Spg012128 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg012128
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein FAR1-RELATED SEQUENCE 4-like
Location	scaffold1: 5626003 .. 5630404 (+)
RNA-Seq Expression	Spg012128
Synteny	Spg012128

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCGTGTGTGGGTTTGTTATGGTGCCCTGTGGAATGAGAAGGAAAATGAATATGAGGGTGAAGAGTTGACGGGTTTCGACATCGACATTGGTACTGCATACAGTGACTTCTTAAGTCGATTATATAGATTAACCAGTATAAATTCAGAGGAATTTGACCTTAGAATAAGATGTGTAGTCCAATTGATGTCTAGGGCCCCTGCGTTTGTTATTAGGAACGATGAAGGCCTTAACACCTTTTTGACGTGGAATAAGGTCTCTGATGTACCCATATACATATCCACAATCCCAAAGTGTCATAGTAACCAAGACTCACGACCATTTCACATCCCATGCGTCATGCCAAATAAGGTGGAGCCGAATTTATCATCAACATCAGTCCCAAACAATATACTATCGACATCTACATCCTTCCCATGCGATGAATCCAAAAATATTCCTTCGAATAACTTGGGGGATGATGAAGACTATGGTAGTGAACTTTATGGTGGCCAAGATTGGGGGGACTACAGAGATTATGAGGAGTACGCAGATGATGAGGACATGGACACAGAGGTTGATGTAGCTGTGGGTGACGATGAGGAAGAGATTCACGTACAGTACAATGAGGATCCTTCTGCGCCTGAACAAGTGGCGACATGCTCTTCCGTTCCGAGTACTTCATCCAAGGCAATCATCATGACAACTCAGTCTTCCTCTTCTGAAGATGTAGAAGTTGGAGAAGTATTCATGTGTAAGAGAGACTTGTACATGAGGATGTCTGTGATTGCAATGAGAAGGAACTTCCAGTTTAGGGTTAAAAAGTCAAAGAATAACATATGGGTAGCTGAGTGTGTAATTGAAGAATGCAAATGGAGGGTTCGAGCTATGACTGTTACTAAGGGGTGTGAAATATTTAAGATCACGAAGTACTGTAATATCCACACCTGTGTACGTGAAATGTTAACCCATGATCATAGGCAAGCGAAGAGTTGGGTTATTGGAAATTTGATCAAGTCGAGGTTCCAAGACGTCGGTCGTACTTATAGGCCAATGGATATTGTGAACGATATTAGACAAGATTTTGGTGGGAAGCTCCTTATTGCGACCGGTGTAGATGGTAACAACCACTATATCCTGTAGGGTGGGCCTTGGCTGGGGAGAAACTGATCAGTCATGGACGTACTTTTTTCGACAGATGGAACGTGCAGTTGGACAAGTTCCTAGTCTGGTCATCGTGTCTGACAGACATGCCAGCATTGGTAAGGCAGTCAAAACTGTATTTCCTAATGCATTTCACTGCGTGTGTATCCGACACTTAGGGGAGAAACTTGAAGACGCATTTCAAGACCGGGAACTTTATGAAACTATTTGACGGAGCTGCAAGGGCATTTCGCGTGGTTGAATTCAATGAGTATTGGCAGCAACTCCCAGAAAATGTCAGGACATACCTACAAGGGGTCGGAGTTGAGAGGTGGGCTCGAGCATACCAGTGTGGTCGTCGGTATAACCAAATGACCACCATGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAAACGAATTGTATACTTGTTTCAATAAAGTGTTATTGAGTTTCTACAATAAAGTGTTATTGTTAAATATTGCACAATTTGACCCAAATCCAATAAACTAAGATCCAAGGTTGTTTACATGTGACTTGAACTGGTATGTGGGAACATACAGGGATCAGTGTTCAAGTAACAACCTAAAAGGTCTATAGTACAGGGATAAGACTGGGTACCTTATCCTGGTAACACTATGTGATACGGCCCGCTCTGTATTCGATACAGACGTATTGATCCAAGGCGTCCATGTAGGAGACATGCGAGCGGGGGTATCCTATGCAGTGAGTTTGCATAAGACCGGACCACGAAATAGTAAACCACTAGATGTAACACCGTTAACTAGTTAGGTTACTGTTTCAATACGATGACCTAGGTAACTCAGTCTTAATCCTGAGTGTGTCATGAACTCCTTCTCATGAGGGATTGTCCTTTGATTAGCATGTGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACGGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCACATCTAGGAGAAGTAGATGAGTGTTCCCTTAAGTGGTGACTCCGGGACTTGAACAAAGGGATCCTGCCCTCTCACTGGCCCGAGAGGGACTTTCTGTTTAATGGTTGGACCATAAACAGGTTGTTCATTATAGGAGCACTGGTACTTAAGGAGACAGATGTAACATAAGGGTAAAACGGTAATTTGACCCAGCCGTGATTACGAACACTCGTGGAGGATTGACTTACCGGCATAGGTCTACATCCATGGACACAGAAATGTTCTACAGTGAGAAGAGTTCAGTTGTGGGTCTTTAGTGGAATGACCCACAGTTAATGAATATTGGTTAACCTGATTAATGAGTTTAATCTATTAACCTCATATCATTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCCCCTGCTAGCTCGTAAAGAGTAATTAGGAACAAATATATCTTGAGAGAATTTGAATAGTTCAAATTCATATTGGGAATTAAGTTAATTGTACGAGATACAAATTAATATAATGTATAGTGATGCATTAAAATATAAAGTTTAATTTTAGATTAAACTTTATTATATTGAGAGATTGATATATTTGAAAGAGTTCAAATATATGTCTAATTAAATATATGGTATTTAATTAGAAGATAAATTAATTAATTATGAATTAATTAATTATTCAATTTAGTTTAAATTAAATGAGATTTAATTAAACTATAGTCTATGAGAGAAATAAATATTTGAAGAAGTTCAAATATTAATATGAATTTGATTCATATTAAATTTATAGGATATAAGAGAATTTGAAGGAGTTCAAATTTTAATATGAATTTGATTCATATTATAGAATTAATTAATTGAAGGTCTCAAATTAAATATATGATATTTAATTGGGTAATTAATTAATTAACTAATAGAATGTCTGAAATTAAATATATGATATTTAATTGGTGATTAATTAATTAAAGAATTAATTAATTGGAAATTAATCAATTATGAAAATGATTAATCACTTATGGAAGTAATTAATCATTTATGGAAATGATTTAATCACTTATGGAAGTGATCAATCATTTATGGAAAAGATTAATCAATTATGGAATTGGTTGGTTATGGAATTGATTAATTATGGAAAAGATTAAATCAATTATGGAAATAATTGATTTTAAATGAATATTTTATTCATGGCCTTTCTCCTATAAATAGAACACTAAACCTAGGGTTTAAGTACAACAACATAATGCCACAAGAATGCACTCTTGCATTCTCTCTAGCCTCCCTCTCATATTCTCTCAACTCAGGAACTTTAGGGAGAATTTTCTCTCTAGAGTTTTTCCCATTCAAGATTAGGTAGTCCCACAACTACGTTCCTAATCTCAGAGTTATAGCGGGGAAGATCAAATGGTGGTGTTCTTCGTTGTTGCAGAACAATCAAGAATCATCCATTGAAGTATTCAGAGTCGTCAACGGAGGTTTGCTTCTCTTTTCTTTATTATAGATTTAGATCTAAATTTTGTATGCTTAGCCTTAAGTTTCTATAGAATTTGTTCTATGTTTTAACCAATGCAATAGTATTTTTGGATAAACAAAATTAACTACGAATCGGTCCCAATTACGCTTCCGCTTTAACGGAATTGGGGAATTCCAAATCCTTTCACACCAATCTTGCGGAGTGCACTAACTCAGTGTTGAAAGAAGCACGAGAGCTCCCAATCACCGCATTCATGAATCATATCAGAGGGTGGCTCCAAGCAAAATACTACAAACGCAGGAATAAGCACTCCAGTAACCCGAGTCAGTGGTCGAAGTTTGCAATGGAAGTTTTGGAAACAGCAGAGGAGAAGTCACGGAGGCACGTTGTCAAACCTATTGCTCGATATGAGTTTGATGTCGAGGACGGACATTTGGGTGGACGTGTCAACCTTCACGCTAGAACATGCACATGTCGTGAATTTGAGTATTACGAACTTCCATGCTCCCATGCGATCGCTGCATGCACTTATCGACATATAGACCATCATACACTTTGTTCCAGAGTCTACCATGTGGACTCTTTGATAGATGCATATGCACAACCCATACAACCTCTTGGGCATGAGTCGGAGTGGAAGAGGTCACCTCAATTTGTCGATGTGGAAGTCTTGCCTCCTCGAAGAGTGCCTAGAGTTGGTCGTCGTCAGACGTTGAGAATACCGTCTACGGGAGAAGTGCGGCATGTCCGCAAATGCAGCCGGTGCGGGAATAGGGGGCATAACAGAAAAACATGCAGACAACCATTGAACAATTCTTGA

mRNA sequence

ATGCCTCGTGTGTGGGTTTGTTATGGTGCCCTGTGGAATGAGAAGGAAAATGAATATGAGGGTGAAGAGTTGACGGGTTTCGACATCGACATTGGTACTGCATACAGTGACTTCTTAAGTCGATTATATAGATTAACCAGTATAAATTCAGAGGAATTTGACCTTAGAATAAGATGTGTAGTCCAATTGATGTCTAGGGCCCCTGCGTTTGTTATTAGGAACGATGAAGGCCTTAACACCTTTTTGACGTGGAATAAGGTCTCTGATGTACCCATATACATATCCACAATCCCAAAGTGTCATAGTAACCAAGACTCACGACCATTTCACATCCCATGCGTCATGCCAAATAAGGTGGAGCCGAATTTATCATCAACATCAGTCCCAAACAATATACTATCGACATCTACATCCTTCCCATGCGATGAATCCAAAAATATTCCTTCGAATAACTTGGGGGATGATGAAGACTATGGTAGTGAACTTTATGGTGGCCAAGATTGGGGGGACTACAGAGATTATGAGGAGTACGCAGATGATGAGGACATGGACACAGAGGTTGATGTAGCTGTGGGTGACGATGAGGAAGAGATTCACGTACAGTACAATGAGGATCCTTCTGCGCCTGAACAATACAGGGATAAGACTGGGTACCTTATCCTGGTAACACTATGTGATACGGCCCGCTCTGTATTCGATACAGACGTATTGATCCAAGGCGTCCATGTAGGAGACATGCGAGCGGGGGTATCCTATGCAGTGACATGTGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACGGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCACATCTAGGAGAAGTAGATGAGTGTCCATTAGGTCCCCCTGCTAGCTCAGTTATAGCGGGGAAGATCAAATGGTGGTGTTCTTCGTTGTTGCAGAACAATCAAGAATCATCCATTGAAGTATTCAGAGTCGTCAACGGAGTGTTGAAAGAAGCACGAGAGCTCCCAATCACCGCATTCATGAATCATATCAGAGGGTGGCTCCAAGCAAAATACTACAAACGCAGGAATAAGCACTCCAGTAACCCGAGTCAGTGGTCGAAGTTTGCAATGGAAGTTTTGGAAACAGCAGAGGAGAAGTCACGGAGGCACGTTGTCAAACCTATTGCTCGATATGAGTTTGATGTCGAGGACGGACATTTGGGTGGACGTGTCAACCTTCACGCTAGAACATGCACATGTCGTGAATTTGAGTATTACGAACTTCCATGCTCCCATGCGATCGCTGCATGCACTTATCGACATATAGACCATCATACACTTTGTTCCAGAGTCTACCATGTGGACTCTTTGATAGATGCATATGCACAACCCATACAACCTCTTGGGCATGAGTCGGAGTGGAAGAGGTCACCTCAATTTGTCGATGTGGAAGTCTTGCCTCCTCGAAGAGTGCCTAGAGTTGGTCGTCGTCAGACGTTGAGAATACCGTCTACGGGAGAAGTGCGGCATGTCCGCAAATGCAGCCGGTGCGGGAATAGGGGGCATAACAGAAAAACATGCAGACAACCATTGAACAATTCTTGA

Coding sequence (CDS)

ATGCCTCGTGTGTGGGTTTGTTATGGTGCCCTGTGGAATGAGAAGGAAAATGAATATGAGGGTGAAGAGTTGACGGGTTTCGACATCGACATTGGTACTGCATACAGTGACTTCTTAAGTCGATTATATAGATTAACCAGTATAAATTCAGAGGAATTTGACCTTAGAATAAGATGTGTAGTCCAATTGATGTCTAGGGCCCCTGCGTTTGTTATTAGGAACGATGAAGGCCTTAACACCTTTTTGACGTGGAATAAGGTCTCTGATGTACCCATATACATATCCACAATCCCAAAGTGTCATAGTAACCAAGACTCACGACCATTTCACATCCCATGCGTCATGCCAAATAAGGTGGAGCCGAATTTATCATCAACATCAGTCCCAAACAATATACTATCGACATCTACATCCTTCCCATGCGATGAATCCAAAAATATTCCTTCGAATAACTTGGGGGATGATGAAGACTATGGTAGTGAACTTTATGGTGGCCAAGATTGGGGGGACTACAGAGATTATGAGGAGTACGCAGATGATGAGGACATGGACACAGAGGTTGATGTAGCTGTGGGTGACGATGAGGAAGAGATTCACGTACAGTACAATGAGGATCCTTCTGCGCCTGAACAATACAGGGATAAGACTGGGTACCTTATCCTGGTAACACTATGTGATACGGCCCGCTCTGTATTCGATACAGACGTATTGATCCAAGGCGTCCATGTAGGAGACATGCGAGCGGGGGTATCCTATGCAGTGACATGTGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACGGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCACATCTAGGAGAAGTAGATGAGTGTCCATTAGGTCCCCCTGCTAGCTCAGTTATAGCGGGGAAGATCAAATGGTGGTGTTCTTCGTTGTTGCAGAACAATCAAGAATCATCCATTGAAGTATTCAGAGTCGTCAACGGAGTGTTGAAAGAAGCACGAGAGCTCCCAATCACCGCATTCATGAATCATATCAGAGGGTGGCTCCAAGCAAAATACTACAAACGCAGGAATAAGCACTCCAGTAACCCGAGTCAGTGGTCGAAGTTTGCAATGGAAGTTTTGGAAACAGCAGAGGAGAAGTCACGGAGGCACGTTGTCAAACCTATTGCTCGATATGAGTTTGATGTCGAGGACGGACATTTGGGTGGACGTGTCAACCTTCACGCTAGAACATGCACATGTCGTGAATTTGAGTATTACGAACTTCCATGCTCCCATGCGATCGCTGCATGCACTTATCGACATATAGACCATCATACACTTTGTTCCAGAGTCTACCATGTGGACTCTTTGATAGATGCATATGCACAACCCATACAACCTCTTGGGCATGAGTCGGAGTGGAAGAGGTCACCTCAATTTGTCGATGTGGAAGTCTTGCCTCCTCGAAGAGTGCCTAGAGTTGGTCGTCGTCAGACGTTGAGAATACCGTCTACGGGAGAAGTGCGGCATGTCCGCAAATGCAGCCGGTGCGGGAATAGGGGGCATAACAGAAAAACATGCAGACAACCATTGAACAATTCTTGA

