
Spg012144 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGATTCCGCCGCACAAAAAACCTATCCCCCGCCGTCGCCATCACCCTCAAATCTCCGCCGCCGAAACGGCACCGTTTCCCCTCCTCCACCGCCCTCGCCGATGGACTTGAGGCTCCTCTCCTCCAAGTCCTCTTCTCTATCCTACACCTCTCTCAAGGACATCCTCCCCTCCCCCGCCGCCGTCAACTCTCCCTCTGCCGCCTCCGCCGCTAACTCCGGCTACGAAATCTCGATCCGTAACCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCGACCTATGTCCGCTTCTTCCTACTCCGCCGGCCCCAATTTTTTCCACCGTTTCTGGCTCCGATTCTCTGCCGAAAATCCGATCTCCGGTTGTCTCGGATTCATCAGAGGTAGTATCATTCCGGCCGTAGTCCGAGTCATTCGGTTCTGCATTTGCTTGTGA ATGGCCGATTCCGCCGCACAAAAAACCTATCCCCCGCCGTCGCCATCACCCTCAAATCTCCGCCGCCGAAACGGCACCGTTTCCCCTCCTCCACCGCCCTCGCCGATGGACTTGAGGCTCCTCTCCTCCAAGTCCTCTTCTCTATCCTACACCTCTCTCAAGGACATCCTCCCCTCCCCCGCCGCCGTCAACTCTCCCTCTGCCGCCTCCGCCGCTAACTCCGGCTACGAAATCTCGATCCGTAACCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCGACCTATGTCCGCTTCTTCCTACTCCGCCGGCCCCAATTTTTTCCACCGTTTCTGGCTCCGATTCTCTGCCGAAAATCCGATCTCCGGTTGTCTCGGATTCATCAGAGGTAGTATCATTCCGGCCGTAGTCCGAGTCATTCGGTTCTGCATTTGCTTGTGA ATGGCCGATTCCGCCGCACAAAAAACCTATCCCCCGCCGTCGCCATCACCCTCAAATCTCCGCCGCCGAAACGGCACCGTTTCCCCTCCTCCACCGCCCTCGCCGATGGACTTGAGGCTCCTCTCCTCCAAGTCCTCTTCTCTATCCTACACCTCTCTCAAGGACATCCTCCCCTCCCCCGCCGCCGTCAACTCTCCCTCTGCCGCCTCCGCCGCTAACTCCGGCTACGAAATCTCGATCCGTAACCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCGACCTATGTCCGCTTCTTCCTACTCCGCCGGCCCCAATTTTTTCCACCGTTTCTGGCTCCGATTCTCTGCCGAAAATCCGATCTCCGGTTGTCTCGGATTCATCAGAGGTAGTATCATTCCGGCCGTAGTCCGAGTCATTCGGTTCTGCATTTGCTTGTGA MADSAAQKTYPPPSPSPSNLRRRNGTVSPPPPPSPMDLRLLSSKSSSLSYTSLKDILPSPAAVNSPSAASAANSGYEISIRNRLVKQAAWAYLRPMSASSYSAGPNFFHRFWLRFSAENPISGCLGFIRGSIIPAVVRVIRFCICL Homology
BLAST of Spg012144 vs. NCBI nr
Match: XP_038883302.1 (uncharacterized protein LOC120074291 [Benincasa hispida]) HSP 1 Score: 225.7 bits (574), Expect = 2.6e-55 Identity = 127/161 (78.88%), Postives = 134/161 (83.23%), Query Frame = 0
BLAST of Spg012144 vs. NCBI nr
Match: XP_022979075.1 (uncharacterized protein LOC111478820 [Cucurbita maxima]) HSP 1 Score: 214.9 bits (546), Expect = 4.5e-52 Identity = 123/160 (76.88%), Postives = 131/160 (81.88%), Query Frame = 0
BLAST of Spg012144 vs. NCBI nr
Match: XP_023544532.1 (uncharacterized protein LOC111804081 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 212.2 bits (539), Expect = 2.9e-51 Identity = 123/162 (75.93%), Postives = 130/162 (80.25%), Query Frame = 0
BLAST of Spg012144 vs. NCBI nr
Match: XP_022926106.1 (uncharacterized protein LOC111433319 [Cucurbita moschata] >KAG6604323.1 hypothetical protein SDJN03_04932, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034475.1 hypothetical protein SDJN02_04204, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 210.7 bits (535), Expect = 8.6e-51 Identity = 122/160 (76.25%), Postives = 129/160 (80.62%), Query Frame = 0
BLAST of Spg012144 vs. NCBI nr
Match: XP_022132713.1 (uncharacterized protein LOC111005510 [Momordica charantia]) HSP 1 Score: 203.4 bits (516), Expect = 1.4e-48 Identity = 114/150 (76.00%), Postives = 121/150 (80.67%), Query Frame = 0
BLAST of Spg012144 vs. ExPASy TrEMBL
Match: A0A6J1IS66 (uncharacterized protein LOC111478820 OS=Cucurbita maxima OX=3661 GN=LOC111478820 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.2e-52 Identity = 123/160 (76.88%), Postives = 131/160 (81.88%), Query Frame = 0
BLAST of Spg012144 vs. ExPASy TrEMBL
Match: A0A6J1EDY2 (uncharacterized protein LOC111433319 OS=Cucurbita moschata OX=3662 GN=LOC111433319 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 4.1e-51 Identity = 122/160 (76.25%), Postives = 129/160 (80.62%), Query Frame = 0
BLAST of Spg012144 vs. ExPASy TrEMBL
Match: A0A6J1BX34 (uncharacterized protein LOC111005510 OS=Momordica charantia OX=3673 GN=LOC111005510 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 6.6e-49 Identity = 114/150 (76.00%), Postives = 121/150 (80.67%), Query Frame = 0
BLAST of Spg012144 vs. ExPASy TrEMBL
Match: A0A6J1HF81 (uncharacterized protein LOC111463426 OS=Cucurbita moschata OX=3662 GN=LOC111463426 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.9e-48 Identity = 119/159 (74.84%), Postives = 127/159 (79.87%), Query Frame = 0
BLAST of Spg012144 vs. ExPASy TrEMBL
Match: A0A5A7SL81 (Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00720 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.6e-47 Identity = 114/156 (73.08%), Postives = 121/156 (77.56%), Query Frame = 0
BLAST of Spg012144 vs. TAIR 10
Match: AT5G06280.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 6.4e-12 Identity = 56/130 (43.08%), Postives = 76/130 (58.46%), Query Frame = 0
BLAST of Spg012144 vs. TAIR 10
Match: AT5G06280.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 6.4e-12 Identity = 56/130 (43.08%), Postives = 76/130 (58.46%), Query Frame = 0
BLAST of Spg012144 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.8 bits (151), Expect = 2.7e-10 Identity = 50/101 (49.50%), Postives = 64/101 (63.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|