Spg012588 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAACTGATCGAGCACAATTTTACTCCGACTTCCATTTTTCCGTCATCTTTATCGAATCATAATTCAAATCGTCTCCGCCAATTAGGGCCAGAGAATGTCCCCTTGGCCATGAGACGAGTCCCTGCAAAAATAATTCCCAATCTCCAACCATCAGGCGTTTACCCTAAATCGATCATGGCTAGCGAGGGAACAAGAGAAATCCAGTCAGTTGATTCGAAGAAGAAAGGCGTGGAGGAGAAAGAAGAGAAAGAGAAGAGCGTGAAATTGCCGCCGCCGCCGGATAAGCCGTTGCCGGGAGATTGCTGTGGGAGTGGATGCGTTCGATGTGTGTGGGACGTGTATTACGAAGAGCTTGAAGCTTACAACAAGCTTTGCGAGAAAGGTTCGGCGCCCGATTCTTGA ATGAAACTGATCGAGCACAATTTTACTCCGACTTCCATTTTTCCGTCATCTTTATCGAATCATAATTCAAATCGTCTCCGCCAATTAGGGCCAGAGAATGTCCCCTTGGCCATGAGACGAGTCCCTGCAAAAATAATTCCCAATCTCCAACCATCAGGCGTTTACCCTAAATCGATCATGGCTAGCGAGGGAACAAGAGAAATCCAGTCAGTTGATTCGAAGAAGAAAGGCGTGGAGGAGAAAGAAGAGAAAGAGAAGAGCGTGAAATTGCCGCCGCCGCCGGATAAGCCGTTGCCGGGAGATTGCTGTGGGAGTGGATGCGTTCGATGTGTGTGGGACGTGTATTACGAAGAGCTTGAAGCTTACAACAAGCTTTGCGAGAAAGGTTCGGCGCCCGATTCTTGA ATGAAACTGATCGAGCACAATTTTACTCCGACTTCCATTTTTCCGTCATCTTTATCGAATCATAATTCAAATCGTCTCCGCCAATTAGGGCCAGAGAATGTCCCCTTGGCCATGAGACGAGTCCCTGCAAAAATAATTCCCAATCTCCAACCATCAGGCGTTTACCCTAAATCGATCATGGCTAGCGAGGGAACAAGAGAAATCCAGTCAGTTGATTCGAAGAAGAAAGGCGTGGAGGAGAAAGAAGAGAAAGAGAAGAGCGTGAAATTGCCGCCGCCGCCGGATAAGCCGTTGCCGGGAGATTGCTGTGGGAGTGGATGCGTTCGATGTGTGTGGGACGTGTATTACGAAGAGCTTGAAGCTTACAACAAGCTTTGCGAGAAAGGTTCGGCGCCCGATTCTTGA MKLIEHNFTPTSIFPSSLSNHNSNRLRQLGPENVPLAMRRVPAKIIPNLQPSGVYPKSIMASEGTREIQSVDSKKKGVEEKEEKEKSVKLPPPPDKPLPGDCCGSGCVRCVWDVYYEELEAYNKLCEKGSAPDS Homology
BLAST of Spg012588 vs. NCBI nr
Match: XP_023518260.1 (uncharacterized protein LOC111781791 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 215.3 bits (547), Expect = 3.2e-52 Identity = 110/141 (78.01%), Postives = 119/141 (84.40%), Query Frame = 0
BLAST of Spg012588 vs. NCBI nr
Match: KAG6594792.1 (hypothetical protein SDJN03_11345, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026759.1 SPCP31B10.02, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 213.0 bits (541), Expect = 1.6e-51 Identity = 109/141 (77.30%), Postives = 118/141 (83.69%), Query Frame = 0
BLAST of Spg012588 vs. NCBI nr
Match: XP_022963072.1 (uncharacterized protein LOC111463382 [Cucurbita moschata]) HSP 1 Score: 210.7 bits (535), Expect = 7.8e-51 Identity = 110/142 (77.46%), Postives = 119/142 (83.80%), Query Frame = 0
BLAST of Spg012588 vs. NCBI nr
Match: XP_023003942.1 (uncharacterized protein LOC111497385 [Cucurbita maxima]) HSP 1 Score: 208.4 bits (529), Expect = 3.9e-50 Identity = 107/140 (76.43%), Postives = 116/140 (82.86%), Query Frame = 0
BLAST of Spg012588 vs. NCBI nr
Match: XP_038881411.1 (uncharacterized protein LOC120072947 [Benincasa hispida]) HSP 1 Score: 205.7 bits (522), Expect = 2.5e-49 Identity = 104/133 (78.20%), Postives = 115/133 (86.47%), Query Frame = 0
BLAST of Spg012588 vs. ExPASy Swiss-Prot
Match: Q9USH2 (UPF0651 protein P31B10.02, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCP31B10.02 PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.6e-06 Identity = 21/41 (51.22%), Postives = 30/41 (73.17%), Query Frame = 0
BLAST of Spg012588 vs. ExPASy Swiss-Prot
Match: B1AS42 (NADH-cytochrome b5 reductase-like OS=Mus musculus OX=10090 GN=Cyb5rl PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 4.0e-05 Identity = 21/44 (47.73%), Postives = 29/44 (65.91%), Query Frame = 0
BLAST of Spg012588 vs. ExPASy TrEMBL
Match: A0A6J1HE87 (uncharacterized protein LOC111463382 OS=Cucurbita moschata OX=3662 GN=LOC111463382 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.8e-51 Identity = 110/142 (77.46%), Postives = 119/142 (83.80%), Query Frame = 0
BLAST of Spg012588 vs. ExPASy TrEMBL
Match: A0A6J1KP06 (uncharacterized protein LOC111497385 OS=Cucurbita maxima OX=3661 GN=LOC111497385 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 1.9e-50 Identity = 107/140 (76.43%), Postives = 116/140 (82.86%), Query Frame = 0
BLAST of Spg012588 vs. ExPASy TrEMBL
Match: A0A6J1BUD5 (uncharacterized protein LOC111005446 OS=Momordica charantia OX=3673 GN=LOC111005446 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 2.2e-46 Identity = 106/144 (73.61%), Postives = 114/144 (79.17%), Query Frame = 0
BLAST of Spg012588 vs. ExPASy TrEMBL
Match: A0A0A0KKK8 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G504670 PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.5e-26 Identity = 64/77 (83.12%), Postives = 69/77 (89.61%), Query Frame = 0
BLAST of Spg012588 vs. ExPASy TrEMBL
Match: A0A5D3CL09 (UPF0651 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001550 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 2.5e-26 Identity = 64/83 (77.11%), Postives = 69/83 (83.13%), Query Frame = 0
BLAST of Spg012588 vs. TAIR 10
Match: AT5G17280.1 (CONTAINS InterPro DOMAIN/s: Oxidoreductase-like, N-terminal (InterPro:IPR019180); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 84.3 bits (207), Expect = 7.9e-17 Identity = 36/69 (52.17%), Postives = 49/69 (71.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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