Protein sequence

MPRVWVCYGALWNEKENEYEGEELTGFDIDIGTAYSDFLSRLYRLTSINSEEFDLRIRCVVQLMSRAPAFVIRNDEGLNTFLTWNKVSDVPIYISTIPKCHSNQDSRPFHIPCVMPNKVEPNLSSTSVPNNILSTSTSFPCDESKNIPSNNLGDDEDYGSELYGGQDWGDYRDYEEYADDEDMDTEVDVAVGDDEEEIHVQYNEDPSAPEQYRDKTGYLILVTLCDTARSVFDTDVLIQGVHVGDMRAGVSYAVTCVRVANTPTQYAFLFGDKTEWEAGDMTTQEGIHSFPHLGEVDECPLGPPASSVIAGKIKWWCSSLLQNNQESSIEVFRVVNGVLKEARELPITAFMNHIRGWLQAKYYKRRNKHSSNPSQWSKFAMEVLETAEEKSRRHVVKPIARYEFDVEDGHLGGRVNLHARTCTCREFEYYELPCSHAIAACTYRHIDHHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRSPQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVRHVRKCSRCGNRGHNRKTCRQPLNNS

Homology

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BLAST of Spg012128 vs. NCBI nr
Match: XP_022145141.1 (uncharacterized protein LOC111014656 [Momordica charantia])

HSP 1 Score: 229.6 bits (584), Expect = 6.6e-56
Identity = 110/202 (54.46%), Postives = 148/202 (73.27%), Query Frame = 0


Query: 335 VNGVLKEARELPITAFMNHIRGWLQAKYYKRRNKHSSNPSQWSKFAMEVLETAEEKSRRH 394
           VN + + AR+LP+TA ++HIRG LQ  +Y+RR   SS  S  S +A E++  A + +RRH
Sbjct: 9   VNALFRHARKLPVTALLDHIRGVLQRWFYERRTLASSRQSTLSDYAEEMIAEASDNARRH 68

Query: 395 VVKPIARYEFDVEDGHLGGRVNLHARTCTCREFEYYELPCSHAIAACTYRHIDHHTLCSR 454
           +V  I ++ F+V DG+L   V+L  +TCT REF+Y+++PCSHAIA  + R I+ +TLC  
Sbjct: 69  IVMNIDQFNFEVRDGNLNEDVDLQTQTCTYREFDYFKVPCSHAIAVASSRSINPYTLCDE 128

Query: 455 VYHVDSLIDAYAQPIQPLGHESEWKRSPQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVRH 514
            Y V+S + AYA+PI P+G  S WK SP FV+++V PP++V RVGRRQT+RIPSTGEVR 
Sbjct: 129 AYTVNSWMLAYAEPIFPVGSSSTWKSSPGFVNIDVQPPKKVVRVGRRQTVRIPSTGEVRP 188

Query: 515 VRKCSRCGNRGHNRKTCRQPLN 537
            RKCSRCG  GHNRKTCR+PLN
Sbjct: 189 PRKCSRCGTSGHNRKTCREPLN 210

[Close]

BLAST of Spg012128 vs. NCBI nr
Match: XP_022154963.1 (uncharacterized protein LOC111022107 [Momordica charantia])

HSP 1 Score: 223.4 bits (568), Expect = 4.7e-54
Identity = 107/202 (52.97%), Postives = 144/202 (71.29%), Query Frame = 0


Query: 335 VNGVLKEARELPITAFMNHIRGWLQAKYYKRRNKHSSNPSQWSKFAMEVLETAEEKSRRH 394
           VN + + AR+LP+T  ++HIRG LQ  +Y+RR   SS  S  S +A E++  A + +R H
Sbjct: 9   VNALFRHARKLPVTVLLDHIRGVLQRWFYERRTLASSRQSTLSDYAEEMIXEASDNARXH 68

Query: 395 VVKPIARYEFDVEDGHLGGRVNLHARTCTCREFEYYELPCSHAIAACTYRHIDHHTLCSR 454
           +V  I  + F+V DG+L G V+L ++TCTCREF+Y+++PCSHAIAA   R I+ +TLC  
Sbjct: 69  IVMNIDXFNFEVRDGNLNGDVDLQSQTCTCREFDYFKVPCSHAIAAANSRSINPYTLCDE 128

Query: 455 VYHVDSLIDAYAQPIQPLGHESEWKRSPQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVRH 514
            Y V+S +   A+PI P+G  S WK SP FV+++V PP++V RVGRRQT+RIP TGEVR 
Sbjct: 129 AYTVNSWMLGCAEPIFPVGSSSTWKSSPGFVNIDVQPPKKVVRVGRRQTVRIPYTGEVRP 188

Query: 515 VRKCSRCGNRGHNRKTCRQPLN 537
            RKCSRCG  GHN KTCR+PLN
Sbjct: 189 PRKCSRCGTSGHNCKTCREPLN 210

[Close]

BLAST of Spg012128 vs. NCBI nr
Match: XP_022159268.1 (uncharacterized protein LOC111025678 [Momordica charantia])

HSP 1 Score: 221.5 bits (563), Expect = 1.8e-53
Identity = 104/201 (51.74%), Postives = 142/201 (70.65%), Query Frame = 0


Query: 335 VNGVLKEARELPITAFMNHIRGWLQAKYYKRRNKHSSNPSQWSKFAMEVLETAEEKSRRH 394
           +N + +  R+LP+TA ++HIRG LQ  +Y RR   +S  +  S +A  +     + +RRH
Sbjct: 310 INALFRHTRKLPVTALLDHIRGKLQTWFYDRRTLAASRSTTLSDYAENMYAEYSDSARRH 369

Query: 395 VVKPIARYEFDVEDGHLGGRVNLHARTCTCREFEYYELPCSHAIAACTYRHIDHHTLCSR 454
           VV  I ++ F V DG+L G V+L+A  C+CREF+Y+++PCSHAIAA T R+I+ ++LC  
Sbjct: 370 VVDNIDQFHFQVRDGNLDGIVDLNAMMCSCREFDYFKIPCSHAIAAATMRNINPYSLCDE 429

Query: 455 VYHVDSLIDAYAQPIQPLGHESEWKRSPQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVRH 514
            Y  +S I AYA+PI P+GH S W  SP+FV++ V PP+ VPRVGRR+T+RIPSTGEVR 
Sbjct: 430 AYTTNSWILAYAEPIFPVGHISTWNSSPEFVNIPVEPPKTVPRVGRRKTVRIPSTGEVRQ 489

Query: 515 VRKCSRCGNRGHNRKTCRQPL 536
            RKC RCG  GHNRKTC +PL
Sbjct: 490 TRKCGRCGAWGHNRKTCSEPL 510

[Close]

BLAST of Spg012128 vs. NCBI nr
Match: XP_022153146.1 (uncharacterized protein LOC111020715 [Momordica charantia])

HSP 1 Score: 220.7 bits (561), Expect = 3.0e-53
Identity = 109/221 (49.32%), Postives = 143/221 (64.71%), Query Frame = 0


Query: 318 SSLLQNNQESSIEVFRVVNGVLKEARELPITAFMNHIRGWLQAKYYKRRNKHSSNPSQWS 377
           + +  NN ES       VN + + AR+LP+TA ++HIRG LQ  +Y RR   SS  +  S
Sbjct: 424 TQMTSNNAES-------VNALFRHARKLPVTALLDHIRGLLQTWFYDRRTLASSRSTTLS 483

Query: 378 KFAMEVLETAEEKSRRHVVKPIARYEFDVEDGHLGGRVNLHARTCTCREFEYYELPCSHA 437
            +A   L    + +RRHVV  I ++   V DG+L G V+ ++RTC CREF+Y+++PCSHA
Sbjct: 484 YYAENKLAEYSDNARRHVVVNIDQFHVQVRDGNLDGIVDFNSRTCNCREFDYFKIPCSHA 543

Query: 438 IAACTYRHIDHHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRSPQFVDVEVLPPRRVPR 497
           IA    R+I+ +TLC   Y  +S + AYA+PI P+GH S W  SP FVD  V  P  VPR
Sbjct: 544 IAEAMMRNINPYTLCDEAYTTNSWVMAYAEPIFPIGHVSTWNSSPDFVDTPVEAPYMVPR 603

Query: 498 VGRRQTLRIPSTGEVRHVRKCSRCGNRGHNRKTCRQPLNNS 539
           VGRR+T+RIPSTGEVR  RKC RCG  GHN KTC +PLN +
Sbjct: 604 VGRRRTVRIPSTGEVRQTRKCGRCGTSGHNHKTCNEPLNTA 637

[Close]

BLAST of Spg012128 vs. NCBI nr
Match: XP_022154610.1 (uncharacterized protein LOC111021833 [Momordica charantia])

HSP 1 Score: 218.8 bits (556), Expect = 1.2e-52
Identity = 107/226 (47.35%), Postives = 145/226 (64.16%), Query Frame = 0


Query: 311 GKIKW-WCSSLLQNNQESSIEVFRVVNGVLKEARELPITAFMNHIRGWLQAKYYKRRNKH 370
           GK +W  C        + +  +   VN   + AR+LP+TA ++HIRG L   +Y RR   
Sbjct: 96  GKERWARCFQTQLRYTQMTTNIAESVNAFFRHARKLPVTALLDHIRGKLHNWFYDRRTLA 155

Query: 371 SSNPSQWSKFAMEVLETAEEKSRRHVVKPIARYEFDVEDGHLGGRVNLHARTCTCREFEY 430
           +S  +  S +A  +     + +RRHVV  I ++ F V DG+  G V+L+A TC+CREF+Y
Sbjct: 156 ASRSTTLSDYAENMYAEYSDSARRHVVDNIDQFHFQVRDGNFDGIVDLNAMTCSCREFDY 215

Query: 431 YELPCSHAIAACTYRHIDHHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRSPQFVDVEV 490
           +++PCSH IAA   R+I+ ++LC   Y  +S I AYA+PI P+GH S W  SP+FV++ V
Sbjct: 216 FKIPCSHVIAAAMMRNINPYSLCDEAYTTNSWILAYAEPIFPVGHVSTWNSSPEFVNIPV 275

Query: 491 LPPRRVPRVGRRQTLRIPSTGEVRHVRKCSRCGNRGHNRKTCRQPL 536
            PP+ VPRVGRR T RIPSTGEVR  RKC RCG  GHNRKTC +PL
Sbjct: 276 EPPKTVPRVGRRNTTRIPSTGEVRQTRKCGRCGAWGHNRKTCSEPL 321

[Close]

BLAST of Spg012128 vs. ExPASy TrEMBL
Match: A0A6J1CVG8 (uncharacterized protein LOC111014656 OS=Momordica charantia OX=3673 GN=LOC111014656 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.2e-56
Identity = 110/202 (54.46%), Postives = 148/202 (73.27%), Query Frame = 0


Query: 335 VNGVLKEARELPITAFMNHIRGWLQAKYYKRRNKHSSNPSQWSKFAMEVLETAEEKSRRH 394
           VN + + AR+LP+TA ++HIRG LQ  +Y+RR   SS  S  S +A E++  A + +RRH
Sbjct: 9   VNALFRHARKLPVTALLDHIRGVLQRWFYERRTLASSRQSTLSDYAEEMIAEASDNARRH 68

Query: 395 VVKPIARYEFDVEDGHLGGRVNLHARTCTCREFEYYELPCSHAIAACTYRHIDHHTLCSR 454
           +V  I ++ F+V DG+L   V+L  +TCT REF+Y+++PCSHAIA  + R I+ +TLC  
Sbjct: 69  IVMNIDQFNFEVRDGNLNEDVDLQTQTCTYREFDYFKVPCSHAIAVASSRSINPYTLCDE 128

Query: 455 VYHVDSLIDAYAQPIQPLGHESEWKRSPQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVRH 514
            Y V+S + AYA+PI P+G  S WK SP FV+++V PP++V RVGRRQT+RIPSTGEVR 
Sbjct: 129 AYTVNSWMLAYAEPIFPVGSSSTWKSSPGFVNIDVQPPKKVVRVGRRQTVRIPSTGEVRP 188

Query: 515 VRKCSRCGNRGHNRKTCRQPLN 537
            RKCSRCG  GHNRKTCR+PLN
Sbjct: 189 PRKCSRCGTSGHNRKTCREPLN 210

[Close]

BLAST of Spg012128 vs. ExPASy TrEMBL
Match: A0A6J1DLQ2 (uncharacterized protein LOC111022107 OS=Momordica charantia OX=3673 GN=LOC111022107 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.3e-54
Identity = 107/202 (52.97%), Postives = 144/202 (71.29%), Query Frame = 0


Query: 335 VNGVLKEARELPITAFMNHIRGWLQAKYYKRRNKHSSNPSQWSKFAMEVLETAEEKSRRH 394
           VN + + AR+LP+T  ++HIRG LQ  +Y+RR   SS  S  S +A E++  A + +R H
Sbjct: 9   VNALFRHARKLPVTVLLDHIRGVLQRWFYERRTLASSRQSTLSDYAEEMIXEASDNARXH 68

Query: 395 VVKPIARYEFDVEDGHLGGRVNLHARTCTCREFEYYELPCSHAIAACTYRHIDHHTLCSR 454
           +V  I  + F+V DG+L G V+L ++TCTCREF+Y+++PCSHAIAA   R I+ +TLC  
Sbjct: 69  IVMNIDXFNFEVRDGNLNGDVDLQSQTCTCREFDYFKVPCSHAIAAANSRSINPYTLCDE 128

Query: 455 VYHVDSLIDAYAQPIQPLGHESEWKRSPQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVRH 514
            Y V+S +   A+PI P+G  S WK SP FV+++V PP++V RVGRRQT+RIP TGEVR 
Sbjct: 129 AYTVNSWMLGCAEPIFPVGSSSTWKSSPGFVNIDVQPPKKVVRVGRRQTVRIPYTGEVRP 188

