Spg012149 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg012149
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein SHI RELATED SEQUENCE 1
Location	scaffold1: 5659488 .. 5662087 (+)
RNA-Seq Expression	Spg012149
Synteny	Spg012149

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAGAATAGGTTAGATAACGGTTGTGAGAGACAAGTAGCGGGTTTTTCGCAAAAGGAAGGATGGGGGCAAAAGCTGGTGCGTCGACACGTGGACGGGCGAGAACCATTAGATATGAAGGGAGAATTTTACAGCGTGTGATGAAGATGATCTCGGCACTTGAGAGAGAGAGAGAGAGATGAGATGAGATCCATGGGCAAGGAGGAGAGAGAAGAAGAAGAAGGAAGAAAAGGAAGATAAGAGTGAAGAAGAAACCAGAGAGAGAGAGAAGAAGGGGGGCACTGGTTCAGACTTCAGAGCGAAAAAGGGTCATAACTGCAAAGAGAATCAGAAAGATAAGAAGGGCAGAAGAGAAGGGAAGAGAAATTAGGGAGTGTTTGAGTTGGATGGAGACTTAAATTGAGTTATCAGAAAAACAAAAAAGAAAGAAAAGAAAAAAACTGCGCAGAGGAGAGAGAGAAAAAGAAAAAGAAAGGCATGGCGGCGTTGCAGAGAGAGGTGTAATTCTGGGCCATAAATGTGGATGTATTAGTAACACTGAGAGAGAAGGGAAGAGAGGTAGGGAAATTGAAAAAAGGGGGAATTCAAAGCGTGATTAACGCTGCCCCCACTATCAGCCACCACCAGCCACCCGGCACCAGCAGCTGCAGCAGTTGGTAATTAACTACAACACACACACACACACATCCCTTCATCTCTCTTCTTTTCCCTTTCCAATTTCCATTCCAAAACTAATTTTCTCATACCAGGATTACATTATAATCACCAATTCCCCAATACCCACAATTACCAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCAATTTAAATTTTAAATTCACCGTACCTTCTTCTCCCTTGTGGCCTCCAATTCAGCCCGGGCTTGGACCCTCTGATTATGGATTTTAGGTCACCCTCAGCTTCTGGGTCAGAGCAACAATGTCTGCCTTTTTCACTTTAGGTGGTGGTGGAGGAGGAAGAGGAAGCGAAGACCAAGAAGACCAACAACACAACACCAACCGCCCCAACGAAATTGTTCACCCCGATAATTTGTTTTGGTACAAGGGCAACGTGGAGCTATGGCAGCAGCAGCAGCAGCAGCATCAACAAGAACAAGCTCTCTTCCAATCGCGCTCTCATCACACCAACAACCCTTACTCCTCCCCTCTAGGCGCCGCCCCTCGCCGGAGCTCCGATGAATCCTCCTCCAGATCGGGTAATTTCATGATGATCAGCTCCGGATCGGGCGGAGGGGGAATCAGCTGCCAAGACTGCGGCAACCAAGCGAAAAAAGACTGTAGCCATATGCGGTGCAGGACGTGCTGCAAGAGCCGAGGCTTCGCTTGCCAAACCCATGTGAAAAGCACTTGGGTCCCTGCCGCGAAGCGCCGCGAGCGGCAGGAGAAACTGGCGGCCTTACAAACCCACCACCAACTTCAACTCCATGGCGACACTAACAATCCGAAACGCCACAGAGATTATAACCCCACTTCCTCTTCTTCTCTTGCCTGCACTCTCATCCCCACCAACAACAACAACAACAACAACGCTTCTGGTACAAATACAATCACTCACTCCCACCACTTTAATTTATTTCATTTCCGACTCCTTTTCTTTTCTTTTTCTTTTTAGATTGCGTGTTGCAGATATCAAACTTCTTCTCTCTATAGTAAACCCCATCAACTTTTTCTGTCTTTACTCACTGTTATTCGCTATTTCTGACGAACAATTTATCCTCTGTGTTCAATCACTAATCTCTCCATTTTTATTTACTTTTTTTTCTCTTAATTATTGTTTATTACTCCATGTGTACAATTTTTGAATTTGGGGTTATTCTGAATTTTAGGGTTGGAAATTGGGAATTTCCCGGCGGAGTTGAACTCCCCGGCTGTGTTCCGTTGCGTTCGTGTGAGCTCCGCCGACGATTCCGACGACCAATACGCGTATCAAACGGCGGTGAATATCGGAGGGCATGTTTTCAAGGGAATTCTATACGATCAAGGACCTGAAAATAATTATATTCCAGCGGGTGAGACCTCGTCCGGTGGTGGTGGGAGTAGTAGTGGAGTGCAACCACTGAATTTCATCGCTGGCGCCGCCGATGCCACCACCGCCAGCGGTGGTTCCTCCGCCGCATTACCCTTGCTTGATCCTTCTTCCTTATATTCAACGCCGCTCAATAGCTACATGGCGGGTACGCAATTCTTCCTACCACCAAGATCTTAAAAGAAAAAAACTACACTACCTAGCTAGGCAGCTTCATTTCTTATTCCTCATTTTTCATTTTCTCTCTTTTTTCTGATCTGACGAACTTTTTTTCCATTTATGTTTAATTATGTCTGCATTGCAATAGATCTGCTGAAAATTTGTAGTAAGAAAAAAAAAACCCTTCACTTGATGAGTCCTCACCCCCCCCCCCCCCCTCCTCTTACATTATGTCTAGGAGCAAAATTGTAGAATAATGCGGAAAATTTTATTTCCTTCTTGATTTTGTTTGATTAAATTTTAATTTTGGTTCAAATTTCAATGCGTAGTTTTGAACATATAAAATTATTCTTCTTGAAATCCAAAGTCGTTTTTGTGTACGAC

mRNA sequence

ATGTCTGCCTTTTTCACTTTAGGTGGTGGTGGAGGAGGAAGAGGAAGCGAAGACCAAGAAGACCAACAACACAACACCAACCGCCCCAACGAAATTGTTCACCCCGATAATTTGTTTTGGTACAAGGGCAACGTGGAGCTATGGCAGCAGCAGCAGCAGCAGCATCAACAAGAACAAGCTCTCTTCCAATCGCGCTCTCATCACACCAACAACCCTTACTCCTCCCCTCTAGGCGCCGCCCCTCGCCGGAGCTCCGATGAATCCTCCTCCAGATCGGGTAATTTCATGATGATCAGCTCCGGATCGGGCGGAGGGGGAATCAGCTGCCAAGACTGCGGCAACCAAGCGAAAAAAGACTGTAGCCATATGCGGTGCAGGACGTGCTGCAAGAGCCGAGGCTTCGCTTGCCAAACCCATGTGAAAAGCACTTGGGTCCCTGCCGCGAAGCGCCGCGAGCGGCAGGAGAAACTGGCGGCCTTACAAACCCACCACCAACTTCAACTCCATGGCGACACTAACAATCCGAAACGCCACAGAGATTATAACCCCACTTCCTCTTCTTCTCTTGCCTGCACTCTCATCCCCACCAACAACAACAACAACAACAACGCTTCTGGGTTGGAAATTGGGAATTTCCCGGCGGAGTTGAACTCCCCGGCTGTGTTCCGTTGCGTTCGTGTGAGCTCCGCCGACGATTCCGACGACCAATACGCGTATCAAACGGCGGTGAATATCGGAGGGCATGTTTTCAAGGGAATTCTATACGATCAAGGACCTGAAAATAATTATATTCCAGCGGGTGAGACCTCGTCCGGTGGTGGTGGGAGTAGTAGTGGAGTGCAACCACTGAATTTCATCGCTGGCGCCGCCGATGCCACCACCGCCAGCGGTGGTTCCTCCGCCGCATTACCCTTGCTTGATCCTTCTTCCTTATATTCAACGCCGCTCAATAGCTACATGGCGGGTACGCAATTCTTCCTACCACCAAGATCTTAA

Coding sequence (CDS)

ATGTCTGCCTTTTTCACTTTAGGTGGTGGTGGAGGAGGAAGAGGAAGCGAAGACCAAGAAGACCAACAACACAACACCAACCGCCCCAACGAAATTGTTCACCCCGATAATTTGTTTTGGTACAAGGGCAACGTGGAGCTATGGCAGCAGCAGCAGCAGCAGCATCAACAAGAACAAGCTCTCTTCCAATCGCGCTCTCATCACACCAACAACCCTTACTCCTCCCCTCTAGGCGCCGCCCCTCGCCGGAGCTCCGATGAATCCTCCTCCAGATCGGGTAATTTCATGATGATCAGCTCCGGATCGGGCGGAGGGGGAATCAGCTGCCAAGACTGCGGCAACCAAGCGAAAAAAGACTGTAGCCATATGCGGTGCAGGACGTGCTGCAAGAGCCGAGGCTTCGCTTGCCAAACCCATGTGAAAAGCACTTGGGTCCCTGCCGCGAAGCGCCGCGAGCGGCAGGAGAAACTGGCGGCCTTACAAACCCACCACCAACTTCAACTCCATGGCGACACTAACAATCCGAAACGCCACAGAGATTATAACCCCACTTCCTCTTCTTCTCTTGCCTGCACTCTCATCCCCACCAACAACAACAACAACAACAACGCTTCTGGGTTGGAAATTGGGAATTTCCCGGCGGAGTTGAACTCCCCGGCTGTGTTCCGTTGCGTTCGTGTGAGCTCCGCCGACGATTCCGACGACCAATACGCGTATCAAACGGCGGTGAATATCGGAGGGCATGTTTTCAAGGGAATTCTATACGATCAAGGACCTGAAAATAATTATATTCCAGCGGGTGAGACCTCGTCCGGTGGTGGTGGGAGTAGTAGTGGAGTGCAACCACTGAATTTCATCGCTGGCGCCGCCGATGCCACCACCGCCAGCGGTGGTTCCTCCGCCGCATTACCCTTGCTTGATCCTTCTTCCTTATATTCAACGCCGCTCAATAGCTACATGGCGGGTACGCAATTCTTCCTACCACCAAGATCTTAA

Protein sequence

MSAFFTLGGGGGGRGSEDQEDQQHNTNRPNEIVHPDNLFWYKGNVELWQQQQQQHQQEQALFQSRSHHTNNPYSSPLGAAPRRSSDESSSRSGNFMMISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQEKLAALQTHHQLQLHGDTNNPKRHRDYNPTSSSSLACTLIPTNNNNNNNASGLEIGNFPAELNSPAVFRCVRVSSADDSDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPAGETSSGGGGSSSGVQPLNFIAGAADATTASGGSSAALPLLDPSSLYSTPLNSYMAGTQFFLPPRS

Homology

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BLAST of Spg012149 vs. NCBI nr
Match: XP_004149998.1 (protein SHI RELATED SEQUENCE 1 [Cucumis sativus] >KGN48885.1 hypothetical protein Csa_003789 [Cucumis sativus])

HSP 1 Score: 520.8 bits (1340), Expect = 8.8e-144
Identity = 283/347 (81.56%), Postives = 296/347 (85.30%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQHNTNRPNEIVHP---DNLFWYK-GNVELWQQQQQQ-- 60
           MS FFTLGGGGGGR      D++ N NRPN+ +HP    +LFWYK GNVELWQQQQQQ  
Sbjct: 1   MSGFFTLGGGGGGR------DEEQNNNRPNQFIHPPPDSSLFWYKAGNVELWQQQQQQQH 60

Query: 61  --HQQEQALF--QSRSHHTNNPYSSPLGAAPRRSSDESSSRSGNFMMISSGSGGGGISCQ 120
             H QEQ LF  QSR+  T  PYS+PL     R+SDESSSRSGNFMMISSGSGGGGISCQ
Sbjct: 61  HHHHQEQPLFQTQSRTTTTTTPYSAPLAV---RNSDESSSRSGNFMMISSGSGGGGISCQ 120

Query: 121 DCGNQAKKDCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQEKLAALQTHH------ 180
           DCGNQAKKDCSHMRCRTCCKSRGF C+THVKSTWVPAAKRRERQ+KLAALQTHH      
Sbjct: 121 DCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHHHHHQQ 180

Query: 181 QLQLHGDTNNPKRHRDYNPTSSSSLACTLIPTNNNNNNNASGLEIGNFPAELNSPAVFRC 240
           QLQLHG  NNPKRHRDYN   SSSLACTLIPT    NNN SGLEIGNFPAELNSPAVFRC
Sbjct: 181 QLQLHGGDNNPKRHRDYN---SSSLACTLIPT----NNNTSGLEIGNFPAELNSPAVFRC 240

Query: 241 VRVSSADDSDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPAGETSSGGGGSSSGVQPLN 300
           VRVSSADD+DDQYAYQTAVNIGGHVFKGILYDQGPENNYIP GETSSGGGGSSSGVQPLN
Sbjct: 241 VRVSSADDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGGSSSGVQPLN 300

Query: 301 FIAGAADATTASGGSSAALPLLDPSSLYSTPLNSYMAGTQFFLPPRS 332
           FIAGAADATT SGGS+AALPLLDPSSLYSTPLNS+MAGTQFFLPPRS
Sbjct: 301 FIAGAADATTGSGGSTAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 331

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BLAST of Spg012149 vs. NCBI nr
Match: XP_008440782.1 (PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis melo] >KAA0025701.1 protein SHI RELATED SEQUENCE 1 [Cucumis melo var. makuwa] >TYK12576.1 protein SHI RELATED SEQUENCE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 514.6 bits (1324), Expect = 6.3e-142
Identity = 279/344 (81.10%), Postives = 293/344 (85.17%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQHNTNRPNEIVHP---DNLFWYK-GNVELWQQQQQ--Q 60
           MS FFTLGGGGGGR      +++ N NRPN+ +HP    +LFWYK GNVELWQQQQQ   
Sbjct: 1   MSGFFTLGGGGGGR------EEEQNNNRPNQFIHPPPDSSLFWYKAGNVELWQQQQQHHH 60

Query: 61  HQQEQALF--QSRSHHTNNPYSSPLGAAPRRSSDESSSRSGNFMMISSGSGGGGISCQDC 120
           H QEQ LF  QSR+  T  PYS+PL     R+SDESSSRSGNFMMISSGSGGGGISCQDC
Sbjct: 61  HHQEQPLFQTQSRTTTTTTPYSAPLTV---RNSDESSSRSGNFMMISSGSGGGGISCQDC 120

Query: 121 GNQAKKDCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQEKLAALQTHH-----QLQ 180
           GNQAKKDCSHMRCRTCCKSRGF C+THVKSTWVPAAKRRERQ+KLAALQTHH     QLQ
Sbjct: 121 GNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHHHQQQQLQ 180

Query: 181 LHGDTNNPKRHRDYNPTSSSSLACTLIPTNNNNNNNASGLEIGNFPAELNSPAVFRCVRV 240
           LHG  NNPKRHRDYN   SSSLACTLIPT    NNN SGLEIGNFPAELNSPAVFRCVRV
Sbjct: 181 LHGGDNNPKRHRDYN---SSSLACTLIPT----NNNTSGLEIGNFPAELNSPAVFRCVRV 240

Query: 241 SSADDSDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPAGETSSGGGGSSSGVQPLNFIA 300
           SSADD+DDQYAYQTAVNIGGHVFKGILYDQGPENNYIP GETSSGGGGSSSGVQPLNFI 
Sbjct: 241 SSADDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGGSSSGVQPLNFIT 300

Query: 301 GAADATTASGGSSAALPLLDPSSLYSTPLNSYMAGTQFFLPPRS 332
           GAAD TT SGGS+AALPLLDPSSLYSTPLNS+MAGTQFFLPPRS
Sbjct: 301 GAADTTTGSGGSTAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 328

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BLAST of Spg012149 vs. NCBI nr
Match: XP_038881348.1 (protein SHI RELATED SEQUENCE 1-like [Benincasa hispida])

HSP 1 Score: 503.8 bits (1296), Expect = 1.1e-138
Identity = 272/330 (82.42%), Postives = 289/330 (87.58%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQHNTNRPNEIVHP--DNLFWYKGNVELWQQQQQQHQQE 60
           MS FFTLGGGGGGR  ED +DQ    NRPN+I+ P   +LFWYKGNVELWQQQ QQ QQE
Sbjct: 1   MSGFFTLGGGGGGR--EDHQDQHQQHNRPNQIIPPPDTSLFWYKGNVELWQQQPQQ-QQE 60

Query: 61  QALF--QSRSHHTNNPYSSPLGAAPRRSSDESSSRSGNFMMISSGSGGGGISCQDCGNQA 120
           Q LF  QSR+  T  PYS+ +   P R+SDESSSRSGNFMMISSGSGGGGISCQDCGNQA
Sbjct: 61  QPLFQTQSRTTTTTPPYSATI---PLRNSDESSSRSGNFMMISSGSGGGGISCQDCGNQA 120

Query: 121 KKDCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQEKLAALQT----HHQLQLHGDT 180
           KKDCSHMRCRTCCKSRGF C+THVKSTWVPAAKRRERQ+KLAALQ+    HHQL LHGD 
Sbjct: 121 KKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQSHHHHHHQLHLHGD- 180

Query: 181 NNPKRHRDYNPTSSSSLACTLIPTNNNNNNNASGLEIGNFPAELNSPAVFRCVRVSSADD 240
           NNPKRHRDYNPTS+SSLACTLIPT    NNN SGLEIGNFPAELNSPAVFRCVRVSS DD
Sbjct: 181 NNPKRHRDYNPTSTSSLACTLIPT----NNNTSGLEIGNFPAELNSPAVFRCVRVSSTDD 240

Query: 241 SDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPAGETSSGGGGSSSGVQPLNFIAGAADA 300
           +D+QYAYQTAVNIGGHVFKGILYDQGPENNYIP  ETSSGGGGSSSGVQPLNFIAGAADA
Sbjct: 241 TDEQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQPLNFIAGAADA 300

Query: 301 TTASGGSSAALPLLDPSSLYSTPLNSYMAG 323
           TTASGGS+AALPL+DPSSLYSTPLNS+MAG
Sbjct: 301 TTASGGSTAALPLMDPSSLYSTPLNSFMAG 319

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BLAST of Spg012149 vs. NCBI nr
Match: KAG6603931.1 (Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 500.0 bits (1286), Expect = 1.6e-137
Identity = 270/341 (79.18%), Postives = 282/341 (82.70%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQHNTNRPNEIVHPDNLFWYKGNVELWQQQQQQH----Q 60
           MS FF+LGGGG     E QE Q H  ++ N   +P+ LFWYKGNVELWQQQ   H    Q
Sbjct: 1   MSGFFSLGGGGREDHQEHQEHQDHQEHQQNNDTNPETLFWYKGNVELWQQQHHHHHQHPQ 60

Query: 61  QEQALFQSRSHHTNNPYSSPLGAAPRRSSDESSSRSGNFMMISSGSGGGGISCQDCGNQA 120
           QEQ LFQ++S     PYS+   A P R+SDESSSRSGNFMMI SGSGGGGISCQDCGNQA
Sbjct: 61  QEQPLFQTQS---RTPYSA---ALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQA 120

Query: 121 KKDCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQEKLAALQTHHQLQLHGDTNNPK 180
           KKDC HMRCRTCCKSRGF C+THVKSTWVPAAKRRERQEKLAALQT HQL LHGD NNPK
Sbjct: 121 KKDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGD-NNPK 180

Query: 181 RHRDYNPTSSSSLACTLIPTNNNNNNNASGLEIGNFPAELNSPAVFRCVRVSSADDSDDQ 240
           RHRDYNPTSSSSLACTLIP      NN SGLEIGNFPAELNSPAVFRCVRVSS D+SDDQ
Sbjct: 181 RHRDYNPTSSSSLACTLIP------NNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQ 240

Query: 241 YAYQTAVNIGGHVFKGILYDQGPENNYIPAGETSS------GGGGSSSGVQPLNFIAGAA 300
           YAYQTAVNIGGHVFKGILYDQGPE NYIP  ETSS      GGGGSSSGVQPLNFI GA 
Sbjct: 241 YAYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGGGGGSSSGVQPLNFITGAT 300

Query: 301 DATTASGGSSAALPLLDPSSLYSTPLNSYMAGTQFFLPPRS 332
           DATTASGGSSAALPLLDPSSLYSTPLNS+MAGTQFFLPPRS
Sbjct: 301 DATTASGGSSAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 328

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BLAST of Spg012149 vs. NCBI nr
Match: XP_022979003.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022979004.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima])

HSP 1 Score: 499.2 bits (1284), Expect = 2.7e-137
Identity = 271/338 (80.18%), Postives = 284/338 (84.02%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQHNTNRPNEIVHPDNLFWYKGNVELWQQQQQQH--QQE 60
           MS FF+LGGG    G ED +D Q N +      +P+ LFWYKGNVELWQQQQ  H  QQE
Sbjct: 1   MSGFFSLGGG----GREDHQDHQQNND-----TNPETLFWYKGNVELWQQQQHHHHPQQE 60

Query: 61  QALFQSRSHHTNNPYSSPLGAAPRRSSDESSSRSGNFMMISSGSGGGGISCQDCGNQAKK 120
           Q LFQ++S     PYS+PL   P R+SDESSSRSGNFMMI SGSGGGGISCQDCGNQAKK
Sbjct: 61  QPLFQTQS---RIPYSAPL---PVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKK 120

Query: 121 DCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQEKLAALQTHHQLQLHGDTNNPKRH 180
           DC+HMRCRTCCKSRGF C+THVKSTWVPAAKRRERQEKLAALQT HQL LHGD NNPKRH
Sbjct: 121 DCAHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGD-NNPKRH 180

Query: 181 RDYNPTSSSSLACTLIPTNNNNNNNASGLEIGNFPAELNSPAVFRCVRVSSADDSDDQYA 240
           RDYNPTSSSSLACTLIP      NN SGLEIGNFPAELNSPAVFRCVRVSS D+SDDQYA
Sbjct: 181 RDYNPTSSSSLACTLIP------NNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYA 240

Query: 241 YQTAVNIGGHVFKGILYDQGPENNYIPAGETSS-----GGGGSSSGVQPLNFIAGAADAT 300
           YQTAVNIGGHVFKGILYDQGPE NYIP  ETSS     GGGGSSSGVQPLNFI GA DAT
Sbjct: 241 YQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGGGGSSSGVQPLNFITGATDAT 300

Query: 301 TASGGSSAALPLLDPSSLYSTPLNSYMAGTQFFLPPRS 332
           TASGGSSAALPLLDPSSLYSTPLNS+MAGTQFFLPPRS
Sbjct: 301 TASGGSSAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 316

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BLAST of Spg012149 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 300.1 bits (767), Expect = 3.2e-80
Identity = 192/389 (49.36%), Postives = 240/389 (61.70%), Query Frame = 0


Query: 1   MSAFFTL--GGGGGGRGSEDQEDQQHNTNRPNEIVHPDNLFWYK---------------- 60
           M+ FF+L  GGGGGG G  +QED + NTN P  +   +   WY+                
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPV--SEAWLWYRNPNVNANANTNVNANA 60

Query: 61  --------GNVELWQQQQQQHQQEQALFQSRSHHTN-NPYSSP--LGAAPR--------- 120
                   G +ELW    Q H Q++ +FQ + H    + YSS   LG  P          
Sbjct: 61  PSSSNAALGTLELW----QNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISG 120

Query: 121 RSSDESSSRSGNFMMI---SSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFACQTH 180
            +S   + R+   MMI    SG G GG+SCQDCGNQAKKDCSHMRCRTCCKSRGF C TH
Sbjct: 121 ETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTH 180

Query: 181 VKSTWVPAAKRRERQEKLAALQTHHQLQLHGDTNNPKRHRDYNPTSSSSLACTLIPTNNN 240
           V+STWVPAAKRRERQ++LA +Q   Q QL    + PKRHR+  P +SSSL CT IP++  
Sbjct: 181 VRSTWVPAAKRRERQQQLATVQP--QTQLPRGESVPKRHRENLPATSSSLVCTRIPSH-- 240

Query: 241 NNNNASGLEIGNFPAELNSPAVFRCVRVSSADDSDDQYAYQTAVNIGGHVFKGILYDQGP 300
                SGLE+GNFPAE++S AVFRCVRVSS +D ++++AYQTAV+IGGH+FKGILYD GP
Sbjct: 241 -----SGLEVGNFPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGP 300

Query: 301 EN------NYIPAGETSSGGGGSSSGVQPLNFI-AGAADATTAS------GG----SSAA 332
            +      N + AGE+SSGGGG+    Q LN I AG+    TAS      GG    S+AA
Sbjct: 301 GSSGGGGYNVVAAGESSSGGGGA----QQLNLITAGSVTVATASSSTPNLGGIGSSSAAA 360

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BLAST of Spg012149 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 6.7e-70
Identity = 178/366 (48.63%), Postives = 219/366 (59.84%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQHNTNRPNEIVHPDNLFW----------------YKGN 60
           M+ FF+LG GGGG      ++ + NTN P+     ++  W                YKG 
Sbjct: 1   MAGFFSLGHGGGG---NTPDNHRTNTNNPSS-SGTESWLWCRNPNSNADGGEAGPSYKGT 60

Query: 61  VELWQ---------QQQQQHQQEQALFQSRSHHTNNPYSSPLGAAP-RRSSDESSSRSGN 120
           +ELWQ         QQQQQ QQ   L+ S         ++ LG  P  RS  E+S   G 
Sbjct: 61  LELWQHPNNQEIIFQQQQQQQQRLDLYTS---------AAGLGVGPSNRSLIETS--GGA 120

Query: 121 FMMISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQ 180
            MM+ SGSG GG SCQDCGNQ+KKDCSHMRCRTCCKSRG  C THVKSTWVPAAKRRERQ
Sbjct: 121 LMMMRSGSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQ 180

Query: 181 EKLAALQTHHQLQLHGDTNNPKRHRDYNPTSSSSLACTLIPTNNNNNNNASGLEIGNFPA 240
           ++L+  Q   QL      + PKR R+  P  S+S+A T IP     +NN SGLE+GNFP 
Sbjct: 181 QQLSTGQQPQQL----GGSVPKRQRERIPARSTSMAYTRIP-----SNNTSGLEVGNFPP 240

Query: 241 ELNSPAVFRCVRVSSADDSDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPAGETSSGGG 300
           E++S AVFRCVRVSS DD +++YAY+TAV+IGGHVFKG+LYDQGP        E SS GG
Sbjct: 241 EVSSSAVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQGP-------AERSSSGG 300

Query: 301 GSSSGVQPLNFIAGAADATTASGG--------SSAALPLLDPSSL-YSTPLNSYMAGTQF 332
           GS    QPLN I     A+++S           S +   +DP+SL Y TP+N++M GT F
Sbjct: 301 GS----QPLNLITAGPSASSSSPNVSCNNGVVGSTSDHYIDPASLNYPTPINTFMTGTHF 331

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BLAST of Spg012149 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.8e-68
Identity = 177/368 (48.10%), Postives = 224/368 (60.87%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQHNTNRPNEIVHPDNLFWYKG----------------N 60
           M+ FF+LG      G+++Q+ Q+ ++++       +N F Y+                  
Sbjct: 1   MANFFSLG------GNQEQQHQEISSSQALVPTESNNWFLYRNEHHHHHHNQEIPNTYKG 60

Query: 61  VELWQ-----QQQQQHQQEQALFQSRSHHTNNPYSSP--LGAAPRRS------SDESSSR 120
            ELWQ     Q Q QH Q+Q  F+   +   + YS+   LG  P RS       D  +SR
Sbjct: 61  FELWQSGNTPQHQHQHHQQQQQFRHPIYPLQDLYSTDVGLGVGPSRSGFDISAGDHEASR 120

Query: 121 SGNFMMISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRR 180
           SG  MM    SGGGGISCQDCGNQAKKDC HMRCRTCCKSRGF CQTHVKSTWVPAAKRR
Sbjct: 121 SGFVMM---RSGGGGISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVPAAKRR 180

Query: 181 ERQEKLAALQTHHQLQLHGDTNNPKRHRDYNPTSSSSLACTLIPTNNNNNNNASGLEIGN 240
           ERQ++LAALQ   Q   + + NN K  R     S+SSL  T +P+N N      GLE+G 
Sbjct: 181 ERQQQLAALQQQQQGH-NNNNNNHKNKRQREDPSASSLVSTRLPSNTN------GLEVGK 240

Query: 241 FPAELNSPAVFRCVRVSSADDSDDQYAYQTAVNIGGHVFKGILYDQGPE---NNYIPAGE 300
           FP+++ + AVF+C+++SS +D +DQ AYQ AV+IGGHVFKGILYDQG E   NN + AG 
Sbjct: 241 FPSKVRTSAVFQCIQMSSIEDDEDQLAYQAAVSIGGHVFKGILYDQGHESQYNNMVAAGG 300

Query: 301 TSSGGGGSSSGVQPLNF-IAGAADATTASGGSSAAL---PLLDPSSLYSTPLNSYM-AGT 332
            +S  GGS+ GVQ  +   A  A ATT SGG + A      LDP SL+  PL+++M AGT
Sbjct: 301 DTS-SGGSAGGVQHHHHNSAAVATATTTSGGDATAAGPSNFLDP-SLFPAPLSTFMVAGT 350

[Close]

BLAST of Spg012149 vs. ExPASy Swiss-Prot
Match: Q9LQZ5 (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 6.9e-59
Identity = 167/372 (44.89%), Postives = 211/372 (56.72%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQ-----HNTNRPNEI-VHPDNLFWYKGNVELWQQ---Q 60
           M+ FF LGG      +  Q+  Q     H+ ++ N + ++ D ++      E+W     Q
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKGFEIWPPQYFQ 60

Query: 61  QQQHQQEQALFQSRSHHTNNPYSSPLGAAPRRSSDESS---SRSGNFMMISSGSGG---- 120
           QQ+HQQ+Q   Q + H +        G  P  SS  ++   SRS  F ++S    G    
Sbjct: 61  QQEHQQQQ---QQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTV 120

Query: 121 ---GGISCQDCGNQAKKDCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQEKLAALQ 180
              GG++CQDCGNQAKKDC HMRCRTCCKSRGF CQTHVKSTWVPAAKRRER  +LA+LQ
Sbjct: 121 TRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQ 180

Query: 181 THHQLQLHGDTNNPKRHR-----------DYNPTSSSSLACTLIPTNNNNNNNASGLEIG 240
            HH      +T N KR R           D++    S+LA T +   N+N    SGLE+ 
Sbjct: 181 -HHSASSR-ETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSN----SGLEVS 240

Query: 241 -NFPAELNSPAVFRCVRVSS-ADDSDDQ-YAYQTAVNIGGHVFKGILYDQGPENNYIPAG 300
            + P E+NSPA+FRCVRVSS  +D DDQ YAYQTAVNIGGH+FKGILYDQGPE+      
Sbjct: 241 QHLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEH------ 300

Query: 301 ETSSGGGGSSSGVQPLNFIAGAADAT--------TASGGSSAALPLLDPSSLYSTPLNSY 332
                          LN +A  A  T        T +G ++  L +LDPSSLY   LNS+
Sbjct: 301 ----------QDNHHLNLLASTATTTNVEETATKTVTGNNNNGL-MLDPSSLYPAQLNSF 346

[Close]

BLAST of Spg012149 vs. ExPASy Swiss-Prot
Match: Q9FXH7 (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.1e-51
Identity = 153/362 (42.27%), Postives = 209/362 (57.73%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQHNTNRPNE--IVHPDNLFWYKGNVELWQQQQQQHQQE 60
           M+  F LGG    +    QE + HN ++ N    ++ D ++      E++  Q  Q QQ+
Sbjct: 1   MAGLFYLGGRDHNKQDHHQE-KDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQYFQQQQQ 60

Query: 61  QALFQSRSHHTNNPYSSPLGAAP---RRSSDESSSRSGNFMMIS------SGSGG----- 120
               Q+ +    N YS   G  P     +++ S++RS  F ++S      S +GG     
Sbjct: 61  ----QNHAAAPTNLYS--FGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTR 120

Query: 121 -GGISCQDCGNQAKKDCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQEKLAALQTH 180
            G ++CQDCGNQAKKDC HMRCRTCCKSRGF CQTHVKSTWV AAKRRERQ +LA L   
Sbjct: 121 QGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAK 180

Query: 181 HQLQLH----GDTNNPKRHRDYNPT--SSSSLACTLIPTNNNNNNNASGLEIGNFPAELN 240
                +    GD ++  +  + N +    S+LACT +      N ++SGLE  + P E++
Sbjct: 181 RIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVV-----NASSSGLETSHLPPEIS 240

Query: 241 SPAVFRCVRVSSADDSDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPAGETSSGGGGSS 300
           SPAVFRC+RVSS DD D++YAYQTAV+IGGHVFKGILYDQGP +++      SS   G +
Sbjct: 241 SPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDH---HRYSSSLNGET 300

Query: 301 SGVQPLNFI-----AGAADATTASGGSSAALPLLDPSSLY---STPLNSYMA-GTQFFLP 331
           S    LN +     A   +A TA   ++ +   +DPSSLY   +TP N+++A GT FF  
Sbjct: 301 SHQHHLNLMDSTPSAATTNAVTAVNTNNGS---IDPSSLYTAVATPFNAFVAGGTPFFAS 344

[Close]

BLAST of Spg012149 vs. ExPASy TrEMBL
Match: A0A0A0KGL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504650 PE=3 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 4.2e-144
Identity = 283/347 (81.56%), Postives = 296/347 (85.30%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQHNTNRPNEIVHP---DNLFWYK-GNVELWQQQQQQ-- 60
           MS FFTLGGGGGGR      D++ N NRPN+ +HP    +LFWYK GNVELWQQQQQQ  
Sbjct: 1   MSGFFTLGGGGGGR------DEEQNNNRPNQFIHPPPDSSLFWYKAGNVELWQQQQQQQH 60

Query: 61  --HQQEQALF--QSRSHHTNNPYSSPLGAAPRRSSDESSSRSGNFMMISSGSGGGGISCQ 120
             H QEQ LF  QSR+  T  PYS+PL     R+SDESSSRSGNFMMISSGSGGGGISCQ
Sbjct: 61  HHHHQEQPLFQTQSRTTTTTTPYSAPLAV---RNSDESSSRSGNFMMISSGSGGGGISCQ 120

Query: 121 DCGNQAKKDCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQEKLAALQTHH------ 180
           DCGNQAKKDCSHMRCRTCCKSRGF C+THVKSTWVPAAKRRERQ+KLAALQTHH      
Sbjct: 121 DCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHHHHHQQ 180

Query: 181 QLQLHGDTNNPKRHRDYNPTSSSSLACTLIPTNNNNNNNASGLEIGNFPAELNSPAVFRC 240
           QLQLHG  NNPKRHRDYN   SSSLACTLIPT    NNN SGLEIGNFPAELNSPAVFRC
Sbjct: 181 QLQLHGGDNNPKRHRDYN---SSSLACTLIPT----NNNTSGLEIGNFPAELNSPAVFRC 240

Query: 241 VRVSSADDSDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPAGETSSGGGGSSSGVQPLN 300
           VRVSSADD+DDQYAYQTAVNIGGHVFKGILYDQGPENNYIP GETSSGGGGSSSGVQPLN
Sbjct: 241 VRVSSADDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGGSSSGVQPLN 300

Query: 301 FIAGAADATTASGGSSAALPLLDPSSLYSTPLNSYMAGTQFFLPPRS 332
           FIAGAADATT SGGS+AALPLLDPSSLYSTPLNS+MAGTQFFLPPRS
Sbjct: 301 FIAGAADATTGSGGSTAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 331

[Close]

BLAST of Spg012149 vs. ExPASy TrEMBL
Match: A0A5A7SN81 (Protein SHI RELATED SEQUENCE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001580 PE=3 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 3.0e-142
Identity = 279/344 (81.10%), Postives = 293/344 (85.17%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQHNTNRPNEIVHP---DNLFWYK-GNVELWQQQQQ--Q 60
           MS FFTLGGGGGGR      +++ N NRPN+ +HP    +LFWYK GNVELWQQQQQ   
Sbjct: 1   MSGFFTLGGGGGGR------EEEQNNNRPNQFIHPPPDSSLFWYKAGNVELWQQQQQHHH 60

Query: 61  HQQEQALF--QSRSHHTNNPYSSPLGAAPRRSSDESSSRSGNFMMISSGSGGGGISCQDC 120
           H QEQ LF  QSR+  T  PYS+PL     R+SDESSSRSGNFMMISSGSGGGGISCQDC
Sbjct: 61  HHQEQPLFQTQSRTTTTTTPYSAPLTV---RNSDESSSRSGNFMMISSGSGGGGISCQDC 120

Query: 121 GNQAKKDCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQEKLAALQTHH-----QLQ 180
           GNQAKKDCSHMRCRTCCKSRGF C+THVKSTWVPAAKRRERQ+KLAALQTHH     QLQ
Sbjct: 121 GNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHHHQQQQLQ 180

Query: 181 LHGDTNNPKRHRDYNPTSSSSLACTLIPTNNNNNNNASGLEIGNFPAELNSPAVFRCVRV 240
           LHG  NNPKRHRDYN   SSSLACTLIPT    NNN SGLEIGNFPAELNSPAVFRCVRV
Sbjct: 181 LHGGDNNPKRHRDYN---SSSLACTLIPT----NNNTSGLEIGNFPAELNSPAVFRCVRV 240

Query: 241 SSADDSDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPAGETSSGGGGSSSGVQPLNFIA 300
           SSADD+DDQYAYQTAVNIGGHVFKGILYDQGPENNYIP GETSSGGGGSSSGVQPLNFI 
Sbjct: 241 SSADDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGGSSSGVQPLNFIT 300

Query: 301 GAADATTASGGSSAALPLLDPSSLYSTPLNSYMAGTQFFLPPRS 332
           GAAD TT SGGS+AALPLLDPSSLYSTPLNS+MAGTQFFLPPRS
Sbjct: 301 GAADTTTGSGGSTAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 328

[Close]

BLAST of Spg012149 vs. ExPASy TrEMBL
Match: A0A1S3B2J6 (protein SHI RELATED SEQUENCE 1 OS=Cucumis melo OX=3656 GN=LOC103485098 PE=3 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 3.0e-142
Identity = 279/344 (81.10%), Postives = 293/344 (85.17%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQHNTNRPNEIVHP---DNLFWYK-GNVELWQQQQQ--Q 60
           MS FFTLGGGGGGR      +++ N NRPN+ +HP    +LFWYK GNVELWQQQQQ   
Sbjct: 1   MSGFFTLGGGGGGR------EEEQNNNRPNQFIHPPPDSSLFWYKAGNVELWQQQQQHHH 60

Query: 61  HQQEQALF--QSRSHHTNNPYSSPLGAAPRRSSDESSSRSGNFMMISSGSGGGGISCQDC 120
           H QEQ LF  QSR+  T  PYS+PL     R+SDESSSRSGNFMMISSGSGGGGISCQDC
Sbjct: 61  HHQEQPLFQTQSRTTTTTTPYSAPLTV---RNSDESSSRSGNFMMISSGSGGGGISCQDC 120

Query: 121 GNQAKKDCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQEKLAALQTHH-----QLQ 180
           GNQAKKDCSHMRCRTCCKSRGF C+THVKSTWVPAAKRRERQ+KLAALQTHH     QLQ
Sbjct: 121 GNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHHHQQQQLQ 180

Query: 181 LHGDTNNPKRHRDYNPTSSSSLACTLIPTNNNNNNNASGLEIGNFPAELNSPAVFRCVRV 240
           LHG  NNPKRHRDYN   SSSLACTLIPT    NNN SGLEIGNFPAELNSPAVFRCVRV
Sbjct: 181 LHGGDNNPKRHRDYN---SSSLACTLIPT----NNNTSGLEIGNFPAELNSPAVFRCVRV 240

Query: 241 SSADDSDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPAGETSSGGGGSSSGVQPLNFIA 300
           SSADD+DDQYAYQTAVNIGGHVFKGILYDQGPENNYIP GETSSGGGGSSSGVQPLNFI 
Sbjct: 241 SSADDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGGSSSGVQPLNFIT 300

Query: 301 GAADATTASGGSSAALPLLDPSSLYSTPLNSYMAGTQFFLPPRS 332
           GAAD TT SGGS+AALPLLDPSSLYSTPLNS+MAGTQFFLPPRS
Sbjct: 301 GAADTTTGSGGSTAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 328

[Close]

BLAST of Spg012149 vs. ExPASy TrEMBL
Match: A0A6J1IUW1 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478781 PE=3 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.3e-137
Identity = 271/338 (80.18%), Postives = 284/338 (84.02%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQHNTNRPNEIVHPDNLFWYKGNVELWQQQQQQH--QQE 60
           MS FF+LGGG    G ED +D Q N +      +P+ LFWYKGNVELWQQQQ  H  QQE
Sbjct: 1   MSGFFSLGGG----GREDHQDHQQNND-----TNPETLFWYKGNVELWQQQQHHHHPQQE 60

Query: 61  QALFQSRSHHTNNPYSSPLGAAPRRSSDESSSRSGNFMMISSGSGGGGISCQDCGNQAKK 120
           Q LFQ++S     PYS+PL   P R+SDESSSRSGNFMMI SGSGGGGISCQDCGNQAKK
Sbjct: 61  QPLFQTQS---RIPYSAPL---PVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKK 120

Query: 121 DCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQEKLAALQTHHQLQLHGDTNNPKRH 180
           DC+HMRCRTCCKSRGF C+THVKSTWVPAAKRRERQEKLAALQT HQL LHGD NNPKRH
Sbjct: 121 DCAHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGD-NNPKRH 180

Query: 181 RDYNPTSSSSLACTLIPTNNNNNNNASGLEIGNFPAELNSPAVFRCVRVSSADDSDDQYA 240
           RDYNPTSSSSLACTLIP      NN SGLEIGNFPAELNSPAVFRCVRVSS D+SDDQYA
Sbjct: 181 RDYNPTSSSSLACTLIP------NNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYA 240

Query: 241 YQTAVNIGGHVFKGILYDQGPENNYIPAGETSS-----GGGGSSSGVQPLNFIAGAADAT 300
           YQTAVNIGGHVFKGILYDQGPE NYIP  ETSS     GGGGSSSGVQPLNFI GA DAT
Sbjct: 241 YQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGGGGSSSGVQPLNFITGATDAT 300

Query: 301 TASGGSSAALPLLDPSSLYSTPLNSYMAGTQFFLPPRS 332
           TASGGSSAALPLLDPSSLYSTPLNS+MAGTQFFLPPRS
Sbjct: 301 TASGGSSAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 316

[Close]

BLAST of Spg012149 vs. ExPASy TrEMBL
Match: A0A6J1GE84 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453153 PE=3 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 5.0e-137
Identity = 269/339 (79.35%), Postives = 282/339 (83.19%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQHNTNRPNEIVHPDNLFWYKGNVELWQQQQQQH---QQ 60
           MS FF+LGGGG     E Q+ Q H  ++ N   +P+ LFWYKGNVELWQQQ   H   QQ
Sbjct: 1   MSGFFSLGGGG---REEHQDHQDHQEHQQNNDTNPETLFWYKGNVELWQQQHHHHQHPQQ 60

Query: 61  EQALFQSRSHHTNNPYSSPLGAAPRRSSDESSSRSGNFMMISSGSGGGGISCQDCGNQAK 120
           EQ LFQ++S     PYS+   A P R+SDESSSRSGNFMMI SGSGGGGISCQDCGNQAK
Sbjct: 61  EQPLFQTQS---RTPYSA---ALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAK 120

Query: 121 KDCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQEKLAALQTHHQLQLHGDTNNPKR 180
           KDC HMRCRTCCKSRGF C+THVKSTWVPAAKRRERQEKLAALQT HQL LHGD NNPKR
Sbjct: 121 KDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGD-NNPKR 180

Query: 181 HRDYNPTSSSSLACTLIPTNNNNNNNASGLEIGNFPAELNSPAVFRCVRVSSADDSDDQY 240
           HRDYNPTSSSSLACTLIP      NN SGLEIGNFPAELNSPAVFRCVRVSS D+SDDQY
Sbjct: 181 HRDYNPTSSSSLACTLIP------NNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQY 240

Query: 241 AYQTAVNIGGHVFKGILYDQGPENNYIPAGETSS-----GGGGSSSGVQPLNFIAGAADA 300
           AYQTAVNIGGHVFKGILYDQGPE NYIP  ETSS     GGGGSSSGVQPLNFI GA DA
Sbjct: 241 AYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGGGGSSSGVQPLNFITGATDA 300

Query: 301 TTASGGSSAALPLLDPSSLYSTPLNSYMAGTQFFLPPRS 332
           TTASGGSSAALPLLDPSSLYSTPLNS+MAGTQFFLPPRS
Sbjct: 301 TTASGGSSAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 323

[Close]

BLAST of Spg012149 vs. TAIR 10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 300.1 bits (767), Expect = 2.3e-81
Identity = 192/389 (49.36%), Postives = 240/389 (61.70%), Query Frame = 0


Query: 1   MSAFFTL--GGGGGGRGSEDQEDQQHNTNRPNEIVHPDNLFWYK---------------- 60
           M+ FF+L  GGGGGG G  +QED + NTN P  +   +   WY+                
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPV--SEAWLWYRNPNVNANANTNVNANA 60

Query: 61  --------GNVELWQQQQQQHQQEQALFQSRSHHTN-NPYSSP--LGAAPR--------- 120
                   G +ELW    Q H Q++ +FQ + H    + YSS   LG  P          
Sbjct: 61  PSSSNAALGTLELW----QNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISG 120

Query: 121 RSSDESSSRSGNFMMI---SSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFACQTH 180
            +S   + R+   MMI    SG G GG+SCQDCGNQAKKDCSHMRCRTCCKSRGF C TH
Sbjct: 121 ETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTH 180

Query: 181 VKSTWVPAAKRRERQEKLAALQTHHQLQLHGDTNNPKRHRDYNPTSSSSLACTLIPTNNN 240
           V+STWVPAAKRRERQ++LA +Q   Q QL    + PKRHR+  P +SSSL CT IP++  
Sbjct: 181 VRSTWVPAAKRRERQQQLATVQP--QTQLPRGESVPKRHRENLPATSSSLVCTRIPSH-- 240

Query: 241 NNNNASGLEIGNFPAELNSPAVFRCVRVSSADDSDDQYAYQTAVNIGGHVFKGILYDQGP 300
                SGLE+GNFPAE++S AVFRCVRVSS +D ++++AYQTAV+IGGH+FKGILYD GP
Sbjct: 241 -----SGLEVGNFPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGP 300

Query: 301 EN------NYIPAGETSSGGGGSSSGVQPLNFI-AGAADATTAS------GG----SSAA 332
            +      N + AGE+SSGGGG+    Q LN I AG+    TAS      GG    S+AA
Sbjct: 301 GSSGGGGYNVVAAGESSSGGGGA----QQLNLITAGSVTVATASSSTPNLGGIGSSSAAA 360

[Close]

BLAST of Spg012149 vs. TAIR 10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 265.8 bits (678), Expect = 4.7e-71
Identity = 178/366 (48.63%), Postives = 219/366 (59.84%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQHNTNRPNEIVHPDNLFW----------------YKGN 60
           M+ FF+LG GGGG      ++ + NTN P+     ++  W                YKG 
Sbjct: 1   MAGFFSLGHGGGG---NTPDNHRTNTNNPSS-SGTESWLWCRNPNSNADGGEAGPSYKGT 60

Query: 61  VELWQ---------QQQQQHQQEQALFQSRSHHTNNPYSSPLGAAP-RRSSDESSSRSGN 120
           +ELWQ         QQQQQ QQ   L+ S         ++ LG  P  RS  E+S   G 
Sbjct: 61  LELWQHPNNQEIIFQQQQQQQQRLDLYTS---------AAGLGVGPSNRSLIETS--GGA 120

Query: 121 FMMISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQ 180
            MM+ SGSG GG SCQDCGNQ+KKDCSHMRCRTCCKSRG  C THVKSTWVPAAKRRERQ
Sbjct: 121 LMMMRSGSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQ 180

Query: 181 EKLAALQTHHQLQLHGDTNNPKRHRDYNPTSSSSLACTLIPTNNNNNNNASGLEIGNFPA 240
           ++L+  Q   QL      + PKR R+  P  S+S+A T IP     +NN SGLE+GNFP 
Sbjct: 181 QQLSTGQQPQQL----GGSVPKRQRERIPARSTSMAYTRIP-----SNNTSGLEVGNFPP 240

Query: 241 ELNSPAVFRCVRVSSADDSDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPAGETSSGGG 300
           E++S AVFRCVRVSS DD +++YAY+TAV+IGGHVFKG+LYDQGP        E SS GG
Sbjct: 241 EVSSSAVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQGP-------AERSSSGG 300

Query: 301 GSSSGVQPLNFIAGAADATTASGG--------SSAALPLLDPSSL-YSTPLNSYMAGTQF 332
           GS    QPLN I     A+++S           S +   +DP+SL Y TP+N++M GT F
Sbjct: 301 GS----QPLNLITAGPSASSSSPNVSCNNGVVGSTSDHYIDPASLNYPTPINTFMTGTHF 331

[Close]

BLAST of Spg012149 vs. TAIR 10
Match: AT1G75520.1 (SHI-related sequence 5 )

HSP 1 Score: 229.2 bits (583), Expect = 4.9e-60
Identity = 167/372 (44.89%), Postives = 211/372 (56.72%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQ-----HNTNRPNEI-VHPDNLFWYKGNVELWQQ---Q 60
           M+ FF LGG      +  Q+  Q     H+ ++ N + ++ D ++      E+W     Q
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKGFEIWPPQYFQ 60

Query: 61  QQQHQQEQALFQSRSHHTNNPYSSPLGAAPRRSSDESS---SRSGNFMMISSGSGG---- 120
           QQ+HQQ+Q   Q + H +        G  P  SS  ++   SRS  F ++S    G    
Sbjct: 61  QQEHQQQQ---QQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTV 120

Query: 121 ---GGISCQDCGNQAKKDCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQEKLAALQ 180
              GG++CQDCGNQAKKDC HMRCRTCCKSRGF CQTHVKSTWVPAAKRRER  +LA+LQ
Sbjct: 121 TRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQ 180

Query: 181 THHQLQLHGDTNNPKRHR-----------DYNPTSSSSLACTLIPTNNNNNNNASGLEIG 240
            HH      +T N KR R           D++    S+LA T +   N+N    SGLE+ 
Sbjct: 181 -HHSASSR-ETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSN----SGLEVS 240

Query: 241 -NFPAELNSPAVFRCVRVSS-ADDSDDQ-YAYQTAVNIGGHVFKGILYDQGPENNYIPAG 300
            + P E+NSPA+FRCVRVSS  +D DDQ YAYQTAVNIGGH+FKGILYDQGPE+      
Sbjct: 241 QHLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEH------ 300

Query: 301 ETSSGGGGSSSGVQPLNFIAGAADAT--------TASGGSSAALPLLDPSSLYSTPLNSY 332
                          LN +A  A  T        T +G ++  L +LDPSSLY   LNS+
Sbjct: 301 ----------QDNHHLNLLASTATTTNVEETATKTVTGNNNNGL-MLDPSSLYPAQLNSF 346

[Close]

BLAST of Spg012149 vs. TAIR 10
Match: AT1G19790.1 (SHI-related sequence 7 )

HSP 1 Score: 205.3 bits (521), Expect = 7.6e-53
Identity = 153/362 (42.27%), Postives = 209/362 (57.73%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQHNTNRPNE--IVHPDNLFWYKGNVELWQQQQQQHQQE 60
           M+  F LGG    +    QE + HN ++ N    ++ D ++      E++  Q  Q QQ+
Sbjct: 1   MAGLFYLGGRDHNKQDHHQE-KDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQYFQQQQQ 60

Query: 61  QALFQSRSHHTNNPYSSPLGAAP---RRSSDESSSRSGNFMMIS------SGSGG----- 120
               Q+ +    N YS   G  P     +++ S++RS  F ++S      S +GG     
Sbjct: 61  ----QNHAAAPTNLYS--FGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTR 120

Query: 121 -GGISCQDCGNQAKKDCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQEKLAALQTH 180
            G ++CQDCGNQAKKDC HMRCRTCCKSRGF CQTHVKSTWV AAKRRERQ +LA L   
Sbjct: 121 QGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAK 180

Query: 181 HQLQLH----GDTNNPKRHRDYNPT--SSSSLACTLIPTNNNNNNNASGLEIGNFPAELN 240
                +    GD ++  +  + N +    S+LACT +      N ++SGLE  + P E++
Sbjct: 181 RIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVV-----NASSSGLETSHLPPEIS 240

Query: 241 SPAVFRCVRVSSADDSDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPAGETSSGGGGSS 300
           SPAVFRC+RVSS DD D++YAYQTAV+IGGHVFKGILYDQGP +++      SS   G +
Sbjct: 241 SPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDH---HRYSSSLNGET 300

Query: 301 SGVQPLNFI-----AGAADATTASGGSSAALPLLDPSSLY---STPLNSYMA-GTQFFLP 331
           S    LN +     A   +A TA   ++ +   +DPSSLY   +TP N+++A GT FF  
Sbjct: 301 SHQHHLNLMDSTPSAATTNAVTAVNTNNGS---IDPSSLYTAVATPFNAFVAGGTPFFAS 344

[Close]

BLAST of Spg012149 vs. TAIR 10
Match: AT1G19790.2 (SHI-related sequence 7 )

HSP 1 Score: 205.3 bits (521), Expect = 7.6e-53
Identity = 153/362 (42.27%), Postives = 209/362 (57.73%), Query Frame = 0


Query: 1   MSAFFTLGGGGGGRGSEDQEDQQHNTNRPNE--IVHPDNLFWYKGNVELWQQQQQQHQQE 60
           M+  F LGG    +    QE + HN ++ N    ++ D ++      E++  Q  Q QQ+
Sbjct: 1   MAGLFYLGGRDHNKQDHHQE-KDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQYFQQQQQ 60

Query: 61  QALFQSRSHHTNNPYSSPLGAAP---RRSSDESSSRSGNFMMIS------SGSGG----- 120
               Q+ +    N YS   G  P     +++ S++RS  F ++S      S +GG     
Sbjct: 61  ----QNHAAAPTNLYS--FGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTR 120

Query: 121 -GGISCQDCGNQAKKDCSHMRCRTCCKSRGFACQTHVKSTWVPAAKRRERQEKLAALQTH 180
            G ++CQDCGNQAKKDC HMRCRTCCKSRGF CQTHVKSTWV AAKRRERQ +LA L   
Sbjct: 121 QGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAK 180

Query: 181 HQLQLH----GDTNNPKRHRDYNPT--SSSSLACTLIPTNNNNNNNASGLEIGNFPAELN 240
                +    GD ++  +  + N +    S+LACT +      N ++SGLE  + P E++
Sbjct: 181 RIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVV-----NASSSGLETSHLPPEIS 240

Query: 241 SPAVFRCVRVSSADDSDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPAGETSSGGGGSS 300
           SPAVFRC+RVSS DD D++YAYQTAV+IGGHVFKGILYDQGP +++      SS   G +
Sbjct: 241 SPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDH---HRYSSSLNGET 300

Query: 301 SGVQPLNFI-----AGAADATTASGGSSAALPLLDPSSLY---STPLNSYMA-GTQFFLP 331
           S    LN +     A   +A TA   ++ +   +DPSSLY   +TP N+++A GT FF  
Sbjct: 301 SHQHHLNLMDSTPSAATTNAVTAVNTNNGS---IDPSSLYTAVATPFNAFVAGGTPFFAS 344

The following BLAST results are available for this feature:

BLAST of Spg012149 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149998.1	8.8e-144	81.56	protein SHI RELATED SEQUENCE 1 [Cucumis sativus] >KGN48885.1 hypothetical protei...	[more]
XP_008440782.1	6.3e-142	81.10	PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis melo] >KAA0025701.1 protein S...	[more]
XP_038881348.1	1.1e-138	82.42	protein SHI RELATED SEQUENCE 1-like [Benincasa hispida]	[more]
KAG6603931.1	1.6e-137	79.18	Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022979003.1	2.7e-137	80.18	protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022979004.1 protein S...	[more]

BLAST of Spg012149 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD40	3.2e-80	49.36	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
Q9XGX0	6.7e-70	48.63	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]
K4B6C9	2.8e-68	48.10	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]
Q9LQZ5	6.9e-59	44.89	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1	[more]
Q9FXH7	1.1e-51	42.27	Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1	[more]

BLAST of Spg012149 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGL4	4.2e-144	81.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504650 PE=3 SV=1	[more]
A0A5A7SN81	3.0e-142	81.10	Protein SHI RELATED SEQUENCE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B2J6	3.0e-142	81.10	protein SHI RELATED SEQUENCE 1 OS=Cucumis melo OX=3656 GN=LOC103485098 PE=3 SV=1	[more]
A0A6J1IUW1	1.3e-137	80.18	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478781 ...	[more]
A0A6J1GE84	5.0e-137	79.35	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145315...	[more]

BLAST of Spg012149 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51060.1	2.3e-81	49.36	Lateral root primordium (LRP) protein-related	[more]
AT5G66350.1	4.7e-71	48.63	Lateral root primordium (LRP) protein-related	[more]
AT1G75520.1	4.9e-60	44.89	SHI-related sequence 5	[more]
AT1G19790.1	7.6e-53	42.27	SHI-related sequence 7	[more]
AT1G19790.2	7.6e-53	42.27	SHI-related sequence 7	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05142	DUF702	coord: 106..260 e-value: 2.9E-66 score: 222.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	PANTHER	PTHR31604:SF4	PROTEIN SHORT INTERNODES	coord: 1..327
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 212..259 e-value: 2.1E-27 score: 92.8
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 108..150 e-value: 4.3E-27 score: 91.8
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 1..327

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg012149.1	Spg012149.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding