Spg012326 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg012326
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionnuclear pore complex protein NUP62
Locationscaffold1: 18354059 .. 18359037 (-)
RNA-Seq ExpressionSpg012326
SyntenySpg012326
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATCGTCATCGGAAGACTCTGAATCTTGGGCCATAAAACCGGGAATGAAGGCATTTGGAAGTTGGGCCAAAATTTGTGGCTCTTGCCTTCTGTTAGGTGCAGGTTTTTGCCTTCTGTTAGGTGCTGGTTCTTGCCTTCTATTGGGTGCTGGAAGTTCTGGAAAGGCTGGTGGATTAGCGGCTGGTTGGGCGGTGGAGAGGGCAGCAAGTTGTTGGTTAATTTGCTCAATAGCCCTAGAAAGTGTGGCTAGATTTTGATTGATTTCTGCAATGGATGTTTCCACTCGTTGCAGTCGGCGGTCATTGGTGTTGGTGGAGGCTTCCGCGTCCATGAGGAAGGGTGGAATGATCCAAAAAAAATCGTCAAGCCTTGGATCGGGTTGCTCTGATACCAATTTGATGCACACAAGTAATGAAATACCTCAAATCTTATTCATTCAATGCAGAAACTTAATATCACAGCCATATATATAGGCTGGAAAATAACTAATTCACTCTAACTAACTAATTTACAGCAGTGAAAGCCTTTTACTATAAGGTAAAAGCTTTAAATAAATGAAAAGGTAAATGATTTACCGTACACAGTAAAAGTAAAAGATCTTTAATAGATCTTACATCACTATGTTTGCAAGTTGAAGAAGTCTTTATATGGGCTCAAGCAGTCTCCACGGCAGTGGTATAAGAGGTTTGACAGTTATATGATTGAGTTAGGCTACAACAGAAGTTCGTATGATTGTTGTGTGTATCACAACGAGCTTGGTGATGGATTGAAGATTTATCTGGTTCTGTATGTAGATGACATGTTGATAGCTGCTAAGTCCAAGTCTGATATTCTGAAGTTGAAAGACCTTCTCAGTGCTGAATTTGAGATGAAAGATTTGGGTGTTGCTCAGAAAATTTTGGGTATGGAGATTTATAGGGAAAGAGATAAAAAGAAGCTTTTCTTGTCACAGAAAGGATATATTCAGAAGATATTGTCCAGGTTTGGGATGTCTTCAGCTAAGCCTATAGATACTCCTAGTGCTGCAAGTGTTCGTTTGTCTTCTGTACTTGCATCACAATCTGAAGCTGAGAAGGAATACATGTCTCGAGTCCCATATGCTAGTGCATTAGGAAGTTTGATGTATGCTATGGTCTGCACTAGGCCTGATCTTGCACATGCTGTGAGTGTTGTCAGTAGGTTCATGGGGCAACCTAGAAAGGAACATTGGCAAGCTGTGAAGAGGATTTTTCGTTACCTTAGAGGTACATCTGATATTGGTCTCGTTTATGGAAGTGACACTGAATGTTTAGTGACTGGTTATTCTGATTCTGACTATGCTGGAGATGTTGACAGTAGAAGGTCCATGACTGGTTATGTGTTTACCCTTGGTGGTTCTGTTGTTAGTTGGAAGGCAACCCTACAACCTACAGTTACTTTGTCTACTACTGAGGCTGAGTATATGGCACTAACAGAAGCTGCTAAAGAAGCAATATGGTTGAAAGGACTAGTTGGTGACCTTGGTCTGCACCATGATCAGGCTGTTGTATATTGTGATAGTTTGAGTGCAATATGCCTAGCCAAGGATCAAGTTCATCATGAGAGGACTAAGCATATAGATGTTAGATATCACTTCCTGAGAAATGAGAAGAGGATTAAGGTGATGAAAGTTGGGACAGCTGATAACCCCGCTGATATGTTCACCAAGCCAGTTCCAAGTGGCAAGTTCCAACATTGTTTGGACTTGCTAAATGTTCTGAATTGTTAAATGGTCCCTATGGGACCTTATGAAGCAGAGGGAGAATCTGGTGACTTTCGAGTTGCATCTGGTACTTTTCTTTGAGTACATCTGGTTCATCTGTTATGTGTGAGAGAGTTCAAGTCAAGGTGGAAAGTTGTTGATATGCCTTGAATCTGATAGAGATTAGATATGATTTTCGTTTTGGGCTTTTATTTTGGGCCTATTATGTTAGGGTTAAGAGTGGTGCCATATATAAACCCTCTTAACCTATTTTTTGCTCTAATCTCTGTATTCTGAATACTCCTCTCATAATAAGATCGTTCTCTCCCTCTGCCCGTGGATGTAGCTAACACACCGTTAGTGAACCACGTATATCTGTGTGTTGTTTCTCTTCGCCCTTTCATTCTTGTTGCGTTGTTACTGTTTTCGTCATAACATGGTGTGTCATGTGTTCAAAGGATAATGAGACCCTAGGCCACTTATTTAGTTGTTGCTCTTTTGCTCGTTGGTACTGGTCTTATATTTTGGAAGCTTTTGGTTGGAGTTTGGTCTTGCCCTACAATGCGTTTGATCTCACCTCTTTGATATTTGTGGGTCATTCTTTCCATGGAACAAATAAGCTTTTGTGGCTGGCTTTTAATAGGGTGTTCTTTTGGTCTCTTTGGTGTGAAAGAAATAGTAGGATCTTTAGAGACATGACCTCCAATTTTGATATTTTTATAGATTTTATTGTTTTTAATTCTCTTTATTGGTGTAAATGTAACCACCCTTTCTCCGATTATAGCCTTTTGTCTTTAATTGCAAATTGGAAAACATTTACGTAATTCACCTTTAGGTGTTTGGAGTGTGAACTCCTATTTCATTCAATCAATAAAATTGTTTCCCTTCTCTTATTAAAAAAAAATGATGACTATCTAAGCATCATCCACACGTATAAATGTGTGGATGGTGAAGTTTATAGATTAGCCATGTCTTTTTTTAAATATATTTTCAGTACTTCGTTAATGTGTCTATTTTTACTTAATTTGTGTTTGTTCTTTGCAGGTTTTCCTGCTCTGGCTTCTGCTTCCACTGCTGCTACCACCACGTCTGGTTTCAGTGCCTCAAGTCAGAGTCAGACTTCATCAGCTCTTGTTGTATCAAGCAGTAGTAGGTATGTGTATGGTCCTGCTACTTTTTTAGTATCTGTGCTATATAAGAATTAACTAGTGTGGTTTGTCTATCAATGGAGCCAGGATTATATTATTATTTTCATTTTCTTCGGGTTGAATTTGAATCCTCTTCATCTTTTCTTCTATTTCAATGTTATTTCAAGAGGAAGGAAAGCCATGCATTTGAGCTATTAGCTATTATGTTTACTCTGTCTTTAAGATTTTGATAATGCTATTCTCCTTGTTTTGAAGGTATATCTTTTTCATCGTTGTGAGAAGAGATATGATCTAGACATCTATCTATCTATCTATATATATATTTATTAATTTGAGAAGCTCTCTTAACTCATTCCACTATATATTAATACCTGCATGAAATGGTTATTATGAGGAATCTAATGATTACTTTCCACCTGCTTCATCCTCCGTTTATGCAGTGGTACAACTTCAACTGTAAGTGCTGCAGTGTCTACTGCACCAAAATTACCATCTGAGATAACAGGGAAAACGGTTGAAGAGGTACTACTAAATTGCTATTTATTTCTTCATGATTGGGGTTTTGTACAGTGCAGTTTAGTGGTCTATTTTTTTTTTTTTTTAAAACAAGAAACAAAATTTTCGTTGATATAATGAAAAGAGACTAATACTCAAAAGTAAAAACTCAAAAAGGAGTGAAAGGAAAATATAAAAAAGAAACAACAAAACATGAAAAAACCAACCAAAAAACAAGAATACAAACATAGCCATAAAAGAAACCATGTAGGATATAAAAAAGCATTCCAATTAAGATAAATATTTGGAAGAGAAAATCAAACAAAAAAGGCTTTGGGAGGGAACTCCAAGCAGAGGCATTTAGACGGGCATCTTCAAATCTTTCAAGTTAAAGAAGTTGTTTGTTGTGAAAAACTCTTTGATTTCTTTCCAACTATATCTCAGAAAGAATAGCTGTAAATGGTTTTTTTTTTTTTTTGAAAAAAAGCTTTAAATGTATTAATCCAAAGAAAATTAGCTTTAGAATTCAGAAAGTCCTGGAAATAGTTGCAAAACATTATTTTTGAGAGTAAAATGGAATATCAACTGAATATTGAAGATTGAACAATGAAAACAACTTGATCCAGCAGGAAACTATTATTACTCTTACATAAAACTTACTCTTTTGATTCTTCTTCTTACTTGAAGCCTTTTGTTTTGCTGTTGTTGTTGGTGATGGTGTTGTTGTTTGATTTTGGGGATTCAATCTTGGGGATTCAATCGATTCCTGTTTTTGGGGATTAAATCTCTCACTGCTGTTGTCATTGAAGTACGAGTTTTTTTTCTGAAATTAGTTGTGATGATCGATTTTTGTTTCTTTCTAGTTCTTGTTTGATTCTGTTTCCAATACATTTTAATCTTTGGGTTTCAAAACCTTGAAGTAACTAAAGAAAATGGAAGGTTGTTGAGCCAAACAAAGTTGAAGAAACTGTACTGAATTTGAATCTCTTGAAAAAACTCGATTTTAGTCCTCTTCTATTTCCGTTCATATACACAACGTAGAGACAGAATAATTTACAAAATGTAAGCTTTTAAAAAATCAGAGACAAGTGATGGTGAGAGGAAAATCAGATGGATACTGATTTTTAGGAGCTTGATTTGTATGGATCCAAATCAGTTTGATACTGATTTTTCTTGGAGCTAGATTTGTGGATCCAAATCAAATTGATACTGATTTTTAGGAGCTTGATTTGTGGATCCAACTTACTACTGTTAAGGGGATAAACAGAAGGTCTGCTTTCTGTCAGGAAAAAATAGAAAAGGAAAGGTACTGGGTTGCTGTCAGTTAACAAGATTAAAGCTAATTTGGATTACATCACGTGCAAGGAAAATTTAGGCATAATTGCTCCAATTGCTATTAGTTTCATGGTTGGTGCAGCCATTGTTTATGACACCAGCTTTATCGGTACCTCCATGCATGATCCTCTTACTCAGTACAATGACTTTTCGGACCGTTGCCCTTAAACTAGAAGATTTGGAACAGAATGCCCTTTGTGGGGACAAGCAGATCATGGTGCTTCAGCTGCAGTTTTGGAGTGATGTTTTGTTTTGCCTTCTAAATTCTGCTTCATGA