Query: 515 VRKCSRCGNRGHNRKTCRQPLN 537
            RKCSRCG  GHN KTCR+PLN
Sbjct: 189 PRKCSRCGTSGHNCKTCREPLN 210

[Close]

BLAST of Spg012128 vs. ExPASy TrEMBL
Match: A0A6J1DYC4 (uncharacterized protein LOC111025678 OS=Momordica charantia OX=3673 GN=LOC111025678 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 8.6e-54
Identity = 104/201 (51.74%), Postives = 142/201 (70.65%), Query Frame = 0


Query: 335 VNGVLKEARELPITAFMNHIRGWLQAKYYKRRNKHSSNPSQWSKFAMEVLETAEEKSRRH 394
           +N + +  R+LP+TA ++HIRG LQ  +Y RR   +S  +  S +A  +     + +RRH
Sbjct: 310 INALFRHTRKLPVTALLDHIRGKLQTWFYDRRTLAASRSTTLSDYAENMYAEYSDSARRH 369

Query: 395 VVKPIARYEFDVEDGHLGGRVNLHARTCTCREFEYYELPCSHAIAACTYRHIDHHTLCSR 454
           VV  I ++ F V DG+L G V+L+A  C+CREF+Y+++PCSHAIAA T R+I+ ++LC  
Sbjct: 370 VVDNIDQFHFQVRDGNLDGIVDLNAMMCSCREFDYFKIPCSHAIAAATMRNINPYSLCDE 429

Query: 455 VYHVDSLIDAYAQPIQPLGHESEWKRSPQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVRH 514
            Y  +S I AYA+PI P+GH S W  SP+FV++ V PP+ VPRVGRR+T+RIPSTGEVR 
Sbjct: 430 AYTTNSWILAYAEPIFPVGHISTWNSSPEFVNIPVEPPKTVPRVGRRKTVRIPSTGEVRQ 489

Query: 515 VRKCSRCGNRGHNRKTCRQPL 536
            RKC RCG  GHNRKTC +PL
Sbjct: 490 TRKCGRCGAWGHNRKTCSEPL 510

[Close]

BLAST of Spg012128 vs. ExPASy TrEMBL
Match: A0A6J1DJT1 (uncharacterized protein LOC111020715 OS=Momordica charantia OX=3673 GN=LOC111020715 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.5e-53
Identity = 109/221 (49.32%), Postives = 143/221 (64.71%), Query Frame = 0


Query: 318 SSLLQNNQESSIEVFRVVNGVLKEARELPITAFMNHIRGWLQAKYYKRRNKHSSNPSQWS 377
           + +  NN ES       VN + + AR+LP+TA ++HIRG LQ  +Y RR   SS  +  S
Sbjct: 424 TQMTSNNAES-------VNALFRHARKLPVTALLDHIRGLLQTWFYDRRTLASSRSTTLS 483

Query: 378 KFAMEVLETAEEKSRRHVVKPIARYEFDVEDGHLGGRVNLHARTCTCREFEYYELPCSHA 437
            +A   L    + +RRHVV  I ++   V DG+L G V+ ++RTC CREF+Y+++PCSHA
Sbjct: 484 YYAENKLAEYSDNARRHVVVNIDQFHVQVRDGNLDGIVDFNSRTCNCREFDYFKIPCSHA 543

Query: 438 IAACTYRHIDHHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRSPQFVDVEVLPPRRVPR 497
           IA    R+I+ +TLC   Y  +S + AYA+PI P+GH S W  SP FVD  V  P  VPR
Sbjct: 544 IAEAMMRNINPYTLCDEAYTTNSWVMAYAEPIFPIGHVSTWNSSPDFVDTPVEAPYMVPR 603

Query: 498 VGRRQTLRIPSTGEVRHVRKCSRCGNRGHNRKTCRQPLNNS 539
           VGRR+T+RIPSTGEVR  RKC RCG  GHN KTC +PLN +
Sbjct: 604 VGRRRTVRIPSTGEVRQTRKCGRCGTSGHNHKTCNEPLNTA 637

[Close]

BLAST of Spg012128 vs. ExPASy TrEMBL
Match: A0A6J1DK35 (uncharacterized protein LOC111021833 OS=Momordica charantia OX=3673 GN=LOC111021833 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.6e-53
Identity = 107/226 (47.35%), Postives = 145/226 (64.16%), Query Frame = 0


Query: 311 GKIKW-WCSSLLQNNQESSIEVFRVVNGVLKEARELPITAFMNHIRGWLQAKYYKRRNKH 370
           GK +W  C        + +  +   VN   + AR+LP+TA ++HIRG L   +Y RR   
Sbjct: 96  GKERWARCFQTQLRYTQMTTNIAESVNAFFRHARKLPVTALLDHIRGKLHNWFYDRRTLA 155

Query: 371 SSNPSQWSKFAMEVLETAEEKSRRHVVKPIARYEFDVEDGHLGGRVNLHARTCTCREFEY 430
           +S  +  S +A  +     + +RRHVV  I ++ F V DG+  G V+L+A TC+CREF+Y
Sbjct: 156 ASRSTTLSDYAENMYAEYSDSARRHVVDNIDQFHFQVRDGNFDGIVDLNAMTCSCREFDY 215

Query: 431 YELPCSHAIAACTYRHIDHHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKRSPQFVDVEV 490
           +++PCSH IAA   R+I+ ++LC   Y  +S I AYA+PI P+GH S W  SP+FV++ V
Sbjct: 216 FKIPCSHVIAAAMMRNINPYSLCDEAYTTNSWILAYAEPIFPVGHVSTWNSSPEFVNIPV 275

Query: 491 LPPRRVPRVGRRQTLRIPSTGEVRHVRKCSRCGNRGHNRKTCRQPL 536
            PP+ VPRVGRR T RIPSTGEVR  RKC RCG  GHNRKTC +PL
Sbjct: 276 EPPKTVPRVGRRNTTRIPSTGEVRQTRKCGRCGAWGHNRKTCSEPL 321

[Close]

BLAST of Spg012128 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 48.5 bits (114), Expect = 1.9e-05
Identity = 29/100 (29.00%), Postives = 43/100 (43.00%), Query Frame = 0


Query: 381 MEVLETAEEKSRRHVVKPIARYEFDVEDGHLGGR--VNLHARTCTCREFEYYELPCSHAI 440
           M+ LE     S  +V+  + R  F V +        V L+  TCTCR+F+ Y+ PC HA+
Sbjct: 600 MDKLEEFMTDSIPYVITQLERDSFKVSESSEKEEWIVQLNVSTCTCRKFQSYKFPCLHAL 659

Query: 441 AACTYRHIDHHTLCSRVYHVDSLIDAYAQPIQPLGHESEW 479
           A      I+        Y V+     YA    P+   + W
Sbjct: 660 AVFEKLKINPLQYVDECYTVEQYCKTYAATFSPVPDVAAW 699

[Close]

BLAST of Spg012128 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase )

HSP 1 Score: 46.2 bits (108), Expect = 9.6e-05
Identity = 35/135 (25.93%), Postives = 53/135 (39.26%), Query Frame = 0


Query: 376 WSKFAMEVLETAEEKSRRHV--VKPIARYEFDV-------------EDGHLGGRVNLHAR 435
           +++  ME LE  E  S   V  + P+ R  + V              +    G V L+  
Sbjct: 598 YTEHVMEKLEEFETDSDTWVITITPLERDAYQVSMAPKKKTRLMGQSNDSTSGIVQLNDT 657

Query: 436 TCTCREFEYYELPCSHAIAACTYRHIDHHTLCSRVYHVDSLIDAYAQPIQPLGHESEWKR 493
           TCTC EF+  + PC HA+A C    I+        Y V+     Y+    P+   S W  
Sbjct: 658 TCTCGEFQKNKFPCLHALAVCDELKINPLQYVDDCYTVERYHKTYSAKFSPVPELSAWPE 717

The following BLAST results are available for this feature:

BLAST of Spg012128 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145141.1	6.6e-56	54.46	uncharacterized protein LOC111014656 [Momordica charantia]	[more]
XP_022154963.1	4.7e-54	52.97	uncharacterized protein LOC111022107 [Momordica charantia]	[more]
XP_022159268.1	1.8e-53	51.74	uncharacterized protein LOC111025678 [Momordica charantia]	[more]
XP_022153146.1	3.0e-53	49.32	uncharacterized protein LOC111020715 [Momordica charantia]	[more]
XP_022154610.1	1.2e-52	47.35	uncharacterized protein LOC111021833 [Momordica charantia]	[more]

BLAST of Spg012128 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg012128 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVG8	3.2e-56	54.46	uncharacterized protein LOC111014656 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1DLQ2	2.3e-54	52.97	uncharacterized protein LOC111022107 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DYC4	8.6e-54	51.74	uncharacterized protein LOC111025678 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DJT1	1.5e-53	49.32	uncharacterized protein LOC111020715 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1DK35	5.6e-53	47.35	uncharacterized protein LOC111021833 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]

BLAST of Spg012128 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64260.1	1.9e-05	29.00	MuDR family transposase	[more]
AT1G49920.1	9.6e-05	25.93	MuDR family transposase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006564	Zinc finger, PMZ-type	SMART	SM00575	26again6	coord: 420..447 e-value: 1.5E-9 score: 47.8
IPR007527	Zinc finger, SWIM-type	PFAM	PF04434	SWIM	coord: 416..443 e-value: 4.9E-8 score: 32.5
IPR007527	Zinc finger, SWIM-type	PROSITE	PS50966	ZF_SWIM	coord: 413..445 score: 9.804279
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 516..533 score: 8.910993

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg012128.1	Spg012128.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding