diaminopimelate epimerase, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=DAPF PE=3 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 5.1e-140
Identity = 245/358 (68.44%), Postives = 284/358 (79.33%), Query Frame = 0


Query: 4   AATISLPLTSPSRRSLASIPSLRSSFSSTLQLDSIAKNSARRTSPRLSVSASSAGLEVTE 63
           AAT ++   + +   LA+ P   +   S  +L      +ARR    ++VS          
Sbjct: 7   AATATIAAAAAAAAKLAATP---APAPSRRRLTLRGNPTARRCVAAMAVS-------TPR 66

Query: 64  KAPSLSFLDRRES-GLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIGAD 123
            A + +FL+RRES   LHFVKY GLGNDFI++DNRDS+ P++TPE+A KLCDRNFG+GAD
Sbjct: 67  SAAAAAFLERRESERALHFVKYQGLGNDFIMMDNRDSAVPKVTPEEAAKLCDRNFGVGAD 126

Query: 124 GVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGAGL 183
           GVIF MPGVNG DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQG HSF IHTGAGL
Sbjct: 127 GVIFVMPGVNGADYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGTHSFKIHTGAGL 186

Query: 184 IIPELQDDGQVKVDMGEPILKASDVPTRLTPNRDQSVVKSDIEVDGVTWSVTCVSMGNPH 243
           IIPE+Q+DG+VKVDMG+PIL   D+PT+L   ++++VV++D+ VDG TW VTCVSMGNPH
Sbjct: 187 IIPEIQNDGKVKVDMGQPILSGPDIPTKLPSTKNEAVVQADLAVDGSTWQVTCVSMGNPH 246

Query: 244 CVTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGAGA 303
           CVTFG K  + L VDD+ L+ IGPKFEHHEMFPARTNTEFV+V S SHLKMRVWERGAGA
Sbjct: 247 CVTFGTKELKVLHVDDLKLSDIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGA 306

Query: 304 TLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 361
           TLACGTGACAVVVAAVLEGRA R C VDLPGGPL+IEW E DNH+YMTGPAE VFYGS
Sbjct: 307 TLACGTGACAVVVAAVLEGRAERKCVVDLPGGPLEIEWREDDNHIYMTGPAEAVFYGS 354

[Close]

BLAST of Spg012652 vs. ExPASy Swiss-Prot
Match: P74667 (Diaminopimelate epimerase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=dapF PE=3 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 4.4e-107
Identity = 188/285 (65.96%), Postives = 219/285 (76.84%), Query Frame = 0


Query: 79  LHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIGADGVIFAMPGVNGTDYTM 138
           L F KYHGLGNDFILVDNR S+EP +TP+QA +LCDR+FGIGADGVIFA+PG  GTDYTM
Sbjct: 3   LSFSKYHGLGNDFILVDNRQSTEPCLTPDQAQQLCDRHFGIGADGVIFALPGQGGTDYTM 62

Query: 139 RIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGAGLIIPELQDDGQVKVDMG 198
           RIFNSDGSEPEMCGNG+RC A+F+A+LE ++ + ++ IHT AG+I P+L  DGQVKVDMG
Sbjct: 63  RIFNSDGSEPEMCGNGIRCLAKFLADLEGVEEK-TYRIHTLAGVITPQLLADGQVKVDMG 122

Query: 199 EPILKASDVPTRLTPNRDQSVVKSDIEVDGVTWSVTCVSMGNPHCVTFGNKIEQNLQVDD 258
           EP L A  +PT L P   + VV   + V G TW+VTCVSMGNPHC+TF +       VD 
Sbjct: 123 EPQLLAELIPTTLAP-AGEKVVDLPLAVAGQTWAVTCVSMGNPHCLTFVD------DVDS 182

Query: 259 INLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGAGATLACGTGACAVVVAAV 318
           +NL  IGP FEHH  F  RTNTEF+QV  +  LKMRVWERGAG TLACGTGACA VVAAV
Sbjct: 183 LNLTEIGPLFEHHPQFSQRTNTEFIQVLGSDRLKMRVWERGAGITLACGTGACATVVAAV 242

Query: 319 LEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGSVPL 364
           L GR  R CTV+LPGG L+IEWS QDN +YMTGPA+ VF G   +
Sbjct: 243 LTGRGDRRCTVELPGGNLEIEWSAQDNRLYMTGPAQRVFSGQAEI 279

[Close]

BLAST of Spg012652 vs. ExPASy Swiss-Prot
Match: Q116P1 (Diaminopimelate epimerase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=dapF PE=3 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 5.7e-107
Identity = 190/281 (67.62%), Postives = 219/281 (77.94%), Query Frame = 0


Query: 81  FVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIGADGVIFAMPGVNGTDYTMRI 140
           F KYHGLGNDFIL+DNR   +P +TPEQA++LCDRNFGIGADGVIFA+PGV  TDYTMRI
Sbjct: 5   FTKYHGLGNDFILIDNRHQLQPILTPEQAIELCDRNFGIGADGVIFALPGVKQTDYTMRI 64

Query: 141 FNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGAGLIIPELQDDGQVKVDMGEP 200
           FNSDGSEPEMCGNG+RC A+FIAELEN   +  + IHTGAG+I+PELQ DGQV VDMG+P
Sbjct: 65  FNSDGSEPEMCGNGIRCLAKFIAELEN-NNKTKYNIHTGAGIIVPELQGDGQVTVDMGQP 124

Query: 201 ILKASDVPTRLTPNRDQSVVKSDIEVDGVTWSVTCVSMGNPHCVTFGNKIEQNLQVDDIN 260
            L AS++PT L  N D  VV   +EV G +W VTCVSMGNPHC+TF   +E    V  I+
Sbjct: 125 RLLASEIPTTLA-NADDKVVDQLLEVGGKSWFVTCVSMGNPHCITF---VE---DVTAID 184

Query: 261 LAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGAGATLACGTGACAVVVAAVLE 320
           LA IGPKFEH+ +FP RTNTEF+QV S  ++KMRVWERGAGATLACGTGACA VVA VL 
Sbjct: 185 LAKIGPKFEHNPVFPERTNTEFIQVISPKYVKMRVWERGAGATLACGTGACASVVAGVLT 244

Query: 321 GRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGSV 362
               R  TV+LPGG L+IEWS  D  +YMTGPAE VF G +
Sbjct: 245 QNNERLVTVELPGGCLEIEWSTIDQKIYMTGPAEKVFTGII 277

[Close]

BLAST of Spg012652 vs. ExPASy TrEMBL
Match: A0A5A7TV60 (Diaminopimelate epimerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001640 PE=3 SV=1)

HSP 1 Score: 692.6 bits (1786), Expect = 9.0e-196
Identity = 343/363 (94.49%), Postives = 350/363 (96.42%), Query Frame = 0


Query: 1   MAIAATISLPLTSPSRRSLASIPSLRSSFSSTLQLDSIAKNSARRTSPRLSVSASSAGLE 60
           MAIA TISLPLTSPS RSLASIPSLR SF+STLQLDS+ K  ARR SPRLSVSASSAGLE
Sbjct: 1   MAIATTISLPLTSPSSRSLASIPSLRLSFTSTLQLDSLPKYFARRRSPRLSVSASSAGLE 60

Query: 61  VTEKAPSLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIG 120
           VTEKAPSLSFLD RESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQA KLCDRNFGIG
Sbjct: 61  VTEKAPSLSFLDHRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAAKLCDRNFGIG 120

Query: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGA 180
           ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFT+HTGA
Sbjct: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGA 180

Query: 181 GLIIPELQDDGQVKVDMGEPILKASDVPTRLTPNRDQSVVKSDIEVDGVTWSVTCVSMGN 240
           GLIIPELQDDGQVKVDMGEPILKA+DVPTRLTP +DQSVVK+ IEVDGV WSVTCVSMGN
Sbjct: 181 GLIIPELQDDGQVKVDMGEPILKATDVPTRLTPTKDQSVVKAAIEVDGVAWSVTCVSMGN 240

Query: 241 PHCVTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGA 300
           PHCVTFGNKIEQNLQV+DINLAAIGPKFEHHEMFPARTNTEFVQV SNSHLKMRVWERGA
Sbjct: 241 PHCVTFGNKIEQNLQVEDINLAAIGPKFEHHEMFPARTNTEFVQVLSNSHLKMRVWERGA 300

Query: 301 GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 360
           GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS
Sbjct: 301 GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 360

Query: 361 VPL 364
           VPL
Sbjct: 361 VPL 363

[Close]

BLAST of Spg012652 vs. ExPASy TrEMBL
Match: A0A1S3BHL3 (Diaminopimelate epimerase OS=Cucumis melo OX=3656 GN=LOC103489934 PE=3 SV=1)

HSP 1 Score: 692.6 bits (1786), Expect = 9.0e-196
Identity = 343/363 (94.49%), Postives = 350/363 (96.42%), Query Frame = 0


Query: 1   MAIAATISLPLTSPSRRSLASIPSLRSSFSSTLQLDSIAKNSARRTSPRLSVSASSAGLE 60
           MAIA TISLPLTSPS RSLASIPSLR SF+STLQLDS+ K  ARR SPRLSVSASSAGLE
Sbjct: 1   MAIATTISLPLTSPSSRSLASIPSLRLSFTSTLQLDSLPKYFARRRSPRLSVSASSAGLE 60

Query: 61  VTEKAPSLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIG 120
           VTEKAPSLSFLD RESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQA KLCDRNFGIG
Sbjct: 61  VTEKAPSLSFLDHRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAAKLCDRNFGIG 120

Query: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGA 180
           ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFT+HTGA
Sbjct: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGA 180

Query: 181 GLIIPELQDDGQVKVDMGEPILKASDVPTRLTPNRDQSVVKSDIEVDGVTWSVTCVSMGN 240
           GLIIPELQDDGQVKVDMGEPILKA+DVPTRLTP +DQSVVK+ IEVDGV WSVTCVSMGN
Sbjct: 181 GLIIPELQDDGQVKVDMGEPILKATDVPTRLTPTKDQSVVKAAIEVDGVAWSVTCVSMGN 240

Query: 241 PHCVTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGA 300
           PHCVTFGNKIEQNLQV+DINLAAIGPKFEHHEMFPARTNTEFVQV SNSHLKMRVWERGA
Sbjct: 241 PHCVTFGNKIEQNLQVEDINLAAIGPKFEHHEMFPARTNTEFVQVLSNSHLKMRVWERGA 300

Query: 301 GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 360
           GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS
Sbjct: 301 GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 360

Query: 361 VPL 364
           VPL
Sbjct: 361 VPL 363

[Close]

BLAST of Spg012652 vs. ExPASy TrEMBL
Match: A0A6J1IPE7 (Diaminopimelate epimerase OS=Cucurbita maxima OX=3661 GN=LOC111477617 PE=3 SV=1)

HSP 1 Score: 690.3 bits (1780), Expect = 4.4e-195
Identity = 343/364 (94.23%), Postives = 351/364 (96.43%), Query Frame = 0


Query: 1   MAIAATISLPLTSPSRRSLASIPSLRSSFSSTLQLDSIAKNSARRTSPRLSVSASSAGLE 60
           MAI+ TISLP TSPSRRSLASI  LRSS SSTLQLDS++K SARR SPRLSVSASSAGLE
Sbjct: 39  MAISTTISLPFTSPSRRSLASISFLRSSVSSTLQLDSLSKYSARRRSPRLSVSASSAGLE 98

Query: 61  VTEKAPSLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIG 120
           VTEKA S SFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQA KLCDRNFGIG
Sbjct: 99  VTEKALSSSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAAKLCDRNFGIG 158

Query: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGA 180
           ADGVIFA+PGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGA
Sbjct: 159 ADGVIFALPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGA 218

Query: 181 GLIIPELQDDGQVKVDMGEPILKASDVPTRLTPNRDQSVVKSDIEVDGVTWSVTCVSMGN 240
           GLI+P+LQD+G VKVDMGEPILKASDVPTRLTPN+DQSVVKSDIEVDGV WSVTCVSMGN
Sbjct: 219 GLIVPQLQDNGLVKVDMGEPILKASDVPTRLTPNKDQSVVKSDIEVDGVAWSVTCVSMGN 278

Query: 241 PHCVTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGA 300
           PHCVTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGA
Sbjct: 279 PHCVTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGA 338

Query: 301 GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 360
           GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQ NHVYMTGPAEVVFYGS
Sbjct: 339 GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQANHVYMTGPAEVVFYGS 398

Query: 361 VPLQ 365
           VPLQ
Sbjct: 399 VPLQ 402

[Close]

BLAST of Spg012652 vs. ExPASy TrEMBL
Match: A0A6J1CS73 (Diaminopimelate epimerase OS=Momordica charantia OX=3673 GN=LOC111013709 PE=3 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 5.8e-195
Identity = 342/364 (93.96%), Postives = 350/364 (96.15%), Query Frame = 0


Query: 1   MAIAATISLPLTSPSRRSLASIPSLRSSFSSTLQLDSIAKNSARRTSPRLSVSASSAGLE 60
           MAIAATISLPLTSPSRRSLASIPSLRSSFSS +QLD +  N ARR SPRLSVSASSAGLE
Sbjct: 1   MAIAATISLPLTSPSRRSLASIPSLRSSFSSRVQLDFLGNNPARRRSPRLSVSASSAGLE 60

Query: 61  VTEKAPSLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIG 120
           VTEK+ SLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPR+TPEQAVKLCDRNFGIG
Sbjct: 61  VTEKSSSLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRVTPEQAVKLCDRNFGIG 120

Query: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGA 180
           ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFT+HTGA
Sbjct: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGA 180

Query: 181 GLIIPELQDDGQVKVDMGEPILKASDVPTRLTPNRDQSVVKSDIEVDGVTWSVTCVSMGN 240
           GLIIPELQDDGQVKVDMGEPILKAS VPTRL PN DQ+VVKSDIEVD VTWSVTCVSMGN
Sbjct: 181 GLIIPELQDDGQVKVDMGEPILKASGVPTRLAPNTDQAVVKSDIEVDEVTWSVTCVSMGN 240

Query: 241 PHCVTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGA 300
           PHCVTFGNK EQ+LQVDDINLAAIGPKFEHHEMFPARTNTEFVQV S SHLKMRVWERGA
Sbjct: 241 PHCVTFGNKTEQSLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVVSRSHLKMRVWERGA 300

Query: 301 GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 360
           GATLACGTGACAVVVAAVLEGRAGR+CTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS
Sbjct: 301 GATLACGTGACAVVVAAVLEGRAGRSCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 360

Query: 361 VPLQ 365
           VPLQ
Sbjct: 361 VPLQ 364

[Close]

BLAST of Spg012652 vs. ExPASy TrEMBL
Match: A0A6J1HDJ7 (Diaminopimelate epimerase OS=Cucurbita moschata OX=3662 GN=LOC111463180 PE=3 SV=1)

HSP 1 Score: 688.0 bits (1774), Expect = 2.2e-194
Identity = 339/364 (93.13%), Postives = 350/364 (96.15%), Query Frame = 0


Query: 1   MAIAATISLPLTSPSRRSLASIPSLRSSFSSTLQLDSIAKNSARRTSPRLSVSASSAGLE 60
           MA+ A+ISLPLTSPS RSLASIPSLRSSF S LQLDSI KNSARR SPRLSVS +SAGL 
Sbjct: 1   MAMPASISLPLTSPSPRSLASIPSLRSSFCSLLQLDSIGKNSARRRSPRLSVSVTSAGLH 60

Query: 61  VTEKAPSLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIG 120
           VTEKA SLSFL+RRESG LHFVKYHGLGNDFILVDNRDSS+PRITPEQAVKLCDRNFGIG
Sbjct: 61  VTEKASSLSFLERRESGFLHFVKYHGLGNDFILVDNRDSSKPRITPEQAVKLCDRNFGIG 120

Query: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGA 180
           ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFT+HTGA
Sbjct: 121 ADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTVHTGA 180

Query: 181 GLIIPELQDDGQVKVDMGEPILKASDVPTRLTPNRDQSVVKSDIEVDGVTWSVTCVSMGN 240
           GLIIPELQDDGQVKVDMGEPILKASDVPTRL PN D+SVVKSDIEVDGVTWSVTCVSMGN
Sbjct: 181 GLIIPELQDDGQVKVDMGEPILKASDVPTRLAPNADESVVKSDIEVDGVTWSVTCVSMGN 240

Query: 241 PHCVTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGA 300
           PHCVTFGNKI+QNLQVD+INLAAIGPKFEHHEMFPARTNTEFVQVFS SHLKMRVWERGA
Sbjct: 241 PHCVTFGNKIDQNLQVDEINLAAIGPKFEHHEMFPARTNTEFVQVFSKSHLKMRVWERGA 300

Query: 301 GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGS 360
           GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEW+EQ+NHVYMTGPAEV FYGS
Sbjct: 301 GATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWNEQNNHVYMTGPAEVAFYGS 360

Query: 361 VPLQ 365
           VPLQ
Sbjct: 361 VPLQ 364

[Close]

BLAST of Spg012652 vs. TAIR 10
Match: AT3G53580.1 (diaminopimelate epimerase family protein )

HSP 1 Score: 537.7 bits (1384), Expect = 7.1e-153
Identity = 262/360 (72.78%), Postives = 301/360 (83.61%), Query Frame = 0


Query: 5   ATISLPLTSPSRRSLASIPSLRSSFSSTLQLDSIAKNSARRTSPRLSVSASSAGLEVT-E 64
           A +S    +P  R +++  S      S+L      K    + SP L VSA+++   VT E
Sbjct: 4   AAVSTVSVAPQSRRVSNAFSRNLGSVSSLSFGFFEKEYCFK-SPSLRVSAAASMDAVTAE 63

Query: 65  KAPSLSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRITPEQAVKLCDRNFGIGADG 124
           K    SFLD++E+G+LHFVKYHGLGNDFILVDNRDSSEP+IT EQA KLCDRNFG+GADG
Sbjct: 64  KFSPASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADG 123

Query: 125 VIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFTIHTGAGLI 184
           VIFAMPGVNGTDY MRIFNSDGSEPEMCGNGVRCFARFIAELENLQG+HSFTIHTGAGLI
Sbjct: 124 VIFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAGLI 183

Query: 185 IPELQDDGQVKVDMGEPILKASDVPTRLTPNRDQSVVKSDIEVDGVTWSVTCVSMGNPHC 244
           +PE+QDDGQVKVDMG PILKA DVPT+L+ N+ ++VV++++ VDGV+W+VTCVSMGNPHC
Sbjct: 184 VPEIQDDGQVKVDMGTPILKAQDVPTKLSGNKGEAVVEAELVVDGVSWNVTCVSMGNPHC 243

Query: 245 VTFGNKIEQNLQVDDINLAAIGPKFEHHEMFPARTNTEFVQVFSNSHLKMRVWERGAGAT 304
           +TFG K   NL+VDD+NL  IGPKFEHHEMFPARTNTEFV+V S SHLKMRVWERGAGAT
Sbjct: 244 ITFGKKGGPNLKVDDLNLPEIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGAT 303

Query: 305 LACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWSEQDNHVYMTGPAEVVFYGSVPL 364
           LACGTGACA+VVAAVLEGRA R CTVDLPGGPL+IEW ++DNH+YMTGPAE VFYGS  L
Sbjct: 304 LACGTGACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQEDNHIYMTGPAEAVFYGSALL 362

The following BLAST results are available for this feature:

BLAST of Spg012652 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518055.1	2.9e-196	94.23	diaminopimelate epimerase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. ...	[more]
XP_008447504.1	1.8e-195	94.49	PREDICTED: diaminopimelate epimerase, chloroplastic [Cucumis melo] >KAA0047342.1...	[more]
XP_038880931.1	7.0e-195	93.41	diaminopimelate epimerase, chloroplastic-like [Benincasa hispida]	[more]
XP_022977248.1	9.2e-195	94.23	diaminopimelate epimerase, chloroplastic-like [Cucurbita maxima]	[more]
XP_022143907.1	1.2e-194	93.96	diaminopimelate epimerase, chloroplastic [Momordica charantia]	[more]

BLAST of Spg012652 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFG2	1.0e-151	72.78	Diaminopimelate epimerase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DAPF...	[more]
Q2QNF7	2.3e-140	68.09	Diaminopimelate epimerase, chloroplastic OS=Oryza sativa subsp. japonica OX=3994...	[more]
A2ZLS4	5.1e-140	68.44	Putative diaminopimelate epimerase, chloroplastic OS=Oryza sativa subsp. indica ...	[more]
P74667	4.4e-107	65.96	Diaminopimelate epimerase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=111...	[more]
Q116P1	5.7e-107	67.62	Diaminopimelate epimerase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 ...	[more]

BLAST of Spg012652 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TV60	9.0e-196	94.49	Diaminopimelate epimerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3BHL3	9.0e-196	94.49	Diaminopimelate epimerase OS=Cucumis melo OX=3656 GN=LOC103489934 PE=3 SV=1	[more]
A0A6J1IPE7	4.4e-195	94.23	Diaminopimelate epimerase OS=Cucurbita maxima OX=3661 GN=LOC111477617 PE=3 SV=1	[more]
A0A6J1CS73	5.8e-195	93.96	Diaminopimelate epimerase OS=Momordica charantia OX=3673 GN=LOC111013709 PE=3 SV...	[more]
A0A6J1HDJ7	2.2e-194	93.13	Diaminopimelate epimerase OS=Cucurbita moschata OX=3662 GN=LOC111463180 PE=3 SV=...	[more]

BLAST of Spg012652 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53580.1	7.1e-153	72.78	diaminopimelate epimerase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001653	Diaminopimelate epimerase, DapF	TIGRFAM	TIGR00652	TIGR00652	coord: 80..360 e-value: 6.9E-95 score: 315.5
IPR001653	Diaminopimelate epimerase, DapF	PFAM	PF01678	DAP_epimerase	coord: 81..201 e-value: 1.7E-34 score: 118.6 coord: 235..355 e-value: 2.1E-30 score: 105.3
IPR001653	Diaminopimelate epimerase, DapF	PANTHER	PTHR31689	DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC	coord: 43..362
IPR001653	Diaminopimelate epimerase, DapF	HAMAP	MF_00197	DAP_epimerase	coord: 79..363 score: 38.039715
None	No IPR available	GENE3D	3.10.310.10	Diaminopimelate Epimerase; Chain A, domain 1	coord: 67..202 e-value: 5.1E-45 score: 154.9
None	No IPR available	GENE3D	3.10.310.10	Diaminopimelate Epimerase; Chain A, domain 1	coord: 203..353 e-value: 6.3E-60 score: 203.5
None	No IPR available	PANTHER	PTHR31689:SF0	DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC	coord: 43..362
None	No IPR available	SUPERFAMILY	54506	Diaminopimelate epimerase-like	coord: 79..208
None	No IPR available	SUPERFAMILY	54506	Diaminopimelate epimerase-like	coord: 222..360
IPR018510	Diaminopimelate epimerase, active site	PROSITE	PS01326	DAP_EPIMERASE	coord: 142..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg012652.1	Spg012652.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009089	lysine biosynthetic process via diaminopimelate
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008837	diaminopimelate epimerase activity