mRNA sequence

ATGCCATCGTCATCGGAAGACTCTGAATCTTGGGCCATAAAACCGGGAATGAAGGCATTTGGAAGTTGGGCCAAAATTTGTGGCTCTTGCCTTCTGTTAGGTGCAGGTTTTTGCCTTCTGTTAGGTGCTGGTTCTTGCCTTCTATTGGGTGCTGGAAGTTCTGGAAAGGCTGGTGGATTAGCGGCTGGTTGGGCGGTGGAGAGGGCAGCAAGTTGTTGTCGGCGGTCATTGGTGTTGGTGGAGGCTTCCGCGTCCATGAGGAAGGGTGGAATGATCCAAAAAAAATCGTCAAGCCTTGGATCGGGTTGCTCTGATACCAATTTGATGCACACAAGTTTTCCTGCTCTGGCTTCTGCTTCCACTGCTGCTACCACCACGTCTGGTTTCAGTGCCTCAAGTCAGAGTCAGACTTCATCAGCTCTTGTTGTATCAAGCAGTAGTAGTGGTACAACTTCAACTGTAAGTGCTGCAGTGTCTACTGCACCAAAATTACCATCTGAGATAACAGGGAAAACGGTTGAAGAGCCATTGTTTATGACACCAGCTTTATCGGTACCTCCATGCATGATCCTCTTACTCAGTACAATGACTTTTCGGACCGTTGCCCTTAAACTAGAAGATTTGGAACAGAATGCCCTTTGTGGGGACAAGCAGATCATGGTGCTTCAGCTGCAGTTTTGGAGTGATGTTTTGTTTTGCCTTCTAAATTCTGCTTCATGA

Coding sequence (CDS)

ATGCCATCGTCATCGGAAGACTCTGAATCTTGGGCCATAAAACCGGGAATGAAGGCATTTGGAAGTTGGGCCAAAATTTGTGGCTCTTGCCTTCTGTTAGGTGCAGGTTTTTGCCTTCTGTTAGGTGCTGGTTCTTGCCTTCTATTGGGTGCTGGAAGTTCTGGAAAGGCTGGTGGATTAGCGGCTGGTTGGGCGGTGGAGAGGGCAGCAAGTTGTTGTCGGCGGTCATTGGTGTTGGTGGAGGCTTCCGCGTCCATGAGGAAGGGTGGAATGATCCAAAAAAAATCGTCAAGCCTTGGATCGGGTTGCTCTGATACCAATTTGATGCACACAAGTTTTCCTGCTCTGGCTTCTGCTTCCACTGCTGCTACCACCACGTCTGGTTTCAGTGCCTCAAGTCAGAGTCAGACTTCATCAGCTCTTGTTGTATCAAGCAGTAGTAGTGGTACAACTTCAACTGTAAGTGCTGCAGTGTCTACTGCACCAAAATTACCATCTGAGATAACAGGGAAAACGGTTGAAGAGCCATTGTTTATGACACCAGCTTTATCGGTACCTCCATGCATGATCCTCTTACTCAGTACAATGACTTTTCGGACCGTTGCCCTTAAACTAGAAGATTTGGAACAGAATGCCCTTTGTGGGGACAAGCAGATCATGGTGCTTCAGCTGCAGTTTTGGAGTGATGTTTTGTTTTGCCTTCTAAATTCTGCTTCATGA

Protein sequence

MPSSSEDSESWAIKPGMKAFGSWAKICGSCLLLGAGFCLLLGAGSCLLLGAGSSGKAGGLAAGWAVERAASCCRRSLVLVEASASMRKGGMIQKKSSSLGSGCSDTNLMHTSFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEPLFMTPALSVPPCMILLLSTMTFRTVALKLEDLEQNALCGDKQIMVLQLQFWSDVLFCLLNSAS
Homology
[Close]
BLAST of Spg012326 vs. NCBI nr
Match: XP_031743587.1 (nuclear pore complex protein NUP62 [Cucumis sativus] >KGN46560.2 hypothetical protein Csa_005518 [Cucumis sativus])

HSP 1 Score: 88.6 bits (218), Expect = 8.0e-14
Identity = 65/98 (66.33%), Postives = 72/98 (73.47%), Query Frame = 0 

Query: 78  VLVEASASMRKGGMIQKKSSSLGSGCSDTNLMHTSFPALASASTAATTTSGFSASSQSQT 137
           V   AS+S   G +     +S  +  S        FP+LASASTAATTTSGFSASSQSQT
Sbjct: 466 VTSSASSSSAIGSLSLPTKTSTAASSSQAPASF-GFPSLASASTAATTTSGFSASSQSQT 525

Query: 138 SSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEE 176
           SSALVV+SSSSGTTSTVSA VS+ PKLPSEITGKTVEE
Sbjct: 526 SSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEE 562

[Close]
BLAST of Spg012326 vs. NCBI nr
Match: XP_008459731.1 (PREDICTED: nuclear pore complex protein NUP62 [Cucumis melo])

HSP 1 Score: 88.6 bits (218), Expect = 8.0e-14
Identity = 65/98 (66.33%), Postives = 72/98 (73.47%), Query Frame = 0 

Query: 78  VLVEASASMRKGGMIQKKSSSLGSGCSDTNLMHTSFPALASASTAATTTSGFSASSQSQT 137
           V   AS+S   G +     +S  +  S        FP+LASASTAATTTSGFSASSQSQT
Sbjct: 470 VTSSASSSSAIGSLSLPTKTSTAASSSQAPASF-GFPSLASASTAATTTSGFSASSQSQT 529

Query: 138 SSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEE 176
           SSALVV+SSSSGTTSTVSA VS+ PKLPSEITGKTVEE
Sbjct: 530 SSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEE 566

[Close]
BLAST of Spg012326 vs. NCBI nr
Match: TYK24755.1 (nuclear pore complex protein NUP62 [Cucumis melo var. makuwa])

HSP 1 Score: 88.6 bits (218), Expect = 8.0e-14
Identity = 65/98 (66.33%), Postives = 72/98 (73.47%), Query Frame = 0 

Query: 78  VLVEASASMRKGGMIQKKSSSLGSGCSDTNLMHTSFPALASASTAATTTSGFSASSQSQT 137
           V   AS+S   G +     +S  +  S        FP+LASASTAATTTSGFSASSQSQT
Sbjct: 55  VTSSASSSSAIGSLSLPTKTSTAASSSQAPASF-GFPSLASASTAATTTSGFSASSQSQT 114

Query: 138 SSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEE 176
           SSALVV+SSSSGTTSTVSA VS+ PKLPSEITGKTVEE
Sbjct: 115 SSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEE 151

[Close]
BLAST of Spg012326 vs. NCBI nr
Match: XP_022156652.1 (nuclear pore complex protein NUP62, partial [Momordica charantia])

HSP 1 Score: 87.0 bits (214), Expect = 2.3e-13
Identity = 56/63 (88.89%), Postives = 59/63 (93.65%), Query Frame = 0 

Query: 113 FPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKT 172
           FP+L SASTAATT+SGFSA SQSQTSS LVV+SSSSGTTSTVSAAVST PKLPSEITGKT
Sbjct: 339 FPSLPSASTAATTSSGFSAPSQSQTSSTLVVASSSSGTTSTVSAAVSTTPKLPSEITGKT 398

Query: 173 VEE 176
           VEE
Sbjct: 399 VEE 401

[Close]
BLAST of Spg012326 vs. NCBI nr
Match: XP_022142426.1 (nuclear pore complex protein NUP62-like isoform X1 [Momordica charantia])

HSP 1 Score: 81.6 bits (200), Expect = 9.8e-12
Identity = 56/64 (87.50%), Postives = 58/64 (90.62%), Query Frame = 0 

Query: 113 FPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVS-TAPKLPSEITGK 172
           FP+LASA TAATTTSGFSA SQSQTSS LVV+SSSSGTTS VSAAVS T PKLPSEITGK
Sbjct: 415 FPSLASAPTAATTTSGFSAPSQSQTSSTLVVASSSSGTTSPVSAAVSTTTPKLPSEITGK 474

Query: 173 TVEE 176
           TVEE
Sbjct: 475 TVEE 478

[Close]
BLAST of Spg012326 vs. ExPASy TrEMBL
Match: A0A5D3DMB1 (Nuclear pore complex protein NUP62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003180 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.9e-14
Identity = 65/98 (66.33%), Postives = 72/98 (73.47%), Query Frame = 0 

Query: 78  VLVEASASMRKGGMIQKKSSSLGSGCSDTNLMHTSFPALASASTAATTTSGFSASSQSQT 137
           V   AS+S   G +     +S  +  S        FP+LASASTAATTTSGFSASSQSQT
Sbjct: 55  VTSSASSSSAIGSLSLPTKTSTAASSSQAPASF-GFPSLASASTAATTTSGFSASSQSQT 114

Query: 138 SSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEE 176
           SSALVV+SSSSGTTSTVSA VS+ PKLPSEITGKTVEE
Sbjct: 115 SSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEE 151

[Close]
BLAST of Spg012326 vs. ExPASy TrEMBL
Match: A0A0A0KA27 (Nsp1_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G108530 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.9e-14
Identity = 65/98 (66.33%), Postives = 72/98 (73.47%), Query Frame = 0 

Query: 78  VLVEASASMRKGGMIQKKSSSLGSGCSDTNLMHTSFPALASASTAATTTSGFSASSQSQT 137
           V   AS+S   G +     +S  +  S        FP+LASASTAATTTSGFSASSQSQT
Sbjct: 610 VTSSASSSSAIGSLSLPTKTSTAASSSQAPASF-GFPSLASASTAATTTSGFSASSQSQT 669

Query: 138 SSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEE 176
           SSALVV+SSSSGTTSTVSA VS+ PKLPSEITGKTVEE
Sbjct: 670 SSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEE 706

[Close]
BLAST of Spg012326 vs. ExPASy TrEMBL
Match: A0A1S3CAD4 (nuclear pore complex protein NUP62 OS=Cucumis melo OX=3656 GN=LOC103498773 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.9e-14
Identity = 65/98 (66.33%), Postives = 72/98 (73.47%), Query Frame = 0 

Query: 78  VLVEASASMRKGGMIQKKSSSLGSGCSDTNLMHTSFPALASASTAATTTSGFSASSQSQT 137
           V   AS+S   G +     +S  +  S        FP+LASASTAATTTSGFSASSQSQT
Sbjct: 470 VTSSASSSSAIGSLSLPTKTSTAASSSQAPASF-GFPSLASASTAATTTSGFSASSQSQT 529

Query: 138 SSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEE 176
           SSALVV+SSSSGTTSTVSA VS+ PKLPSEITGKTVEE
Sbjct: 530 SSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEE 566

[Close]
BLAST of Spg012326 vs. ExPASy TrEMBL
Match: A0A6J1DSI7 (nuclear pore complex protein NUP62 OS=Momordica charantia OX=3673 GN=LOC111023501 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-13
Identity = 56/63 (88.89%), Postives = 59/63 (93.65%), Query Frame = 0 

Query: 113 FPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKT 172
           FP+L SASTAATT+SGFSA SQSQTSS LVV+SSSSGTTSTVSAAVST PKLPSEITGKT
Sbjct: 339 FPSLPSASTAATTSSGFSAPSQSQTSSTLVVASSSSGTTSTVSAAVSTTPKLPSEITGKT 398

Query: 173 VEE 176
           VEE
Sbjct: 399 VEE 401

[Close]
BLAST of Spg012326 vs. ExPASy TrEMBL
Match: A0A6J1CMQ9 (nuclear pore complex protein NUP62-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012564 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 4.7e-12
Identity = 56/64 (87.50%), Postives = 58/64 (90.62%), Query Frame = 0 

Query: 113 FPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVS-TAPKLPSEITGK 172
           FP+LASA TAATTTSGFSA SQSQTSS LVV+SSSSGTTS VSAAVS T PKLPSEITGK
Sbjct: 415 FPSLASAPTAATTTSGFSAPSQSQTSSTLVVASSSSGTTSPVSAAVSTTTPKLPSEITGK 474

Query: 173 TVEE 176
           TVEE
Sbjct: 475 TVEE 478

The following BLAST results are available for this feature:
BLAST of Spg012326 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031743587.18.0e-1466.33nuclear pore complex protein NUP62 [Cucumis sativus] >KGN46560.2 hypothetical pr... [more]
XP_008459731.18.0e-1466.33PREDICTED: nuclear pore complex protein NUP62 [Cucumis melo][more]
TYK24755.18.0e-1466.33nuclear pore complex protein NUP62 [Cucumis melo var. makuwa][more]
XP_022156652.12.3e-1388.89nuclear pore complex protein NUP62, partial [Momordica charantia][more]
XP_022142426.19.8e-1287.50nuclear pore complex protein NUP62-like isoform X1 [Momordica charantia][more]
BLAST of Spg012326 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg012326 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DMB13.9e-1466.33Nuclear pore complex protein NUP62 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A0A0KA273.9e-1466.33Nsp1_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G108530 PE=3... [more]
A0A1S3CAD43.9e-1466.33nuclear pore complex protein NUP62 OS=Cucumis melo OX=3656 GN=LOC103498773 PE=3 ... [more]
A0A6J1DSI71.1e-1388.89nuclear pore complex protein NUP62 OS=Momordica charantia OX=3673 GN=LOC11102350... [more]
A0A6J1CMQ94.7e-1287.50nuclear pore complex protein NUP62-like isoform X2 OS=Momordica charantia OX=367... [more]
BLAST of Spg012326 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg012326.1Spg012326.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0015031 protein transport
cellular_component GO:0005643 nuclear pore
molecular_function GO:0017056 structural constituent of nuclear pore